Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0007152

Physical Location & Seq

Genomic Coordinates Reverse (-)

19423507 .. 19428600

Gene Structure 5094 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2169 bp

ATGATCGTTAAAAAGCATGTGACAAATGCAGAGATGCGTGAAATGCTTGAAGCCAACGATCAAGATTCAACAGGATCAGAGCTTGATTTGCGCGAGCGTTGTGCTGATGGAATGATGTTTGGAGCACTTAAGAGCTGCCCACTCTGTTCTGGTTCTCTTCGATATTCTGAAGGCATGTACCGGTGCCATGGCTACCTATCGGCCTGGAGTAAGTGTTCTTACTCTACTCAGGAACCTGAACGTCTTGAAGGGAAGTGGAAAATCCCAGAAGATACGGAGAATCAATATCTTAAGAAGTGGTTTAAATCACAAAAGCTTGCAAAACCTGTGCGGATACTGCCTCCATTGACACCTAGCAAGCCTTCTGGGAGTCCAGGCCAATCTCATTCATCTAACAGTACAAGCTTGGCGGATTTAAAAGTTGCTTTTCGCGGATTACCTAAAGAATCAATGGAAGAATGGAGTAGAAAAATTGACGGTGCAGCTGGAGCGGTTCATTCGAAGATCAAGAAAGATACTAATTGCTTAGTTGTGAGTGGAGCATTTGATGATGATGCTGAGATGAGAAAAGCCAGGAGGATGAAATTACCAATTGTTAGGGAAGATTATCTGGTTGATTGCTTTAAAAGACAGAAGAAGCTTCCATTTGATATGTACAAAGTCGAAGCTGTCGGTGAATCGTCTAGCATGGTCACTGTCAAAGTGAAAGGCCGAAGTGCTGTTCATGAATCTTCTGGTCTGCAAGATACTGGGCATATACTTGAGGATGGGAAAAGCATCTACAATACAACTTTAAGTATGTCTGATCTGTCAACTGGTGTTAACAGTTACTACATTCTCCAAATTATACAAGATGATAAGAGTTCTGACTGTTATGTGTTCCGTAAATGGGGACGAGTGGGGAATGATAAAATTGGAGGAAACAAACTGGAAGATATGTCGAAATCAGATGCAATCTGTGAATTTAAACGTTTGTTCCTTGAGAAGACTGGGAATTCGTGGGAAGCATGGGAGCAAAAACAAAATTTTCAGAAGCAAGCTGGAAAATTCTTTCCATTGGATATTGATTATGGGGTCAATAAACAGGTTTCCAAAAAAAATCAGAAAAATGGGGACAGCAAATTGGCTCCTCAGTTAGCAGAATTGATGAAGATGCTTTTCAATGTTGAAACATACAGAGCTGCCATGATGGAATTTGAGATAAATATGTCAGAAATGCCGCTTGGAAAACTGAGTAAAGCCAACATCCAAAAGGGATTTGAGGCATTAACGGAAATACAGAATCTGTTGAATAATAATGGCCATGCTCCTTCCATAAAAGAAAGCTTGATTATAGATGCAAGCAACCGTTTTTTCACTGTGATCCCTTCCATACACCCACGGGTTATCAGGGATGAGGATGACTTTAAGTCAAAGGTGAAAATGTTAGAAGCTCTCCAGGACATTGAAATTGCTTCCAGATTAGTTGGTTTGGATGCTGATAGTGATGACTCCCTTGATGAGAAGTATAAGAAGCTCCGGTGTGATATCGATCCAATTCCTCATGATAGTGAAGATTATCGGTTGATTGAAAATTACCTTCTTACTACTCATGCTCCTACACATACGGATTGGAGTCTTGAACTTGAAGAAGTTTTTGCACTTGAAAGGGAAGGAGAATTTGATAAATTTGCTCCCTATCGGAAAAGGCTTAAGAACAGAATGCTTCTTTGGCATGGTTCTCGGTTTACAAATTTCGTGGGTATACTTAGCCAAGGACTAAGAATAGCTCCTCCTGAAGCTCCAGCTACTGGTTACATGTTCGGCAAGGGGATTTACTTTGCTGACCTTGTCAGCAAGAGTGCACAGTATTGCTATACAGATAAGAAAAATCCTGTGGGCCTCATGCTTCTAAGTGAAGTTGCATTGGGGGAGGTGTATGAGCTCAAGAAGGCTGCGTATATGGACAAACCTCCTAAAGGAAAGCACTCTACAAAGGGGCTGGGCAAGAAAATACCTCAGGAGTCGGAGTATGTAAAATGGAAGGACGATGTCATCGTGCCTTGTGGCAAACCAGTGCCATCAAATGTCAAGGCCTCTGAGCTCATGTATAACGAGTACATCGTTTATGATACAGCTCAAGTTAAAATGCAATACCTGTTGAAGGTGAGGTTTCATCACAAGAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0003909 GO:0003910 GO:0003950 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006266 GO:0006271 GO:0006273 GO:0006281 GO:0006464 GO:0006471 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006979 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0016070 GO:0016740 GO:0016757 GO:0016763 GO:0016874 GO:0016886 GO:0019538 GO:0022616 GO:0033554 GO:0033993 GO:0034641 GO:0034645 GO:0036211 GO:0042221 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0046483 GO:0050896 GO:0051103 GO:0051716 GO:0071704 GO:0090304 GO:0097305 GO:0140097 GO:1901360 GO:1901564 GO:1901576 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko03410 ko04210 ko04212 ko04214 ko04217 map03410 map04210 map04212 map04214 map04217

