Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0005331

Physical Location & Seq

Genomic Coordinates Forward (+)

430981 .. 437659

Gene Structure 6679 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2073 bp

ATGCTTCGTGCTATATACATTGCTGGTCATGCGACAGAATCATTCACAGAATTTGTTGTAGGACATGGAGAGTTATGGTCTGCGCAGATGCTGTCATGTGTTATTAGAAAGAATGGGGTAGATTGCAATTGGATGGATACAAGGGAAGTCCTTATTGTGAAACCTACAAGTTCTAATCAAGTTGATCCTGATTTCAAGGCATCTGAAGATAGACTTGAGAAATGGTATTCCAAAAATCCATCAAAAACAATCATAGCTACTGGCTTTATTGCTAGCACACCTCAAAATATTCCTACTACTTTGAAGAGAGATGGAAGTGACTTCTCTGCAGCTATCATGGGTGCTCTATTCAAGGCTCGTCAAGTCACAATTTGGACAGATGTTGATGGAGTCTATAGTGCAGATCCCAGAAAAGTCAGTGAGGCAGTGATTCTGAAGACTTTGTCTTATCAAGAAGCCTGGGAAATGTCTTATTTTGGGGCAAATGTTCTGCATCCACGCACTATCATCCCAGTGATGCGATATGACATTCCAATTATAATAAGGAACATTTTCAACCTTGCTGCACCTGGAACAAAAATTTGTCGCTCTACTGAGGATGAAACTGCCCAGGGTTTGGAGTCGTTTGTCAAAGGGTTTGCCACAATAGACAACTTGGCTCTTGTCAATGTGGAAGGAACTGGAATGGCTGGTGTTCCTGGTACAGCCAGTGCTATCTTTAGTGCTGTAAAAGATGTTGGGGCTAATGTTATTATGATATCTCAGGTTCAAGTCATTCCAAACTGTAGTATTTTGGCAACAGTTGGCCAAAAGATGGCCAGTACTCCTGGAGTTAGTGCAACTCTTTTCAATGCACTGGCAAAGGCAAACATTAATGTGCGTGCCATTGCTCAAGGTTGTTCTGAGTACAATATTACTGTAGTTGTAAAGCGGGAGGATTGTATTAGGGCTCTGAGAGCTGTCCATTCAAGATTCTATCATTCAAGGACCACAATAGCAATGGGCATCATCGGACCTGGTCTGATTGGTGCCACATTACTAGATCGATTAAGGGATCAGACAACTACCCTCAAGGAAGAGTTTAACATTGATTTGCGTGTTATGGGAATCACTGGCTCACGGACAATGCTTTTGAGTGAGGCGGGTGTTGACTTATCTAGATGGAGAGAACTCCAAAAAGAGAAAGGAGTAGTAGCAGATATGGAAAAGTTTGTGCAGCATGTACATGGGAATCATTTTATTCCGAATACTGTTTTGGTTGACTGCACAGCTGACTCTAGTATTGCAAGCCATTACTATGACTGGTTGCGGAAAGGAATTCATGTAGTCACTCCCAACAAAAAGGCAAACTCAGGGCCACTTGATCAATATTTGAAATTACGAGCTCTTCAACGGCAATCATATACACATTACTTCTATGAAGCTACTGTTGGAGCTGGTCTGCCAATTATTAATACATTACAAGGTCTCCTGGAAACTGGAGACAAAATATTGCGCATTGAAGGCATCTTCAGTGGTACTTTGAGTTATATCTTCAACAATTTCACTGGAGGACGCACTTTTAGTGAGGTGGTGGCTGAAGCAAAGCAGGCAGGTTATACTGAGCCGGATCCAAGGGATGATCTTTCTGGAACAGATGTTTGTAGAAAGGTCATAATTCTTGCAAGGGAATCTGGTCTTAAGCTGGAACTCTCTGACATCCCTGTTGAAAGCCTTGTGCCGGAACCCTTGAAGGATAGTGCGTCAGCCGAGGAATTCATGCAAAAACTTCCTCAATTCGATCAAGAGATGAGTAAGAAAAGACAGATTGCTGAGGATGCAGGAGGAGTCTTGAGATACGTTGGAGTGGTTGACATGGTCAATCAGAAAGGGGAAGTGAAGCTGCAGAAGTACAAGAATGATCATCCTTTCGCTCAACTATCCGGGGCAGATAATATAATTGCGTTCACAACAACTAGATACAAAGATCAGCCCCTAATAGTTCGTGGGCCTGGTGCTGGTGCTGAAGTCACTGCTGGCGGTGTCTTCAGTGACCTGTTGCGGCTTGCTTCATACCTTGGTGCCCCGTCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004072 GO:0004412 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006520 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009069 GO:0009070 GO:0009090 GO:0009092 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0016053 GO:0016301 GO:0016310 GO:0016491 GO:0016614 GO:0016616 GO:0016740 GO:0016772 GO:0016774 GO:0019202 GO:0019752 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0055114 GO:0071704 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607

