pycom10g08990

Mitotic checkpoint protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Reverse (-)
11865298 .. 11868207
2910 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1026 bp
ATGACAGCTGTGCCTCCGCCGGCGCCAGGCCGAGAGCTCTCCAACCCCCCCACCGACGGCATCTCCAACCTCCGCTTCTCCAACCACAGCGATCACCTGCTCGTCTCCTCTTGGGACAAGACCGTCCGATTGTACGACGCCAGCGCCAATGTGCTGCGTGGAGAGTTCATGCACGGCGGTCCCGTACTCGATTGCTGCTTCCACGACGATTCCTCTGGGTTCAGCGCCGGCGCCGACAACACCGTCAGGCGGTTCGTATTCAGCTCCAGTAAGGAAGACATCTTAGGAAGGCACGACGCGCCAGTGCGTTGCATCGAGTACTCTTATGCAGCAGGGCAGTTGATCACTGGTAGTTGGGATAAAACAGTCAAGTGTTGGGACCCTAGAGGTGCAAGTGGACAGGAGCGAACTCTTGTTGGGTCATACCCACAACCCGAGCGTGTTTATTCTCTTTCACTTGTGGGAAACCGGTTAGTGGTTGCAACCGCCGGAAGACATGTCAATGTCTATGATTTGAGAAATATGTCCCAGCCTGAGCAACGGAGGGAGTCTTCGTTAAAGTACCAAACTCGATGTGTGCGTTGTTATCCTAATGGAACAGGTTATGCTCTTAGTTCTGTTGAAGGACGGGTTGCAATGGAATTTTTTGATCTTTCGGAGGCTAGTCAAACCAAAAAATATGCATTTAAGTGTCATAGAAAATCAGAGGCTGGAAGGGACATTGTGTACCCAGTAAATGCAATTGCATTCCACCCCATCTATGGTACTTTCGCTACTGGAGGTTGCGATGGCTATGTGAACGTATGGGATGGGAACAACAAGAAGAGGCTGTATCAGTACTCCAAGTACCCAACAAGCATTGCGGCGCTTTCTTTTAGCAGAGATGGCCGCCTATTGGCTGTGGCATCAAGTTACACGTATGAAGAGGGGGATAAACCCCACGAGCCAGATGCCATTTTCATTCGAAGCGTAAATGAGATAGAGGTCAAGCCAAAGCCAAAAGCGTACCCTAATCCGCCAGCGTAA
Functional Annotation

Protein Analysis

342

Amino Acids

37.86

Weight (kDa)

8.51

Isoelectric Point (pI)

45.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_WDR5 PF25175 18 - 231 1.2e-16 WDR5 beta-propeller domain
WD40_WDHD1_1st PF24817 19 - 128 3.4e-09 WDHD1 first WD40 domain
WD40_Prp19 PF24814 63 - 225 3.3e-08 Prp19 WD40 domain
Beta-prop_THOC3 PF25174 75 - 304 5.3e-24 THOC3 beta-propeller domain
WD40 PF00400 95 - 127 4.3e-06 WD domain, G-beta repeat
WD40_WDHD1_1st PF24817 146 - 293 2.9e-06 WDHD1 first WD40 domain
WD40_CDC20-Fz PF24807 146 - 295 1.1e-06 CDC20/Fizzy WD40 domain
Beta-prop_WDR3_1st PF25173 157 - 304 3.2e-08 WDR3 first beta-propeller domain
WD40_Prp19 PF24814 243 - 304 5.4e-06 Prp19 WD40 domain
Beta-prop_EML_2 PF23414 247 - 303 3e-06 Echinoderm microtubule-associated protein second beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012239)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 105
