pycom09g09050

Remorin, C-terminal region

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
Physical Location & Seq
Reverse (-)
7167239 .. 7170988
3750 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g09050.2

Sequence Viewer

Length: 1524 bp
ATGTGTGTTTTATTACTACACCCAAATGGTGGGGGAGATAGACAAAGCTCTTGTCCAAGATACCAAAAAGTAGTGATTCCACAAGAGAAGCATCCCCATCCCCATCCACCACAAATCCTCTCTCTTTCCATGGATCTCACAAGCCCCAGATGTTTTCAACCTCCATCTTTTATCTCATCCAGTGGGGAACTGCCATTGGAGAGCAACCCAAGCTTCTATGGAAAAACCACAAAGGACCCATTTGCAGACACATTTCCAGACCCTCTCTGCAAGCTCAACCTCAGGGAAACCTCTGAGTTTGTCAAGTCACTCCCAGTCCCAAGCAATGCCACATCAGCACAGAGGAGGGACGGAGGAGTGAACTCTATGACACAGAGGAGAGCAGCAGAAGCTCCTCCCAGTCCTGGAAGGCCAGTTTTCAGCTTCTCAGTTGGCAACTTTTCCAGAAAGAGCTTTCCTTCAAAGTGGGATGATGCTGAAAAGTGGCTCATAAGCACTTCCTGCCATGACTCTCCTGCTCACACCACCAAGCCGCAATCAGATTCCACAAAGATTTTTAATCCAAAACAATGTGAGGTTTTTGCTGAAAGATCAAGGGTCACAGAGGAAAAGGTCTCAAAGGTGGTCTCAAGCTTTCAAAGATGTGTTTCTTTGAACAATTATCAATCTACCAGAGCTTTCAATGGGGTCTCAACATCAGCTGATGTGCTTCTAAAAGATAAGTTTGTCGATGACATAGAACCAATTTTACCCAATTCCAGGTGCTTAGAGCCAACTAAAGAGGGCTTTCTATTCAAAAACTCAGCCTGTGACGCCGCGAAAGATGCAGGCAGCGGCACAGAAGAGGCTCATGATGTACACCATCGAGATGTCGGCACAGAGATGACTCCTCTTGGAAGCTCAACAACTTCAAGGTGCCCCACGCCGTTCAAGTGCTCATCTCCAGCGCGCCACAACACGCCTGCGAACAGGTCAGGGCCTTTGGCACTGGGGCACTCTAGCAGCACCAACAACACCATTGACATTGCCCAGCTGCAGGAGTGCCTTGGGACACAGTACGAATCAGTTACGTCGAACTGGAGCTCAAGGGAAGAGGAGGAAGTGGAAATATCGAAGAGCTTGAGACATTTCGAAACAAGCAATGCGTACGGAGAGAGAATTTCTGAAATTAGAGGTGCTGCATGGGAAGAGGAAGAAAATAACGAATGCTGCCTTAGATATCAAAGAGAAGAAGCCAAAATCCAAGCTTGGGTCAACCTCCAAAGTGCAAAAGCAGAAGCTCAGTCAAGAAAGCTTGAGGTGAAGATACAGAAGATGAGATCGAACCTGGAGGAGAAGCTGATGAAGAGGATGGCAGTAGTTCACAGAAAAGCTGAGGAGTGGAGTGCAACAGCGAGGCAGCAGCACTCTGAACAAATCCACAAGGCCACCAACAATGCAGCACACAAGATGATCACAAATAGGCACAACCCTCATTTTTCTGGCCACATTTCTTGCGGCTGCTTCCCTTGCAATAACCATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

508

Amino Acids

56.53

Weight (kDa)

7.86

Isoelectric Point (pI)

