pycom10g07280
MYB Family

Myb-like DNA-binding domain

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Forward (+)
8511880 .. 8514184
2305 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g07280.4

Sequence Viewer

Length: 1191 bp
ATGTCTTCGGTTCCTCCAGAACTGAGCTTGGATTTTAGACCCATGTTTGTGCCCAAAACGATCAGTGATTTCCTCAAGGAGGTTTCAATGATCGGAAATGTGTCCGAGAGGCTGTCCAAGCTTGACGATTTTGTCAATAGATTGGAGGACGAGATGAGGAAGATCGACGCCTTCAAGCGCGAGCTTCCTCTCTGCATGCTCCTCTTAAACGATGTGATTCGAGCTCTGAAGGAAGAAGCAATGCAATGTACGGCTCCAGATATTCAACCAGTGCTGGAAGAATTCATACCACTGAAGAATGATTGTGATAAAAACAAGGGAGGAAGTAGCAATAACAATAAGAAAGAAAAAGACTCTAGGGATAAGAAGAATTGGATGAGCTCTGTTCAGCTTTGGAACACTGATAATTATCAACAACATCCCTCTAGTGATTTCCCATATGATCGAAAGCGAGTTTCCGAAATTGATTCTAAGAGAAATGAAGCAGAAAACGGGGTAGCAAATGAGGATCGTTTCCAGACATGTGGAAATAGGACTGGAGGAAAAGCATTTATGCCATTTAAGGGGTACCCTGCTTTTTCTGTGACGCCGGTAAGGCTAGAAGAGAAGGAGGAATTGCCAGTTCGTGGGCTGTCTCTGCTCACTCCAGGGATTAAGAATCCAAGGGAGGAATCGACTTCCAGTGGTTCAAGATCCACTTGTGGCCGGTCAACCTCCTTCCCTACTGCCAATGCTCAATCCAATATGCGCACTCTGCCGCAGCAGCCAACTAGCCGGAAACAGAGAAGGTGTTGGTCGCCGGAGTTGCATCGGAGATTCGTCAATACCTTGCAGCAACTTGGAGGTTCACAAGTGGCCACACCAAAGCAAATTAGGGAACTTATGCAGGTTGATGGCTTGACGAATGACGAAGTGAAGAGCCATTTGCAGAAATACCGACTTCACACAAGAAGAGTTCCAGGCGCCACAACAGCAGCCCCGAAAAATCAAGCTGTTGTTTTGGGGGGTTTGTGGACGTCCCATGATCAATACACAGACTCTTCAAAGGCTAGTAGTTCCCAGTCTGGCTCACCCCAAGGTCCCCTCCAATTAACCGGAACTGGTCGAGATGACGAAGATGATGAAGATGCAAAATCCGAAAGTCATAGCTGGAAAGGTCACATTCACAAACCCGGAAAAGATGATGTATAG

Protein Analysis

397

Amino Acids

44.55

Weight (kDa)

8.4

Isoelectric Point (pI)

