Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0006495

Physical Location & Seq

Genomic Coordinates Reverse (-)

78256987 .. 78259246

Gene Structure 2260 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0585600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2190 bp

ATGGCTGCAAATCATCCAATGGCTCAATGCTTAAGTTTCCTTCTCATTCTAATCTTCTTCTCTACACATATTCATGCATGCAGCCAAACAGAACGCACTTCTCTCTTGGCCTTCGCCCTCACTCTCTCTTCTCCTTCCTTGAATTGGACTTCCAGTAATTGTTGTCATTGGGAAGGCATCACTTGCAACCAAGATGATTTGGTCACCCAATTGAGCTTACCCTCAAAAGGCCTCAGACACAATGAAAGTATCTCTCCCTTATCATCTCTAGAAAATCTCACACATCTCACTTACCTCAATCTCTCTCGCAATTCCCTTTACGGTTCACCAGGTCAAACCAGATTGTTCTTGTCATTGAATCATCTTGAGATTCTTGATTTGAGCTATAACCTTCTATCTGGAGAACTACCAATTTTCCCACTATCCGGGAGTATCCGGATGCTGGATTTGTCCAGCAATTCTTTCAACGGTGAGGATCCATCCCACTCCCTTTGTTTCACTTCTTCTTCATTGATCAGAGTGTTGGATTTTTCTTTCAATAAATTCAACGGCAGAATATCTCCCGGACTAGGGCATTGTTCCAAGCTTAAGGTGTTTCGTGCTGGGAATAATAACCTCTCCGGAATACTTCCAGAAGATATGTATAATGTTACCACTCTTGAACAAATTTCATTACCTCTCAATTCACTTTACGGAGTCCTTAGTGGTCGCATTCTCAACCTCACAAACCTGGCAATCCTTGACCTCCAGTTTAATCAATTTAGCGGTGTGCTTCCTCTCCATTTTGGGAAGCTCTCCAAGTTGAAACTGTTGCTCCTTCAGATCAACAATCTAAGAGGCTCTCTGCCCCCATCTTTGATGAATTGCACAAGCCTTATAGAACTAAATTTAGGAGCCAATCACTTCGAAGGGGATTTGTCCATGTATAATTTCTCCAAACTTAGTAGGCTTCGTAAACTGGACCTGTTGAAGAATCAGTTCACAGGTACCTTCCCCACAAGCCTATACTCATGCAAGTTTCTCAAAGCAATTCGACTTGCTGCAAATGATATTGTGGGACAAATACAACCTGAAATTCTATCATTGAAATCCTTGTCCTTCCTCTCGCTTGCTCTCAATAGATTGACCAATATCACAGGGGCAATCAAGATACTCATGCATTGCAAAAGTCTCATATTCCTATCCTTAGGATCTAGTTTTGAAGAGGAGGAAGTTCCAGCTGATTTTGGCATGGCTGATTTTGATGGATTCCAAAATCTTCTATTTTTGGATTTGAGTCACAACGAGGTCACCGGTCAAATACCTATCTGGTTATTTAAGCTCAAGAAGCTGGAGGTCTTAAATCTGAATTCAAATAAATTCACAGGGCCAATTCCAAGTCTGCTATGGACTCTTCCTAGGCTCTTTTACGTAGACTTGGGATTCAACCTCATTTCTGGTGAATTTCCAAAGGAACTTTGCAGCCTGCCAATGCTGGTATCTCAAAACAACAACTTGTCCACTGATGATCTTGAATTGCCTATCTACTCCACAAAAGATGGTGGCAAGACAGGTGTACAATACAATTCTAATTTGTTGTACTATCCACGGTCAATATACCTAGGCAGCAATAGCTTAACTGGAAATATACCGATTGAGATTGGCCAATTGCAGCTTCTCCGTGCGTTGTCCCTTGAAAACAATTTCTTCACCGGCAAGATTCCAAACCAAATATCCAACCTCAAACAGTTGGCAAATTTGGATCTCTCCATGAATCATTTCTCTGGAAATATACCAGCATCATTAACAAGCCTTAATTTCTTGGCAGTATTTAATGTCTCGTTCAATAATCTGGAAGGCCAGATACCAACAGGCACTCAGTTCCAAAGCTTCAGTGAATCTGCATATGAGGGGAATCCCAACCTTTGTGGTCCTCCACTTCCAAATAAGTGCCAACCACTTCCAATTGATGGCATTGATGGAGATGATAACAACAGTAGATATGTCAACAGTGAACATCAAGTTCCATGGACTTTAGTTTCTGCTGTGCCTGGATTTGTTGTAGGATTTTGGGCAGTATGTGGTTCTTTGATATTTATCAAGACGTGGAGATATGCTTATTTCCGATTCCTCGATAATGCATATGATAGCCTCTATGTGATGATAGCTGTGGGGATCAAAAGGAGGAAGAGAAGGGTTAATGGAAGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000156 GO:0000160 GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007275 GO:0007568 GO:0008150 GO:0009653 GO:0009719 GO:0009723 GO:0009725 GO:0009735 GO:0009736 GO:0009755 GO:0009873 GO:0009888 GO:0009889 GO:0009987 GO:0010015 GO:0010033 GO:0010073 GO:0010075 GO:0010082 GO:0010119 GO:0010150 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022622 GO:0023052 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032870 GO:0035556 GO:0040008 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048364 GO:0048366 GO:0048367 GO:0048507 GO:0048509 GO:0048580 GO:0048638 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051239 GO:0051252 GO:0051716 GO:0060089 GO:0060255 GO:0065007 GO:0070887 GO:0071310 GO:0071368 GO:0071369 GO:0071495 GO:0080050 GO:0080090 GO:0080113 GO:0090693 GO:0099402 GO:0140110 GO:1903506 GO:1905392 GO:2000026 GO:2000112 GO:2000241 GO:2000280 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-binding