AasI GACNNNNNNGTC 2 cut(s) 122, 242
Acc36I ACCTGC 1 cut(s) 105
AccB1I GGYRCC 2 cut(s) 22, 230
AccII CGCG 1 cut(s) 299
AciI CCGC 8 cut(s) 17, 73, 177, 250, 486, 863, 889, 1016
AcoI YGGCCR 1 cut(s) 886
AcsI RAATTY 1 cut(s) 641
AcyI GRCGYC 3 cut(s) 23, 138, 231
AfaI GTAC 9 cut(s) 134, 186, 320, 563, 728, 766, 839, 848, 1007
AfiI CCNNNNNNNGG 6 cut(s) 26, 56, 249, 475, 761, 895
AflIII ACRYGT 2 cut(s) 496, 915
AgeI ACCGGT 1 cut(s) 468
AgsI TTSAA 1 cut(s) 623
AjnI CCWGG 1 cut(s) 25
AjuI GAANNNNNNNTTGG 2 cut(s) 59, 91
AluBI AGCT 3 cut(s) 8, 37, 264
AluI AGCT 3 cut(s) 8, 37, 264
Alw21I GWGCWC 1 cut(s) 39
Alw26I GTCTC 1 cut(s) 109
AlwNI CAGNNNCTG 1 cut(s) 710
Ama87I CYCGRG 1 cut(s) 434
AoxI GGCC 2 cut(s) 28, 886
ApeKI GCWGC 3 cut(s) 154, 195, 329
ApoI RAATTY 1 cut(s) 641
AsiGI ACCGGT 1 cut(s) 468
AspLEI GCGC 6 cut(s) 25, 146, 227, 233, 301, 868
AspS9I GGNCC 2 cut(s) 179, 379
AsuHPI GGTGA 1 cut(s) 86
AsuII TTCGAA 1 cut(s) 964
AvaI CYCGRG 1 cut(s) 434
AvaII GGWCC 2 cut(s) 179, 379
BanI GGYRCC 2 cut(s) 22, 230
BanII GRGCYC 1 cut(s) 39
BauI CACGAG 1 cut(s) 941
BbsI GAAGAC 3 cut(s) 282, 499, 543
Bbv12I GWGCWC 1 cut(s) 39
BbvI GCAGC 3 cut(s) 141, 182, 341
BccI CCATC 4 cut(s) 764, 782, 803, 878
BceAI ACGGC 2 cut(s) 73, 190
BcgI CGANNNNNNTGC 2 cut(s) 932, 966
BciT130I CCWGG 1 cut(s) 27
BclI TGATCA 1 cut(s) 342
BcoDI GTCTC 1 cut(s) 109
BfaI CTAG 2 cut(s) 384, 663
BfoI RGCGCY 5 cut(s) 26, 147, 228, 234, 869
BfuAI ACCTGC 1 cut(s) 105
BisI GCNGC 5 cut(s) 155, 196, 330, 864, 889
BlsI GCNGC 5 cut(s) 156, 197, 331, 865, 890
BmcAI AGTACT 2 cut(s) 320, 839
Bme1390I CCNGG 1 cut(s) 27
Bme18I GGWCC 2 cut(s) 179, 379
BmeT110I CYCGRG 1 cut(s) 434
BmgT120I GGNCC 2 cut(s) 179, 379
BmiI GGNNCC 5 cut(s) 24, 181, 232, 380, 381
BmrFI CCNGG 1 cut(s) 27
BmrI ACTGGG 1 cut(s) 725
BmsI GCATC 4 cut(s) 69, 321, 914, 940
BmuI ACTGGG 1 cut(s) 725
BpiI GAAGAC 3 cut(s) 282, 499, 543
BpmI CTGGAG 2 cut(s) 250, 798
Bpu10I CCTNAGC 1 cut(s) 534
Bpu14I TTCGAA 1 cut(s) 964
BsaAI YACGTR 1 cut(s) 918
BsaHI GRCGYC 3 cut(s) 23, 138, 231
BsaWI WCCGGW 1 cut(s) 468
