pycom10g17270

Encoded by

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Reverse (-)
20487680 .. 20489023
1344 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1344 bp
ATGCGTTTTTCTCAACATGGATTTGATACAGGTAGCCACAGGAGAGAAGGTGGGTGGCCGCAATTTAGGTCCAAGTATATGACAGCTGAAGAAATTGAAAATATACTCCGAATGCAGCTAGCCGCGACACACAGCAATGACCCATATGTGGATGATTACTACCACCAGTTTTGCCTTGCAAGAAAATCTGCTGGGGCCAAGTTGAAACACCATTTCTGCCCAACTCAATTAAGGGATCTTCCTCCTCGAGCACGAGCTAATACTGAACCACATGCTTTTCTCCAGGTTGATGCTCTTGGGAGGGTCCCCTTTTCCTCAATACGTAGGCCTCGCCCTCTTCTTGAAGTTGAGCCTCCAAATTCATCTAGCCCTGGCAACACTGAACAAAAGGTTTCTGAGAAGCCGCTAGAACAGGAGCCAATGCTTGGTGCTAGGGTTGCAATTGAGGATGGGCTTTGTCTTCTCCTGGATGTGGATGACATTGATCGTTTTCTGCAATTCAGTCAACTCCAAGATGGTGGAACCCAGTTGAGGCGTAGGCGGCAGGCCTTGCTTGAAGGACTTGCAGGATCTCTTCAATTGGTTGACCCACTCGGCAACAATGGCCCCACAGTTGGGCTTCATAAGGATGATCTTGTATTTCTAAGGTTAGTCTCACTTCCCAAGGGCCGGAAGCTCCTGGCAAAGTACCTGCAGCTTTTATTTACAGGTGGTGAGCTCATGCGAGTAGTCTGTATGGCCATCTTTCGTCATTTAAGGTTCTTGTTTGGTAGCTACCCTGCTGATTCAGGGGCCGCAGAAACTACAAGTGTTCTTGCAAGGGTTGTTTCATCATGTGCTCGAGGTATGGACCTTGGTGCACTTAGTGCCTGTCTTGCAGCAGTGGTTTGTTCCTCAGAGCAACCCCCCCTTCGCCCCCTTGGAAGCCCTGCAGGAGATGGGGCCTCTCTTATCCTCAATTCAGTTCTTGAGAGGGCAACTGAACTCTTAACTGATCCTCATGCTGCAAGCAACTACAATATGACCAATCGCCAACTTTGGCAGGCCTCCTTTGATGAATTCTTTGGCCTTCTGACCAAGTATTGTGTAAATAAATATGATACTGTTATGCAGTCACTTCTAATGCAGGCCCCTCCAAATGTGGCTGTTATTGGCTCAGATGCTGCCAGAGCTATTGGTCGTGAAATGCCAGTTGAGCTGTTGCGTGCTAGCCTTCCTCACACTGATGAGCATCAGAGACAGCTGTTGATGGACTTCACGCAGCGGTCTATGCCCATAGGAGCATCTAACAGTCATGATGGGGGAAATGGTGCTCACATGAATTCAGAGTCTGTGCTGAGCTGA

Protein Analysis

448

Amino Acids

49.29

Weight (kDa)

6.71

Isoelectric Point (pI)