Protein Analysis

729

Amino Acids

80.97

Weight (kDa)

6.93

Isoelectric Point (pI)

35.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	29 - 63	2.7e-06	Leucine rich repeat N-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006495)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G49560 AT1G49560
fragaria_vesca	FvH4_2g06880 FvH4_2g06880 FvH4_2g06880
malus_domestica	MD05G1074600.v1.1 MD10G1089300.v1.1
prunus_persica	Prupe.4G176800_v2.0.a1 Prupe.8G116200_v2.0.a1 Prupe.8G116200_v2.0.a1
pyrus_communis	pycom05g06790 pycom10g07280
rosa_chinensis	RchiOBHm_Chr6g0259191
rosa_laevigata	RLG00000014550
rosa_multiflora	Rmu_ssc0000050.1_g000098 Rmu_ssc0000114.1_g000052
rosa_roxburghii	Rroxscaffold_4G00317960 Rroxscaffold_7G00206320 Rroxscaffold_7G00206490
rosa_rugosa	Rorug05G0585500 Rorug05G0585600
rosa_samantha	Rh6AG102500 Rh6BG094800 Rh6CG091900 Rh6DG085900
rosa_wichuraiana	Rw6G008860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	986
AccB1I	GGYRCC	1 cut(s)	986
AccB7I	CCANNNNNTGG	1 cut(s)	1949
AccI	GTMKAC	1 cut(s)	1413
AccIII	TCCGGA	2 cut(s)	435, 620
AciI	CCGC	1 cut(s)	765
AclWI	GGATC	5 cut(s)	470, 483, 1198, 1749, 2162
AcoI	YGGCCR	1 cut(s)	1642
AcsI	RAATTY	8 cut(s)	542, 666, 886, 1074, 1348, 1358, 1442, 1735
AcuI	CTGAAG	2 cut(s)	803, 1855
AfaI	GTAC	3 cut(s)	988, 1557, 1580
AfiI	CCNNNNNNNGG	7 cut(s)	144, 227, 425, 442, 569, 570, 1949
AflII	CTTAAG	2 cut(s)	31, 587
AgeI	ACCGGT	1 cut(s)	1292
AjiI	CACGTC	1 cut(s)	2085
AjnI	CCWGG	3 cut(s)	328, 729, 2029
AjuI	GAANNNNNNNTTGG	2 cut(s)	1638, 1670
Alw26I	GTCTC	2 cut(s)	1175, 1822
AlwI	GGATC	5 cut(s)	470, 483, 1198, 1749, 2162
Aor13HI	TCCGGA	2 cut(s)	435, 620
AoxI	GGCC	5 cut(s)	108, 229, 1367, 1642, 1837
ApeKI	GCWGC	6 cut(s)	5, 81, 1040, 1461, 1605, 1651
ApoI	RAATTY	8 cut(s)	542, 666, 886, 1074, 1348, 1358, 1442, 1735
AsiGI	ACCGGT	1 cut(s)	1292
Asp700I	GAANNNNTTC	2 cut(s)	977, 1757
Asp718I	GGTACC	1 cut(s)	986
AspA2I	CCTAGG	2 cut(s)	1397, 1600
AspS9I	GGNCC	3 cut(s)	961, 1367, 1910
AsuC2I	CCSGG	2 cut(s)	427, 564
AsuHPI	GGTGA	6 cut(s)	196, 318, 482, 1282, 1451, 1681
AsuII	TTCGAA	1 cut(s)	906
AvaII	GGWCC	2 cut(s)	961, 1910
AvrII	CCTAGG	2 cut(s)	1397, 1600
