Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0005632

Physical Location & Seq

Genomic Coordinates Reverse (-)

55405973 .. 55415350

Gene Structure 9378 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG468700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2850 bp

ATGGGTGACAAGGAGATATTGGAGAATGGGTTTGCTGAAAGAGATGAACAACATTCTGAGTCTTCAATTGGCAAGGTTGACCCGGGGAAACCTGCATCACTGACGTGGCAGCGAAAATTAAACAGCAAGGGAAATGATATCGTGCAGTTCAATCTAACTTTGAAAGAAGTTATTCATTTGGCTCCAATTGGTCTTCGTCTATGGCGCCATCTACGAGAAGAAGCTGCTAAAGGAAGGGAGGCTATGATTGATCCATTTGCTAAGCGCAGTCGATCATCTAGTCATGGTGTACCACTGGGTGGTATTGGTGGAGGAAGCATCGGAAGAAGTATAAGAGGTGAGTTTCAGCGCTGGCAGCTACTCCCCAGAACATGTGAAGAGGATCCAGTTTTAGCAGATCAATTTTCTGTATTTGTTTCCCGTAGCAATGGTGAAAAGTATTCTACTGTACTCTGTCCGAGGAACCCAGAGGTCAAAGGAAACAACGCTTCAGGGATTGGATCTTGGGACTGGAATTTGAAAGGGGATAAATCTACCTATCATGCCCTTTACCCAAGGGCTTGGTCTGTTTATGAGGGTGAACCTGACCCAGCACTCAAAATAGTCTGTCGTCAAATTTCACCTATTATTCCCCATAATTACAAGGAGAGCAGCTTCCCTGTCTCAGTTTTTACTTTCACTCTATATAATTCCGGAAGTACTGCTGCAGATACCACTTTGCTTTTCACATGGGCAAATTCTGCTGGAGGGCTTTCTGAATTTTCTGGTCAACACTTTAATTCAAGAGCAGAGGTGAAGGATGGCGTGCATAGTGTACTTCTACATCACAAGAGTGCGACCGGAAAATCCCCATTGACGTTTGCAATAGCAGCAGAGCAGACTGATGGTGTTCACGTGTCAGAGTGCCCTTGCTTTGTGATATCTGGTGACTCCAAGGGTATTAGTGCTAAAGACATGTGGAATGAGATAAAACAGCATGGATCGTTTGACGGTCTTAATTCAGCTGAAACATCATTACCTTCAGAACAAGGATCGTCTATTGGGGCAGCCATTGCTGCATCTGTGACAGTACCATCAGATGGAGTACGTACTGTAACATTTTCACTGGCATGGGATTGCCCAGAAATAATTATGGGTGGAAAGACCTATTACAGGCGTTACACTAAATTCTATGGCACACGTGGGAATGGAGCTGCAAATATTGCTCATGATGCTATTCTCGAGCATCACAATTGGGAGTCCCAAGTTGAAGCATGGCAAAGACCAATTCTTGAAGATAAGAGACTTCCTGAATGGTACCCTGTTACTCTGTTCAATGAGCTATATTATCTTAATTCTGGCGGCACAATTTGGACAGATGGAGCACCTCCTGTGCATAGTTTAGCAAGTATTGGAGGAAGGAAGTTTTCCCTTGATAAGTCCTCATTAGGTTTGAAAAACATCATTGATTCACCCCTGCAAAATGATACTGCTGTTGACATTCTTGGAAGAATGACTACAATACTCGAGCAAATTCACACGCCCATGGCATCAAATTCTGCATTTGGACCAAATCTACTTCAGGAGGGAGAAGAAAACATTGGTCAATTCCTTTATCTTGAAGGAGTTGAATATCACATGTGGAACACTTACGATGTCCATTTTTACTCATCTTTTTCATTGGTCATGCTATTTCCAAAACTTGAACTCAGCATACAAAGAGACTTTGCAGCAGCAGTAATGATGCACGACCCCAGTAAGATGAGTCTTTTATGTGATGGAAAGTCGGTCCAAAGAAAGGTTCTTGGAGCTGTTCCCCATGATATTGGGATCCATGATCCATGGTTTGAAGTAAATGCTTATAATCTTTTCAATACAGATAGGTGGAAAGACTTGAATCCTAAGTTTGTTCTCCAAGTTTACAGGGATGTGGTTGCCACTGGTGATAAGAAGTTTGCAGAAGCTGTTTGGCCTTCTGTTTATGTTGCAATGGCTTATATGGAACAATTTGACCGGGATGGTGATGGTATGATTGAGAATGAAGGCTTCCCTGATCAAACGTATGATACATGGTCTGTCTCTGGTGTGAGTGCATATAGCGGTGGATTGTGGTTAGCAGCTCTGCAGGCTGCTTCAGCCATGGCAGGTGAAGTAGGTGACAAGGGTTCTGAGGATTATTTTTGGTGCAAGTTTCAGAAGGCAAAAGTGGTGTATGAAAAATTATGGAATGGATCTTACTTCAATTATGATAACAGTGGTCAAAGTGCAAGCTCATCAATTCAAGCAGATCAATTGGCCGGACAATGGTATACCAGAGCGTGTGGACTTTTGCCAATCGTTGATGAAGACAAGGCACAAAGTGCATTGGAAAAGGTTTATACTTATAATGTCTTAAAGGTGAAGGGTGGGAAACTGGGGGCTGTTAACGGGATGCTTCCTGATGGAAAGGTTGACATGACATCAATGCAGTCAAGAGAAATATGGTCAGGGGTCACATATGCTGTTGCTGCAACAATGATCCATGAAGATATGCTTGATATGGCATTTAACACTGCTGGTGGAATCTATGCAGCTGCTTGGTCTGAAGAAGGTCTTGGATACTCTTTTCAGACCCCTGAAGCTTGGAACACCAATGAGGAATTCAGATCATTAGTTTACATGCGCCCTCTGGCCATATGGGCAATGCAGTGGGCATTATCAAGACCTAAGGTTCTTAAGCAGGAGACGAGATCAGAAGTAGATCAAGTTTCTTTGCTCCGGCATGAAGCTGGATTCGCAAGAGTTGCTCAGCTTTTAAAGTTGCCGAAAGAGGAAGCATCAAGAAGCATTTTACAGGTTGTTTATGATTATACTTGCAAGAGGATGAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004348 GO:0004553 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005790 GO:0005886 GO:0006082 GO:0006629 GO:0006643 GO:0006664 GO:0006665 GO:0006687 GO:0006807 GO:0007275 GO:0007399 GO:0007417 GO:0008150 GO:0008152 GO:0008202 GO:0008206 GO:0008422 GO:0009056 GO:0009987 GO:0012505 GO:0015926 GO:0016020 GO:0016021 GO:0016137 GO:0016139 GO:0016787 GO:0016798 GO:0019752 GO:0021953 GO:0021954 GO:0022008 GO:0030154 GO:0030182 GO:0031224 GO:0032501 GO:0032502 GO:0032787 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044255 GO:0044281 GO:0044424 GO:0044425 GO:0044444 GO:0044464 GO:0048468 GO:0048666 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0071704 GO:0071944 GO:1901135 GO:1901136 GO:1901360 GO:1901564 GO:1901575 GO:1901615 GO:1901657 GO:1901658 GO:1903509