KEGG Pathways

Metabolic & Signaling

ko00260 ko00261 ko00270 ko00300 ko01100 ko01110 ko01120 ko01130 ko01230 map00260 map00261 map00270 map00300 map01100 map01110 map01120 map01130 map01230

Pfam Domains

Protein Families

AA_kinase ACT ACT_7 Homoserine_dh NAD_binding_3

Protein Analysis

691

Amino Acids

75.58

Weight (kDa)

6.66

Isoelectric Point (pI)

32.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AA_kinase	PF00696	17 - 183	4.6e-31	Amino acid kinase family
ACT_9	PF22468	222 - 255	1.4e-07	ACT domain
ACT_7	PF13840	259 - 323	1.6e-10	ACT domain
ACT_9	PF22468	266 - 325	8.8e-23	ACT domain
ACT	PF01842	271 - 313	7.1e-07	ACT domain
NAD_binding_3	PF03447	338 - 474	3.8e-22	Homoserine dehydrogenase, NAD binding domain
Homoserine_dh	PF00742	482 - 680	9.2e-54	Homoserine dehydrogenase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005331)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G31230 AT4G19710 AT4G19710
fragaria_vesca	FvH4_2g00800 FvH4_2g00800 FvH4_2g00800 FvH4_2g00800
malus_domestica	MD05G1003800.v1.1 MD10G1004700.v1.1
prunus_persica	Prupe.5G007500_v2.0.a1 Prupe.5G007500_v2.0.a1 Prupe.5G007500_v2.0.a1 Prupe.8G007000_v2.0.a1 Prupe.8G007000_v2.0.a1
pyrus_communis	pycom05g00330 pycom10g00370 pycom10g00380
rosa_chinensis	RchiOBHm_Chr6g0251231
rosa_laevigata	RLG00000015472
rosa_multiflora	Rmu_sc0001637.1_g000003 Rmu_sc0015396.1_g000003
rosa_roxburghii	Rroxscaffold_7G00216900
rosa_rugosa	Rorug05G0500900.1 Rorug05G0501000
rosa_samantha	Rh6BG001700 Rh6CG007400 Rh6DG007800
rosa_wichuraiana	Rw6G001010 Rw6G001120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	539
Acc16I	TGCGCA	2 cut(s)	84, 1496
Acc36I	ACCTGC	1 cut(s)	1583
AccB1I	GGYRCC	2 cut(s)	1028, 2060
AccB7I	CCANNNNNTGG	2 cut(s)	616, 814
AciI	CCGC	5 cut(s)	931, 1142, 1309, 2019, 2041
AclWI	GGATC	5 cut(s)	179, 398, 1062, 1604, 1617
AcoI	YGGCCR	2 cut(s)	805, 816
AcsI	RAATTY	4 cut(s)	50, 579, 1317, 1754
AcuI	CTGAAG	6 cut(s)	225, 455, 1495, 1599, 2011, 2025
AfaI	GTAC	6 cut(s)	703, 823, 908, 1224, 1519, 1892
