pycom10g14790

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Reverse (-)
18200034 .. 18202935
2902 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1842 bp
ATGAAGCGTAAAATTTCCGATTCCAACCACAAAGATCCGCTTCAAATCCACATTCCATCGCATCGTGGAGGTTTTCATGGGATTCGGAGCTCCGATTCCCGATTCCCCATCGCAACGCCCCCAAGAACAACAGATACCAGCTGCAAGAAAAGAGTCACATTTACAGATTCGCAGGACGATGAAAATCAGAGACCCCCAAGATGCGAATTTGCTGACAATGCCAAGACTTCCGAGTACGCCTTCTTCAAGAAATTGAAGGAAGGCGCAGGCCGTAAAGCGCAGTCTTGTTCTCTCCGTGAAGAGGTCGACCAAAGAAAGAATTCCAAGTCCAGTGACTGTTCCAGAGAGAGGATCAATGTGGTCCGGAATAAGAGAGAGGACACGAGGTCTTCATTTTTCAACGAAAATGCTACACCAGAACTAAATATCAAGAGAGCTTGTGCAACCTTGGAGAATGCACATAGGAGACAGAACAATATGGTGGAGGAATGTGACAATTCCTTGAGAAGTAAAGAAACTCAAAACAGGCGTGCGGACATTTTTGATAGGAAGAGACAGAAACTACACCAGTGGGTGGCAGAGACCTCATTTCCTGAAATTGATGAACACTGCTCAAAGGGGTACGATTTTGTTTCTGTGCTCCTCAGTCGGCTGATCCCCAAGTGCAATGAGACCAATGAATTTAAGGATCGTAAGCTTAGGCAACTGGACACCAATGACAAGTCTATGGCACTTCCATCTTATGAGTCAGATATTCAATTCAGGAAACTTCATTCAACACCTACTAGAAACTTTATGGAACTTGAATTTAGCCCTTGCTTGAATGATTCTGTATCATCTTGCTGGTCAAAGAGATCAAAAGAGAGGATTTTATGTTCCGATTCTCCAACCAGTTATGCTTACAAGAACCATCTTCAGTACAGAGTATGGGAACCTGACCAGGAATTATTAGGAGGTACTGCAATTTCATGCACTGAGAGTGATTCACTTTCTCTTCTTCCATTTGAAGAATATGGGTTGCTGACGTCTGGCCATGCCAAAGAGATAGATGTTTTCCGTCAGCCAAATGAATATTTGGTCGACAGAGAGCCATGTGTTCCTATGCTGGGTTGGGATTTTGACAGTACAGAAGAAGATAGAAGTTTATCTAACTTATCAACATATAGAACTGAACACCAATCAGCATCCTTTGCCAGTTATTACAACAATGAAATTTTAAGGCATTGTCTTGAAGGCCACGGCGATTTACAATCAGGTTTCCAGCAAATTCCGTTAACCTTGTCATCATGTATACCGAACTTTATTAATCTAGCTGAAGACTGCATGAATGACACTGCATACGAAGTTGGAAGCACCACATTATCTCTCCAAAACAACCATTGGTTTTCCAGCAAAATTATCAGTGAGGGGTATTATCTTCCTAATACCGAATCTTTCCTTTCCTCTGGACTTGATTCTGATTTAGGATGGAACTACCTTCCGTTAAGTGGTTCCTCGAGAGAGCATGATTCATCAACTTGTCTAGCTCTACAATTTCCTGAACAGGAAAACTTATCTTCCCGCCTTCTTACTTACCATGATGATAAGTACGAAACATGCTTAGATGACTCAAGTCATCCAAGAAGTCTTACTCATTTCATTGAAGATAATGTTAATGTCCATGAAGACAGCTCAGCCTTTTGCCTCCAAATTCCATTGGACAGAGAGAAGACATGGCCATTGCTGCTTGATAAGCCAAGCTGGGATGAAAGTAACGAAAGAGAGACAAACTTTGCTGATAGCGATGTCAATATTCTTGATAGTAAAGTAAGTTTTCGTCAATGGCTACATTACGATGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

614

Amino Acids

70.72