53.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0011339)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 699
AccB7I CCANNNNNTGG 1 cut(s) 425
AccII CGCG 1 cut(s) 125
AciI CCGC 6 cut(s) 59, 123, 404, 541, 795, 1264
AclWI GGATC 3 cut(s) 243, 577, 989
AcoI YGGCCR 2 cut(s) 56, 738
AcsI RAATTY 3 cut(s) 358, 1058, 1321
AcuI CTGAAG 1 cut(s) 108
AdeI CACNNNGTG 1 cut(s) 866
AfaI GTAC 1 cut(s) 689
AfiI CCNNNNNNNGG 7 cut(s) 148, 425, 472, 531, 614, 615, 669
AgsI TTSAA 5 cut(s) 98, 205, 344, 557, 578
AjnI CCWGG 4 cut(s) 282, 370, 465, 678
Alw21I GWGCWC 5 cut(s) 253, 720, 841, 862, 1315
Alw26I GTCTC 2 cut(s) 658, 1231
Alw44I GTGCAC 1 cut(s) 858
AlwI GGATC 3 cut(s) 243, 577, 989
AlwNI CAGNNNCTG 2 cut(s) 1163, 1331
Ama87I CYCGRG 2 cut(s) 246, 840
ApaLI GTGCAC 1 cut(s) 858
ApeKI GCWGC 6 cut(s) 115, 694, 878, 1004, 1163, 1261
ApoI RAATTY 3 cut(s) 358, 1058, 1321
AspS9I GGNCC 9 cut(s) 69, 195, 304, 605, 667, 792, 850, 942, 1129
AsuHPI GGTGA 1 cut(s) 725
AsuNHI GCTAGC 2 cut(s) 118, 1208
AvaI CYCGRG 2 cut(s) 246, 840
AvaII GGWCC 3 cut(s) 69, 304, 850
BaeGI GKGCMC 1 cut(s) 862
BalI TGGCCA 1 cut(s) 740
BanII GRGCYC 1 cut(s) 720
BauI CACGAG 1 cut(s) 252
BbsI GAAGAC 1 cut(s) 452
Bbv12I GWGCWC 5 cut(s) 253, 720, 841, 862, 1315
BbvI GCAGC 6 cut(s) 127, 706, 890, 991, 1150, 1273
BccI CCATC 6 cut(s) 443, 509, 749, 932, 1243, 1292
BciT130I CCWGG 4 cut(s) 284, 372, 467, 680
BcoDI GTCTC 2 cut(s) 658, 1231
BfaI CTAG 5 cut(s) 119, 366, 407, 432, 1209
BfmI CTRYAG 2 cut(s) 692, 930
BfuAI ACCTGC 1 cut(s) 699
BlpI GCTNAGC 1 cut(s) 1337
Bme1390I CCNGG 4 cut(s) 284, 372, 467, 680
Bme18I GGWCC 3 cut(s) 69, 304, 850
BmeT110I CYCGRG 2 cut(s) 246, 840
BmgT120I GGNCC 9 cut(s) 69, 195, 304, 605, 667, 792, 850, 942, 1129
BmiI GGNNCC 9 cut(s) 196, 305, 306, 417, 523, 607, 793, 943, 1131
BmrFI CCNGG 4 cut(s) 284, 372, 467, 680
BmrI ACTGGG 1 cut(s) 520
BmsI GCATC 4 cut(s) 280, 1150, 1240, 1292
BmtI GCTAGC 2 cut(s) 122, 1212
BmuI ACTGGG 1 cut(s) 520
BpiI GAAGAC 1 cut(s) 452
BpmI CTGGAG 1 cut(s) 266
Bpu1102I GCTNAGC 1 cut(s) 1337
BpuEI CTTGAG 1 cut(s) 989
BsaAI YACGTR 1 cut(s) 323
BsaBI GATNNNNATC 1 cut(s) 1230
BsaJI CCNNGG 4 cut(s) 370, 663, 853, 919
BsaXI ACNNNNNCTCC 2 cut(s) 34, 64
Bsc4I CCNNNNNNNGG 7 cut(s) 148, 425, 472, 531, 614, 615, 669
Bse1I ACTGG 3 cut(s) 166, 526, 1190
Bse3DI GCAATG 1 cut(s) 142
Bse8I GATNNNNATC 1 cut(s) 1230
BseBI CCWGG 4 cut(s) 284, 372, 467, 680
BseDI CCNNGG 4 cut(s) 370, 663, 853, 919
BseGI GGATG 5 cut(s) 157, 454, 475, 481, 634
BseJI GATNNNNATC 1 cut(s) 1230
BseLI CCNNNNNNNGG 7 cut(s) 148, 425, 472, 531, 614, 615, 669
BseMI GCAATG 1 cut(s) 142