Pfam Domains

Protein Families

BRCT PADR1 PARP PARP_reg WGR zf-PARP

Protein Analysis

723

Amino Acids

82.06

Weight (kDa)

8.5

Isoelectric Point (pI)

36.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PADR1_N	PF21728	4 - 41	1.6e-13	PADR1, N-terminal helical domain
Zn_ribbon_PADR1	PF08063	42 - 81	2.3e-16	PADR1 domain, zinc ribbon fold
BRCT	PF00533	134 - 208	3.2e-08	BRCA1 C Terminus (BRCT) domain
WGR	PF05406	261 - 339	4.5e-17	WGR domain
PARP_reg	PF02877	373 - 503	1.7e-37	Poly(ADP-ribose) polymerase, regulatory domain
PARP	PF00644	517 - 718	1.5e-82	Poly(ADP-ribose) polymerase catalytic domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007152)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G31320
fragaria_vesca	FvH4_2g21980 FvH4_2g21980 FvH4_2g21980
malus_domestica	MD05G1201000.v1.1 MD10G1187800.v1.1
prunus_persica	Prupe.8G227600_v2.0.a1 Prupe.8G227600_v2.0.a1
pyrus_communis	pycom05g18780 pycom10g16230
rosa_chinensis	RchiOBHm_Chr6g0288861
rosa_laevigata	RLG00000012360
rosa_multiflora	Rmu_sc0005314.1_g000009
rosa_roxburghii	Rroxscaffold_7G00179830
rosa_rugosa	Rorug06G0198600 Rorug06G0198600 Rorug06G0198600 Rorug06G0198700 Rorug06G0198800 Rorug06G0198900 Rorug06G0198900
rosa_samantha	Rh6AG310000 Rh6BG315900 Rh6CG323400
rosa_wichuraiana	Rw6G026810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	183
AccB7I	CCANNNNNTGG	1 cut(s)	1790
AccBSI	CCGCTC	1 cut(s)	491
AccI	GTMKAC	1 cut(s)	1744
AccII	CGCG	2 cut(s)	93, 432
AciI	CCGC	5 cut(s)	331, 410, 432, 491, 1220
AclI	AACGTT	1 cut(s)	970
AclWI	GGATC	3 cut(s)	82, 1357, 1526
AcoI	YGGCCR	1 cut(s)	1300
AcsI	RAATTY	8 cut(s)	962, 994, 1024, 1046, 1193, 1658, 1667, 1732
AcuI	CTGAAG	2 cut(s)	189, 1797
AfaI	GTAC	4 cut(s)	179, 400, 656, 2099
AfiI	CCNNNNNNNGG	4 cut(s)	889, 1790, 1958, 2143
AflII	CTTAAG	3 cut(s)	128, 290, 1691
AflIII	ACRYGT	1 cut(s)	1797
AgeI	ACCGGT	1 cut(s)	180
AhdI	GACNNNNNGTC	1 cut(s)	1408
AjnI	CCWGG	4 cut(s)	203, 373, 572, 1437
AjuI	GAANNNNNNNTTGG	4 cut(s)	1206, 1238, 1693, 1725
AloI	GAACNNNNNNTCC	2 cut(s)	199, 231
Alw21I	GWGCWC	4 cut(s)	127, 1846, 1926, 2085
Alw44I	GTGCAC	1 cut(s)	1842
AlwI	GGATC	3 cut(s)	82, 1357, 1526
AlwNI	CAGNNNCTG	2 cut(s)	1285, 1790