61.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 915
AccB7I CCANNNNNTGG 1 cut(s) 29
AccII CGCG 2 cut(s) 818, 949
AciI CCGC 4 cut(s) 533, 816, 834, 1497
AclWI GGATC 1 cut(s) 141
AcoI YGGCCR 1 cut(s) 1483
AcsI RAATTY 1 cut(s) 1158
AcyI GRCGYC 1 cut(s) 813
AfaI GTAC 3 cut(s) 858, 1058, 1148
AfiI CCNNNNNNNGG 5 cut(s) 29, 404, 759, 1036, 1249
AgsI TTSAA 8 cut(s) 158, 462, 638, 655, 682, 796, 912, 931
AjnI CCWGG 3 cut(s) 403, 758, 1326
Alw21I GWGCWC 2 cut(s) 938, 1085
Alw26I GTCTC 4 cut(s) 619, 631, 694, 1117
AlwI GGATC 1 cut(s) 141
AoxI GGCC 4 cut(s) 410, 977, 1425, 1483
ApoI RAATTY 1 cut(s) 1158
ArsI GACNNNNNNTTYG 2 cut(s) 37, 69
AspLEI GCGC 2 cut(s) 949, 951
AspS9I GGNCC 2 cut(s) 235, 977
AsuHPI GGTGA 1 cut(s) 1312
AsuII TTCGAA 1 cut(s) 1131
AvaII GGWCC 1 cut(s) 235
AxyI CCTNAGG 1 cut(s) 281
BaeGI GKGCMC 2 cut(s) 920, 996
BalI TGGCCA 1 cut(s) 1485
BanI GGYRCC 1 cut(s) 915
BanII GRGCYC 1 cut(s) 1085
Bbv12I GWGCWC 2 cut(s) 938, 1085
BbvCI CCTCAGC 1 cut(s) 1374
BccI CCATC 5 cut(s) 105, 111, 172, 870, 1345
BceAI ACGGC 1 cut(s) 910
BciT130I CCWGG 3 cut(s) 405, 760, 1328
BclI TGATCA 1 cut(s) 1452
BcoDI GTCTC 4 cut(s) 619, 631, 694, 1117
BfaI CTAG 1 cut(s) 999
BfmI CTRYAG 1 cut(s) 1034
Bme1390I CCNGG 3 cut(s) 405, 760, 1328
Bme18I GGWCC 1 cut(s) 235
BmgT120I GGNCC 2 cut(s) 235, 977
BmiI GGNNCC 2 cut(s) 237, 917
BmrFI CCNGG 3 cut(s) 405, 760, 1328
BmrI ACTGGG 3 cut(s) 308, 393, 998
BmsI GCATC 3 cut(s) 100, 463, 814
BmuI ACTGGG 3 cut(s) 308, 393, 998
BpmI CTGGAG 3 cut(s) 927, 1099, 1349
Bpu10I CCTNAGC 1 cut(s) 1374
Bpu14I TTCGAA 1 cut(s) 1131
BpuEI CTTGAG 4 cut(s) 613, 1069, 1141, 1316
BsaHI GRCGYC 1 cut(s) 813
BsaI GGTCTC 3 cut(s) 619, 631, 694
BsaJI CCNNGG 2 cut(s) 129, 1045
Bsc4I CCNNNNNNNGG 5 cut(s) 29, 404, 759, 1036, 1249
Bse1I ACTGG 6 cut(s) 180, 314, 399, 413, 993, 1082
Bse21I CCTNAGG 1 cut(s) 281
Bse3DI GCAATG 3 cut(s) 331, 1023, 1147
BseBI CCWGG 3 cut(s) 405, 760, 1328
BseDI CCNNGG 2 cut(s) 129, 1045
BseGI GGATG 6 cut(s) 91, 97, 103, 176, 475, 1356
BseLI CCNNNNNNNGG 5 cut(s) 29, 404, 759, 1036, 1249
BseMI GCAATG 3 cut(s) 331, 1023, 1147