KEGG Pathways

Metabolic & Signaling

ko00511 ko00600 ko01100 map00511 map00600 map01100

Pfam Domains

Protein Families

DUF608 Glyco_hydr_116N

Protein Analysis

949

Amino Acids

105.43

Weight (kDa)

5.66

Isoelectric Point (pI)

40.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydr_116N	PF12215	96 - 412	3.7e-108	beta-glucosidase 2, glycosyl-hydrolase family 116 N-term
DUF608	PF04685	528 - 888	5.1e-165	Glycosyl-hydrolase family 116, catalytic region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0005632)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G49900 AT5G49900 AT5G49900
fragaria_vesca	FvH4_5g39140 FvH4_5g39140 FvH4_5g39140 FvH4_5g39140 FvH4_5g39140
malus_domestica	MD08G1245400.v1.1 MD15G1440400.v1.1
prunus_persica	Prupe.1G582500_v2.0.a1 Prupe.1G582500_v2.0.a1
pyrus_communis	pycom08g21280 pycom15g38820
rosa_chinensis	RchiOBHm_Chr7g0241141
rosa_laevigata	RLG00000000592
rosa_multiflora	Rmu_sc0006665.1_g000004
rosa_roxburghii	Rroxscaffold_3G00219230
rosa_rugosa	Rorug07G0343100 Rorug07G0343200 Rorug07G0343300 Rorug07G0343400.1 Rorug07G0343500.1
rosa_samantha	Rh7AG498100 Rh7BG468700 Rh7CG514800 Rh7DG482200
rosa_wichuraiana	Rw7G042010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1842, 2364
AarI	CACCTGC	1 cut(s)	2114
Acc36I	ACCTGC	2 cut(s)	100, 2114
Acc65I	GGTACC	1 cut(s)	1296
AccB1I	GGYRCC	2 cut(s)	204, 1296
AccB7I	CCANNNNNTGG	2 cut(s)	299, 1079
AccI	GTMKAC	1 cut(s)	2288
AccIII	TCCGGA	1 cut(s)	692
AciI	CCGC	2 cut(s)	1341, 2079
AcoI	YGGCCR	2 cut(s)	2274, 2649
AcsI	RAATTY	8 cut(s)	514, 615, 736, 758, 1166, 1512, 1534, 2618
AcuI	CTGAAG	6 cut(s)	474, 1005, 1544, 2097, 2583, 2616
AcvI	CACGTG	2 cut(s)	895, 1181
AcyI	GRCGYC	1 cut(s)	205
AdeI	CACNNNGTG	2 cut(s)	299, 2339
AfaI	GTAC	8 cut(s)	291, 450, 700, 816, 1071, 1086, 1090, 1298
AfeI	AGCGCT	1 cut(s)	350
AfiI	CCNNNNNNNGG	5 cut(s)	299, 1079, 1152, 1777, 2283
AflII	CTTAAG	1 cut(s)	2693
AflIII	ACRYGT	5 cut(s)	371, 894, 954, 1178, 1617
AjiI	CACGTC	1 cut(s)	105
AjuI	GAANNNNNNNTTGG	8 cut(s)	1563, 1595, 1764, 1796, 2556, 2588, 2603, 2635
AleI	CACNNNNGTG	2 cut(s)	103, 831
Alw21I	GWGCWC	1 cut(s)	1366
Alw26I	GTCTC	5 cut(s)	667, 1276, 1695, 2062, 2696
AlwNI	CAGNNNCTG	1 cut(s)	1943
Ama87I	CYCGRG	3 cut(s)	82, 1220, 1505
Aor13HI	TCCGGA	1 cut(s)	692
Aor51HI	AGCGCT	1 cut(s)	350
AoxI	GGCC	3 cut(s)	1949, 2274, 2649
