pycom15g38820

Non-lysosomal glucosylceramidase that catalyzes the conversion of glucosylceramide to free glucose and ceramide

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Forward (+)
38567712 .. 38571577
3866 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g38820.5

Sequence Viewer

Length: 1902 bp
ATGTGGAGTGAGATAAAAGAGCATGGATCCTTTGATTGTCTTAATTCTGCAGAAATGCCATTACCTTCAGAACCCGGATCATCTATTGGGGCAGCCATTGCTGCGTCTGTGGCAGTTCCATCTGGTGAAGTACGTACTGTAACATTTTCATTGGCATGGGATTGCCCAGAAGCAAAATTTAGGGGTGGGAAGGCGTATCACAGGCGGTACACTAAATTTTATGGAACACATGGGGAAGCTGCTGCAAATATTGCTCATGATGCCATTCTTGAGCATCGCCATTGGGAATCCCAGATTGAAGCATGGCAAAGACCAGTTCTTGAGGACAAGAGACTTCCAGAATGGTACCCTGTCACTCTGTTCAATGAGCTATACTTTCTAAATTCCGGGGGCACAGTTTGGACAGATGGATCACCTCCGGTCCATAGCTTAAGAAGTATTATAGAAAGGAAGTTTTCCCTTGATAAGTCCTCATTAGGTTTGAAAAGCGTCATTAATGCACCCGAACAAAATGATACTGCTATCGACATTCTTGGAAGGATGACATCAACACTTGAGCAAGTTCACACGCCCATAGCAGCAAACTCTGCATTTGGAACAAATCTCCTTCAGGAGGGAGAAGAAAACATTGGTCAATTCCTTTATCTTGAAGGAATTGAATATCAGATGTGGAATACTTATGATGTCCATTTCTACTCATCTTTTGCACTAGTCATGCTATTTCCAAAACTTCAACTCAGCATCCAACGAGACTTTGCAGCAGCAGTAATGATGCATGACCCCAGCAAGATGAGACTTCTCTGTGATGGAAGATGGGTCCAAAGAAAGGTTCTTGGAGCTGTTCCTCATGATATCGGCCTCCATGACCCCTGGTTTGAAGTAAATGCTTATAACCTGTATAACACAGATAGGTGGAAAGACTTGAATCCCAAGTTTGTTCTCCAAGTTTACAGGGATGTGGTTGCCACGGGTGATAAGAAGTTTGCAGAAGCCGTTTGGCCCGCTGTTTATGTTGCAATGGCTTATATGGAACAATTTGATAAAGATGGAGATGGAATGATTGAGAATGATGGCTTCCCAGATCAGACTTATGATACGTGGTCAGTCTATGGTGTGAGTGCATATAGTGGTGGGCTGTGGGTAGCAGCATTGCAGGCTGCATCAGGCATGGCACGAGAAGTAGGTGACAAGGGTTCAGAAGTTTATTTTTGGCAAAAGTTTCAGAAGGCAAAAGCCGTTTATGCGAAATTATGGAATGGATCATACTTTAATTATGACAACAGTGGTCAAGCTTCTAGTTCATCAATTCAAACTGATCAACTGGCCGGACAATGGTATGCCAGAGCATGCGGTCTTTTGCCAATTGTTGACGAAGACAAGGCACGAAGTGCACTGGAAAAGATTTATAATTACAATGTCCTAAAGTTTAAGGATGGAAGACGAGGGGCTGTTAACGGGATGCTACCTAATGGAAAGGTTGACATGTCAACATTGCAGTCAAGAGAAATATGGTCCGGAGTTACATACGCTGTAGCTGCATCGATGATTCAGGAAGATGCAATTGATATGGGATTTCATACTGCGGAGGGAATTTATGAAGCTGGATGGTCCAAAGAAGGACTTGGATACTCTTTTCAGACTCCTGAAGCTTGGACCACCAGCGGCGAATACAGATCTTTAGCTTACATGCGCCCTCTGGCGATTTGGTCAATGCAGTGGGCTTTAACAAAACCACCGCTGTTCAAGCAGGAGACGGAATTAGAAGTGGATGAAGTTATTTTGCTTAGGCACAAGGCTGGATTCTCGAAAGTGGCTCAGCTTCTAAAGTTGCCACCAGAGGAATCATCAAGAAGTATTTTGCAGACTGTTTTCGATTATACCTGCAAGAGGATGTGGCTGTGA