AfiI	CCNNNNNNNGG	4 cut(s)	616, 814, 1720, 1997
AflII	CTTAAG	1 cut(s)	1679
AjnI	CCWGG	8 cut(s)	458, 568, 609, 697, 826, 1015, 1470, 1990
AjuI	GAANNNNNNNTTGG	4 cut(s)	1238, 1270, 1413, 1445
AluBI	AGCT	9 cut(s)	257, 332, 959, 1271, 1385, 1424, 1436, 1684, 1882
AluI	AGCT	9 cut(s)	257, 332, 959, 1271, 1385, 1424, 1436, 1684, 1882
Alw21I	GWGCWC	2 cut(s)	346, 1387
Alw26I	GTCTC	2 cut(s)	1472, 1476
AlwI	GGATC	5 cut(s)	179, 398, 1062, 1604, 1617
AlwNI	CAGNNNCTG	1 cut(s)	91
AoxI	GGCC	4 cut(s)	805, 816, 1355, 1988
ApeKI	GCWGC	4 cut(s)	329, 563, 1216, 1882
ApoI	RAATTY	4 cut(s)	50, 579, 1317, 1754
ArsI	GACNNNNNNTTYG	2 cut(s)	1114, 1146
AseI	ATTAAT	2 cut(s)	873, 1452
Asp700I	GAANNNNTTC	1 cut(s)	551
AspLEI	GCGC	2 cut(s)	85, 1497
AspS9I	GGNCC	4 cut(s)	987, 1013, 1355, 1988
AsuC2I	CCSGG	1 cut(s)	1924
AsuNHI	GCTAGC	1 cut(s)	272
AvaII	GGWCC	2 cut(s)	987, 1013
BaeGI	GKGCMC	1 cut(s)	2065
BalI	TGGCCA	2 cut(s)	807, 818
BamHI	GGATCC	1 cut(s)	1609
BanI	GGYRCC	2 cut(s)	1028, 2060
BanII	GRGCYC	2 cut(s)	952, 1387
BbsI	GAAGAC	2 cut(s)	443, 2017
Bbv12I	GWGCWC	2 cut(s)	346, 1387
BbvCI	CCTCAGC	1 cut(s)	1812
BbvI	GCAGC	4 cut(s)	341, 550, 1228, 1869
BccI	CCATC	6 cut(s)	127, 247, 305, 380, 808, 1155
BceAI	ACGGC	1 cut(s)	1409
BciT130I	CCWGG	8 cut(s)	460, 570, 611, 699, 828, 1017, 1472, 1992
BciVI	GTATCC	1 cut(s)	130
BclI	TGATCA	2 cut(s)	1363, 1900
BcnI	CCSGG	1 cut(s)	1924
BcoDI	GTCTC	2 cut(s)	1472, 1476
BfaI	CTAG	5 cut(s)	273, 1040, 1158, 1278, 1956
BfmI	CTRYAG	5 cut(s)	327, 394, 784, 918, 1883
BfrI	CTTAAG	1 cut(s)	1679
BfuAI	ACCTGC	1 cut(s)	1583
BfuI	GTATCC	1 cut(s)	130
BisI	GCNGC	5 cut(s)	330, 564, 1217, 1883, 2042
BlsI	GCNGC	5 cut(s)	331, 565, 1218, 1884, 2043
BmcAI	AGTACT	1 cut(s)	823
Bme1390I	CCNGG	9 cut(s)	460, 570, 611, 699, 828, 1017, 1472, 1924, 1992
Bme18I	GGWCC	2 cut(s)	987, 1013
BmgT120I	GGNCC	4 cut(s)	987, 1013, 1355, 1988
BmiI	GGNNCC	4 cut(s)	1030, 1611, 1725, 2062
BmrFI	CCNGG	9 cut(s)	460, 570, 611, 699, 828, 1017, 1472, 1924, 1992
BmrI	ACTGGG	1 cut(s)	506
BmsI	GCATC	7 cut(s)	78, 209, 502, 507, 1014, 1515, 1807