ApoI	RAATTY	8 cut(s)	514, 615, 736, 758, 1166, 1512, 1534, 2618
Asp700I	GAANNNNTTC	1 cut(s)	171
Asp718I	GGTACC	1 cut(s)	1296
AspLEI	GCGC	4 cut(s)	207, 267, 351, 2643
AspS9I	GGNCC	2 cut(s)	1547, 1768
AsuC2I	CCSGG	3 cut(s)	83, 84, 1994
AvaI	CYCGRG	3 cut(s)	82, 1220, 1505
AvaII	GGWCC	2 cut(s)	1547, 1768
AxyI	CCTNAGG	1 cut(s)	2685
BaeGI	GKGCMC	1 cut(s)	908
BaeI	ACNNNNGTAYC	2 cut(s)	1458, 1491
BalI	TGGCCA	1 cut(s)	2651
BamHI	GGATCC	2 cut(s)	382, 1809
BanI	GGYRCC	2 cut(s)	204, 1296
BarI	GAAGNNNNNNTAC	2 cut(s)	1480, 1512
BbrPI	CACGTG	2 cut(s)	895, 1181
BbsI	GAAGAC	3 cut(s)	54, 185, 2331
Bbv12I	GWGCWC	1 cut(s)	1366
BciVI	GTATCC	1 cut(s)	2570
BclI	TGATCA	1 cut(s)	2032
BcnI	CCSGG	3 cut(s)	83, 84, 1994
BcoDI	GTCTC	5 cut(s)	667, 1276, 1695, 2062, 2696
BfaI	CTAG	1 cut(s)	279
BfmI	CTRYAG	2 cut(s)	705, 2102
BfoI	RGCGCY	2 cut(s)	208, 352
BfrI	CTTAAG	1 cut(s)	2693
BfuAI	ACCTGC	2 cut(s)	100, 2114
BfuI	GTATCC	1 cut(s)	2570
BglI	GCCNNNNNGGC	1 cut(s)	2657
BlpI	GCTNAGC	2 cut(s)	261, 2766
BmcAI	AGTACT	1 cut(s)	700
Bme1390I	CCNGG	3 cut(s)	83, 84, 1994
Bme18I	GGWCC	2 cut(s)	1547, 1768
BmeT110I	CYCGRG	3 cut(s)	82, 1220, 1505
BmgBI	CACGTC	1 cut(s)	105
BmgT120I	GGNCC	2 cut(s)	1547, 1768
BmiI	GGNNCC	6 cut(s)	183, 206, 384, 464, 1298, 1811
BmrFI	CCNGG	3 cut(s)	83, 84, 1994
BmrI	ACTGGG	3 cut(s)	305, 1728, 2402
BmsI	GCATC	9 cut(s)	104, 327, 1067, 1201, 1234, 1538, 1713, 2400, 2804
BmuI	ACTGGG	3 cut(s)	305, 1728, 2402
BpiI	GAAGAC	3 cut(s)	54, 185, 2331
BpmI	CTGGAG	1 cut(s)	765
Bpu1102I	GCTNAGC	2 cut(s)	261, 2766
BpuMI	CCSGG	3 cut(s)	83, 84, 1994
BsaAI	YACGTR	3 cut(s)	895, 1088, 1181
BsaHI	GRCGYC	1 cut(s)	205
BsaJI	CCNNGG	8 cut(s)	82, 83, 458, 554, 933, 1524, 1820, 2118
BsaWI	WCCGGW	2 cut(s)	692, 839
BsaXI	ACNNNNNCTCC	2 cut(s)	14, 44
Bsc4I	CCNNNNNNNGG	5 cut(s)	299, 1079, 1152, 1777, 2283
Bse1I	ACTGG	7 cut(s)	300, 386, 515, 1110, 1734, 1924, 2397
Bse21I	CCTNAGG	1 cut(s)	2685
Bse3DI	GCAATG	4 cut(s)	433, 1050, 1974, 2667
BseAI	TCCGGA	1 cut(s)	692
BseDI	CCNNGG	8 cut(s)	82, 83, 458, 554, 933, 1524, 1820, 2118
BseGI	GGATG	5 cut(s)	805, 1912, 2002, 2415, 2847
BseLI	CCNNNNNNNGG	5 cut(s)	299, 1079, 1152, 1777, 2283
BseMI	GCAATG	4 cut(s)	433, 1050, 1974, 2667
BseMII	CTCAG	5 cut(s)	48, 678, 1702, 2139, 2780
BseNI	ACTGG	7 cut(s)	300, 386, 515, 1110, 1734, 1924, 2397
BseSI	GKGCMC	1 cut(s)	908
BseYI	CCCAGC	1 cut(s)	589
BsgI	GTGCAG	1 cut(s)	164