Protein Analysis

634

Amino Acids

71.41

Weight (kDa)

5.39

Isoelectric Point (pI)

45.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 891, 1407
Acc36I ACCTGC 1 cut(s) 1889
Acc65I GGTACC 1 cut(s) 345
AccB1I GGYRCC 1 cut(s) 345
AccIII TCCGGA 1 cut(s) 1514
AciI CCGC 6 cut(s) 205, 1002, 1350, 1583, 1662, 1736
AclWI GGATC 5 cut(s) 21, 34, 85, 418, 1267
AcoI YGGCCR 1 cut(s) 1323
AcsI RAATTY 4 cut(s) 176, 215, 382, 1590
AcuI CTGAAG 3 cut(s) 51, 593, 1665
AdeI CACNNNGTG 1 cut(s) 1388
AfaI GTAC 4 cut(s) 132, 136, 209, 347
AfiI CCNNNNNNNGG 4 cut(s) 613, 826, 1332, 1887
AflII CTTAAG 1 cut(s) 430
AflIII ACRYGT 1 cut(s) 1482
AhlI ACTAGT 1 cut(s) 709
AjnI CCWGG 1 cut(s) 869
AjuI GAANNNNNNNTTGG 4 cut(s) 612, 644, 813, 845
Alw21I GWGCWC 1 cut(s) 1393
Alw26I GTCTC 4 cut(s) 325, 744, 787, 1745
Alw44I GTGCAC 1 cut(s) 1389
AlwI GGATC 5 cut(s) 21, 34, 85, 418, 1267
Aor13HI TCCGGA 1 cut(s) 1514
AoxI GGCC 3 cut(s) 856, 998, 1323
ApaLI GTGCAC 1 cut(s) 1389
ApoI RAATTY 4 cut(s) 176, 215, 382, 1590
ArsI GACNNNNNNTTYG 2 cut(s) 857, 889
AseI ATTAAT 1 cut(s) 495
Asp718I GGTACC 1 cut(s) 345
AspLEI GCGC 1 cut(s) 1692
AspS9I GGNCC 6 cut(s) 421, 817, 999, 1512, 1608, 1653
AsuC2I CCSGG 2 cut(s) 75, 388
AsuHPI GGTGA 4 cut(s) 137, 405, 983, 1196
AvaII GGWCC 5 cut(s) 421, 817, 1512, 1608, 1653
BaeGI GKGCMC 2 cut(s) 395, 1393
BamHI GGATCC 1 cut(s) 26
BanI GGYRCC 1 cut(s) 345
BauI CACGAG 1 cut(s) 1173
BbsI GAAGAC 2 cut(s) 1380, 1444
Bbv12I GWGCWC 1 cut(s) 1393
BccI CCATC 9 cut(s) 127, 401, 800, 807, 1040, 1046, 1064, 1427, 1599
BceAI ACGGC 2 cut(s) 977, 1220
BciT130I CCWGG 1 cut(s) 871
BciVI GTATCC 1 cut(s) 1619
BclI TGATCA 1 cut(s) 1315
BcnI CCSGG 2 cut(s) 75, 388
BcoDI GTCTC 4 cut(s) 325, 744, 787, 1745
BcuI ACTAGT 1 cut(s) 709
BfaI CTAG 2 cut(s) 710, 1296
BfmI CTRYAG 2 cut(s) 48, 1530
BfrI CTTAAG 1 cut(s) 430
BfuAI ACCTGC 1 cut(s) 1889
BfuI GTATCC 1 cut(s) 1619
BglII AGATCT 1 cut(s) 1673
BlpI GCTNAGC 1 cut(s) 1815
Bme1390I CCNGG 3 cut(s) 75, 388, 871
Bme18I GGWCC 5 cut(s) 421, 817, 1512, 1608, 1653
BmgT120I GGNCC 6 cut(s) 421, 817, 999, 1512, 1608, 1653
BmiI GGNNCC 3 cut(s) 28, 347, 818
BmrFI CCNGG 3 cut(s) 75, 388, 871