BsaXI ACNNNNNCTCC 4 cut(s) 47, 77, 539, 569
Bsc4I CCNNNNNNNGG 6 cut(s) 26, 56, 249, 475, 761, 895
Bse118I RCCGGY 3 cut(s) 19, 227, 468
Bse1I ACTGG 5 cut(s) 267, 302, 352, 731, 781
Bse3DI GCAATG 2 cut(s) 642, 858
BseBI CCWGG 1 cut(s) 27
BseGI GGATG 1 cut(s) 814
BseLI CCNNNNNNNGG 6 cut(s) 26, 56, 249, 475, 761, 895
BseMI GCAATG 2 cut(s) 642, 858
BseMII CTCAG 1 cut(s) 525
BseNI ACTGG 5 cut(s) 267, 302, 352, 731, 781
BseRI GAGGAG 1 cut(s) 97
BseXI GCAGC 3 cut(s) 141, 182, 341
BseYI CCCAGC 1 cut(s) 528
Bsh1236I CGCG 1 cut(s) 299
BshFI GGCC 2 cut(s) 30, 888
BshNI GGYRCC 2 cut(s) 22, 230
BshTI ACCGGT 1 cut(s) 468
BsiHKAI GWGCWC 1 cut(s) 39
BsiHKCI CYCGRG 1 cut(s) 434
BsiSI CCGG 4 cut(s) 20, 228, 469, 489
BslFI GGGAC 5 cut(s) 128, 165, 392, 511, 731
BslI CCNNNNNNNGG 6 cut(s) 26, 56, 249, 475, 761, 895
BsmAI GTCTC 1 cut(s) 109
BsmBI CGTCTC 1 cut(s) 109
BsmFI GGGAC 5 cut(s) 128, 165, 392, 511, 731
BsmI GAATGC 1 cut(s) 746
BsnI GGCC 2 cut(s) 30, 888
BsoBI CYCGRG 1 cut(s) 434
Bsp119I TTCGAA 1 cut(s) 964
Bsp1286I GDGCHC 1 cut(s) 39
Bsp143I GATC 3 cut(s) 91, 342, 649
BspACI CCGC 8 cut(s) 17, 73, 177, 250, 486, 863, 889, 1016
BspANI GGCC 2 cut(s) 30, 888
BspCNI CTCAG 1 cut(s) 526
BspFNI CGCG 1 cut(s) 299
BspLI GGNNCC 5 cut(s) 24, 181, 232, 380, 381
BspMI ACCTGC 1 cut(s) 105
BspT104I TTCGAA 1 cut(s) 964
BspT107I GGYRCC 2 cut(s) 22, 230
BsrDI GCAATG 2 cut(s) 642, 858
BsrFI RCCGGY 3 cut(s) 19, 227, 468
BsrI ACTGG 5 cut(s) 267, 302, 352, 731, 781
BssAI RCCGGY 3 cut(s) 19, 227, 468
BssMI GATC 3 cut(s) 91, 342, 649
BssNI GRCGYC 3 cut(s) 23, 138, 231
BssSI CACGAG 1 cut(s) 941
Bst2BI CACGAG 1 cut(s) 941
Bst2UI CCWGG 1 cut(s) 27
Bst4CI ACNGT 3 cut(s) 124, 244, 367
Bst6I CTCTTC 2 cut(s) 818, 918
BstACI GRCGYC 3 cut(s) 23, 138, 231
BstBAI YACGTR 1 cut(s) 918
BstBI TTCGAA 1 cut(s) 964
BstC8I GCNNGC 4 cut(s) 21, 142, 229, 1020
BstDEI CTNAG 3 cut(s) 283, 534, 611
BstF5I GGATG 1 cut(s) 814
BstFNI CGCG 1 cut(s) 299
BstH2I RGCGCY 5 cut(s) 26, 147, 228, 234, 869
BstHHI GCGC 6 cut(s) 25, 146, 227, 233, 301, 868
BstKTI GATC 3 cut(s) 94, 345, 652
BstMAI GTCTC 1 cut(s) 109
BstMBI GATC 3 cut(s) 91, 342, 649