Bsh1285I	CGRYCG	1 cut(s)	840
BshFI	GGCC	3 cut(s)	1951, 2276, 2651
BshNI	GGYRCC	2 cut(s)	204, 1296
BsiEI	CGRYCG	1 cut(s)	840
BsiHKAI	GWGCWC	1 cut(s)	1366
BsiHKCI	CYCGRG	3 cut(s)	82, 1220, 1505
BsiSI	CCGG	6 cut(s)	83, 693, 840, 1993, 2277, 2737
BslFI	GGGAC	2 cut(s)	521, 1225
BslI	CCNNNNNNNGG	5 cut(s)	299, 1079, 1152, 1777, 2283
BsmAI	GTCTC	5 cut(s)	667, 1276, 1695, 2062, 2696
BsmBI	CGTCTC	1 cut(s)	2696
BsmFI	GGGAC	2 cut(s)	521, 1225
BsnI	GGCC	3 cut(s)	1951, 2276, 2651
BsoBI	CYCGRG	3 cut(s)	82, 1220, 1505
Bsp1286I	GDGCHC	2 cut(s)	908, 1366
Bsp13I	TCCGGA	1 cut(s)	692
Bsp1720I	GCTNAGC	2 cut(s)	261, 2766
Bsp19I	CCATGG	3 cut(s)	1524, 1820, 2118
BspACI	CCGC	2 cut(s)	1341, 2079
BspANI	GGCC	3 cut(s)	1951, 2276, 2651
BspCNI	CTCAG	5 cut(s)	49, 677, 1701, 2140, 2779
BspEI	TCCGGA	1 cut(s)	692
BspHI	TCATGA	1 cut(s)	1207
BspLI	GGNNCC	6 cut(s)	183, 206, 384, 464, 1298, 1811
BspMAI	CTGCAG	2 cut(s)	709, 2106
BspMI	ACCTGC	2 cut(s)	100, 2114
BspT107I	GGYRCC	2 cut(s)	204, 1296
BspTI	CTTAAG	1 cut(s)	2693
BsrDI	GCAATG	4 cut(s)	433, 1050, 1974, 2667
BsrI	ACTGG	7 cut(s)	300, 386, 515, 1110, 1734, 1924, 2397
BssECI	CCNNGG	8 cut(s)	82, 83, 458, 554, 933, 1524, 1820, 2118
BssNAI	GTATAC	1 cut(s)	2289
BssNI	GRCGYC	1 cut(s)	205
BssT1I	CCWWGG	5 cut(s)	554, 933, 1524, 1820, 2118
Bst1107I	GTATAC	1 cut(s)	2289
Bst4CI	ACNGT	5 cut(s)	448, 992, 1069, 1093, 2234
Bst6I	CTCTTC	1 cut(s)	372
BstACI	GRCGYC	1 cut(s)	205
BstAFI	CTTAAG	1 cut(s)	2693
BstAPI	GCANNNNNTGC	5 cut(s)	740, 1052, 1202, 2339, 2762
BstBAI	YACGTR	3 cut(s)	895, 1088, 1181
BstC8I	GCNNGC	4 cut(s)	353, 806, 2106, 2248
BstDEI	CTNAG	8 cut(s)	57, 261, 664, 1688, 1881, 2148, 2685, 2766
BstDSI	CCRYGG	3 cut(s)	1524, 1820, 2118
BstENI	CCTNNNNNAGG	1 cut(s)	1150
BstF5I	GGATG	5 cut(s)	805, 1912, 2002, 2415, 2847
BstH2I	RGCGCY	2 cut(s)	208, 352
BstHHI	GCGC	4 cut(s)	207, 267, 351, 2643
BstMAI	GTCTC	5 cut(s)	667, 1276, 1695, 2062, 2696
BstMCI	CGRYCG	1 cut(s)	840
BstNSI	RCATGY	4 cut(s)	375, 958, 1621, 2641
BstSCI	CCNGG	3 cut(s)	81, 82, 1992
BstSFI	CTRYAG	2 cut(s)	705, 2102
BstSLI	GKGCMC	1 cut(s)	908
BstSNI	TACGTA	1 cut(s)	1088
BstV2I	GAAGAC	3 cut(s)	54, 185, 2331
BstX2I	RGATCY	4 cut(s)	382, 500, 1809, 2210
BstXI	CCANNNNNNTGG	2 cut(s)	561, 1805
BstYI	RGATCY	4 cut(s)	382, 500, 1809, 2210
BstZ17I	GTATAC	1 cut(s)	2289
Bsu36I	CCTNAGG	1 cut(s)	2685
BsuI	GTATCC	1 cut(s)	2570