BmsI GCATC 8 cut(s) 250, 283, 750, 762, 1169, 1449, 1546, 1547
BpiI GAAGAC 2 cut(s) 1380, 1444
Bpu10I CCTNAGC 1 cut(s) 1784
Bpu1102I GCTNAGC 1 cut(s) 1815
BpuEI CTTGAG 3 cut(s) 290, 341, 575
BpuMI CCSGG 2 cut(s) 75, 388
Bsa29I ATCGAT 1 cut(s) 1541
BsaAI YACGTR 2 cut(s) 134, 1098
BsaJI CCNNGG 3 cut(s) 387, 869, 966
BsaWI WCCGGW 2 cut(s) 418, 1514
Bsc4I CCNNNNNNNGG 4 cut(s) 613, 826, 1332, 1887
Bse1I ACTGG 3 cut(s) 314, 1326, 1398
Bse3DI GCAATG 4 cut(s) 96, 1023, 1148, 1490
BseAI TCCGGA 1 cut(s) 1514
BseBI CCWGG 1 cut(s) 871
BseCI ATCGAT 1 cut(s) 1541
BseDI CCNNGG 3 cut(s) 387, 869, 966
BseGI GGATG 8 cut(s) 546, 741, 961, 1438, 1464, 1610, 1774, 1896
BseLI CCNNNNNNNGG 4 cut(s) 613, 826, 1332, 1887
BseMI GCAATG 4 cut(s) 96, 1023, 1148, 1490
BseMII CTCAG 2 cut(s) 751, 1829
BseNI ACTGG 3 cut(s) 314, 1326, 1398
BseSI GKGCMC 2 cut(s) 395, 1393
BseYI CCCAGC 1 cut(s) 782
BshFI GGCC 3 cut(s) 858, 1000, 1325
BshNI GGYRCC 1 cut(s) 345
BshVI ATCGAT 1 cut(s) 1541
BsiHKAI GWGCWC 1 cut(s) 1393
BsiSI CCGG 5 cut(s) 75, 387, 419, 1326, 1515
BslI CCNNNNNNNGG 4 cut(s) 613, 826, 1332, 1887
BsmAI GTCTC 4 cut(s) 325, 744, 787, 1745
BsmBI CGTCTC 1 cut(s) 1745
BsnI GGCC 3 cut(s) 858, 1000, 1325
Bsp1286I GDGCHC 2 cut(s) 395, 1393
Bsp13I TCCGGA 1 cut(s) 1514
Bsp143I GATC 7 cut(s) 26, 77, 410, 1081, 1259, 1315, 1673
Bsp1720I GCTNAGC 1 cut(s) 1815
BspACI CCGC 6 cut(s) 205, 1002, 1350, 1583, 1662, 1736
BspANI GGCC 3 cut(s) 858, 1000, 1325
BspCNI CTCAG 2 cut(s) 750, 1828
BspDI ATCGAT 1 cut(s) 1541
BspEI TCCGGA 1 cut(s) 1514
BspHI TCATGA 2 cut(s) 256, 847
BspLI GGNNCC 3 cut(s) 28, 347, 818
BspMAI CTGCAG 1 cut(s) 52
BspMI ACCTGC 1 cut(s) 1889
BspPI GGATC 5 cut(s) 21, 34, 85, 418, 1267
BspT107I GGYRCC 1 cut(s) 345
BspTI CTTAAG 1 cut(s) 430
BsrDI GCAATG 4 cut(s) 96, 1023, 1148, 1490
BsrI ACTGG 3 cut(s) 314, 1326, 1398
BssECI CCNNGG 3 cut(s) 387, 869, 966
BssMI GATC 7 cut(s) 26, 77, 410, 1081, 1259, 1315, 1673
BssSI CACGAG 1 cut(s) 1173
Bst2BI CACGAG 1 cut(s) 1173
Bst2UI CCWGG 1 cut(s) 871
Bst4CI ACNGT 4 cut(s) 139, 397, 1283, 1867
BstAFI CTTAAG 1 cut(s) 430
BstAPI GCANNNNNTGC 4 cut(s) 98, 251, 587, 1388