BmtI	GCTAGC	1 cut(s)	276
BmuI	ACTGGG	1 cut(s)	506
BpiI	GAAGAC	2 cut(s)	443, 2017
BpmI	CTGGAG	3 cut(s)	849, 1500, 1569
Bpu10I	CCTNAGC	1 cut(s)	1812
BpuEI	CTTGAG	4 cut(s)	236, 876, 1055, 1852
BpuMI	CCSGG	1 cut(s)	1924
Bsa29I	ATCGAT	1 cut(s)	1045
BsaI	GGTCTC	1 cut(s)	1472
BsaJI	CCNNGG	7 cut(s)	459, 609, 610, 1613, 1749, 1923, 2056
BsaXI	ACNNNNNCTCC	2 cut(s)	1452, 1482
Bsc4I	CCNNNNNNNGG	4 cut(s)	616, 814, 1720, 1997
Bse3DI	GCAATG	3 cut(s)	18, 885, 1005
BseBI	CCWGG	8 cut(s)	460, 570, 611, 699, 828, 1017, 1472, 1992
BseCI	ATCGAT	1 cut(s)	1045
BseDI	CCNNGG	7 cut(s)	459, 609, 610, 1613, 1749, 1923, 2056
BseGI	GGATG	8 cut(s)	138, 493, 507, 604, 1624, 1698, 1822, 1903
BseLI	CCNNNNNNNGG	4 cut(s)	616, 814, 1720, 1997
BseMI	GCAATG	3 cut(s)	18, 885, 1005
BseMII	CTCAG	7 cut(s)	585, 776, 894, 944, 1365, 1593, 1803
BseRI	GAGGAG	1 cut(s)	1839
BseSI	GKGCMC	1 cut(s)	2065
BseXI	GCAGC	4 cut(s)	341, 550, 1228, 1869
BsgI	GTGCAG	4 cut(s)	420, 549, 1235, 1249
BshFI	GGCC	4 cut(s)	807, 818, 1357, 1990
BshNI	GGYRCC	2 cut(s)	1028, 2060
BshVI	ATCGAT	1 cut(s)	1045
BsiHKAI	GWGCWC	2 cut(s)	346, 1387
BsiSI	CCGG	3 cut(s)	1607, 1721, 1923
BslI	CCNNNNNNNGG	4 cut(s)	616, 814, 1720, 1997
BsmAI	GTCTC	2 cut(s)	1472, 1476
BsnI	GGCC	4 cut(s)	807, 818, 1357, 1990
Bso31I	GGTCTC	1 cut(s)	1472
Bsp1286I	GDGCHC	4 cut(s)	346, 952, 1387, 2065
Bsp1407I	TGTACA	1 cut(s)	1222
BspACI	CCGC	5 cut(s)	931, 1142, 1309, 2019, 2041
BspANI	GGCC	4 cut(s)	807, 818, 1357, 1990
BspCNI	CTCAG	7 cut(s)	586, 775, 895, 945, 1364, 1594, 1804
BspDI	ATCGAT	1 cut(s)	1045
BspLI	GGNNCC	4 cut(s)	1030, 1611, 1725, 2062
BspMAI	CTGCAG	2 cut(s)	331, 1887
BspMI	ACCTGC	1 cut(s)	1583
BspOI	GCTAGC	1 cut(s)	276
BspPI	GGATC	5 cut(s)	179, 398, 1062, 1604, 1617
BspQI	GCTCTTC	1 cut(s)	1392
BspT107I	GGYRCC	2 cut(s)	1028, 2060
BspTI	CTTAAG	1 cut(s)	1679
BspTNI	GGTCTC	1 cut(s)	1472
BsrDI	GCAATG	3 cut(s)	18, 885, 1005
BsrGI	TGTACA	1 cut(s)	1222
BssECI	CCNNGG	7 cut(s)	459, 609, 610, 1613, 1749, 1923, 2056
BssT1I	CCWWGG	2 cut(s)	1613, 2056