AxyI	CCTNAGG	1 cut(s)	1186
BalI	TGGCCA	1 cut(s)	1644
BamHI	GGATCC	1 cut(s)	475
BanI	GGYRCC	1 cut(s)	986
BarI	GAAGNNNNNNTAC	2 cut(s)	1827, 1859
BbvI	GCAGC	5 cut(s)	93, 1027, 1473, 1617, 1663
BccI	CCATC	6 cut(s)	487, 859, 1238, 1532, 1943, 1952
BceAI	ACGGC	1 cut(s)	565
BciT130I	CCWGG	3 cut(s)	330, 731, 2031
BciVI	GTATCC	1 cut(s)	443
BclI	TGATCA	1 cut(s)	513
BcnI	CCSGG	2 cut(s)	427, 564
BcoDI	GTCTC	2 cut(s)	1175, 1822
BfaI	CTAG	6 cut(s)	269, 569, 1194, 1398, 1601, 2188
BfrI	CTTAAG	2 cut(s)	31, 587
BfuI	GTATCC	1 cut(s)	443
BisI	GCNGC	6 cut(s)	6, 82, 1041, 1462, 1606, 1652
BlnI	CCTAGG	2 cut(s)	1397, 1600
BlsI	GCNGC	6 cut(s)	7, 83, 1042, 1463, 1607, 1653
Bme1390I	CCNGG	5 cut(s)	330, 427, 564, 731, 2031
Bme18I	GGWCC	2 cut(s)	961, 1910
BmgBI	CACGTC	1 cut(s)	2085
BmgT120I	GGNCC	3 cut(s)	961, 1367, 1910
BmiI	GGNNCC	3 cut(s)	477, 895, 988
BmrFI	CCNGG	5 cut(s)	330, 427, 564, 731, 2031
BmsI	GCATC	3 cut(s)	186, 429, 1787
BpmI	CTGGAG	3 cut(s)	420, 731, 1352
Bpu14I	TTCGAA	1 cut(s)	906
BpuEI	CTTGAG	2 cut(s)	386, 1307
BpuMI	CCSGG	2 cut(s)	427, 564
BsaAI	YACGTR	1 cut(s)	1411
BsaBI	GATNNNNATC	1 cut(s)	2075
BsaJI	CCNNGG	4 cut(s)	1397, 1586, 1600, 2006
BsaWI	WCCGGW	3 cut(s)	435, 620, 1292
BsaXI	ACNNNNNCTCC	2 cut(s)	798, 828
Bsc4I	CCNNNNNNNGG	7 cut(s)	144, 227, 425, 442, 569, 570, 1949
Bse118I	RCCGGY	2 cut(s)	1292, 1691
Bse1I	ACTGG	4 cut(s)	153, 748, 963, 1624
Bse21I	CCTNAGG	1 cut(s)	1186
Bse3DI	GCAATG	1 cut(s)	1159
Bse8I	GATNNNNATC	1 cut(s)	2075
BseAI	TCCGGA	2 cut(s)	435, 620
BseBI	CCWGG	3 cut(s)	330, 731, 2031
BseDI	CCNNGG	4 cut(s)	1397, 1586, 1600, 2006
BseGI	GGATG	3 cut(s)	13, 444, 479
BseJI	GATNNNNATC	1 cut(s)	2075
BseLI	CCNNNNNNNGG	7 cut(s)	144, 227, 425, 442, 569, 570, 1949
BseMI	GCAATG	1 cut(s)	1159
BseMII	CTCAG	2 cut(s)	247, 1871
BseNI	ACTGG	4 cut(s)	153, 748, 963, 1624
BseRI	GAGGAG	1 cut(s)	1220
BseXI	GCAGC	5 cut(s)	93, 1027, 1473, 1617, 1663
BseYI	CCCAGC	1 cut(s)	602
BshFI	GGCC	5 cut(s)	110, 231, 1369, 1644, 1839
BshNI	GGYRCC	1 cut(s)	986
BshTI	ACCGGT	1 cut(s)	1292
BsiSI	CCGG	6 cut(s)	426, 436, 564, 621, 1293, 1692
BslFI	GGGAC	2 cut(s)	1071, 1654
BslI	CCNNNNNNNGG	7 cut(s)	144, 227, 425, 442, 569, 570, 1949