BstBAI YACGTR 2 cut(s) 134, 1098
BstC8I GCNNGC 3 cut(s) 1002, 1155, 1348
BstDEI CTNAG 3 cut(s) 737, 1784, 1815
BstDSI CCRYGG 1 cut(s) 966
BstENI CCTNNNNNAGG 2 cut(s) 611, 1885
BstF5I GGATG 8 cut(s) 546, 741, 961, 1438, 1464, 1610, 1774, 1896
BstHHI GCGC 1 cut(s) 1692
BstKTI GATC 7 cut(s) 29, 80, 413, 1084, 1262, 1318, 1676
BstMAI GTCTC 4 cut(s) 325, 744, 787, 1745
BstMBI GATC 7 cut(s) 26, 77, 410, 1081, 1259, 1315, 1673
BstNI CCWGG 1 cut(s) 871
BstNSI RCATGY 3 cut(s) 1350, 1486, 1690
BstSCI CCNGG 3 cut(s) 73, 386, 869
BstSFI CTRYAG 2 cut(s) 48, 1530
BstSLI GKGCMC 2 cut(s) 395, 1393
BstSNI TACGTA 1 cut(s) 134
BstV2I GAAGAC 2 cut(s) 1380, 1444
BstX2I RGATCY 2 cut(s) 26, 1673
BstYI RGATCY 2 cut(s) 26, 1673
Bsu15I ATCGAT 1 cut(s) 1541
BsuI GTATCC 1 cut(s) 1619
BsuRI GGCC 3 cut(s) 858, 1000, 1325
BsuTUI ATCGAT 1 cut(s) 1541
BtgI CCRYGG 1 cut(s) 966
BtgZI GCGATG 1 cut(s) 260
BtsCI GGATG 8 cut(s) 546, 741, 961, 1438, 1464, 1610, 1774, 1896
BtsI GCAGTG 1 cut(s) 1721
BtsIMutI CAGTG 3 cut(s) 1288, 1391, 1721
BveI ACCTGC 1 cut(s) 1889
Cac8I GCNNGC 3 cut(s) 1002, 1155, 1348
CciI TCATGA 2 cut(s) 256, 847
CfoI GCGC 1 cut(s) 1692
Cfr13I GGNCC 6 cut(s) 421, 817, 999, 1512, 1608, 1653
ClaI ATCGAT 1 cut(s) 1541
CseI GACGC 2 cut(s) 93, 478
Csp6I GTAC 4 cut(s) 131, 135, 208, 346
CviQI GTAC 4 cut(s) 131, 135, 208, 346
DdeI CTNAG 3 cut(s) 737, 1784, 1815
DpnI GATC 7 cut(s) 28, 79, 412, 1083, 1261, 1317, 1675
DpnII GATC 7 cut(s) 26, 77, 410, 1081, 1259, 1315, 1673
DraIII CACNNNGTG 1 cut(s) 1388
EaeI YGGCCR 1 cut(s) 1323
Eco105I TACGTA 1 cut(s) 134
Eco32I GATATC 1 cut(s) 853
Eco47I GGWCC 5 cut(s) 421, 817, 1512, 1608, 1653
Eco57I CTGAAG 3 cut(s) 51, 593, 1665
EcoNI CCTNNNNNAGG 2 cut(s) 611, 1885
EcoRII CCWGG 1 cut(s) 869
EcoRV GATATC 1 cut(s) 853
EcoT22I ATGCAT 1 cut(s) 777
Esp3I CGTCTC 1 cut(s) 1745
FalI AAGNNNNNCTT 2 cut(s) 1605, 1637
FauI CCCGC 1 cut(s) 1009
FbaI TGATCA 1 cut(s) 1315
FokI GGATG 7 cut(s) 553, 728, 968, 1445, 1471, 1617, 1781
FspBI CTAG 2 cut(s) 710, 1296
GlaI GCGC 1 cut(s) 1691
GsaI CCCAGC 1 cut(s) 786
HaeIII GGCC 3 cut(s) 858, 1000, 1325
HapII CCGG 5 cut(s) 75, 387, 419, 1326, 1515