Bst2UI	CCWGG	8 cut(s)	460, 570, 611, 699, 828, 1017, 1472, 1992
Bst4CI	ACNGT	5 cut(s)	785, 802, 919, 1252, 1429
Bst6I	CTCTTC	3 cut(s)	299, 1071, 1392
BstAFI	CTTAAG	1 cut(s)	1679
BstAUI	TGTACA	1 cut(s)	1222
BstC8I	GCNNGC	6 cut(s)	274, 882, 1288, 1590, 2017, 2046
BstDEI	CTNAG	7 cut(s)	594, 762, 903, 953, 1351, 1602, 1812
BstF5I	GGATG	8 cut(s)	138, 493, 507, 604, 1624, 1698, 1822, 1903
BstHHI	GCGC	2 cut(s)	85, 1497
BstMAI	GTCTC	2 cut(s)	1472, 1476
BstMWI	GCNNNNNNNGC	5 cut(s)	29, 956, 1503, 1589, 1817
BstNI	CCWGG	8 cut(s)	460, 570, 611, 699, 828, 1017, 1472, 1992
BstNSI	RCATGY	1 cut(s)	1223
BstSCI	CCNGG	9 cut(s)	458, 568, 609, 697, 826, 1015, 1470, 1922, 1990
BstSFI	CTRYAG	5 cut(s)	327, 394, 784, 918, 1883
BstSLI	GKGCMC	1 cut(s)	2065
BstV1I	GCAGC	4 cut(s)	341, 550, 1228, 1869
BstV2I	GAAGAC	2 cut(s)	443, 2017
BstX2I	RGATCY	2 cut(s)	403, 1609
BstYI	RGATCY	2 cut(s)	403, 1609
Bsu15I	ATCGAT	1 cut(s)	1045
BsuI	GTATCC	1 cut(s)	130
BsuRI	GGCC	4 cut(s)	807, 818, 1357, 1990
BsuTUI	ATCGAT	1 cut(s)	1045
BtsCI	GGATG	8 cut(s)	138, 493, 507, 604, 1624, 1698, 1822, 1903
BtsI	GCAGTG	2 cut(s)	432, 2010
BveI	ACCTGC	1 cut(s)	1583
Cac8I	GCNNGC	6 cut(s)	274, 882, 1288, 1590, 2017, 2046
CaiI	CAGNNNCTG	1 cut(s)	91
CfoI	GCGC	2 cut(s)	85, 1497
Cfr13I	GGNCC	4 cut(s)	987, 1013, 1355, 1988
ClaI	ATCGAT	1 cut(s)	1045
CseI	GACGC	2 cut(s)	1563, 1731
CsiI	ACCWGGT	1 cut(s)	1015
Csp6I	GTAC	6 cut(s)	702, 822, 907, 1223, 1518, 1891
CviAII	CATG	9 cut(s)	29, 65, 96, 337, 1220, 1226, 1322, 1759, 1855
CviQI	GTAC	6 cut(s)	702, 822, 907, 1223, 1518, 1891
DdeI	CTNAG	7 cut(s)	594, 762, 903, 953, 1351, 1602, 1812
EaeI	YGGCCR	2 cut(s)	805, 816
Eam1104I	CTCTTC	3 cut(s)	299, 1071, 1392
EarI	CTCTTC	3 cut(s)	299, 1071, 1392
Ecl136II	GAGCTC	1 cut(s)	1385
Eco130I	CCWWGG	2 cut(s)	1613, 2056
Eco24I	GRGCYC	2 cut(s)	952, 1387
Eco31I	GGTCTC	1 cut(s)	1472
Eco32I	GATATC	1 cut(s)	759
Eco47I	GGWCC	2 cut(s)	987, 1013
Eco53kI	GAGCTC	1 cut(s)	1385
Eco57I	CTGAAG	6 cut(s)	225, 455, 1495, 1599, 2011, 2025
EcoICRI	GAGCTC	1 cut(s)	1385
EcoRI	GAATTC	2 cut(s)	1317, 1754