AoxI	GGCC	6 cut(s)	201, 376, 709, 1300, 1879, 2073
ApaLI	GTGCAC	1 cut(s)	1842
ApeKI	GCWGC	4 cut(s)	135, 482, 1181, 1934
ApoI	RAATTY	8 cut(s)	962, 994, 1024, 1046, 1193, 1658, 1667, 1732
ArsI	GACNNNNNNTTYG	2 cut(s)	979, 1011
AsiGI	ACCGGT	1 cut(s)	180
AspLEI	GCGC	1 cut(s)	93
AspS9I	GGNCC	1 cut(s)	1879
AsuHPI	GGTGA	3 cut(s)	686, 1429, 2158
AsuII	TTCGAA	1 cut(s)	500
AxyI	CCTNAGG	1 cut(s)	1998
BaeGI	GKGCMC	1 cut(s)	1846
BalI	TGGCCA	1 cut(s)	1302
BanI	GGYRCC	1 cut(s)	183
BanII	GRGCYC	2 cut(s)	1926, 2085
BbsI	GAAGAC	1 cut(s)	992
Bbv12I	GWGCWC	4 cut(s)	127, 1846, 1926, 2085
BbvI	GCAGC	4 cut(s)	122, 494, 1168, 1921
BccI	CCATC	4 cut(s)	101, 761, 1183, 2068
BcgI	CGANNNNNNTGC	4 cut(s)	83, 117, 1703, 1737
BciT130I	CCWGG	4 cut(s)	205, 375, 574, 1439
BciVI	GTATCC	1 cut(s)	327
BfaI	CTAG	2 cut(s)	354, 684
BfrI	CTTAAG	3 cut(s)	128, 290, 1691
BfuI	GTATCC	1 cut(s)	327
BisI	GCNGC	5 cut(s)	136, 483, 1182, 1220, 1935
BlsI	GCNGC	5 cut(s)	137, 484, 1183, 1221, 1936
Bme1390I	CCNGG	4 cut(s)	205, 375, 574, 1439
BmeRI	GACNNNNNGTC	1 cut(s)	1408
BmgT120I	GGNCC	1 cut(s)	1879
BmiI	GGNNCC	3 cut(s)	185, 234, 1128
BmrFI	CCNGG	4 cut(s)	205, 375, 574, 1439
BmrI	ACTGGG	2 cut(s)	759, 999
BmsI	GCATC	7 cut(s)	24, 544, 786, 940, 1143, 1327, 1465
BmuI	ACTGGG	2 cut(s)	759, 999
BpiI	GAAGAC	1 cut(s)	992
BpmI	CTGGAG	4 cut(s)	226, 507, 1421, 1767
Bpu14I	TTCGAA	1 cut(s)	500
BpuEI	CTTGAG	4 cut(s)	782, 1001, 1910, 2103
Bsa29I	ATCGAT	1 cut(s)	1530
BsaBI	GATNNNNATC	1 cut(s)	1530
BsaJI	CCNNGG	3 cut(s)	187, 1379, 1753
BsaWI	WCCGGW	2 cut(s)	180, 1518
BsaXI	ACNNNNNCTCC	6 cut(s)	199, 229, 1579, 1609, 1994, 2024
Bsc4I	CCNNNNNNNGG	4 cut(s)	889, 1790, 1958, 2143
Bse118I	RCCGGY	1 cut(s)	180
Bse1I	ACTGG	6 cut(s)	754, 820, 933, 994, 1795, 2054
Bse21I	CCTNAGG	1 cut(s)	1998
Bse8I	GATNNNNATC	1 cut(s)	1530
BseBI	CCWGG	4 cut(s)	205, 375, 574, 1439
BseCI	ATCGAT	1 cut(s)	1530
BseDI	CCNNGG	3 cut(s)	187, 1379, 1753
BseGI	GGATG	6 cut(s)	585, 772, 1245, 1399, 1405, 1480
BseJI	GATNNNNATC	1 cut(s)	1530
BseLI	CCNNNNNNNGG	4 cut(s)	889, 1790, 1958, 2143
BseMII	CTCAG	6 cut(s)	242, 549, 1145, 1223, 2012, 2070
BseNI	ACTGG	6 cut(s)	754, 820, 933, 994, 1795, 2054
BseRI	GAGGAG	2 cut(s)	1119, 1761
BseSI	GKGCMC	1 cut(s)	1846