BsmAI	GTCTC	2 cut(s)	1175, 1822
BsmFI	GGGAC	2 cut(s)	1071, 1654
BsmI	GAATGC	1 cut(s)	711
BsnI	GGCC	5 cut(s)	110, 231, 1369, 1644, 1839
Bsp119I	TTCGAA	1 cut(s)	906
Bsp13I	TCCGGA	2 cut(s)	435, 620
Bsp1407I	TGTACA	1 cut(s)	1555
Bsp143I	GATC	7 cut(s)	475, 513, 822, 1190, 1507, 1741, 2154
Bsp19I	CCATGG	1 cut(s)	2006
BspACI	CCGC	1 cut(s)	765
BspANI	GGCC	5 cut(s)	110, 231, 1369, 1644, 1839
BspCNI	CTCAG	2 cut(s)	246, 1870
BspEI	TCCGGA	2 cut(s)	435, 620
BspLI	GGNNCC	3 cut(s)	477, 895, 988
BspPI	GGATC	5 cut(s)	470, 483, 1198, 1749, 2162
BspT104I	TTCGAA	1 cut(s)	906
BspT107I	GGYRCC	1 cut(s)	986
BspTI	CTTAAG	2 cut(s)	31, 587
BsrDI	GCAATG	1 cut(s)	1159
BsrFI	RCCGGY	2 cut(s)	1292, 1691
BsrGI	TGTACA	1 cut(s)	1555
BsrI	ACTGG	4 cut(s)	153, 748, 963, 1624
BssAI	RCCGGY	2 cut(s)	1292, 1691
BssECI	CCNNGG	4 cut(s)	1397, 1586, 1600, 2006
BssMI	GATC	7 cut(s)	475, 513, 822, 1190, 1507, 1741, 2154
BssT1I	CCWWGG	3 cut(s)	1397, 1600, 2006
Bst2UI	CCWGG	3 cut(s)	330, 731, 2031
Bst4CI	ACNGT	7 cut(s)	323, 470, 810, 1590, 1728, 1976, 1991
Bst6I	CTCTTC	4 cut(s)	133, 1197, 1398, 2162
BstAFI	CTTAAG	2 cut(s)	31, 587
BstAPI	GCANNNNNTGC	1 cut(s)	183
BstAUI	TGTACA	1 cut(s)	1555
BstBAI	YACGTR	1 cut(s)	1411
BstBI	TTCGAA	1 cut(s)	906
BstC8I	GCNNGC	3 cut(s)	79, 1110, 1466
BstDEI	CTNAG	6 cut(s)	233, 701, 833, 941, 1186, 1857
BstDSI	CCRYGG	2 cut(s)	1586, 2006
BstEII	GGTNACC	2 cut(s)	202, 1288
BstF5I	GGATG	3 cut(s)	13, 444, 479
BstKTI	GATC	7 cut(s)	478, 516, 825, 1193, 1510, 1744, 2157
BstMAI	GTCTC	2 cut(s)	1175, 1822
BstMBI	GATC	7 cut(s)	475, 513, 822, 1190, 1507, 1741, 2154
BstMWI	GCNNNNNNNGC	3 cut(s)	183, 1327, 1611
BstNI	CCWGG	3 cut(s)	330, 731, 2031
BstNSI	RCATGY	1 cut(s)	81
BstPI	GGTNACC	2 cut(s)	202, 1288
BstSCI	CCNGG	5 cut(s)	328, 425, 562, 729, 2029
BstSNI	TACGTA	1 cut(s)	1411
BstV1I	GCAGC	5 cut(s)	93, 1027, 1473, 1617, 1663
BstX2I	RGATCY	3 cut(s)	475, 1190, 1741
BstYI	RGATCY	3 cut(s)	475, 1190, 1741
Bsu36I	CCTNAGG	1 cut(s)	1186
BsuI	GTATCC	1 cut(s)	443
BsuRI	GGCC	5 cut(s)	110, 231, 1369, 1644, 1839
BtgI	CCRYGG	2 cut(s)	1586, 2006
BtrI	CACGTC	1 cut(s)	2085
BtsCI	GGATG	3 cut(s)	13, 444, 479
BtsIMutI	CAGTG	3 cut(s)	1500, 1879, 1996