HgaI GACGC 2 cut(s) 93, 478
HhaI GCGC 1 cut(s) 1692
Hin6I GCGC 1 cut(s) 1690
HinP1I GCGC 1 cut(s) 1690
HincII GTYRAC 4 cut(s) 1369, 1453, 1480, 1488
HindII GTYRAC 4 cut(s) 1369, 1453, 1480, 1488
HindIII AAGCTT 2 cut(s) 1290, 1647
HinfI GANTC 6 cut(s) 287, 925, 1546, 1639, 1800, 1841
HpaI GTTAAC 1 cut(s) 1453
HpaII CCGG 5 cut(s) 75, 387, 419, 1326, 1515
HphI GGTGA 4 cut(s) 137, 405, 983, 1196
Hpy166II GTNNAC 8 cut(s) 210, 565, 949, 1369, 1391, 1453, 1480, 1488
Hpy188I TCNGA 6 cut(s) 70, 666, 1086, 1198, 1224, 1638
Hpy8I GTNNAC 8 cut(s) 210, 565, 949, 1369, 1391, 1453, 1480, 1488
HpyAV CCTTC 7 cut(s) 75, 184, 531, 617, 644, 1219, 1610
HpyCH4III ACNGT 4 cut(s) 139, 397, 1283, 1867
HpyCH4IV ACGT 2 cut(s) 133, 1097
HpyF3I CTNAG 3 cut(s) 737, 1784, 1815
HpySE526I ACGT 2 cut(s) 133, 1097
HspAI GCGC 1 cut(s) 1690
Kpn2I TCCGGA 1 cut(s) 1514
KpnI GGTACC 1 cut(s) 349
Ksp22I TGATCA 1 cut(s) 1315
KspAI GTTAAC 1 cut(s) 1453
Kzo9I GATC 7 cut(s) 26, 77, 410, 1081, 1259, 1315, 1673
LmnI GCTCC 1 cut(s) 836
LweI GCATC 8 cut(s) 250, 283, 750, 762, 1169, 1449, 1546, 1547
MaeI CTAG 2 cut(s) 710, 1296
MaeII ACGT 2 cut(s) 133, 1097
MaeIII GTNAC 4 cut(s) 139, 352, 1184, 1519
MalI GATC 7 cut(s) 28, 79, 412, 1083, 1261, 1317, 1675
MboI GATC 7 cut(s) 26, 77, 410, 1081, 1259, 1315, 1673
MboII GAAGA 5 cut(s) 632, 822, 1385, 1449, 1565
MfeI CAATTG 2 cut(s) 1362, 1560
MflI RGATCY 2 cut(s) 26, 1673
MhlI GDGCHC 2 cut(s) 395, 1393
MlyI GAGTC 1 cut(s) 1633
MmeI TCCRAC 1 cut(s) 769
Mph1103I ATGCAT 1 cut(s) 777
MroI TCCGGA 1 cut(s) 1514
MseI TTAA 7 cut(s) 42, 431, 495, 1269, 1428, 1452, 1724
MslI CAYNNNNRTG 1 cut(s) 154
MspA1I CMGCKG 3 cut(s) 1004, 1662, 1738
MspCI CTTAAG 1 cut(s) 430
MspI CCGG 5 cut(s) 75, 387, 419, 1326, 1515
MspR9I CCNGG 3 cut(s) 75, 388, 871
MunI CAATTG 2 cut(s) 1362, 1560
MvaI CCWGG 1 cut(s) 871
NciI CCSGG 2 cut(s) 75, 388
NdeII GATC 7 cut(s) 26, 77, 410, 1081, 1259, 1315, 1673
NlaIV GGNNCC 3 cut(s) 28, 347, 818
NmuCI GTSAC 2 cut(s) 352, 1184
NsiI ATGCAT 1 cut(s) 777
NspI RCATGY 3 cut(s) 1350, 1486, 1690
PaeI GCATGC 1 cut(s) 1350
PagI TCATGA 2 cut(s) 256, 847
PciI ACATGT 1 cut(s) 1482