BseMII CTCAG 4 cut(s) 387, 909, 1170, 1328
BseNI ACTGG 3 cut(s) 166, 526, 1190
BseRI GAGGAG 1 cut(s) 234
BseSI GKGCMC 1 cut(s) 862
BseXI GCAGC 6 cut(s) 127, 706, 890, 991, 1150, 1273
BseYI CCCAGC 1 cut(s) 191
Bsh1236I CGCG 1 cut(s) 125
BsiHKAI GWGCWC 5 cut(s) 253, 720, 841, 862, 1315
BsiHKCI CYCGRG 2 cut(s) 246, 840
BsiSI CCGG 1 cut(s) 670
BslFI GGGAC 1 cut(s) 290
BslI CCNNNNNNNGG 7 cut(s) 148, 425, 472, 531, 614, 615, 669
BsmAI GTCTC 2 cut(s) 658, 1231
BsmFI GGGAC 1 cut(s) 290
BsmI GAATGC 1 cut(s) 117
BsoBI CYCGRG 2 cut(s) 246, 840
Bsp1286I GDGCHC 5 cut(s) 253, 720, 841, 862, 1315
Bsp143I GATC 5 cut(s) 235, 484, 569, 631, 994
Bsp1720I GCTNAGC 1 cut(s) 1337
BspACI CCGC 6 cut(s) 59, 123, 404, 541, 795, 1264
BspCNI CTCAG 4 cut(s) 388, 908, 1169, 1329
BspFNI CGCG 1 cut(s) 125
BspHI TCATGA 1 cut(s) 1294
BspLI GGNNCC 9 cut(s) 196, 305, 306, 417, 523, 607, 793, 943, 1131
BspMAI CTGCAG 2 cut(s) 696, 934
BspMI ACCTGC 1 cut(s) 699
BspOI GCTAGC 2 cut(s) 122, 1212
BspPI GGATC 3 cut(s) 243, 577, 989
BsrDI GCAATG 1 cut(s) 142
BsrI ACTGG 3 cut(s) 166, 526, 1190
BssECI CCNNGG 4 cut(s) 370, 663, 853, 919
BssMI GATC 5 cut(s) 235, 484, 569, 631, 994
BssSI CACGAG 1 cut(s) 252
BssT1I CCWWGG 3 cut(s) 663, 853, 919
Bst2BI CACGAG 1 cut(s) 252
Bst2UI CCWGG 4 cut(s) 284, 372, 467, 680
Bst4CI ACNGT 3 cut(s) 613, 1105, 1292
Bst6I CTCTTC 2 cut(s) 342, 579
BstAPI GCANNNNNTGC 2 cut(s) 550, 866
BstBAI YACGTR 1 cut(s) 323
BstC8I GCNNGC 7 cut(s) 120, 546, 1009, 1044, 1128, 1206, 1210
BstDEI CTNAG 6 cut(s) 396, 644, 863, 895, 1156, 1337
BstF5I GGATG 5 cut(s) 157, 454, 475, 481, 634
BstFNI CGCG 1 cut(s) 125
BstKTI GATC 5 cut(s) 238, 487, 572, 634, 997
BstMAI GTCTC 2 cut(s) 658, 1231
BstMBI GATC 5 cut(s) 235, 484, 569, 631, 994
BstMWI GCNNNNNNNGC 9 cut(s) 437, 541, 550, 603, 866, 875, 1169, 1195, 1270
BstNI CCWGG 4 cut(s) 284, 372, 467, 680
BstNSI RCATGY 1 cut(s) 275
BstSCI CCNGG 4 cut(s) 282, 370, 465, 678
BstSFI CTRYAG 2 cut(s) 692, 930
BstSLI GKGCMC 1 cut(s) 862
BstSNI TACGTA 1 cut(s) 323
BstUI CGCG 1 cut(s) 125
BstV1I GCAGC 6 cut(s) 127, 706, 890, 991, 1150, 1273
BstV2I GAAGAC 1 cut(s) 452
BstX2I RGATCY 2 cut(s) 235, 569
BstXI CCANNNNNNTGG 1 cut(s) 518
BstYI RGATCY 2 cut(s) 235, 569
BtsCI GGATG 5 cut(s) 157, 454, 475, 481, 634
BtsI GCAGTG 1 cut(s) 888
BtsIMutI CAGTG 3 cut(s) 378, 888, 1221
BveI ACCTGC 1 cut(s) 699
Cac8I GCNNGC 7 cut(s) 120, 546, 1009, 1044, 1128, 1206, 1210
CaiI CAGNNNCTG 2 cut(s) 1163, 1331
CciI TCATGA 1 cut(s) 1294
Cfr13I GGNCC 9 cut(s) 69, 195, 304, 605, 667, 792, 850, 942, 1129
Csp6I GTAC 1 cut(s) 688
CspCI CAANNNNNGTGG 2 cut(s) 152, 187