EcoRII	CCWGG	8 cut(s)	458, 568, 609, 697, 826, 1015, 1470, 1990
EcoRV	GATATC	1 cut(s)	759
EcoT14I	CCWWGG	2 cut(s)	1613, 2056
EcoT38I	GRGCYC	2 cut(s)	952, 1387
ErhI	CCWWGG	2 cut(s)	1613, 2056
FaeI	CATG	9 cut(s)	32, 68, 99, 340, 1223, 1229, 1325, 1762, 1858
FalI	AAGNNNNNCTT	2 cut(s)	198, 230
FatI	CATG	9 cut(s)	28, 64, 95, 336, 1219, 1225, 1321, 1758, 1854
FauI	CCCGC	2 cut(s)	924, 1135
FbaI	TGATCA	2 cut(s)	1363, 1900
Fnu4HI	GCNGC	5 cut(s)	330, 564, 1217, 1883, 2042
FokI	GGATG	8 cut(s)	145, 480, 494, 611, 1631, 1685, 1829, 1890
FriOI	GRGCYC	2 cut(s)	952, 1387
Fsp4HI	GCNGC	5 cut(s)	330, 564, 1217, 1883, 2042
FspBI	CTAG	5 cut(s)	273, 1040, 1158, 1278, 1956
FspI	TGCGCA	2 cut(s)	84, 1496
GlaI	GCGC	2 cut(s)	84, 1496
GluI	GCNGC	5 cut(s)	330, 564, 1217, 1883, 2042
GsuI	CTGGAG	3 cut(s)	849, 1500, 1569
HaeIII	GGCC	4 cut(s)	807, 818, 1357, 1990
HapII	CCGG	3 cut(s)	1607, 1721, 1923
HgaI	GACGC	2 cut(s)	1563, 1731
HhaI	GCGC	2 cut(s)	85, 1497
Hin1II	CATG	9 cut(s)	32, 68, 99, 340, 1223, 1229, 1325, 1762, 1858
Hin6I	GCGC	2 cut(s)	83, 1495
HinP1I	GCGC	2 cut(s)	83, 1495
HincII	GTYRAC	3 cut(s)	1150, 1261, 1852
HindII	GTYRAC	3 cut(s)	1150, 1261, 1852
HpaII	CCGG	3 cut(s)	1607, 1721, 1923
Hpy166II	GTNNAC	4 cut(s)	1150, 1261, 1852, 1947
Hpy188III	TCNNGA	7 cut(s)	188, 452, 969, 1158, 1629, 1784, 1831
Hpy8I	GTNNAC	4 cut(s)	1150, 1261, 1852, 1947
HpyAV	CCTTC	3 cut(s)	668, 1496, 1726
HpyCH4III	ACNGT	5 cut(s)	785, 802, 919, 1252, 1429
HpyCH4IV	ACGT	1 cut(s)	1839
HpyF10VI	GCNNNNNNNGC	5 cut(s)	29, 956, 1503, 1589, 1817
HpyF3I	CTNAG	7 cut(s)	594, 762, 903, 953, 1351, 1602, 1812
HpySE526I	ACGT	1 cut(s)	1839
Hsp92II	CATG	9 cut(s)	32, 68, 99, 340, 1223, 1229, 1325, 1762, 1858
HspAI	GCGC	2 cut(s)	83, 1495
Ksp22I	TGATCA	2 cut(s)	1363, 1900
LguI	GCTCTTC	1 cut(s)	1392
LmnI	GCTCC	1 cut(s)	1433
Lsp1109I	GCAGC	4 cut(s)	341, 550, 1228, 1869
LweI	GCATC	7 cut(s)	78, 209, 502, 507, 1014, 1515, 1807
MabI	ACCWGGT	1 cut(s)	1015
MaeI	CTAG	5 cut(s)	273, 1040, 1158, 1278, 1956
MaeII	ACGT	1 cut(s)	1839
MaeIII	GTNAC	5 cut(s)	317, 364, 1327, 2008, 2030