BseMII CTCAG 6 cut(s) 285, 295, 441, 816, 1295, 1365
BseNI ACTGG 6 cut(s) 180, 314, 399, 413, 993, 1082
BsePI GCGCGC 1 cut(s) 947
BseRI GAGGAG 8 cut(s) 358, 369, 384, 391, 879, 1109, 1346, 1391
BseSI GKGCMC 2 cut(s) 920, 996
BseYI CCCAGC 1 cut(s) 1029
Bsh1236I CGCG 2 cut(s) 818, 949
BshFI GGCC 4 cut(s) 412, 979, 1427, 1485
BshNI GGYRCC 1 cut(s) 915
BsiHKAI GWGCWC 2 cut(s) 938, 1085
BsiWI CGTACG 1 cut(s) 1146
BslFI GGGAC 3 cut(s) 302, 362, 1063
BslI CCNNNNNNNGG 5 cut(s) 29, 404, 759, 1036, 1249
BsmAI GTCTC 4 cut(s) 619, 631, 694, 1117
BsmFI GGGAC 3 cut(s) 302, 362, 1063
BsmI GAATGC 1 cut(s) 1211
BsnI GGCC 4 cut(s) 412, 979, 1427, 1485
Bso31I GGTCTC 3 cut(s) 619, 631, 694
Bsp119I TTCGAA 1 cut(s) 1131
Bsp1286I GDGCHC 4 cut(s) 920, 938, 996, 1085
Bsp1407I TGTACA 1 cut(s) 856
Bsp143I GATC 4 cut(s) 133, 590, 1319, 1452
Bsp19I CCATGG 1 cut(s) 129
BspACI CCGC 4 cut(s) 533, 816, 834, 1497
BspANI GGCC 4 cut(s) 412, 979, 1427, 1485
BspCNI CTCAG 6 cut(s) 286, 294, 440, 815, 1294, 1366
BspFNI CGCG 2 cut(s) 818, 949
BspHI TCATGA 1 cut(s) 850
BspLI GGNNCC 2 cut(s) 237, 917
BspMAI CTGCAG 1 cut(s) 1038
BspPI GGATC 1 cut(s) 141
BspQI GCTCTTC 1 cut(s) 1109
BspT104I TTCGAA 1 cut(s) 1131
BspT107I GGYRCC 1 cut(s) 915
BspTNI GGTCTC 3 cut(s) 619, 631, 694
BsrDI GCAATG 3 cut(s) 331, 1023, 1147
BsrGI TGTACA 1 cut(s) 856
BsrI ACTGG 6 cut(s) 180, 314, 399, 413, 993, 1082
BssECI CCNNGG 2 cut(s) 129, 1045
BssHII GCGCGC 1 cut(s) 947
BssMI GATC 4 cut(s) 133, 590, 1319, 1452
BssNI GRCGYC 1 cut(s) 813
BssT1I CCWWGG 2 cut(s) 129, 1045
Bst2UI CCWGG 3 cut(s) 405, 760, 1328
Bst4CI ACNGT 1 cut(s) 1056
Bst6I CTCTTC 5 cut(s) 837, 1086, 1109, 1182, 1340
BstACI GRCGYC 1 cut(s) 813
BstAPI GCANNNNNTGC 1 cut(s) 501
BstAUI TGTACA 1 cut(s) 856
BstBI TTCGAA 1 cut(s) 1131
BstC8I GCNNGC 4 cut(s) 272, 829, 949, 963
BstDEI CTNAG 8 cut(s) 281, 294, 427, 766, 802, 1214, 1281, 1374
BstDSI CCRYGG 1 cut(s) 129
BstF5I GGATG 6 cut(s) 91, 97, 103, 176, 475, 1356
BstFNI CGCG 2 cut(s) 818, 949
BstHHI GCGC 2 cut(s) 949, 951
BstKTI GATC 4 cut(s) 136, 593, 1322, 1455
BstMAI GTCTC 4 cut(s) 619, 631, 694, 1117
BstMBI GATC 4 cut(s) 133, 590, 1319, 1452