Weight (kDa)

5.4

Isoelectric Point (pI)

60.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1028
AccB7I CCANNNNNTGG 1 cut(s) 574
AccI GTMKAC 3 cut(s) 306, 1080, 1291
AccIII TCCGGA 1 cut(s) 363
AciI CCGC 3 cut(s) 38, 533, 1561
AclWI GGATC 4 cut(s) 29, 359, 649, 696
AcoI YGGCCR 2 cut(s) 1030, 1715
AcsI RAATTY 8 cut(s) 12, 206, 319, 680, 806, 1212, 1266, 1689
AcuI CTGAAG 2 cut(s) 899, 1335
AcyI GRCGYC 1 cut(s) 1025
AfaI GTAC 6 cut(s) 236, 623, 920, 958, 1126, 1589
AfiI CCNNNNNNNGG 5 cut(s) 301, 348, 574, 1106, 1487
AhdI GACNNNNNGTC 1 cut(s) 385
AjnI CCWGG 1 cut(s) 939
AloI GAACNNNNNNTCC 2 cut(s) 859, 891
AluBI AGCT 8 cut(s) 90, 141, 437, 697, 1313, 1526, 1671, 1740
AluI AGCT 8 cut(s) 90, 141, 437, 697, 1313, 1526, 1671, 1740
Alw21I GWGCWC 2 cut(s) 92, 642
Alw26I GTCTC 6 cut(s) 184, 460, 547, 575, 665, 1757
AlwI GGATC 4 cut(s) 29, 359, 649, 696
AlwNI CAGNNNCTG 1 cut(s) 336
Ama87I CYCGRG 1 cut(s) 1495
Aor13HI TCCGGA 1 cut(s) 363
AoxI GGCC 4 cut(s) 268, 1030, 1234, 1715
ApeKI GCWGC 2 cut(s) 141, 1723
ApoI RAATTY 8 cut(s) 12, 206, 319, 680, 806, 1212, 1266, 1689
AseI ATTAAT 1 cut(s) 1305
Asp700I GAANNNNTTC 1 cut(s) 319
AspLEI GCGC 2 cut(s) 266, 280
AspS9I GGNCC 1 cut(s) 361
AvaI CYCGRG 1 cut(s) 1495
AvaII GGWCC 1 cut(s) 361
BalI TGGCCA 2 cut(s) 1032, 1717
BanII GRGCYC 1 cut(s) 92
BarI GAAGNNNNNNTAC 2 cut(s) 227, 259
BauI CACGAG 1 cut(s) 382
BbsI GAAGAC 4 cut(s) 381, 1323, 1671, 1715
Bbv12I GWGCWC 2 cut(s) 92, 642
BbvI GCAGC 2 cut(s) 128, 1710
BccI CCATC 5 cut(s) 64, 116, 745, 918, 1461
BceAI ACGGC 2 cut(s) 255, 1255
BciT130I CCWGG 1 cut(s) 941
BcoDI GTCTC 6 cut(s) 184, 460, 547, 575, 665, 1757
BfaI CTAG 3 cut(s) 786, 1310, 1523
BisI GCNGC 2 cut(s) 142, 1724
BlpI GCTNAGC 1 cut(s) 1672
BlsI GCNGC 2 cut(s) 143, 1725
Bme1390I CCNGG 1 cut(s) 941
Bme18I GGWCC 1 cut(s) 361
BmeRI GACNNNNNGTC 1 cut(s) 385
BmeT110I CYCGRG 1 cut(s) 1495
BmgT120I GGNCC 1 cut(s) 361
BmiI GGNNCC 2 cut(s) 933, 1492
BmrFI CCNGG 1 cut(s) 941
BmsI GCATC 3 cut(s) 70, 191, 1193
BoxI GACNNNNGTC 1 cut(s) 1611
BpiI GAAGAC 4 cut(s) 381, 1323, 1671, 1715
Bpu10I CCTNAGC 1 cut(s) 698