MboII	GAAGA	8 cut(s)	218, 316, 448, 1088, 1379, 1501, 1525, 2017
MfeI	CAATTG	1 cut(s)	127
MflI	RGATCY	2 cut(s)	403, 1609
MhlI	GDGCHC	4 cut(s)	346, 952, 1387, 2065
MlsI	TGGCCA	2 cut(s)	807, 818
MluNI	TGGCCA	2 cut(s)	807, 818
MlyI	GAGTC	4 cut(s)	399, 629, 1268, 1836
MmeI	TCCRAC	2 cut(s)	1411, 1822
Mox20I	TGGCCA	2 cut(s)	807, 818
MroXI	GAANNNNTTC	1 cut(s)	551
MscI	TGGCCA	2 cut(s)	807, 818
MseI	TTAA	5 cut(s)	873, 1049, 1083, 1452, 1680
MslI	CAYNNNNRTG	4 cut(s)	512, 875, 1224, 1296
Msp20I	TGGCCA	2 cut(s)	807, 818
MspA1I	CMGCKG	1 cut(s)	1271
MspCI	CTTAAG	1 cut(s)	1679
MspI	CCGG	3 cut(s)	1607, 1721, 1923
MspR9I	CCNGG	9 cut(s)	460, 570, 611, 699, 828, 1017, 1472, 1924, 1992
MunI	CAATTG	1 cut(s)	127
MvaI	CCWGG	8 cut(s)	460, 570, 611, 699, 828, 1017, 1472, 1992
MwoI	GCNNNNNNNGC	5 cut(s)	29, 956, 1503, 1589, 1817
NciI	CCSGG	1 cut(s)	1924
NheI	GCTAGC	1 cut(s)	272
NlaIII	CATG	9 cut(s)	32, 68, 99, 340, 1223, 1229, 1325, 1762, 1858
NlaIV	GGNNCC	4 cut(s)	1030, 1611, 1725, 2062
NmeAIII	GCCGAG	1 cut(s)	1774
NmuCI	GTSAC	5 cut(s)	317, 364, 1327, 2008, 2030
NsbI	TGCGCA	2 cut(s)	84, 1496
NspI	RCATGY	1 cut(s)	1223
PasI	CCCWGGG	1 cut(s)	610
PciSI	GCTCTTC	1 cut(s)	1392
PdmI	GAANNNNTTC	1 cut(s)	551
PfeI	GAWTC	6 cut(s)	38, 430, 972, 1107, 1231, 1670
PflFI	GACNNNGTC	3 cut(s)	442, 1017, 1856
PflMI	CCANNNNNTGG	2 cut(s)	616, 814
PfoI	TCCNGGA	2 cut(s)	826, 1470
PkrI	GCNGC	5 cut(s)	331, 565, 1218, 1884, 2043
PleI	GAGTC	4 cut(s)	398, 628, 1268, 1835
PpsI	GAGTC	4 cut(s)	398, 628, 1268, 1835
PshBI	ATTAAT	2 cut(s)	873, 1452
PsiI	TTATAA	1 cut(s)	539
Psp124BI	GAGCTC	1 cut(s)	1387
Psp6I	CCWGG	8 cut(s)	458, 568, 609, 697, 826, 1015, 1470, 1990
PspGI	CCWGG	8 cut(s)	458, 568, 609, 697, 826, 1015, 1470, 1990
PspN4I	GGNNCC	4 cut(s)	1030, 1611, 1725, 2062
PspPI	GGNCC	4 cut(s)	987, 1013, 1355, 1988
PstI	CTGCAG	2 cut(s)	331, 1887
PstNI	CAGNNNCTG	1 cut(s)	91
PsuI	RGATCY	2 cut(s)	403, 1609
PsyI	GACNNNGTC	3 cut(s)	442, 1017, 1856
PvuII	CAGCTG	1 cut(s)	1271
RsaI	GTAC	6 cut(s)	703, 823, 908, 1224, 1519, 1892