Cac8I	GCNNGC	3 cut(s)	79, 1110, 1466
Cfr10I	RCCGGY	2 cut(s)	1292, 1691
Cfr13I	GGNCC	3 cut(s)	961, 1367, 1910
CsiI	ACCWGGT	1 cut(s)	328
Csp6I	GTAC	3 cut(s)	987, 1556, 1579
CspAI	ACCGGT	1 cut(s)	1292
CspCI	CAANNNNNGTGG	4 cut(s)	473, 508, 1888, 1923
CviAII	CATG	8 cut(s)	74, 78, 922, 1011, 1156, 1231, 1750, 2007
CviQI	GTAC	3 cut(s)	987, 1556, 1579
DdeI	CTNAG	6 cut(s)	233, 701, 833, 941, 1186, 1857
DpnI	GATC	7 cut(s)	477, 515, 824, 1192, 1509, 1743, 2156
DpnII	GATC	7 cut(s)	475, 513, 822, 1190, 1507, 1741, 2154
EaeI	YGGCCR	1 cut(s)	1642
Eam1104I	CTCTTC	4 cut(s)	133, 1197, 1398, 2162
EarI	CTCTTC	4 cut(s)	133, 1197, 1398, 2162
Eco105I	TACGTA	1 cut(s)	1411
Eco130I	CCWWGG	3 cut(s)	1397, 1600, 2006
Eco147I	AGGCCT	1 cut(s)	231
Eco47I	GGWCC	2 cut(s)	961, 1910
Eco57I	CTGAAG	2 cut(s)	803, 1855
Eco81I	CCTNAGG	1 cut(s)	1186
Eco91I	GGTNACC	2 cut(s)	202, 1288
EcoO65I	GGTNACC	2 cut(s)	202, 1288
EcoRI	GAATTC	1 cut(s)	1348
EcoRII	CCWGG	3 cut(s)	328, 729, 2029
EcoT14I	CCWWGG	3 cut(s)	1397, 1600, 2006
EcoT22I	ATGCAT	3 cut(s)	79, 1161, 2122
ErhI	CCWWGG	3 cut(s)	1397, 1600, 2006
FaeI	CATG	8 cut(s)	77, 81, 925, 1014, 1159, 1234, 1753, 2010
FaqI	GGGAC	2 cut(s)	1071, 1654
FatI	CATG	8 cut(s)	73, 77, 921, 1010, 1155, 1230, 1749, 2006
FauNDI	CATATG	2 cut(s)	1885, 2122
FbaI	TGATCA	1 cut(s)	513
FblI	GTMKAC	1 cut(s)	1413
Fnu4HI	GCNGC	6 cut(s)	6, 82, 1041, 1462, 1606, 1652
FokI	GGATG	2 cut(s)	451, 466
Fsp4HI	GCNGC	6 cut(s)	6, 82, 1041, 1462, 1606, 1652
FspBI	CTAG	6 cut(s)	269, 569, 1194, 1398, 1601, 2188
GluI	GCNGC	6 cut(s)	6, 82, 1041, 1462, 1606, 1652
GsaI	CCCAGC	1 cut(s)	606
GsuI	CTGGAG	3 cut(s)	420, 731, 1352
HaeIII	GGCC	5 cut(s)	110, 231, 1369, 1644, 1839
HapII	CCGG	6 cut(s)	426, 436, 564, 621, 1293, 1692
Hin1II	CATG	8 cut(s)	77, 81, 925, 1014, 1159, 1234, 1753, 2010
HincII	GTYRAC	1 cut(s)	1987
HindII	GTYRAC	1 cut(s)	1987
HindIII	AAGCTT	2 cut(s)	584, 1867
HpaII	CCGG	6 cut(s)	426, 436, 564, 621, 1293, 1692
HphI	GGTGA	6 cut(s)	196, 318, 482, 1282, 1451, 1681
Hpy166II	GTNNAC	8 cut(s)	326, 956, 981, 1414, 1500, 1556, 1987, 1994
Hpy188I	TCNGA	5 cut(s)	236, 518, 822, 1347, 2105
Hpy8I	GTNNAC	8 cut(s)	326, 956, 981, 1414, 1500, 1556, 1987, 1994