Bpu1102I GCTNAGC 1 cut(s) 1672
BpuEI CTTGAG 2 cut(s) 523, 1594
BsaBI GATNNNNATC 1 cut(s) 183
BsaHI GRCGYC 1 cut(s) 1025
BsaI GGTCTC 3 cut(s) 184, 575, 665
BsaJI CCNNGG 2 cut(s) 447, 1237
BsaWI WCCGGW 1 cut(s) 363
Bsc4I CCNNNNNNNGG 5 cut(s) 301, 348, 574, 1106, 1487
Bse1I ACTGG 5 cut(s) 330, 568, 711, 891, 1194
Bse3DI GCAATG 2 cut(s) 673, 1718
Bse8I GATNNNNATC 1 cut(s) 183
BseAI TCCGGA 1 cut(s) 363
BseBI CCWGG 1 cut(s) 941
BseDI CCNNGG 2 cut(s) 447, 1237
BseGI GGATG 4 cut(s) 1184, 1472, 1615, 1750
BseJI GATNNNNATC 1 cut(s) 183
BseLI CCNNNNNNNGG 5 cut(s) 301, 348, 574, 1106, 1487
BseMI GCAATG 2 cut(s) 673, 1718
BseMII CTCAG 3 cut(s) 658, 966, 1686
BseNI ACTGG 5 cut(s) 330, 568, 711, 891, 1194
BseRI GAGGAG 1 cut(s) 632
BseXI GCAGC 2 cut(s) 128, 1710
BseYI CCCAGC 2 cut(s) 1105, 1740
BshFI GGCC 4 cut(s) 270, 1032, 1236, 1717
BsiHKAI GWGCWC 2 cut(s) 92, 642
BsiHKCI CYCGRG 1 cut(s) 1495
BsiSI CCGG 1 cut(s) 364
BslI CCNNNNNNNGG 5 cut(s) 301, 348, 574, 1106, 1487
BsmAI GTCTC 6 cut(s) 184, 460, 547, 575, 665, 1757
BsmI GAATGC 1 cut(s) 460
BsnI GGCC 4 cut(s) 270, 1032, 1236, 1717
Bso31I GGTCTC 3 cut(s) 184, 575, 665
BsoBI CYCGRG 1 cut(s) 1495
Bsp1286I GDGCHC 2 cut(s) 92, 642
Bsp13I TCCGGA 1 cut(s) 363
Bsp143I GATC 5 cut(s) 34, 351, 654, 688, 854
Bsp1720I GCTNAGC 1 cut(s) 1672
BspACI CCGC 3 cut(s) 38, 533, 1561
BspANI GGCC 4 cut(s) 270, 1032, 1236, 1717
BspCNI CTCAG 3 cut(s) 657, 967, 1685
BspEI TCCGGA 1 cut(s) 363
BspLI GGNNCC 2 cut(s) 933, 1492
BspPI GGATC 4 cut(s) 29, 359, 649, 696
BspTNI GGTCTC 3 cut(s) 184, 575, 665
BsrDI GCAATG 2 cut(s) 673, 1718
BsrI ACTGG 5 cut(s) 330, 568, 711, 891, 1194
BssECI CCNNGG 2 cut(s) 447, 1237
BssMI GATC 5 cut(s) 34, 351, 654, 688, 854
BssNAI GTATAC 1 cut(s) 1292
BssNI GRCGYC 1 cut(s) 1025
BssSI CACGAG 1 cut(s) 382
BssT1I CCWWGG 1 cut(s) 447
Bst1107I GTATAC 1 cut(s) 1292
Bst2BI CACGAG 1 cut(s) 382
Bst2UI CCWGG 1 cut(s) 941
Bst4CI ACNGT 2 cut(s) 338, 1124
Bst6I CTCTTC 3 cut(s) 294, 545, 999
BstACI GRCGYC 1 cut(s) 1025
BstAPI GCANNNNNTGC 1 cut(s) 1190
BstC8I GCNNGC 2 cut(s) 268, 531
BstDEI CTNAG 5 cut(s) 644, 698, 975, 1600, 1672