RsaNI	GTAC	6 cut(s)	702, 822, 907, 1223, 1518, 1891
RseI	CAYNNNNRTG	4 cut(s)	512, 875, 1224, 1296
SacI	GAGCTC	1 cut(s)	1387
SapI	GCTCTTC	1 cut(s)	1392
SaqAI	TTAA	5 cut(s)	873, 1049, 1083, 1452, 1680
SatI	GCNGC	5 cut(s)	330, 564, 1217, 1883, 2042
Sau96I	GGNCC	4 cut(s)	987, 1013, 1355, 1988
ScaI	AGTACT	1 cut(s)	823
SchI	GAGTC	4 cut(s)	399, 629, 1268, 1836
ScrFI	CCNGG	9 cut(s)	460, 570, 611, 699, 828, 1017, 1472, 1924, 1992
SduI	GDGCHC	4 cut(s)	346, 952, 1387, 2065
SexAI	ACCWGGT	1 cut(s)	1015
SfaNI	GCATC	7 cut(s)	78, 209, 502, 507, 1014, 1515, 1807
SfcI	CTRYAG	5 cut(s)	327, 394, 784, 918, 1883
SinI	GGWCC	2 cut(s)	987, 1013
SmiMI	CAYNNNNRTG	4 cut(s)	512, 875, 1224, 1296
SmlI	CTYRAG	5 cut(s)	215, 891, 1070, 1679, 1831
SmoI	CTYRAG	5 cut(s)	215, 891, 1070, 1679, 1831
SsiI	CCGC	5 cut(s)	931, 1142, 1309, 2019, 2041
SspI	AATATT	4 cut(s)	289, 913, 1370, 1491
SspMI	CTAG	5 cut(s)	273, 1040, 1158, 1278, 1956
SstI	GAGCTC	1 cut(s)	1387
StyD4I	CCNGG	9 cut(s)	458, 568, 609, 697, 826, 1015, 1470, 1922, 1990
StyI	CCWWGG	2 cut(s)	1613, 2056
TaaI	ACNGT	5 cut(s)	785, 802, 919, 1252, 1429
TaiI	ACGT	1 cut(s)	1842
TaqI	TCGA	2 cut(s)	1045, 1779
TatI	WGTACW	4 cut(s)	821, 906, 1222, 1890
TauI	GCSGC	1 cut(s)	2044
TfiI	GAWTC	6 cut(s)	38, 430, 972, 1107, 1231, 1670
Tru1I	TTAA	5 cut(s)	873, 1049, 1083, 1452, 1680
Tru9I	TTAA	5 cut(s)	873, 1049, 1083, 1452, 1680
TseFI	GTSAC	5 cut(s)	317, 364, 1327, 2008, 2030
TseI	GCWGC	4 cut(s)	329, 563, 1216, 1882
Tsp45I	GTSAC	5 cut(s)	317, 364, 1327, 2008, 2030
TspDTI	ATGAA	5 cut(s)	615, 1310, 1434, 1747, 2040
TspGWI	ACGGA	1 cut(s)	1135
Tth111I	GACNNNGTC	3 cut(s)	442, 1017, 1856
Van91I	CCANNNNNTGG	2 cut(s)	616, 814
Vha464I	CTTAAG	1 cut(s)	1679
VpaK11BI	GGWCC	2 cut(s)	987, 1013
VspI	ATTAAT	2 cut(s)	873, 1452
XapI	RAATTY	4 cut(s)	50, 579, 1317, 1754
XbaI	TCTAGA	1 cut(s)	1157
XceI	RCATGY	1 cut(s)	1223
XcmI	CCANNNNNNNNNTGG	1 cut(s)	997
XmnI	GAANNNNTTC	1 cut(s)	551
XspI	CTAG	5 cut(s)	273, 1040, 1158, 1278, 1956
ZrmI	AGTACT	1 cut(s)	823

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.