BstMWI GCNNNNNNNGC 2 cut(s) 298, 885
BstNI CCWGG 1 cut(s) 27
BstNSI RCATGY 1 cut(s) 500
BstSCI CCNGG 1 cut(s) 25
BstUI CGCG 1 cut(s) 299
BstV1I GCAGC 3 cut(s) 141, 182, 341
BstV2I GAAGAC 3 cut(s) 282, 499, 543
BsuRI GGCC 2 cut(s) 30, 888
BtgZI GCGATG 1 cut(s) 801
BtsCI GGATG 1 cut(s) 814
BtsIMutI CAGTG 2 cut(s) 309, 345
BveI ACCTGC 1 cut(s) 105
Cac8I GCNNGC 4 cut(s) 21, 142, 229, 1020
CaiI CAGNNNCTG 1 cut(s) 710
CfoI GCGC 6 cut(s) 25, 146, 227, 233, 301, 868
Cfr10I RCCGGY 3 cut(s) 19, 227, 468
Cfr13I GGNCC 2 cut(s) 179, 379
CseI GACGC 2 cut(s) 146, 305
Csp6I GTAC 9 cut(s) 133, 185, 319, 562, 727, 765, 838, 847, 1006
CspAI ACCGGT 1 cut(s) 468
CviAII CATG 2 cut(s) 169, 497
CviQI GTAC 9 cut(s) 133, 185, 319, 562, 727, 765, 838, 847, 1006
DdeI CTNAG 3 cut(s) 283, 534, 611
DinI GGCGCC 2 cut(s) 24, 232
DpnI GATC 3 cut(s) 93, 344, 651
DpnII GATC 3 cut(s) 91, 342, 649
DrdI GACNNNNNNGTC 2 cut(s) 122, 242
DseDI GACNNNNNNGTC 2 cut(s) 122, 242
EaeI YGGCCR 1 cut(s) 886
Eam1104I CTCTTC 2 cut(s) 818, 918
EarI CTCTTC 2 cut(s) 818, 918
EciI GGCGGA 2 cut(s) 6, 1005
Ecl136II GAGCTC 1 cut(s) 37
Eco24I GRGCYC 1 cut(s) 39
Eco47I GGWCC 2 cut(s) 179, 379
Eco53kI GAGCTC 1 cut(s) 37
Eco88I CYCGRG 1 cut(s) 434
EcoICRI GAGCTC 1 cut(s) 37
EcoO109I RGGNCCY 1 cut(s) 379
EcoRII CCWGG 1 cut(s) 25
EcoT22I ATGCAT 1 cut(s) 685
EcoT38I GRGCYC 1 cut(s) 39
EgeI GGCGCC 2 cut(s) 24, 232
EheI GGCGCC 2 cut(s) 24, 232
Esp3I CGTCTC 1 cut(s) 109
FaeI CATG 2 cut(s) 172, 500
FaqI GGGAC 5 cut(s) 128, 165, 392, 511, 731
FatI CATG 2 cut(s) 168, 496
FbaI TGATCA 1 cut(s) 342
Fnu4HI GCNGC 5 cut(s) 155, 196, 330, 864, 889
FokI GGATG 1 cut(s) 821
FriOI GRGCYC 1 cut(s) 39
Fsp4HI GCNGC 5 cut(s) 155, 196, 330, 864, 889
FspBI CTAG 2 cut(s) 384, 663
GlaI GCGC 6 cut(s) 24, 145, 226, 232, 300, 867
GluI GCNGC 5 cut(s) 155, 196, 330, 864, 889
GsaI CCCAGC 1 cut(s) 532
GsuI CTGGAG 2 cut(s) 250, 798
HaeII RGCGCY 5 cut(s) 26, 147, 228, 234, 869
HaeIII GGCC 2 cut(s) 30, 888
HapII CCGG 4 cut(s) 20, 228, 469, 489
HgaI GACGC 2 cut(s) 146, 305
HhaI GCGC 6 cut(s) 25, 146, 227, 233, 301, 868
Hin1I GRCGYC 3 cut(s) 23, 138, 231
Hin1II CATG 2 cut(s) 172, 500