PfeI GAWTC 5 cut(s) 287, 925, 1546, 1800, 1841
PleI GAGTC 1 cut(s) 1633
PpsI GAGTC 1 cut(s) 1633
Ppu21I YACGTR 2 cut(s) 134, 1098
PscI ACATGT 1 cut(s) 1482
PshBI ATTAAT 1 cut(s) 495
PsiI TTATAA 2 cut(s) 891, 1407
Psp6I CCWGG 1 cut(s) 869
PspFI CCCAGC 1 cut(s) 782
PspGI CCWGG 1 cut(s) 869
PspN4I GGNNCC 3 cut(s) 28, 347, 818
PspPI GGNCC 6 cut(s) 421, 817, 999, 1512, 1608, 1653
PstI CTGCAG 1 cut(s) 52
PsuI RGATCY 2 cut(s) 26, 1673
RsaI GTAC 4 cut(s) 132, 136, 209, 347
RsaNI GTAC 4 cut(s) 131, 135, 208, 346
RseI CAYNNNNRTG 1 cut(s) 154
SaqAI TTAA 7 cut(s) 42, 431, 495, 1269, 1428, 1452, 1724
Sau3AI GATC 7 cut(s) 26, 77, 410, 1081, 1259, 1315, 1673
Sau96I GGNCC 6 cut(s) 421, 817, 999, 1512, 1608, 1653
SchI GAGTC 1 cut(s) 1633
ScrFI CCNGG 3 cut(s) 75, 388, 871
SduI GDGCHC 2 cut(s) 395, 1393
SfaNI GCATC 8 cut(s) 250, 283, 750, 762, 1169, 1449, 1546, 1547
SfcI CTRYAG 2 cut(s) 48, 1530
SinI GGWCC 5 cut(s) 421, 817, 1512, 1608, 1653
SmiMI CAYNNNNRTG 1 cut(s) 154
SmlI CTYRAG 4 cut(s) 269, 320, 430, 554
SmoI CTYRAG 4 cut(s) 269, 320, 430, 554
SnaBI TACGTA 1 cut(s) 134
SpeI ACTAGT 1 cut(s) 709
SphI GCATGC 1 cut(s) 1350
SsiI CCGC 6 cut(s) 205, 1002, 1350, 1583, 1662, 1736
SspI AATATT 1 cut(s) 250
SspMI CTAG 2 cut(s) 710, 1296
StyD4I CCNGG 3 cut(s) 73, 386, 869
TaaI ACNGT 4 cut(s) 139, 397, 1283, 1867
TaiI ACGT 2 cut(s) 136, 1100
TaqI TCGA 4 cut(s) 525, 1541, 1805, 1872
TauI GCSGC 1 cut(s) 1665
TfiI GAWTC 5 cut(s) 287, 925, 1546, 1800, 1841
Tru1I TTAA 7 cut(s) 42, 431, 495, 1269, 1428, 1452, 1724
Tru9I TTAA 7 cut(s) 42, 431, 495, 1269, 1428, 1452, 1724
TscAI CASTG 3 cut(s) 1288, 1398, 1721
TseFI GTSAC 2 cut(s) 352, 1184
Tsp45I GTSAC 2 cut(s) 352, 1184
TspDTI ATGAA 5 cut(s) 138, 1290, 1565, 1611, 1785
TspGWI ACGGA 1 cut(s) 1769
TspRI CASTG 3 cut(s) 1288, 1398, 1721
Vha464I CTTAAG 1 cut(s) 430
VneI GTGCAC 1 cut(s) 1389
VpaK11BI GGWCC 5 cut(s) 421, 817, 1512, 1608, 1653
VspI ATTAAT 1 cut(s) 495
XagI CCTNNNNNAGG 2 cut(s) 611, 1885
XapI RAATTY 4 cut(s) 176, 215, 382, 1590
XceI RCATGY 3 cut(s) 1350, 1486, 1690
XspI CTAG 2 cut(s) 710, 1296
Zsp2I ATGCAT 1 cut(s) 777
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.