57.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 131
AatII GACGTC 1 cut(s) 1019
Acc16I TGCGCA 1 cut(s) 749
Acc36I ACCTGC 1 cut(s) 877
Acc65I GGTACC 1 cut(s) 567
AccB1I GGYRCC 2 cut(s) 567, 962
AccB7I CCANNNNNTGG 1 cut(s) 626
AccII CGCG 1 cut(s) 180
AciI CCGC 1 cut(s) 758
AclWI GGATC 2 cut(s) 516, 687
AcoI YGGCCR 2 cut(s) 703, 855
AcsI RAATTY 1 cut(s) 281
AcuI CTGAAG 2 cut(s) 248, 314
AcyI GRCGYC 4 cut(s) 168, 587, 963, 1016
AfaI GTAC 2 cut(s) 250, 569
AfiI CCNNNNNNNGG 3 cut(s) 79, 563, 626
AflIII ACRYGT 1 cut(s) 521
AgsI TTSAA 5 cut(s) 87, 175, 266, 690, 1044
AjnI CCWGG 2 cut(s) 646, 958
AluBI AGCT 8 cut(s) 27, 121, 184, 224, 381, 391, 992, 1149
AluI AGCT 8 cut(s) 27, 121, 184, 224, 381, 391, 992, 1149
Alw21I GWGCWC 2 cut(s) 226, 383
Alw26I GTCTC 1 cut(s) 639
AlwI GGATC 2 cut(s) 516, 687
AoxI GGCC 2 cut(s) 703, 855
ApeKI GCWGC 4 cut(s) 760, 763, 832, 974
ApoI RAATTY 1 cut(s) 281
Asp718I GGTACC 1 cut(s) 567
AspLEI GCGC 3 cut(s) 180, 750, 965
AspS9I GGNCC 1 cut(s) 1079
AsuC2I CCSGG 1 cut(s) 1173
AsuHPI GGTGA 1 cut(s) 1062
AvaII GGWCC 1 cut(s) 1079
BaeGI GKGCMC 1 cut(s) 54
BalI TGGCCA 1 cut(s) 857
BanI GGYRCC 2 cut(s) 567, 962
BanII GRGCYC 2 cut(s) 226, 383
BarI GAAGNNNNNNTAC 2 cut(s) 270, 302
Bbv12I GWGCWC 2 cut(s) 226, 383
BbvI GCAGC 4 cut(s) 772, 775, 844, 986
BccI CCATC 1 cut(s) 887
BceAI ACGGC 1 cut(s) 267
BciT130I CCWGG 2 cut(s) 648, 960
BclI TGATCA 1 cut(s) 1024
BcnI CCSGG 1 cut(s) 1173
BcoDI GTCTC 1 cut(s) 639
BfaI CTAG 5 cut(s) 357, 426, 599, 771, 1050
BfoI RGCGCY 1 cut(s) 966
BfuAI ACCTGC 1 cut(s) 877
BglI GCCNNNNNGGC 1 cut(s) 595
BisI GCNGC 5 cut(s) 758, 761, 764, 833, 975
BlsI GCNGC 5 cut(s) 759, 762, 765, 834, 976
Bme1390I CCNGG 3 cut(s) 648, 960, 1173
Bme18I GGWCC 1 cut(s) 1079
BmgT120I GGNCC 1 cut(s) 1079
BmiI GGNNCC 5 cut(s) 12, 255, 569, 964, 1081
BmrFI CCNGG 3 cut(s) 648, 960, 1173
BmrI ACTGGG 1 cut(s) 1054
BmsI GCATC 2 cut(s) 817, 1117
BmuI ACTGGG 1 cut(s) 1054
BpmI CTGGAG 3 cut(s) 240, 558, 630
BpuEI CTTGAG 1 cut(s) 59
BpuMI CCSGG 1 cut(s) 1173
BsaBI GATNNNNATC 1 cut(s) 408
BsaHI GRCGYC 4 cut(s) 168, 587, 963, 1016
BsaJI CCNNGG 3 cut(s) 647, 662, 1075
BsaWI WCCGGW 1 cut(s) 1094
Bsc4I CCNNNNNNNGG 3 cut(s) 79, 563, 626