Hin6I GCGC 6 cut(s) 23, 144, 225, 231, 299, 866
HinP1I GCGC 6 cut(s) 23, 144, 225, 231, 299, 866
HinfI GANTC 2 cut(s) 209, 548
HpaII CCGG 4 cut(s) 20, 228, 469, 489
HphI GGTGA 1 cut(s) 86
Hpy166II GTNNAC 3 cut(s) 398, 727, 799
Hpy188I TCNGA 3 cut(s) 128, 658, 706
Hpy8I GTNNAC 3 cut(s) 398, 727, 799
Hpy99I CGWCG 4 cut(s) 59, 140, 209, 299
HpyAV CCTTC 3 cut(s) 282, 617, 708
HpyCH4III ACNGT 3 cut(s) 124, 244, 367
HpyCH4IV ACGT 2 cut(s) 801, 917
HpyCH4V TGCA 9 cut(s) 172, 312, 329, 392, 482, 635, 683, 740, 746
HpyF10VI GCNNNNNNNGC 2 cut(s) 298, 885
HpyF3I CTNAG 3 cut(s) 283, 534, 611
HpySE526I ACGT 2 cut(s) 801, 917
Hsp92I GRCGYC 3 cut(s) 23, 138, 231
Hsp92II CATG 2 cut(s) 172, 500
HspAI GCGC 6 cut(s) 23, 144, 225, 231, 299, 866
KasI GGCGCC 2 cut(s) 22, 230
KflI GGGWCCC 1 cut(s) 379
KroI GCCGGC 2 cut(s) 19, 227
KroNI GCCGGC 2 cut(s) 21, 229
Ksp22I TGATCA 1 cut(s) 342
Kzo9I GATC 3 cut(s) 91, 342, 649
LmnI GCTCC 2 cut(s) 269, 403
Lsp1109I GCAGC 3 cut(s) 141, 182, 341
LweI GCATC 4 cut(s) 69, 321, 914, 940
MaeI CTAG 2 cut(s) 384, 663
MaeII ACGT 2 cut(s) 801, 917
MaeIII GTNAC 1 cut(s) 911
MalI GATC 3 cut(s) 93, 344, 651
MboI GATC 3 cut(s) 91, 342, 649
MboII GAAGA 5 cut(s) 287, 504, 543, 835, 935
MfeI CAATTG 1 cut(s) 741
MhlI GDGCHC 1 cut(s) 39
MluCI AATT 2 cut(s) 641, 741
Mly113I GGCGCC 2 cut(s) 23, 231
MlyI GAGTC 1 cut(s) 557
MmeI TCCRAC 3 cut(s) 66, 90, 105
Mph1103I ATGCAT 1 cut(s) 685
MreI CGCCGGCG 2 cut(s) 19, 227
MroNI GCCGGC 2 cut(s) 19, 227
MseI TTAA 2 cut(s) 557, 687
MslI CAYNNNNRTG 2 cut(s) 501, 688
MspA1I CMGCKG 1 cut(s) 8
MspI CCGG 4 cut(s) 20, 228, 469, 489
MspR9I CCNGG 1 cut(s) 27
MunI CAATTG 1 cut(s) 741
Mva1269I GAATGC 1 cut(s) 746
MvaI CCWGG 1 cut(s) 27
MvnI CGCG 1 cut(s) 299
MwoI GCNNNNNNNGC 2 cut(s) 298, 885
NaeI GCCGGC 2 cut(s) 21, 229
NarI GGCGCC 2 cut(s) 23, 231
NdeII GATC 3 cut(s) 91, 342, 649
NgoMIV GCCGGC 2 cut(s) 19, 227
NlaIII CATG 2 cut(s) 172, 500
NlaIV GGNNCC 5 cut(s) 24, 181, 232, 380, 381
NmeAIII GCCGAG 1 cut(s) 56
NsiI ATGCAT 1 cut(s) 685
NspI RCATGY 1 cut(s) 500
NspV TTCGAA 1 cut(s) 964
PaqCI CACCTGC 1 cut(s) 105
PciI ACATGT 1 cut(s) 496
