Rorug07G0343100

Non-lysosomal glucosylceramidase that catalyzes the conversion of glucosylceramide to free glucose and ceramide

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Forward (+)
37838373 .. 37838570
198 bp
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UTR
Exon/CDS
Intron
Rorug07G0343100.1

Sequence Viewer

Length: 198 bp
ATGCAGCAACGTCTTCGACCCATTTTCCCTCGACATCTAGGACCCCTTCCAAGGCATAGGCTTTCTCGTCAACTCCTCCTCCACTTCCGGCGACACCTCCGCCTTCGCCCAGACCCGAATCTACTGGAAGGAGACCTCGGAGGCCCACATCTTCAAGGCGGACCTCCCCGGACTGAAGAAGGAAGAAGTGAAGGTTGA

Protein Analysis

65

Amino Acids

7.57

Weight (kDa)

11.85

Isoelectric Point (pI)

79.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 100, 159
AcuI CTGAAG 1 cut(s) 195
AfiI CCNNNNNNNGG 1 cut(s) 51
AgsI TTSAA 1 cut(s) 155
Alw26I GTCTC 1 cut(s) 126
AoxI GGCC 1 cut(s) 142
ApeKI GCWGC 1 cut(s) 4
AspS9I GGNCC 3 cut(s) 41, 143, 161
AsuC2I CCSGG 1 cut(s) 169
AvaII GGWCC 2 cut(s) 41, 161
BbsI GAAGAC 1 cut(s) 5
BbvI GCAGC 1 cut(s) 16
BcgI CGANNNNNNTGC 1 cut(s) 30
BcnI CCSGG 1 cut(s) 169
BcoDI GTCTC 1 cut(s) 126
BfaI CTAG 1 cut(s) 38
BisI GCNGC 1 cut(s) 5
BlsI GCNGC 1 cut(s) 6
Bme1390I CCNGG 1 cut(s) 169
Bme18I GGWCC 2 cut(s) 41, 161
BmgT120I GGNCC 3 cut(s) 41, 143, 161
BmiI GGNNCC 1 cut(s) 43
BmrFI CCNGG 1 cut(s) 169
BpiI GAAGAC 1 cut(s) 5
BpuMI CCSGG 1 cut(s) 169
BsaI GGTCTC 1 cut(s) 126
BsaJI CCNNGG 3 cut(s) 50, 136, 167
BsaXI ACNNNNNCTCC 2 cut(s) 63, 93
Bsc4I CCNNNNNNNGG 1 cut(s) 51
Bse1I ACTGG 1 cut(s) 129
BseDI CCNNGG 3 cut(s) 50, 136, 167
BseLI CCNNNNNNNGG 1 cut(s) 51
BseNI ACTGG 1 cut(s) 129
BseRI GAGGAG 2 cut(s) 65, 68
BseXI GCAGC 1 cut(s) 16
BshFI GGCC 1 cut(s) 144
BsiSI CCGG 2 cut(s) 88, 169
BslI CCNNNNNNNGG 1 cut(s) 51
BsmAI GTCTC 1 cut(s) 126
BsnI GGCC 1 cut(s) 144
Bso31I GGTCTC 1 cut(s) 126
BspACI CCGC 2 cut(s) 100, 159
BspANI GGCC 1 cut(s) 144
BspLI GGNNCC 1 cut(s) 43
BspTNI GGTCTC 1 cut(s) 126
BsrI ACTGG 1 cut(s) 129
BssECI CCNNGG 3 cut(s) 50, 136, 167
BssT1I CCWWGG 1 cut(s) 50
BstMAI GTCTC 1 cut(s) 126
BstSCI CCNGG 1 cut(s) 167
BstV1I GCAGC 1 cut(s) 16
BstV2I GAAGAC 1 cut(s) 5
BsuRI GGCC 1 cut(s) 144
Cfr13I GGNCC 3 cut(s) 41, 143, 161
CviJI RGCY 2 cut(s) 61, 144
CviKI_1 RGCY 2 cut(s) 61, 144
EciI GGCGGA 2 cut(s) 89, 174
Eco130I CCWWGG 1 cut(s) 50
Eco31I GGTCTC 1 cut(s) 126
Eco47I GGWCC 2 cut(s) 41, 161
Eco57I CTGAAG 1 cut(s) 195
EcoO109I RGGNCCY 1 cut(s) 41
EcoT14I CCWWGG 1 cut(s) 50
ErhI CCWWGG 1 cut(s) 50
FaiI YATR 1 cut(s) 57
Fnu4HI GCNGC 1 cut(s) 5
Fsp4HI GCNGC 1 cut(s) 5
FspBI CTAG 1 cut(s) 38
GluI GCNGC 1 cut(s) 5
HaeIII GGCC 1 cut(s) 144
HapII CCGG 2 cut(s) 88, 169
HincII GTYRAC 1 cut(s) 71
HindII GTYRAC 1 cut(s) 71
HinfI GANTC 1 cut(s) 118
HpaII CCGG 2 cut(s) 88, 169
Hpy166II GTNNAC 1 cut(s) 71
Hpy188I TCNGA 1 cut(s) 140
Hpy8I GTNNAC 1 cut(s) 71
HpyAV CCTTC 5 cut(s) 56, 113, 122, 173, 185
HpyCH4IV ACGT 1 cut(s) 10
HpyCH4V TGCA 1 cut(s) 4
HpySE526I ACGT 1 cut(s) 10
LpnPI CCDG 4 cut(s) 101, 110, 123, 182
Lsp1109I GCAGC 1 cut(s) 16
MaeI CTAG 1 cut(s) 38
MaeII ACGT 1 cut(s) 10
MboII GAAGA 4 cut(s) 5, 143, 188, 195
MnlI CCTC 7 cut(s) 39, 86, 89, 107, 134, 146, 174
MspI CCGG 2 cut(s) 88, 169
MspR9I CCNGG 1 cut(s) 169
NciI CCSGG 1 cut(s) 169
NlaIV GGNNCC 1 cut(s) 43
PfeI GAWTC 1 cut(s) 118
PkrI GCNGC 1 cut(s) 6
PpuMI RGGWCCY 1 cut(s) 41
Psp5II RGGWCCY 1 cut(s) 41
PspN4I GGNNCC 1 cut(s) 43
PspPI GGNCC 3 cut(s) 41, 143, 161
PspPPI RGGWCCY 1 cut(s) 41
SatI GCNGC 1 cut(s) 5
Sau96I GGNCC 3 cut(s) 41, 143, 161
ScrFI CCNGG 1 cut(s) 169
SetI ASST 5 cut(s) 13, 99, 138, 166, 196
SinI GGWCC 2 cut(s) 41, 161
SsiI CCGC 2 cut(s) 100, 159
SspMI CTAG 1 cut(s) 38
StyD4I CCNGG 1 cut(s) 167
StyI CCWWGG 1 cut(s) 50
TaiI ACGT 1 cut(s) 13
TaqI TCGA 2 cut(s) 16, 31
TfiI GAWTC 1 cut(s) 118
TseI GCWGC 1 cut(s) 4
VpaK11BI GGWCC 2 cut(s) 41, 161
XspI CTAG 1 cut(s) 38
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.