Bse118I RCCGGY 2 cut(s) 589, 705
Bse1I ACTGG 6 cut(s) 269, 541, 620, 681, 1060, 1105
Bse3DI GCAATG 2 cut(s) 246, 251
Bse8I GATNNNNATC 1 cut(s) 408
BseBI CCWGG 2 cut(s) 648, 960
BseDI CCNNGG 3 cut(s) 647, 662, 1075
BseGI GGATG 2 cut(s) 381, 418
BseJI GATNNNNATC 1 cut(s) 408
BseLI CCNNNNNNNGG 3 cut(s) 79, 563, 626
BseMI GCAATG 2 cut(s) 246, 251
BseMII CTCAG 1 cut(s) 14
BseNI ACTGG 6 cut(s) 269, 541, 620, 681, 1060, 1105
BseRI GAGGAG 1 cut(s) 191
BseSI GKGCMC 1 cut(s) 54
BseXI GCAGC 4 cut(s) 772, 775, 844, 986
Bsh1236I CGCG 1 cut(s) 180
BshFI GGCC 2 cut(s) 705, 857
BshNI GGYRCC 2 cut(s) 567, 962
BsiHKAI GWGCWC 2 cut(s) 226, 383
BsiSI CCGG 6 cut(s) 590, 706, 775, 800, 1095, 1173
BslFI GGGAC 2 cut(s) 1003, 1065
BslI CCNNNNNNNGG 3 cut(s) 79, 563, 626
BsmAI GTCTC 1 cut(s) 639
BsmFI GGGAC 2 cut(s) 1003, 1065
BsnI GGCC 2 cut(s) 705, 857
Bsp1286I GDGCHC 3 cut(s) 54, 226, 383
Bsp143I GATC 7 cut(s) 60, 90, 162, 442, 508, 692, 1024
BspACI CCGC 1 cut(s) 758
BspANI GGCC 2 cut(s) 705, 857
BspCNI CTCAG 1 cut(s) 15
BspFNI CGCG 1 cut(s) 180
BspLI GGNNCC 5 cut(s) 12, 255, 569, 964, 1081
BspMI ACCTGC 1 cut(s) 877
BspPI GGATC 2 cut(s) 516, 687
BspQI GCTCTTC 1 cut(s) 911
BspT107I GGYRCC 2 cut(s) 567, 962
BsrDI GCAATG 2 cut(s) 246, 251
BsrFI RCCGGY 2 cut(s) 589, 705
BsrI ACTGG 6 cut(s) 269, 541, 620, 681, 1060, 1105
BssAI RCCGGY 2 cut(s) 589, 705
BssECI CCNNGG 3 cut(s) 647, 662, 1075
BssMI GATC 7 cut(s) 60, 90, 162, 442, 508, 692, 1024
BssNI GRCGYC 4 cut(s) 168, 587, 963, 1016
BssT1I CCWWGG 2 cut(s) 662, 1075
Bst2UI CCWGG 2 cut(s) 648, 960
Bst6I CTCTTC 4 cut(s) 597, 911, 946, 1045
BstACI GRCGYC 4 cut(s) 168, 587, 963, 1016
BstC8I GCNNGC 2 cut(s) 182, 197
BstDEI CTNAG 2 cut(s) 23, 471
BstENI CCTNNNNNAGG 1 cut(s) 77
BstF5I GGATG 2 cut(s) 381, 418
BstFNI CGCG 1 cut(s) 180
BstH2I RGCGCY 1 cut(s) 966
BstHHI GCGC 3 cut(s) 180, 750, 965
BstKTI GATC 7 cut(s) 63, 93, 165, 445, 511, 695, 1027
BstMAI GTCTC 1 cut(s) 639
BstMBI GATC 7 cut(s) 60, 90, 162, 442, 508, 692, 1024
BstMWI GCNNNNNNNGC 7 cut(s) 118, 595, 637, 754, 763, 805, 971
BstNI CCWGG 2 cut(s) 648, 960
BstNSI RCATGY 2 cut(s) 199, 525
BstSCI CCNGG 3 cut(s) 646, 958, 1171
BstSLI GKGCMC 1 cut(s) 54
BstUI CGCG 1 cut(s) 180