BstDSI CCRYGG 1 cut(s) 1237
BstF5I GGATG 4 cut(s) 1184, 1472, 1615, 1750
BstHHI GCGC 2 cut(s) 266, 280
BstKTI GATC 5 cut(s) 37, 354, 657, 691, 857
BstMAI GTCTC 6 cut(s) 184, 460, 547, 575, 665, 1757
BstMBI GATC 5 cut(s) 34, 351, 654, 688, 854
BstMWI GCNNNNNNNGC 4 cut(s) 218, 1190, 1723, 1732
BstNI CCWGG 1 cut(s) 941
BstNSI RCATGY 1 cut(s) 1599
BstPAI GACNNNNGTC 1 cut(s) 1611
BstSCI CCNGG 1 cut(s) 939
BstV1I GCAGC 2 cut(s) 128, 1710
BstV2I GAAGAC 4 cut(s) 381, 1323, 1671, 1715
BstX2I RGATCY 1 cut(s) 34
BstYI RGATCY 1 cut(s) 34
BstZ17I GTATAC 1 cut(s) 1292
BsuRI GGCC 4 cut(s) 270, 1032, 1236, 1717
BtgI CCRYGG 1 cut(s) 1237
BtgZI GCGATG 3 cut(s) 42, 94, 1797
BtsCI GGATG 4 cut(s) 1184, 1472, 1615, 1750
BtsI GCAGTG 2 cut(s) 607, 1332
BtsIMutI CAGTG 6 cut(s) 337, 575, 607, 972, 1332, 1408
Cac8I GCNNGC 2 cut(s) 268, 531
CaiI CAGNNNCTG 1 cut(s) 336
CfoI GCGC 2 cut(s) 266, 280
Cfr13I GGNCC 1 cut(s) 361
Csp6I GTAC 6 cut(s) 235, 622, 919, 957, 1125, 1588
CviQI GTAC 6 cut(s) 235, 622, 919, 957, 1125, 1588
DdeI CTNAG 5 cut(s) 644, 698, 975, 1600, 1672
DpnI GATC 5 cut(s) 36, 353, 656, 690, 856
DpnII GATC 5 cut(s) 34, 351, 654, 688, 854
DriI GACNNNNNGTC 1 cut(s) 385
EaeI YGGCCR 2 cut(s) 1030, 1715
Eam1104I CTCTTC 3 cut(s) 294, 545, 999
Eam1105I GACNNNNNGTC 1 cut(s) 385
EarI CTCTTC 3 cut(s) 294, 545, 999
Ecl136II GAGCTC 1 cut(s) 90
Eco130I CCWWGG 1 cut(s) 447
Eco24I GRGCYC 1 cut(s) 92
Eco31I GGTCTC 3 cut(s) 184, 575, 665
Eco47I GGWCC 1 cut(s) 361
Eco53kI GAGCTC 1 cut(s) 90
Eco57I CTGAAG 2 cut(s) 899, 1335
Eco88I CYCGRG 1 cut(s) 1495
EcoICRI GAGCTC 1 cut(s) 90
EcoRI GAATTC 1 cut(s) 319
EcoRII CCWGG 1 cut(s) 939
EcoT14I CCWWGG 1 cut(s) 447
EcoT38I GRGCYC 1 cut(s) 92
ErhI CCWWGG 1 cut(s) 447
FalI AAGNNNNNCTT 2 cut(s) 24, 56
FauI CCCGC 1 cut(s) 1568
FblI GTMKAC 3 cut(s) 306, 1080, 1291
Fnu4HI GCNGC 2 cut(s) 142, 1724
FokI GGATG 4 cut(s) 1171, 1479, 1602, 1757
FriOI GRGCYC 1 cut(s) 92
Fsp4HI GCNGC 2 cut(s) 142, 1724
FspBI CTAG 3 cut(s) 786, 1310, 1523
GlaI GCGC 2 cut(s) 265, 279
GluI GCNGC 2 cut(s) 142, 1724
GsaI CCCAGC 2 cut(s) 1109, 1744
HaeIII GGCC 4 cut(s) 270, 1032, 1236, 1717