PcsI WCGNNNNNNNCGW 2 cut(s) 180, 577
PctI GAATGC 1 cut(s) 746
PdiI GCCGGC 2 cut(s) 21, 229
PfeI GAWTC 1 cut(s) 209
PinAI ACCGGT 1 cut(s) 468
PkrI GCNGC 5 cut(s) 156, 197, 331, 865, 890
PleI GAGTC 1 cut(s) 556
PluTI GGCGCC 2 cut(s) 26, 234
PpsI GAGTC 1 cut(s) 556
Ppu21I YACGTR 1 cut(s) 918
PpuMI RGGWCCY 1 cut(s) 379
PscI ACATGT 1 cut(s) 496
Psp124BI GAGCTC 1 cut(s) 39
Psp5II RGGWCCY 1 cut(s) 379
Psp6I CCWGG 1 cut(s) 25
PspFI CCCAGC 1 cut(s) 528
PspGI CCWGG 1 cut(s) 25
PspN4I GGNNCC 5 cut(s) 24, 181, 232, 380, 381
PspPI GGNCC 2 cut(s) 179, 379
PspPPI RGGWCCY 1 cut(s) 379
PstNI CAGNNNCTG 1 cut(s) 710
PvuII CAGCTG 1 cut(s) 8
RsaI GTAC 9 cut(s) 134, 186, 320, 563, 728, 766, 839, 848, 1007
RsaNI GTAC 9 cut(s) 133, 185, 319, 562, 727, 765, 838, 847, 1006
RseI CAYNNNNRTG 2 cut(s) 501, 688
SacI GAGCTC 1 cut(s) 39
SaqAI TTAA 2 cut(s) 557, 687
SatI GCNGC 5 cut(s) 155, 196, 330, 864, 889
Sau3AI GATC 3 cut(s) 91, 342, 649
Sau96I GGNCC 2 cut(s) 179, 379
ScaI AGTACT 2 cut(s) 320, 839
SchI GAGTC 1 cut(s) 557
ScrFI CCNGG 1 cut(s) 27
SduI GDGCHC 1 cut(s) 39
SfaNI GCATC 4 cut(s) 69, 321, 914, 940
SfoI GGCGCC 2 cut(s) 24, 232
SfuI TTCGAA 1 cut(s) 964
SgrAI CRCCGGYG 2 cut(s) 19, 227
SinI GGWCC 2 cut(s) 179, 379
SmiMI CAYNNNNRTG 2 cut(s) 501, 688
Sse9I AATT 2 cut(s) 641, 741
SsiI CCGC 8 cut(s) 17, 73, 177, 250, 486, 863, 889, 1016
SspDI GGCGCC 2 cut(s) 22, 230
SspMI CTAG 2 cut(s) 384, 663
SstI GAGCTC 1 cut(s) 39
StyD4I CCNGG 1 cut(s) 25
TaaI ACNGT 3 cut(s) 124, 244, 367
TaiI ACGT 2 cut(s) 804, 920
TaqI TCGA 4 cut(s) 189, 315, 571, 964
TasI AATT 2 cut(s) 641, 741
TatI WGTACW 2 cut(s) 318, 837
TauI GCSGC 2 cut(s) 866, 891
TfiI GAWTC 1 cut(s) 209
Tru1I TTAA 2 cut(s) 557, 687
Tru9I TTAA 2 cut(s) 557, 687
TscAI CASTG 2 cut(s) 309, 352
TseI GCWGC 3 cut(s) 154, 195, 329
TspDTI ATGAA 3 cut(s) 157, 936, 949
TspGWI ACGGA 1 cut(s) 556
TspRI CASTG 2 cut(s) 309, 352
VpaK11BI GGWCC 2 cut(s) 179, 379
XapI RAATTY 1 cut(s) 641
XceI RCATGY 1 cut(s) 500
XcmI CCANNNNNNNNNTGG 1 cut(s) 758
XspI CTAG 2 cut(s) 384, 663
ZrmI AGTACT 2 cut(s) 320, 839
Zsp2I ATGCAT 1 cut(s) 685
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.