BstV1I GCAGC 4 cut(s) 772, 775, 844, 986
BstX2I RGATCY 1 cut(s) 692
BstXI CCANNNNNNTGG 1 cut(s) 524
BstYI RGATCY 1 cut(s) 692
BsuRI GGCC 2 cut(s) 705, 857
BtsCI GGATG 2 cut(s) 381, 418
BtsIMutI CAGTG 5 cut(s) 70, 276, 290, 399, 688
BveI ACCTGC 1 cut(s) 877
Cac8I GCNNGC 2 cut(s) 182, 197
CfoI GCGC 3 cut(s) 180, 750, 965
Cfr10I RCCGGY 2 cut(s) 589, 705
Cfr13I GGNCC 1 cut(s) 1079
CseI GACGC 2 cut(s) 176, 595
Csp6I GTAC 2 cut(s) 249, 568
CviAII CATG 4 cut(s) 43, 196, 522, 1022
CviQI GTAC 2 cut(s) 249, 568
DdeI CTNAG 2 cut(s) 23, 471
DinI GGCGCC 1 cut(s) 964
DpnI GATC 7 cut(s) 62, 92, 164, 444, 510, 694, 1026
DpnII GATC 7 cut(s) 60, 90, 162, 442, 508, 692, 1024
DrdI GACNNNNNNGTC 1 cut(s) 131
DseDI GACNNNNNNGTC 1 cut(s) 131
EaeI YGGCCR 2 cut(s) 703, 855
Eam1104I CTCTTC 4 cut(s) 597, 911, 946, 1045
EarI CTCTTC 4 cut(s) 597, 911, 946, 1045
Ecl136II GAGCTC 2 cut(s) 224, 381
Eco130I CCWWGG 2 cut(s) 662, 1075
Eco24I GRGCYC 2 cut(s) 226, 383
Eco47I GGWCC 1 cut(s) 1079
Eco53kI GAGCTC 2 cut(s) 224, 381
Eco57I CTGAAG 2 cut(s) 248, 314
EcoICRI GAGCTC 2 cut(s) 224, 381
EcoNI CCTNNNNNAGG 1 cut(s) 77
EcoO109I RGGNCCY 1 cut(s) 1079
EcoRI GAATTC 1 cut(s) 281
EcoRII CCWGG 2 cut(s) 646, 958
EcoT14I CCWWGG 2 cut(s) 662, 1075
EcoT38I GRGCYC 2 cut(s) 226, 383
EgeI GGCGCC 1 cut(s) 964
EheI GGCGCC 1 cut(s) 964
ErhI CCWWGG 2 cut(s) 662, 1075
FaeI CATG 4 cut(s) 46, 199, 525, 1025
FalI AAGNNNNNCTT 2 cut(s) 682, 714
FaqI GGGAC 2 cut(s) 1003, 1065
FatI CATG 4 cut(s) 42, 195, 521, 1021
FauNDI CATATG 1 cut(s) 439
FbaI TGATCA 1 cut(s) 1024
Fnu4HI GCNGC 5 cut(s) 758, 761, 764, 833, 975
FokI GGATG 2 cut(s) 388, 405
FriOI GRGCYC 2 cut(s) 226, 383
Fsp4HI GCNGC 5 cut(s) 758, 761, 764, 833, 975
FspAI RTGCGCAY 1 cut(s) 749
FspBI CTAG 5 cut(s) 357, 426, 599, 771, 1050
FspI TGCGCA 1 cut(s) 749
GlaI GCGC 3 cut(s) 179, 749, 964
GluI GCNGC 5 cut(s) 758, 761, 764, 833, 975
GsuI CTGGAG 3 cut(s) 240, 558, 630
HaeII RGCGCY 1 cut(s) 966
HaeIII GGCC 2 cut(s) 705, 857
HapII CCGG 6 cut(s) 590, 706, 775, 800, 1095, 1173
HgaI GACGC 2 cut(s) 176, 595
HhaI GCGC 3 cut(s) 180, 750, 965
Hin1I GRCGYC 4 cut(s) 168, 587, 963, 1016
Hin1II CATG 4 cut(s) 46, 199, 525, 1025
Hin6I GCGC 3 cut(s) 178, 748, 963