BsuRI	GGCC	3 cut(s)	1951, 2276, 2651
BtgI	CCRYGG	3 cut(s)	1524, 1820, 2118
BtrI	CACGTC	1 cut(s)	105
BtsCI	GGATG	5 cut(s)	805, 1912, 2002, 2415, 2847
BtsI	GCAGTG	2 cut(s)	2529, 2672
BtsIMutI	CAGTG	7 cut(s)	98, 293, 1103, 1917, 2239, 2529, 2672
BveI	ACCTGC	2 cut(s)	100, 2114
Cac8I	GCNNGC	4 cut(s)	353, 806, 2106, 2248
CaiI	CAGNNNCTG	1 cut(s)	1943
CciI	TCATGA	1 cut(s)	1207
CfoI	GCGC	4 cut(s)	207, 267, 351, 2643
Cfr13I	GGNCC	2 cut(s)	1547, 1768
Cfr9I	CCCGGG	1 cut(s)	82
Csp6I	GTAC	8 cut(s)	290, 449, 699, 815, 1070, 1085, 1089, 1297
CviQI	GTAC	8 cut(s)	290, 449, 699, 815, 1070, 1085, 1089, 1297
DdeI	CTNAG	8 cut(s)	57, 261, 664, 1688, 1881, 2148, 2685, 2766
DinI	GGCGCC	1 cut(s)	206
DraI	TTTAAA	1 cut(s)	2775
DraIII	CACNNNGTG	2 cut(s)	299, 2339
EaeI	YGGCCR	2 cut(s)	2274, 2649
Eam1104I	CTCTTC	1 cut(s)	372
EarI	CTCTTC	1 cut(s)	372
Eco105I	TACGTA	1 cut(s)	1088
Eco130I	CCWWGG	5 cut(s)	554, 933, 1524, 1820, 2118
Eco32I	GATATC	2 cut(s)	139, 921
Eco47I	GGWCC	2 cut(s)	1547, 1768
Eco47III	AGCGCT	1 cut(s)	350
Eco57I	CTGAAG	6 cut(s)	474, 1005, 1544, 2097, 2583, 2616
Eco72I	CACGTG	2 cut(s)	895, 1181
Eco81I	CCTNAGG	1 cut(s)	2685
Eco88I	CYCGRG	3 cut(s)	82, 1220, 1505
EcoNI	CCTNNNNNAGG	1 cut(s)	1150
EcoRI	GAATTC	1 cut(s)	2618
EcoRV	GATATC	2 cut(s)	139, 921
EcoT14I	CCWWGG	5 cut(s)	554, 933, 1524, 1820, 2118
EgeI	GGCGCC	1 cut(s)	206
EheI	GGCGCC	1 cut(s)	206
ErhI	CCWWGG	5 cut(s)	554, 933, 1524, 1820, 2118
Esp3I	CGTCTC	1 cut(s)	2696
FalI	AAGNNNNNCTT	4 cut(s)	2496, 2528, 2556, 2588
FaqI	GGGAC	2 cut(s)	521, 1225
FauNDI	CATATG	2 cut(s)	2476, 2654
FbaI	TGATCA	1 cut(s)	2032
FblI	GTMKAC	1 cut(s)	2288
FokI	GGATG	4 cut(s)	812, 1919, 2009, 2422
FspBI	CTAG	1 cut(s)	279
GlaI	GCGC	4 cut(s)	206, 266, 350, 2642
GsaI	CCCAGC	1 cut(s)	593
GsuI	CTGGAG	1 cut(s)	765
HaeII	RGCGCY	2 cut(s)	208, 352
HaeIII	GGCC	3 cut(s)	1951, 2276, 2651
HapII	CCGG	6 cut(s)	83, 693, 840, 1993, 2277, 2737
HhaI	GCGC	4 cut(s)	207, 267, 351, 2643
Hin1I	GRCGYC	1 cut(s)	205
Hin6I	GCGC	4 cut(s)	205, 265, 349, 2641
HinP1I	GCGC	4 cut(s)	205, 265, 349, 2641
HincII	GTYRAC	5 cut(s)	79, 770, 1477, 2404, 2431
HindII	GTYRAC	5 cut(s)	79, 770, 1477, 2404, 2431
HindIII	AAGCTT	1 cut(s)	2598
HinfI	GANTC	8 cut(s)	59, 929, 1238, 1448, 1744, 1876, 2541, 2751
HpaI	GTTAAC	1 cut(s)	2404
HpaII	CCGG	6 cut(s)	83, 693, 840, 1993, 2277, 2737
HpyCH4III	ACNGT	5 cut(s)	448, 992, 1069, 1093, 2234