BstMWI GCNNNNNNNGC 7 cut(s) 210, 335, 389, 501, 812, 824, 1509
BstNI CCWGG 3 cut(s) 405, 760, 1328
BstSCI CCNGG 3 cut(s) 403, 758, 1326
BstSFI CTRYAG 1 cut(s) 1034
BstSLI GKGCMC 2 cut(s) 920, 996
BstUI CGCG 2 cut(s) 818, 949
BstX2I RGATCY 1 cut(s) 133
BstYI RGATCY 1 cut(s) 133
Bsu36I CCTNAGG 1 cut(s) 281
BsuRI GGCC 4 cut(s) 412, 979, 1427, 1485
BtgI CCRYGG 1 cut(s) 129
BtsCI GGATG 6 cut(s) 91, 97, 103, 176, 475, 1356
BtsIMutI CAGTG 2 cut(s) 187, 986
Cac8I GCNNGC 4 cut(s) 272, 829, 949, 963
CciI TCATGA 1 cut(s) 850
CfoI GCGC 2 cut(s) 949, 951
Cfr13I GGNCC 2 cut(s) 235, 977
CseI GACGC 1 cut(s) 821
Csp6I GTAC 3 cut(s) 857, 1057, 1147
CspCI CAANNNNNGTGG 2 cut(s) 1475, 1510
CviAII CATG 4 cut(s) 130, 506, 851, 1182
CviQI GTAC 3 cut(s) 857, 1057, 1147
DdeI CTNAG 8 cut(s) 281, 294, 427, 766, 802, 1214, 1281, 1374
DpnI GATC 4 cut(s) 135, 592, 1321, 1454
DpnII GATC 4 cut(s) 133, 590, 1319, 1452
EaeI YGGCCR 1 cut(s) 1483
Eam1104I CTCTTC 5 cut(s) 837, 1086, 1109, 1182, 1340
EarI CTCTTC 5 cut(s) 837, 1086, 1109, 1182, 1340
Ecl136II GAGCTC 1 cut(s) 1083
Eco130I CCWWGG 2 cut(s) 129, 1045
Eco24I GRGCYC 1 cut(s) 1085
Eco31I GGTCTC 3 cut(s) 619, 631, 694
Eco32I GATATC 1 cut(s) 1220
Eco47I GGWCC 1 cut(s) 235
Eco53kI GAGCTC 1 cut(s) 1083
Eco81I CCTNAGG 1 cut(s) 281
EcoICRI GAGCTC 1 cut(s) 1083
EcoO109I RGGNCCY 2 cut(s) 235, 977
EcoRII CCWGG 3 cut(s) 403, 758, 1326
EcoRV GATATC 1 cut(s) 1220
EcoT14I CCWWGG 2 cut(s) 129, 1045
EcoT38I GRGCYC 1 cut(s) 1085
ErhI CCWWGG 2 cut(s) 129, 1045
FaeI CATG 4 cut(s) 133, 509, 854, 1185
FaiI YATR 8 cut(s) 131, 219, 368, 491, 507, 737, 852, 1183
FaqI GGGAC 3 cut(s) 302, 362, 1063
FatI CATG 4 cut(s) 129, 505, 850, 1181
FbaI TGATCA 1 cut(s) 1452
FokI GGATG 6 cut(s) 78, 84, 90, 163, 482, 1363
FriOI GRGCYC 1 cut(s) 1085
FspBI CTAG 1 cut(s) 999
GlaI GCGC 2 cut(s) 948, 950
GsaI CCCAGC 1 cut(s) 1033
GsuI CTGGAG 3 cut(s) 927, 1099, 1349
HaeIII GGCC 4 cut(s) 412, 979, 1427, 1485
HgaI GACGC 1 cut(s) 821
HhaI GCGC 2 cut(s) 949, 951
Hin1I GRCGYC 1 cut(s) 813
Hin1II CATG 4 cut(s) 133, 509, 854, 1185
Hin6I GCGC 2 cut(s) 947, 949