HinP1I GCGC 3 cut(s) 178, 748, 963
HincII GTYRAC 1 cut(s) 711
HindII GTYRAC 1 cut(s) 711
HindIII AAGCTT 1 cut(s) 119
HinfI GANTC 7 cut(s) 217, 353, 467, 658, 671, 816, 1037
HpaII CCGG 6 cut(s) 590, 706, 775, 800, 1095, 1173
HphI GGTGA 1 cut(s) 1062
Hpy166II GTNNAC 3 cut(s) 711, 848, 1014
Hpy188I TCNGA 6 cut(s) 95, 106, 228, 460, 813, 1138
Hpy188III TCNNGA 5 cut(s) 17, 257, 517, 690, 1106
Hpy8I GTNNAC 3 cut(s) 711, 848, 1014
Hpy99I CGWCG 1 cut(s) 170
HpyAV CCTTC 5 cut(s) 181, 223, 601, 727, 780
HpyCH4IV ACGT 1 cut(s) 1016
HpyCH4V TGCA 7 cut(s) 195, 244, 808, 832, 886, 928, 1130
HpyF10VI GCNNNNNNNGC 7 cut(s) 118, 595, 637, 754, 763, 805, 971
HpyF3I CTNAG 2 cut(s) 23, 471
HpySE526I ACGT 1 cut(s) 1016
Hsp92I GRCGYC 4 cut(s) 168, 587, 963, 1016
Hsp92II CATG 4 cut(s) 46, 199, 525, 1025
HspAI GCGC 3 cut(s) 178, 748, 963
KasI GGCGCC 1 cut(s) 962
KpnI GGTACC 1 cut(s) 571
Ksp22I TGATCA 1 cut(s) 1024
Kzo9I GATC 7 cut(s) 60, 90, 162, 442, 508, 692, 1024
LguI GCTCTTC 1 cut(s) 911
LmnI GCTCC 2 cut(s) 204, 259
Lsp1109I GCAGC 4 cut(s) 772, 775, 844, 986
LweI GCATC 2 cut(s) 817, 1117
MaeI CTAG 5 cut(s) 357, 426, 599, 771, 1050
MaeII ACGT 1 cut(s) 1016
MaeIII GTNAC 2 cut(s) 583, 1157
MalI GATC 7 cut(s) 62, 92, 164, 444, 510, 694, 1026
MboI GATC 7 cut(s) 60, 90, 162, 442, 508, 692, 1024
MflI RGATCY 1 cut(s) 692
MhlI GDGCHC 3 cut(s) 54, 226, 383
MlsI TGGCCA 1 cut(s) 857
MluCI AATT 7 cut(s) 281, 370, 406, 462, 614, 870, 1088
MluNI TGGCCA 1 cut(s) 857
Mly113I GGCGCC 1 cut(s) 963
MlyI GAGTC 2 cut(s) 347, 1031
Mox20I TGGCCA 1 cut(s) 857
MscI TGGCCA 1 cut(s) 857
MseI TTAA 4 cut(s) 206, 561, 654, 1091
MslI CAYNNNNRTG 1 cut(s) 47
Msp20I TGGCCA 1 cut(s) 857
MspI CCGG 6 cut(s) 590, 706, 775, 800, 1095, 1173
MspR9I CCNGG 3 cut(s) 648, 960, 1173
MvaI CCWGG 2 cut(s) 648, 960
MvnI CGCG 1 cut(s) 180
MwoI GCNNNNNNNGC 7 cut(s) 118, 595, 637, 754, 763, 805, 971
NarI GGCGCC 1 cut(s) 963
NciI CCSGG 1 cut(s) 1173
NdeI CATATG 1 cut(s) 439
NdeII GATC 7 cut(s) 60, 90, 162, 442, 508, 692, 1024
NlaIII CATG 4 cut(s) 46, 199, 525, 1025
NlaIV GGNNCC 5 cut(s) 12, 255, 569, 964, 1081
NmuCI GTSAC 2 cut(s) 583, 1157
NsbI TGCGCA 1 cut(s) 749
NspI RCATGY 2 cut(s) 199, 525