HpyCH4III	ACNGT	7 cut(s)	323, 470, 810, 1590, 1728, 1976, 1991
HpyCH4IV	ACGT	2 cut(s)	1410, 2084
HpyF10VI	GCNNNNNNNGC	3 cut(s)	183, 1327, 1611
HpyF3I	CTNAG	6 cut(s)	233, 701, 833, 941, 1186, 1857
HpySE526I	ACGT	2 cut(s)	1410, 2084
Hsp92II	CATG	8 cut(s)	77, 81, 925, 1014, 1159, 1234, 1753, 2010
Kpn2I	TCCGGA	2 cut(s)	435, 620
KpnI	GGTACC	1 cut(s)	990
Ksp22I	TGATCA	1 cut(s)	513
Kzo9I	GATC	7 cut(s)	475, 513, 822, 1190, 1507, 1741, 2154
LmnI	GCTCC	2 cut(s)	819, 893
Lsp1109I	GCAGC	5 cut(s)	93, 1027, 1473, 1617, 1663
LweI	GCATC	3 cut(s)	186, 429, 1787
MabI	ACCWGGT	1 cut(s)	328
MaeI	CTAG	6 cut(s)	269, 569, 1194, 1398, 1601, 2188
MaeII	ACGT	2 cut(s)	1410, 2084
MaeIII	GTNAC	4 cut(s)	202, 649, 1277, 1288
MalI	GATC	7 cut(s)	477, 515, 824, 1192, 1509, 1743, 2156
MboI	GATC	7 cut(s)	475, 513, 822, 1190, 1507, 1741, 2154
MfeI	CAATTG	3 cut(s)	209, 1646, 1944
MflI	RGATCY	3 cut(s)	475, 1190, 1741
MlsI	TGGCCA	1 cut(s)	1644
MluNI	TGGCCA	1 cut(s)	1644
MlyI	GAGTC	3 cut(s)	705, 1285, 1384
MmeI	TCCRAC	2 cut(s)	504, 1740
Mox20I	TGGCCA	1 cut(s)	1644
Mph1103I	ATGCAT	3 cut(s)	79, 1161, 2122
MroI	TCCGGA	2 cut(s)	435, 620
MroXI	GAANNNNTTC	2 cut(s)	977, 1757
MscI	TGGCCA	1 cut(s)	1644
MslI	CAYNNNNRTG	1 cut(s)	72
Msp20I	TGGCCA	1 cut(s)	1644
MspA1I	CMGCKG	1 cut(s)	1220
MspCI	CTTAAG	2 cut(s)	31, 587
MspI	CCGG	6 cut(s)	426, 436, 564, 621, 1293, 1692
MspR9I	CCNGG	5 cut(s)	330, 427, 564, 731, 2031
MunI	CAATTG	3 cut(s)	209, 1646, 1944
Mva1269I	GAATGC	1 cut(s)	711
MvaI	CCWGG	3 cut(s)	330, 731, 2031
MwoI	GCNNNNNNNGC	3 cut(s)	183, 1327, 1611
NciI	CCSGG	2 cut(s)	427, 564
NcoI	CCATGG	1 cut(s)	2006
NdeI	CATATG	2 cut(s)	1885, 2122
NdeII	GATC	7 cut(s)	475, 513, 822, 1190, 1507, 1741, 2154
NlaIII	CATG	8 cut(s)	77, 81, 925, 1014, 1159, 1234, 1753, 2010
NlaIV	GGNNCC	3 cut(s)	477, 895, 988
NmuCI	GTSAC	3 cut(s)	202, 1277, 1288
NsiI	ATGCAT	3 cut(s)	79, 1161, 2122
NspI	RCATGY	1 cut(s)	81
NspV	TTCGAA	1 cut(s)	906
PaeI	GCATGC	1 cut(s)	81
PceI	AGGCCT	1 cut(s)	231
PctI	GAATGC	1 cut(s)	711
PdmI	GAANNNNTTC	2 cut(s)	977, 1757
PflMI	CCANNNNNTGG	1 cut(s)	1949
PfoI	TCCNGGA	2 cut(s)	425, 562
PinAI	ACCGGT	1 cut(s)	1292
PkrI	GCNGC	6 cut(s)	7, 83, 1042, 1463, 1607, 1653