HinP1I GCGC 2 cut(s) 947, 949
HincII GTYRAC 1 cut(s) 1255
HindII GTYRAC 1 cut(s) 1255
HindIII AAGCTT 4 cut(s) 211, 631, 1245, 1292
HinfI GANTC 5 cut(s) 76, 509, 542, 886, 1061
HphI GGTGA 1 cut(s) 1312
Hpy166II GTNNAC 4 cut(s) 361, 859, 1255, 1363
Hpy188I TCNGA 4 cut(s) 295, 541, 1165, 1411
Hpy188III TCNNGA 5 cut(s) 257, 444, 851, 866, 1287
Hpy8I GTNNAC 4 cut(s) 361, 859, 1255, 1363
Hpy99I CGWCG 1 cut(s) 1075
HpyAV CCTTC 2 cut(s) 402, 468
HpyCH4III ACNGT 1 cut(s) 1056
HpyCH4IV ACGT 1 cut(s) 1070
HpyCH4V TGCA 9 cut(s) 245, 270, 827, 1036, 1181, 1268, 1388, 1439, 1512
HpyF10VI GCNNNNNNNGC 7 cut(s) 210, 335, 389, 501, 812, 824, 1509
HpyF3I CTNAG 8 cut(s) 281, 294, 427, 766, 802, 1214, 1281, 1374
HpySE526I ACGT 1 cut(s) 1070
Hsp92I GRCGYC 1 cut(s) 813
Hsp92II CATG 4 cut(s) 133, 509, 854, 1185
HspAI GCGC 2 cut(s) 947, 949
Ksp22I TGATCA 1 cut(s) 1452
Kzo9I GATC 4 cut(s) 133, 590, 1319, 1452
LguI GCTCTTC 1 cut(s) 1109
LmnI GCTCC 2 cut(s) 397, 1080
LweI GCATC 3 cut(s) 100, 463, 814
MaeI CTAG 1 cut(s) 999
MaeII ACGT 1 cut(s) 1070
MaeIII GTNAC 4 cut(s) 306, 598, 809, 1066
MalI GATC 4 cut(s) 135, 592, 1321, 1454
MboI GATC 4 cut(s) 133, 590, 1319, 1452
MboII GAAGA 9 cut(s) 854, 1103, 1126, 1199, 1205, 1241, 1315, 1324, 1357
MflI RGATCY 1 cut(s) 133
MhlI GDGCHC 4 cut(s) 920, 938, 996, 1085
MlsI TGGCCA 1 cut(s) 1485
MluCI AATT 5 cut(s) 658, 744, 754, 1158, 1167
MluNI TGGCCA 1 cut(s) 1485
MlyI GAGTC 2 cut(s) 503, 880
Mox20I TGGCCA 1 cut(s) 1485
MscI TGGCCA 1 cut(s) 1485
MseI TTAA 2 cut(s) 558, 1522
MslI CAYNNNNRTG 3 cut(s) 24, 867, 881
Msp20I TGGCCA 1 cut(s) 1485
MspA1I CMGCKG 3 cut(s) 701, 834, 1033
MspR9I CCNGG 3 cut(s) 405, 760, 1328
Mva1269I GAATGC 1 cut(s) 1211
MvaI CCWGG 3 cut(s) 405, 760, 1328
MvnI CGCG 2 cut(s) 818, 949
MwoI GCNNNNNNNGC 7 cut(s) 210, 335, 389, 501, 812, 824, 1509
NcoI CCATGG 1 cut(s) 129
NdeII GATC 4 cut(s) 133, 590, 1319, 1452
NlaIII CATG 4 cut(s) 133, 509, 854, 1185
NlaIV GGNNCC 2 cut(s) 237, 917
NmuCI GTSAC 3 cut(s) 306, 598, 809
NspV TTCGAA 1 cut(s) 1131
PagI TCATGA 1 cut(s) 850
PauI GCGCGC 1 cut(s) 947
PciSI GCTCTTC 1 cut(s) 1109
PctI GAATGC 1 cut(s) 1211