BseXI	GCAGC	4 cut(s)	122, 494, 1168, 1921
BseYI	CCCAGC	1 cut(s)	1981
BsgI	GTGCAG	1 cut(s)	501
Bsh1236I	CGCG	2 cut(s)	93, 432
BshFI	GGCC	6 cut(s)	203, 378, 711, 1302, 1881, 2075
BshNI	GGYRCC	1 cut(s)	183
BshTI	ACCGGT	1 cut(s)	180
BshVI	ATCGAT	1 cut(s)	1530
BsiHKAI	GWGCWC	4 cut(s)	127, 1846, 1926, 2085
BsiSI	CCGG	2 cut(s)	181, 1519
BslFI	GGGAC	2 cut(s)	906, 1127
BslI	CCNNNNNNNGG	4 cut(s)	889, 1790, 1958, 2143
BsmFI	GGGAC	2 cut(s)	906, 1127
BsmI	GAATGC	1 cut(s)	1707
BsnI	GGCC	6 cut(s)	203, 378, 711, 1302, 1881, 2075
Bsp119I	TTCGAA	1 cut(s)	500
Bsp1286I	GDGCHC	4 cut(s)	127, 1846, 1926, 2085
Bsp1407I	TGTACA	1 cut(s)	654
Bsp143I	GATC	7 cut(s)	3, 58, 74, 504, 805, 1362, 1531
Bsp19I	CCATGG	1 cut(s)	187
BspACI	CCGC	5 cut(s)	331, 410, 432, 491, 1220
BspANI	GGCC	6 cut(s)	203, 378, 711, 1302, 1881, 2075
BspCNI	CTCAG	6 cut(s)	241, 550, 1144, 1224, 2011, 2071
BspDI	ATCGAT	1 cut(s)	1530
BspFNI	CGCG	2 cut(s)	93, 432
BspHI	TCATGA	2 cut(s)	724, 1543
BspLI	GGNNCC	3 cut(s)	185, 234, 1128
BspPI	GGATC	3 cut(s)	82, 1357, 1526
BspT104I	TTCGAA	1 cut(s)	500
BspT107I	GGYRCC	1 cut(s)	183
BspTI	CTTAAG	3 cut(s)	128, 290, 1691
BsrBI	CCGCTC	1 cut(s)	491
BsrFI	RCCGGY	1 cut(s)	180
BsrGI	TGTACA	1 cut(s)	654
BsrI	ACTGG	6 cut(s)	754, 820, 933, 994, 1795, 2054
BssAI	RCCGGY	1 cut(s)	180
BssECI	CCNNGG	3 cut(s)	187, 1379, 1753
BssMI	GATC	7 cut(s)	3, 58, 74, 504, 805, 1362, 1531
BssNAI	GTATAC	1 cut(s)	1745
BssT1I	CCWWGG	2 cut(s)	187, 1753
Bst1107I	GTATAC	1 cut(s)	1745
Bst2UI	CCWGG	4 cut(s)	205, 375, 574, 1439
Bst4CI	ACNGT	8 cut(s)	398, 479, 697, 827, 872, 1349, 1360, 1848
Bst6I	CTCTTC	1 cut(s)	162
BstAFI	CTTAAG	3 cut(s)	128, 290, 1691
BstAUI	TGTACA	1 cut(s)	654
BstBI	TTCGAA	1 cut(s)	500
BstC8I	GCNNGC	5 cut(s)	95, 318, 359, 1038, 1342
BstDSI	CCRYGG	2 cut(s)	187, 1379
BstENI	CCTNNNNNAGG	2 cut(s)	1956, 2141
BstF5I	GGATG	6 cut(s)	585, 772, 1245, 1399, 1405, 1480
BstFNI	CGCG	2 cut(s)	93, 432
BstHHI	GCGC	1 cut(s)	93
BstKTI	GATC	7 cut(s)	6, 61, 77, 507, 808, 1365, 1534
BstMBI	GATC	7 cut(s)	3, 58, 74, 504, 805, 1362, 1531
BstMWI	GCNNNNNNNGC	5 cut(s)	43, 88, 337, 488, 1711
BstNI	CCWGG	4 cut(s)	205, 375, 574, 1439
BstNSI	RCATGY	3 cut(s)	20, 178, 1801
BstSCI	CCNGG	4 cut(s)	203, 373, 572, 1437