HpyCH4IV	ACGT	6 cut(s)	104, 857, 894, 1087, 1180, 2039
HpyF3I	CTNAG	8 cut(s)	57, 261, 664, 1688, 1881, 2148, 2685, 2766
HpySE526I	ACGT	6 cut(s)	104, 857, 894, 1087, 1180, 2039
Hsp92I	GRCGYC	1 cut(s)	205
HspAI	GCGC	4 cut(s)	205, 265, 349, 2641
KasI	GGCGCC	1 cut(s)	204
Kpn2I	TCCGGA	1 cut(s)	692
KpnI	GGTACC	1 cut(s)	1300
Ksp22I	TGATCA	1 cut(s)	2032
KspAI	GTTAAC	1 cut(s)	2404
LmnI	GCTCC	5 cut(s)	187, 1190, 1361, 1787, 2739
LweI	GCATC	9 cut(s)	104, 327, 1067, 1201, 1234, 1538, 1713, 2400, 2804
MaeI	CTAG	1 cut(s)	279
MaeII	ACGT	6 cut(s)	104, 857, 894, 1087, 1180, 2039
MaeIII	GTNAC	8 cut(s)	5, 926, 1063, 1093, 1157, 1303, 2135, 2470
MfeI	CAATTG	4 cut(s)	66, 186, 1231, 2270
MflI	RGATCY	4 cut(s)	382, 500, 1809, 2210
MhlI	GDGCHC	2 cut(s)	908, 1366
MlsI	TGGCCA	1 cut(s)	2651
MluNI	TGGCCA	1 cut(s)	2651
Mly113I	GGCGCC	1 cut(s)	205
MlyI	GAGTC	4 cut(s)	68, 923, 1247, 1753
Mox20I	TGGCCA	1 cut(s)	2651
MroI	TCCGGA	1 cut(s)	692
MroXI	GAANNNNTTC	1 cut(s)	171
MscI	TGGCCA	1 cut(s)	2651
MseI	TTAA	9 cut(s)	119, 777, 996, 1332, 2372, 2403, 2526, 2694, 2774
MslI	CAYNNNNRTG	4 cut(s)	103, 831, 1108, 1523
Msp20I	TGGCCA	1 cut(s)	2651
MspA1I	CMGCKG	2 cut(s)	1004, 2552
MspCI	CTTAAG	1 cut(s)	2693
MspI	CCGG	6 cut(s)	83, 693, 840, 1993, 2277, 2737
MspR9I	CCNGG	3 cut(s)	83, 84, 1994
MunI	CAATTG	4 cut(s)	66, 186, 1231, 2270
NarI	GGCGCC	1 cut(s)	205
NciI	CCSGG	3 cut(s)	83, 84, 1994
NcoI	CCATGG	3 cut(s)	1524, 1820, 2118
NdeI	CATATG	2 cut(s)	2476, 2654
NlaIV	GGNNCC	6 cut(s)	183, 206, 384, 464, 1298, 1811
NmuCI	GTSAC	5 cut(s)	5, 926, 1063, 2135, 2470
NspI	RCATGY	4 cut(s)	375, 958, 1621, 2641
OliI	CACNNNNGTG	2 cut(s)	103, 831
PaeR7I	CTCGAG	2 cut(s)	1220, 1505
PagI	TCATGA	1 cut(s)	1207
PaqCI	CACCTGC	1 cut(s)	2114
PciI	ACATGT	3 cut(s)	371, 954, 1617
PdmI	GAANNNNTTC	1 cut(s)	171
PfeI	GAWTC	4 cut(s)	1448, 1876, 2541, 2751
PflMI	CCANNNNNTGG	2 cut(s)	299, 1079
PleI	GAGTC	4 cut(s)	67, 923, 1246, 1752
PluTI	GGCGCC	1 cut(s)	208
PmaCI	CACGTG	2 cut(s)	895, 1181
PmlI	CACGTG	2 cut(s)	895, 1181
PpsI	GAGTC	4 cut(s)	67, 923, 1246, 1752
Ppu21I	YACGTR	3 cut(s)	895, 1088, 1181
PscI	ACATGT	3 cut(s)	371, 954, 1617
PsiI	TTATAA	2 cut(s)	1842, 2364
PspCI	CACGTG	2 cut(s)	895, 1181
PspFI	CCCAGC	1 cut(s)	589
PspN4I	GGNNCC	6 cut(s)	183, 206, 384, 464, 1298, 1811
PspPI	GGNCC	2 cut(s)	1547, 1768
PspXI	VCTCGAGB	1 cut(s)	1505