HapII CCGG 1 cut(s) 364
HhaI GCGC 2 cut(s) 266, 280
Hin1I GRCGYC 1 cut(s) 1025
Hin6I GCGC 2 cut(s) 264, 278
HinP1I GCGC 2 cut(s) 264, 278
HincII GTYRAC 3 cut(s) 307, 1081, 1275
HindII GTYRAC 3 cut(s) 307, 1081, 1275
HindIII AAGCTT 1 cut(s) 695
HpaI GTTAAC 1 cut(s) 1275
HpaII CCGG 1 cut(s) 364
Hpy166II GTNNAC 4 cut(s) 307, 1081, 1275, 1292
Hpy188I TCNGA 8 cut(s) 19, 87, 94, 189, 232, 751, 880, 1459
Hpy8I GTNNAC 4 cut(s) 307, 1081, 1275, 1292
HpyAV CCTTC 6 cut(s) 250, 250, 254, 1226, 1487, 1574
HpyCH4III ACNGT 2 cut(s) 338, 1124
HpyCH4IV ACGT 1 cut(s) 1025
HpyCH4V TGCA 8 cut(s) 144, 443, 458, 666, 962, 972, 1323, 1337
HpyF10VI GCNNNNNNNGC 4 cut(s) 218, 1190, 1723, 1732
HpyF3I CTNAG 5 cut(s) 644, 698, 975, 1600, 1672
HpySE526I ACGT 1 cut(s) 1025
Hsp92I GRCGYC 1 cut(s) 1025
HspAI GCGC 2 cut(s) 264, 278
Kpn2I TCCGGA 1 cut(s) 363
KspAI GTTAAC 1 cut(s) 1275
Kzo9I GATC 5 cut(s) 34, 351, 654, 688, 854
LmnI GCTCC 3 cut(s) 87, 95, 645
Lsp1109I GCAGC 2 cut(s) 128, 1710
LweI GCATC 3 cut(s) 70, 191, 1193
MaeI CTAG 3 cut(s) 786, 1310, 1523
MaeII ACGT 1 cut(s) 1025
MaeIII GTNAC 4 cut(s) 154, 332, 491, 1751
MalI GATC 5 cut(s) 36, 353, 656, 690, 856
MboI GATC 5 cut(s) 34, 351, 654, 688, 854
MflI RGATCY 1 cut(s) 34
MhlI GDGCHC 2 cut(s) 92, 642
MlsI TGGCCA 2 cut(s) 1032, 1717
MluNI TGGCCA 2 cut(s) 1032, 1717
MlyI GAGTC 3 cut(s) 162, 755, 1601
MmeI TCCRAC 3 cut(s) 48, 911, 1327
Mox20I TGGCCA 2 cut(s) 1032, 1717
MroI TCCGGA 1 cut(s) 363
MroXI GAANNNNTTC 1 cut(s) 319
MscI TGGCCA 2 cut(s) 1032, 1717
MseI TTAA 6 cut(s) 684, 1217, 1274, 1305, 1484, 1653
MslI CAYNNNNRTG 1 cut(s) 1833
Msp20I TGGCCA 2 cut(s) 1032, 1717
MspA1I CMGCKG 1 cut(s) 141
MspI CCGG 1 cut(s) 364
MspR9I CCNGG 1 cut(s) 941
Mva1269I GAATGC 1 cut(s) 460
MvaI CCWGG 1 cut(s) 941
MwoI GCNNNNNNNGC 4 cut(s) 218, 1190, 1723, 1732
NdeII GATC 5 cut(s) 34, 351, 654, 688, 854
NlaIV GGNNCC 2 cut(s) 933, 1492
NmuCI GTSAC 3 cut(s) 154, 332, 491
NspI RCATGY 1 cut(s) 1599
PaeR7I CTCGAG 1 cut(s) 1495
PctI GAATGC 1 cut(s) 460
PdmI GAANNNNTTC 1 cut(s) 319
PflMI CCANNNNNTGG 1 cut(s) 574
PkrI GCNGC 2 cut(s) 143, 1725