BstSLI	GKGCMC	1 cut(s)	1846
BstUI	CGCG	2 cut(s)	93, 432
BstV1I	GCAGC	4 cut(s)	122, 494, 1168, 1921
BstV2I	GAAGAC	1 cut(s)	992
BstZ17I	GTATAC	1 cut(s)	1745
Bsu15I	ATCGAT	1 cut(s)	1530
Bsu36I	CCTNAGG	1 cut(s)	1998
BsuI	GTATCC	1 cut(s)	327
BsuRI	GGCC	6 cut(s)	203, 378, 711, 1302, 1881, 2075
BsuTUI	ATCGAT	1 cut(s)	1530
BtgI	CCRYGG	2 cut(s)	187, 1379
BtsCI	GGATG	6 cut(s)	585, 772, 1245, 1399, 1405, 1480
BtsIMutI	CAGTG	3 cut(s)	693, 1356, 2061
Cac8I	GCNNGC	5 cut(s)	95, 318, 359, 1038, 1342
CaiI	CAGNNNCTG	2 cut(s)	1285, 1790
CciI	TCATGA	2 cut(s)	724, 1543
CfoI	GCGC	1 cut(s)	93
Cfr10I	RCCGGY	1 cut(s)	180
Cfr13I	GGNCC	1 cut(s)	1879
ClaI	ATCGAT	1 cut(s)	1530
Csp6I	GTAC	4 cut(s)	178, 399, 655, 2098
CspAI	ACCGGT	1 cut(s)	180
CspCI	CAANNNNNGTGG	2 cut(s)	1719, 1754
CviQI	GTAC	4 cut(s)	178, 399, 655, 2098
DpnI	GATC	7 cut(s)	5, 60, 76, 506, 807, 1364, 1533
DpnII	GATC	7 cut(s)	3, 58, 74, 504, 805, 1362, 1531
DraI	TTTAAA	4 cut(s)	304, 417, 625, 967
DriI	GACNNNNNGTC	1 cut(s)	1408
EaeI	YGGCCR	1 cut(s)	1300
Eam1104I	CTCTTC	1 cut(s)	162
Eam1105I	GACNNNNNGTC	1 cut(s)	1408
EarI	CTCTTC	1 cut(s)	162
EciI	GGCGGA	1 cut(s)	425
Ecl136II	GAGCTC	2 cut(s)	1924, 2083
Eco130I	CCWWGG	2 cut(s)	187, 1753
Eco147I	AGGCCT	1 cut(s)	2075
Eco24I	GRGCYC	2 cut(s)	1926, 2085
Eco32I	GATATC	1 cut(s)	1528
Eco53kI	GAGCTC	2 cut(s)	1924, 2083
Eco57I	CTGAAG	2 cut(s)	189, 1797
Eco81I	CCTNAGG	1 cut(s)	1998
EcoICRI	GAGCTC	2 cut(s)	1924, 2083
EcoNI	CCTNNNNNAGG	2 cut(s)	1956, 2141
EcoRI	GAATTC	1 cut(s)	994
EcoRII	CCWGG	4 cut(s)	203, 373, 572, 1437
EcoRV	GATATC	1 cut(s)	1528
EcoT14I	CCWWGG	2 cut(s)	187, 1753
EcoT38I	GRGCYC	2 cut(s)	1926, 2085
ErhI	CCWWGG	2 cut(s)	187, 1753
FaqI	GGGAC	2 cut(s)	906, 1127
FblI	GTMKAC	1 cut(s)	1744
Fnu4HI	GCNGC	5 cut(s)	136, 483, 1182, 1220, 1935
FokI	GGATG	6 cut(s)	592, 779, 1232, 1406, 1412, 1487
FriOI	GRGCYC	2 cut(s)	1926, 2085
Fsp4HI	GCNGC	5 cut(s)	136, 483, 1182, 1220, 1935
FspBI	CTAG	2 cut(s)	354, 684
GlaI	GCGC	1 cut(s)	92
GluI	GCNGC	5 cut(s)	136, 483, 1182, 1220, 1935
GsaI	CCCAGC	1 cut(s)	1985
GsuI	CTGGAG	4 cut(s)	226, 507, 1421, 1767
HaeIII	GGCC	6 cut(s)	203, 378, 711, 1302, 1881, 2075
HapII	CCGG	2 cut(s)	181, 1519
HhaI	GCGC	1 cut(s)	93