PsrI	GAACNNNNNNTAC	2 cut(s)	1677, 1709
PstI	CTGCAG	2 cut(s)	709, 2106
PstNI	CAGNNNCTG	1 cut(s)	1943
PsuI	RGATCY	4 cut(s)	382, 500, 1809, 2210
PvuII	CAGCTG	2 cut(s)	1004, 2552
RsaI	GTAC	8 cut(s)	291, 450, 700, 816, 1071, 1086, 1090, 1298
RsaNI	GTAC	8 cut(s)	290, 449, 699, 815, 1070, 1085, 1089, 1297
RseI	CAYNNNNRTG	4 cut(s)	103, 831, 1108, 1523
SaqAI	TTAA	9 cut(s)	119, 777, 996, 1332, 2372, 2403, 2526, 2694, 2774
Sau96I	GGNCC	2 cut(s)	1547, 1768
ScaI	AGTACT	1 cut(s)	700
SchI	GAGTC	4 cut(s)	68, 923, 1247, 1753
ScrFI	CCNGG	3 cut(s)	83, 84, 1994
SduI	GDGCHC	2 cut(s)	908, 1366
SfaNI	GCATC	9 cut(s)	104, 327, 1067, 1201, 1234, 1538, 1713, 2400, 2804
SfcI	CTRYAG	2 cut(s)	705, 2102
SfoI	GGCGCC	1 cut(s)	206
Sfr274I	CTCGAG	2 cut(s)	1220, 1505
SinI	GGWCC	2 cut(s)	1547, 1768
SlaI	CTCGAG	2 cut(s)	1220, 1505
SmaI	CCCGGG	1 cut(s)	84
SmiMI	CAYNNNNRTG	4 cut(s)	103, 831, 1108, 1523
SmlI	CTYRAG	3 cut(s)	1220, 1505, 2693
SmoI	CTYRAG	3 cut(s)	1220, 1505, 2693
SnaBI	TACGTA	1 cut(s)	1088
SsiI	CCGC	2 cut(s)	1341, 2079
SspDI	GGCGCC	1 cut(s)	204
SspI	AATATT	1 cut(s)	1201
SspMI	CTAG	1 cut(s)	279
StyD4I	CCNGG	3 cut(s)	81, 82, 1992
StyI	CCWWGG	5 cut(s)	554, 933, 1524, 1820, 2118
TaaI	ACNGT	5 cut(s)	448, 992, 1069, 1093, 2234
TaiI	ACGT	6 cut(s)	107, 860, 897, 1090, 1183, 2042
TaqI	TCGA	3 cut(s)	271, 1221, 1506
TaqII	GACCGA	1 cut(s)	1756
TatI	WGTACW	3 cut(s)	448, 698, 814
TauI	GCSGC	1 cut(s)	1344
TfiI	GAWTC	4 cut(s)	1448, 1876, 2541, 2751
Tru1I	TTAA	9 cut(s)	119, 777, 996, 1332, 2372, 2403, 2526, 2694, 2774
Tru9I	TTAA	9 cut(s)	119, 777, 996, 1332, 2372, 2403, 2526, 2694, 2774
TscAI	CASTG	7 cut(s)	105, 300, 1110, 1924, 2239, 2536, 2672
TseFI	GTSAC	5 cut(s)	5, 926, 1063, 2135, 2470
Tsp45I	GTSAC	5 cut(s)	5, 926, 1063, 2135, 2470
TspDTI	ATGAA	8 cut(s)	60, 164, 1647, 2034, 2208, 2337, 2517, 2757
TspMI	CCCGGG	1 cut(s)	82
TspRI	CASTG	7 cut(s)	105, 300, 1110, 1924, 2239, 2536, 2672
Van91I	CCANNNNNTGG	2 cut(s)	299, 1079
Vha464I	CTTAAG	1 cut(s)	2693
VpaK11BI	GGWCC	2 cut(s)	1547, 1768
XagI	CCTNNNNNAGG	1 cut(s)	1150
XapI	RAATTY	8 cut(s)	514, 615, 736, 758, 1166, 1512, 1534, 2618
XceI	RCATGY	4 cut(s)	375, 958, 1621, 2641
XhoI	CTCGAG	2 cut(s)	1220, 1505
XmaI	CCCGGG	1 cut(s)	82
XmiI	GTMKAC	1 cut(s)	2288
XmnI	GAANNNNTTC	1 cut(s)	171
XspI	CTAG	1 cut(s)	279
ZrmI	AGTACT	1 cut(s)	700

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.