PleI	GAGTC	3 cut(s)	704, 1284, 1384
PpsI	GAGTC	3 cut(s)	704, 1284, 1384
Ppu21I	YACGTR	1 cut(s)	1411
Psp6I	CCWGG	3 cut(s)	328, 729, 2029
PspEI	GGTNACC	2 cut(s)	202, 1288
PspFI	CCCAGC	1 cut(s)	602
PspGI	CCWGG	3 cut(s)	328, 729, 2029
PspN4I	GGNNCC	3 cut(s)	477, 895, 988
PspPI	GGNCC	3 cut(s)	961, 1367, 1910
PsuI	RGATCY	3 cut(s)	475, 1190, 1741
PvuII	CAGCTG	1 cut(s)	1220
RsaI	GTAC	3 cut(s)	988, 1557, 1580
RsaNI	GTAC	3 cut(s)	987, 1556, 1579
RseI	CAYNNNNRTG	1 cut(s)	72
SatI	GCNGC	6 cut(s)	6, 82, 1041, 1462, 1606, 1652
Sau3AI	GATC	7 cut(s)	475, 513, 822, 1190, 1507, 1741, 2154
Sau96I	GGNCC	3 cut(s)	961, 1367, 1910
SchI	GAGTC	3 cut(s)	705, 1285, 1384
ScrFI	CCNGG	5 cut(s)	330, 427, 564, 731, 2031
SexAI	ACCWGGT	1 cut(s)	328
SfaNI	GCATC	3 cut(s)	186, 429, 1787
SfuI	TTCGAA	1 cut(s)	906
SinI	GGWCC	2 cut(s)	961, 1910
SmiMI	CAYNNNNRTG	1 cut(s)	72
SmlI	CTYRAG	4 cut(s)	31, 365, 587, 1322
SmoI	CTYRAG	4 cut(s)	31, 365, 587, 1322
SnaBI	TACGTA	1 cut(s)	1411
SphI	GCATGC	1 cut(s)	81
SseBI	AGGCCT	1 cut(s)	231
SsiI	CCGC	1 cut(s)	765
SspMI	CTAG	6 cut(s)	269, 569, 1194, 1398, 1601, 2188
StuI	AGGCCT	1 cut(s)	231
StyD4I	CCNGG	5 cut(s)	328, 425, 562, 729, 2029
StyI	CCWWGG	3 cut(s)	1397, 1600, 2006
TaaI	ACNGT	7 cut(s)	323, 470, 810, 1590, 1728, 1976, 1991
TaiI	ACGT	2 cut(s)	1413, 2087
TaqI	TCGA	3 cut(s)	906, 1033, 2112
TatI	WGTACW	2 cut(s)	1555, 1578
TscAI	CASTG	3 cut(s)	1507, 1879, 1996
TseFI	GTSAC	3 cut(s)	202, 1277, 1288
TseI	GCWGC	6 cut(s)	5, 81, 1040, 1461, 1605, 1651
Tsp45I	GTSAC	3 cut(s)	202, 1277, 1288
TspDTI	ATGAA	6 cut(s)	62, 258, 498, 660, 875, 1766
TspGWI	ACGGA	2 cut(s)	708, 1649
TspRI	CASTG	3 cut(s)	1507, 1879, 1996
Van91I	CCANNNNNTGG	1 cut(s)	1949
Vha464I	CTTAAG	2 cut(s)	31, 587
VpaK11BI	GGWCC	2 cut(s)	961, 1910
XapI	RAATTY	8 cut(s)	542, 666, 886, 1074, 1348, 1358, 1442, 1735
XbaI	TCTAGA	1 cut(s)	268
XceI	RCATGY	1 cut(s)	81
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1383
XmaJI	CCTAGG	2 cut(s)	1397, 1600
XmiI	GTMKAC	1 cut(s)	1413
XmnI	GAANNNNTTC	2 cut(s)	977, 1757
XspI	CTAG	6 cut(s)	269, 569, 1194, 1398, 1601, 2188
Zsp2I	ATGCAT	3 cut(s)	79, 1161, 2122

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.