Hin6I	GCGC	1 cut(s)	91
HinP1I	GCGC	1 cut(s)	91
HincII	GTYRAC	2 cut(s)	813, 823
HindII	GTYRAC	2 cut(s)	813, 823
HindIII	AAGCTT	4 cut(s)	314, 403, 638, 1324
HpaI	GTTAAC	1 cut(s)	823
HpaII	CCGG	2 cut(s)	181, 1519
HphI	GGTGA	3 cut(s)	686, 1429, 2158
Hpy166II	GTNNAC	5 cut(s)	813, 823, 1728, 1745, 1844
Hpy8I	GTNNAC	5 cut(s)	813, 823, 1728, 1745, 1844
HpyCH4III	ACNGT	8 cut(s)	398, 479, 697, 827, 872, 1349, 1360, 1848
HpyCH4IV	ACGT	2 cut(s)	241, 970
HpyF10VI	GCNNNNNNNGC	5 cut(s)	43, 88, 337, 488, 1711
HpySE526I	ACGT	2 cut(s)	241, 970
HspAI	GCGC	1 cut(s)	91
KspAI	GTTAAC	1 cut(s)	823
Kzo9I	GATC	7 cut(s)	3, 58, 74, 504, 805, 1362, 1531
Lsp1109I	GCAGC	4 cut(s)	122, 494, 1168, 1921
LweI	GCATC	7 cut(s)	24, 544, 786, 940, 1143, 1327, 1465
MaeI	CTAG	2 cut(s)	354, 684
MaeII	ACGT	2 cut(s)	241, 970
MaeIII	GTNAC	4 cut(s)	19, 691, 827, 1793
MalI	GATC	7 cut(s)	5, 60, 76, 506, 807, 1364, 1533
MbiI	CCGCTC	1 cut(s)	491
MboI	GATC	7 cut(s)	3, 58, 74, 504, 805, 1362, 1531
MfeI	CAATTG	1 cut(s)	591
MhlI	GDGCHC	4 cut(s)	127, 1846, 1926, 2085
MlsI	TGGCCA	1 cut(s)	1302
MluNI	TGGCCA	1 cut(s)	1302
MlyI	GAGTC	4 cut(s)	379, 1484, 1624, 2012
MmeI	TCCRAC	1 cut(s)	1986
Mox20I	TGGCCA	1 cut(s)	1302
MscI	TGGCCA	1 cut(s)	1302
MslI	CAYNNNNRTG	1 cut(s)	1548
Msp20I	TGGCCA	1 cut(s)	1302
MspA1I	CMGCKG	1 cut(s)	485
MspCI	CTTAAG	3 cut(s)	128, 290, 1691
MspI	CCGG	2 cut(s)	181, 1519
MspR9I	CCNGG	4 cut(s)	205, 375, 574, 1439
MunI	CAATTG	1 cut(s)	591
Mva1269I	GAATGC	1 cut(s)	1707
MvaI	CCWGG	4 cut(s)	205, 375, 574, 1439
MvnI	CGCG	2 cut(s)	93, 432
MwoI	GCNNNNNNNGC	5 cut(s)	43, 88, 337, 488, 1711
NcoI	CCATGG	1 cut(s)	187
NdeII	GATC	7 cut(s)	3, 58, 74, 504, 805, 1362, 1531
NlaIV	GGNNCC	3 cut(s)	185, 234, 1128
NmuCI	GTSAC	2 cut(s)	19, 691
NspI	RCATGY	3 cut(s)	20, 178, 1801
NspV	TTCGAA	1 cut(s)	500
PagI	TCATGA	2 cut(s)	724, 1543
PceI	AGGCCT	1 cut(s)	2075
PciI	ACATGT	1 cut(s)	1797
PcsI	WCGNNNNNNNCGW	2 cut(s)	2034, 2100
PctI	GAATGC	1 cut(s)	1707
PfeI	GAWTC	6 cut(s)	65, 280, 446, 677, 728, 1282
PflFI	GACNNNGTC	2 cut(s)	1829, 2030
PflMI	CCANNNNNTGG	1 cut(s)	1790
PfoI	TCCNGGA	1 cut(s)	1437
PinAI	ACCGGT	1 cut(s)	180
PkrI	GCNGC	5 cut(s)	137, 484, 1183, 1221, 1936
PleI	GAGTC	4 cut(s)	378, 1484, 1623, 2011