PaeI GCATGC 1 cut(s) 199
PciI ACATGT 1 cut(s) 521
PciSI GCTCTTC 1 cut(s) 911
PfeI GAWTC 5 cut(s) 217, 467, 658, 671, 816
PflMI CCANNNNNTGG 1 cut(s) 626
PkrI GCNGC 5 cut(s) 759, 762, 765, 834, 976
PleI GAGTC 2 cut(s) 347, 1031
PluTI GGCGCC 1 cut(s) 966
PpsI GAGTC 2 cut(s) 347, 1031
PpuMI RGGWCCY 1 cut(s) 1079
PscI ACATGT 1 cut(s) 521
Psp124BI GAGCTC 2 cut(s) 226, 383
Psp5II RGGWCCY 1 cut(s) 1079
Psp6I CCWGG 2 cut(s) 646, 958
PspGI CCWGG 2 cut(s) 646, 958
PspN4I GGNNCC 5 cut(s) 12, 255, 569, 964, 1081
PspPI GGNCC 1 cut(s) 1079
PspPPI RGGWCCY 1 cut(s) 1079
PsuI RGATCY 1 cut(s) 692
RsaI GTAC 2 cut(s) 250, 569
RsaNI GTAC 2 cut(s) 249, 568
RseI CAYNNNNRTG 1 cut(s) 47
SacI GAGCTC 2 cut(s) 226, 383
SapI GCTCTTC 1 cut(s) 911
SaqAI TTAA 4 cut(s) 206, 561, 654, 1091
SatI GCNGC 5 cut(s) 758, 761, 764, 833, 975
Sau3AI GATC 7 cut(s) 60, 90, 162, 442, 508, 692, 1024
Sau96I GGNCC 1 cut(s) 1079
SchI GAGTC 2 cut(s) 347, 1031
ScrFI CCNGG 3 cut(s) 648, 960, 1173
SduI GDGCHC 3 cut(s) 54, 226, 383
SfaNI GCATC 2 cut(s) 817, 1117
SfoI GGCGCC 1 cut(s) 964
SinI GGWCC 1 cut(s) 1079
SmiMI CAYNNNNRTG 1 cut(s) 47
SmlI CTYRAG 1 cut(s) 74
SmoI CTYRAG 1 cut(s) 74
SphI GCATGC 1 cut(s) 199
Sse9I AATT 7 cut(s) 281, 370, 406, 462, 614, 870, 1088
SsiI CCGC 1 cut(s) 758
SspDI GGCGCC 1 cut(s) 962
SspMI CTAG 5 cut(s) 357, 426, 599, 771, 1050
SstI GAGCTC 2 cut(s) 226, 383
StyD4I CCNGG 3 cut(s) 646, 958, 1171
StyI CCWWGG 2 cut(s) 662, 1075
TaiI ACGT 1 cut(s) 1019
TaqI TCGA 5 cut(s) 165, 220, 445, 674, 1105
TasI AATT 7 cut(s) 281, 370, 406, 462, 614, 870, 1088
TauI GCSGC 1 cut(s) 760
TfiI GAWTC 5 cut(s) 217, 467, 658, 671, 816
Tru1I TTAA 4 cut(s) 206, 561, 654, 1091
Tru9I TTAA 4 cut(s) 206, 561, 654, 1091
TscAI CASTG 5 cut(s) 70, 276, 297, 406, 688
TseFI GTSAC 2 cut(s) 583, 1157
TseI GCWGC 4 cut(s) 760, 763, 832, 974
Tsp45I GTSAC 2 cut(s) 583, 1157
TspDTI ATGAA 3 cut(s) 274, 495, 1137
TspRI CASTG 5 cut(s) 70, 276, 297, 406, 688
Van91I CCANNNNNTGG 1 cut(s) 626
VpaK11BI GGWCC 1 cut(s) 1079
XagI CCTNNNNNAGG 1 cut(s) 77
XapI RAATTY 1 cut(s) 281
XceI RCATGY 2 cut(s) 199, 525
XspI CTAG 5 cut(s) 357, 426, 599, 771, 1050
ZraI GACGTC 1 cut(s) 1017
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.