PfeI GAWTC 3 cut(s) 76, 542, 1061
Pfl23II CGTACG 1 cut(s) 1146
PflMI CCANNNNNTGG 1 cut(s) 29
PfoI TCCNGGA 1 cut(s) 403
PleI GAGTC 2 cut(s) 503, 880
PpsI GAGTC 2 cut(s) 503, 880
PpuMI RGGWCCY 1 cut(s) 235
Psp124BI GAGCTC 1 cut(s) 1085
Psp5II RGGWCCY 1 cut(s) 235
Psp6I CCWGG 3 cut(s) 403, 758, 1326
PspFI CCCAGC 1 cut(s) 1029
PspGI CCWGG 3 cut(s) 403, 758, 1326
PspLI CGTACG 1 cut(s) 1146
PspN4I GGNNCC 2 cut(s) 237, 917
PspPI GGNCC 2 cut(s) 235, 977
PspPPI RGGWCCY 1 cut(s) 235
PsrI GAACNNNNNNTAC 2 cut(s) 732, 764
PstI CTGCAG 1 cut(s) 1038
PsuI RGATCY 1 cut(s) 133
PteI GCGCGC 1 cut(s) 947
PvuII CAGCTG 2 cut(s) 701, 1033
RsaI GTAC 3 cut(s) 858, 1058, 1148
RsaNI GTAC 3 cut(s) 857, 1057, 1147
RseI CAYNNNNRTG 3 cut(s) 24, 867, 881
SacI GAGCTC 1 cut(s) 1085
SapI GCTCTTC 1 cut(s) 1109
SaqAI TTAA 2 cut(s) 558, 1522
Sau3AI GATC 4 cut(s) 133, 590, 1319, 1452
Sau96I GGNCC 2 cut(s) 235, 977
SchI GAGTC 2 cut(s) 503, 880
ScrFI CCNGG 3 cut(s) 405, 760, 1328
SduI GDGCHC 4 cut(s) 920, 938, 996, 1085
SfaNI GCATC 3 cut(s) 100, 463, 814
SfcI CTRYAG 1 cut(s) 1034
SfuI TTCGAA 1 cut(s) 1131
SinI GGWCC 1 cut(s) 235
SmiMI CAYNNNNRTG 3 cut(s) 24, 867, 881
SmlI CTYRAG 4 cut(s) 628, 1084, 1120, 1295
SmoI CTYRAG 4 cut(s) 628, 1084, 1120, 1295
Sse9I AATT 5 cut(s) 658, 744, 754, 1158, 1167
SsiI CCGC 4 cut(s) 533, 816, 834, 1497
SspMI CTAG 1 cut(s) 999
SstI GAGCTC 1 cut(s) 1085
StyD4I CCNGG 3 cut(s) 403, 758, 1326
StyI CCWWGG 2 cut(s) 129, 1045
TaaI ACNGT 1 cut(s) 1056
TaiI ACGT 1 cut(s) 1073
TaqI TCGA 6 cut(s) 729, 865, 1073, 1112, 1131, 1322
TasI AATT 5 cut(s) 658, 744, 754, 1158, 1167
TatI WGTACW 1 cut(s) 856
TauI GCSGC 4 cut(s) 535, 818, 837, 1500
TfiI GAWTC 3 cut(s) 76, 542, 1061
Tru1I TTAA 2 cut(s) 558, 1522
Tru9I TTAA 2 cut(s) 558, 1522
TscAI CASTG 2 cut(s) 187, 993
TseFI GTSAC 3 cut(s) 306, 598, 809
Tsp45I GTSAC 3 cut(s) 306, 598, 809
TspDTI ATGAA 1 cut(s) 1358
TspGWI ACGGA 2 cut(s) 366, 1164
TspRI CASTG 2 cut(s) 187, 993
Van91I CCANNNNNTGG 1 cut(s) 29
VpaK11BI GGWCC 1 cut(s) 235
XapI RAATTY 1 cut(s) 1158
XspI CTAG 1 cut(s) 999
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.