PpsI	GAGTC	4 cut(s)	378, 1484, 1623, 2011
PscI	ACATGT	1 cut(s)	1797
Psp124BI	GAGCTC	2 cut(s)	1926, 2085
Psp1406I	AACGTT	1 cut(s)	970
Psp6I	CCWGG	4 cut(s)	203, 373, 572, 1437
PspFI	CCCAGC	1 cut(s)	1981
PspGI	CCWGG	4 cut(s)	203, 373, 572, 1437
PspN4I	GGNNCC	3 cut(s)	185, 234, 1128
PspPI	GGNCC	1 cut(s)	1879
PstNI	CAGNNNCTG	2 cut(s)	1285, 1790
PsyI	GACNNNGTC	2 cut(s)	1829, 2030
PvuII	CAGCTG	1 cut(s)	485
RsaI	GTAC	4 cut(s)	179, 400, 656, 2099
RsaNI	GTAC	4 cut(s)	178, 399, 655, 2098
RseI	CAYNNNNRTG	1 cut(s)	1548
SacI	GAGCTC	2 cut(s)	1926, 2085
SatI	GCNGC	5 cut(s)	136, 483, 1182, 1220, 1935
Sau3AI	GATC	7 cut(s)	3, 58, 74, 504, 805, 1362, 1531
Sau96I	GGNCC	1 cut(s)	1879
SchI	GAGTC	4 cut(s)	379, 1484, 1624, 2012
ScrFI	CCNGG	4 cut(s)	205, 375, 574, 1439
SduI	GDGCHC	4 cut(s)	127, 1846, 1926, 2085
SfaNI	GCATC	7 cut(s)	24, 544, 786, 940, 1143, 1327, 1465
SfuI	TTCGAA	1 cut(s)	500
SmiMI	CAYNNNNRTG	1 cut(s)	1548
SmlI	CTYRAG	7 cut(s)	128, 290, 761, 980, 1691, 1925, 2118
SmoI	CTYRAG	7 cut(s)	128, 290, 761, 980, 1691, 1925, 2118
SseBI	AGGCCT	1 cut(s)	2075
SsiI	CCGC	5 cut(s)	331, 410, 432, 491, 1220
SspMI	CTAG	2 cut(s)	354, 684
SstI	GAGCTC	2 cut(s)	1926, 2085
StuI	AGGCCT	1 cut(s)	2075
StyD4I	CCNGG	4 cut(s)	203, 373, 572, 1437
StyI	CCWWGG	2 cut(s)	187, 1753
TaaI	ACNGT	8 cut(s)	398, 479, 697, 827, 872, 1349, 1360, 1848
TaiI	ACGT	2 cut(s)	244, 973
TaqI	TCGA	5 cut(s)	160, 500, 663, 941, 1530
TatI	WGTACW	3 cut(s)	398, 654, 2097
TauI	GCSGC	1 cut(s)	1222
TfiI	GAWTC	6 cut(s)	65, 280, 446, 677, 728, 1282
TscAI	CASTG	3 cut(s)	700, 1363, 2061
TseFI	GTSAC	2 cut(s)	19, 691
TseI	GCWGC	4 cut(s)	135, 482, 1181, 1934
Tsp45I	GTSAC	2 cut(s)	19, 691
TspDTI	ATGAA	7 cut(s)	378, 485, 596, 713, 741, 1163, 2144
TspGWI	ACGGA	4 cut(s)	290, 872, 1286, 1622
TspRI	CASTG	3 cut(s)	700, 1363, 2061
Tth111I	GACNNNGTC	2 cut(s)	1829, 2030
Van91I	CCANNNNNTGG	1 cut(s)	1790
Vha464I	CTTAAG	3 cut(s)	128, 290, 1691
VneI	GTGCAC	1 cut(s)	1842
XagI	CCTNNNNNAGG	2 cut(s)	1956, 2141
XapI	RAATTY	8 cut(s)	962, 994, 1024, 1046, 1193, 1658, 1667, 1732
XceI	RCATGY	3 cut(s)	20, 178, 1801
XmiI	GTMKAC	1 cut(s)	1744
XspI	CTAG	2 cut(s)	354, 684

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.