PleI GAGTC 3 cut(s) 161, 754, 1601
PpsI GAGTC 3 cut(s) 161, 754, 1601
PshAI GACNNNNGTC 1 cut(s) 1611
PshBI ATTAAT 1 cut(s) 1305
Psp124BI GAGCTC 1 cut(s) 92
Psp6I CCWGG 1 cut(s) 939
PspFI CCCAGC 2 cut(s) 1105, 1740
PspGI CCWGG 1 cut(s) 939
PspN4I GGNNCC 2 cut(s) 933, 1492
PspPI GGNCC 1 cut(s) 361
PsrI GAACNNNNNNTAC 2 cut(s) 118, 150
PstNI CAGNNNCTG 1 cut(s) 336
PsuI RGATCY 1 cut(s) 34
PvuII CAGCTG 1 cut(s) 141
RsaI GTAC 6 cut(s) 236, 623, 920, 958, 1126, 1589
RsaNI GTAC 6 cut(s) 235, 622, 919, 957, 1125, 1588
RseI CAYNNNNRTG 1 cut(s) 1833
SacI GAGCTC 1 cut(s) 92
SalI GTCGAC 2 cut(s) 305, 1079
SaqAI TTAA 6 cut(s) 684, 1217, 1274, 1305, 1484, 1653
SatI GCNGC 2 cut(s) 142, 1724
Sau3AI GATC 5 cut(s) 34, 351, 654, 688, 854
Sau96I GGNCC 1 cut(s) 361
SchI GAGTC 3 cut(s) 162, 755, 1601
ScrFI CCNGG 1 cut(s) 941
SduI GDGCHC 2 cut(s) 92, 642
SfaNI GCATC 3 cut(s) 70, 191, 1193
Sfr274I CTCGAG 1 cut(s) 1495
SinI GGWCC 1 cut(s) 361
SlaI CTCGAG 1 cut(s) 1495
SmiMI CAYNNNNRTG 1 cut(s) 1833
SmlI CTYRAG 3 cut(s) 502, 1495, 1609
SmoI CTYRAG 3 cut(s) 502, 1495, 1609
SsiI CCGC 3 cut(s) 38, 533, 1561
SspI AATATT 2 cut(s) 1073, 1792
SspMI CTAG 3 cut(s) 786, 1310, 1523
SstI GAGCTC 1 cut(s) 92
StyD4I CCNGG 1 cut(s) 939
StyI CCWWGG 1 cut(s) 447
TaaI ACNGT 2 cut(s) 338, 1124
TaiI ACGT 1 cut(s) 1028
TaqI TCGA 3 cut(s) 306, 1080, 1496
TatI WGTACW 2 cut(s) 918, 1124
Tru1I TTAA 6 cut(s) 684, 1217, 1274, 1305, 1484, 1653
Tru9I TTAA 6 cut(s) 684, 1217, 1274, 1305, 1484, 1653
TscAI CASTG 6 cut(s) 337, 575, 614, 979, 1339, 1408
TseFI GTSAC 3 cut(s) 154, 332, 491
TseI GCWGC 2 cut(s) 141, 1723
Tsp45I GTSAC 3 cut(s) 154, 332, 491
TspGWI ACGGA 4 cut(s) 284, 1046, 1260, 1470
TspRI CASTG 6 cut(s) 337, 575, 614, 979, 1339, 1408
Van91I CCANNNNNTGG 1 cut(s) 574
VpaK11BI GGWCC 1 cut(s) 361
VspI ATTAAT 1 cut(s) 1305
XapI RAATTY 8 cut(s) 12, 206, 319, 680, 806, 1212, 1266, 1689
XceI RCATGY 1 cut(s) 1599
XhoI CTCGAG 1 cut(s) 1495
XmiI GTMKAC 3 cut(s) 306, 1080, 1291
XmnI GAANNNNTTC 1 cut(s) 319
XspI CTAG 3 cut(s) 786, 1310, 1523
ZraI GACGTC 1 cut(s) 1026
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.