CviAII CATG 7 cut(s) 17, 272, 721, 834, 1001, 1295, 1318
CviQI GTAC 1 cut(s) 688
DdeI CTNAG 6 cut(s) 396, 644, 863, 895, 1156, 1337
DpnI GATC 5 cut(s) 237, 486, 571, 633, 996
DpnII GATC 5 cut(s) 235, 484, 569, 631, 994
DraIII CACNNNGTG 1 cut(s) 866
EaeI YGGCCR 2 cut(s) 56, 738
Eam1104I CTCTTC 2 cut(s) 342, 579
EarI CTCTTC 2 cut(s) 342, 579
Ecl136II GAGCTC 1 cut(s) 718
Eco105I TACGTA 1 cut(s) 323
Eco130I CCWWGG 3 cut(s) 663, 853, 919
Eco147I AGGCCT 3 cut(s) 328, 548, 1046
Eco24I GRGCYC 1 cut(s) 720
Eco47I GGWCC 3 cut(s) 69, 304, 850
Eco53kI GAGCTC 1 cut(s) 718
Eco57I CTGAAG 1 cut(s) 108
Eco88I CYCGRG 2 cut(s) 246, 840
EcoICRI GAGCTC 1 cut(s) 718
EcoO109I RGGNCCY 3 cut(s) 304, 942, 1129
EcoRI GAATTC 2 cut(s) 1058, 1321
EcoRII CCWGG 4 cut(s) 282, 370, 465, 678
EcoT14I CCWWGG 3 cut(s) 663, 853, 919
EcoT38I GRGCYC 1 cut(s) 720
ErhI CCWWGG 3 cut(s) 663, 853, 919
FaeI CATG 7 cut(s) 20, 275, 724, 837, 1004, 1298, 1321
FaqI GGGAC 1 cut(s) 290
FatI CATG 7 cut(s) 16, 271, 720, 833, 1000, 1294, 1317
FauNDI CATATG 1 cut(s) 145
FokI GGATG 5 cut(s) 164, 461, 482, 488, 641
FriOI GRGCYC 1 cut(s) 720
FspBI CTAG 5 cut(s) 119, 366, 407, 432, 1209
GsaI CCCAGC 1 cut(s) 195
GsuI CTGGAG 1 cut(s) 266
HapII CCGG 1 cut(s) 670
Hin1II CATG 7 cut(s) 20, 275, 724, 837, 1004, 1298, 1321
HincII GTYRAC 2 cut(s) 506, 586
HindII GTYRAC 2 cut(s) 506, 586
HinfI GANTC 2 cut(s) 785, 1328
HpaII CCGG 1 cut(s) 670
HphI GGTGA 1 cut(s) 725
Hpy166II GTNNAC 3 cut(s) 506, 586, 860
Hpy188I TCNGA 7 cut(s) 110, 397, 898, 1074, 1159, 1236, 1327
Hpy188III TCNNGA 4 cut(s) 341, 968, 1181, 1295
Hpy8I GTNNAC 3 cut(s) 506, 586, 860
HpyAV CCTTC 5 cut(s) 41, 551, 920, 1079, 1223
HpyCH4III ACNGT 3 cut(s) 613, 1105, 1292
HpyCH4IV ACGT 1 cut(s) 322
HpyF10VI GCNNNNNNNGC 9 cut(s) 437, 541, 550, 603, 866, 875, 1169, 1195, 1270
HpyF3I CTNAG 6 cut(s) 396, 644, 863, 895, 1156, 1337
HpySE526I ACGT 1 cut(s) 322
Hsp92II CATG 7 cut(s) 20, 275, 724, 837, 1004, 1298, 1321
KflI GGGWCCC 1 cut(s) 304
Kzo9I GATC 5 cut(s) 235, 484, 569, 631, 994
LmnI GCTCC 3 cut(s) 415, 681, 1280
Lsp1109I GCAGC 6 cut(s) 127, 706, 890, 991, 1150, 1273
LweI GCATC 4 cut(s) 280, 1150, 1240, 1292
MaeI CTAG 5 cut(s) 119, 366, 407, 432, 1209
MaeII ACGT 1 cut(s) 322
MaeIII GTNAC 1 cut(s) 1113
MalI GATC 5 cut(s) 237, 486, 571, 633, 996
MboI GATC 5 cut(s) 235, 484, 569, 631, 994
MboII GAAGA 5 cut(s) 101, 230, 329, 452, 566
MfeI CAATTG 2 cut(s) 441, 578
MflI RGATCY 2 cut(s) 235, 569
MhlI GDGCHC 5 cut(s) 253, 720, 841, 862, 1315
MlsI TGGCCA 1 cut(s) 740
MluNI TGGCCA 1 cut(s) 740
MlyI GAGTC 1 cut(s) 1337
Mox20I TGGCCA 1 cut(s) 740
MscI TGGCCA 1 cut(s) 740
MseI TTAA 3 cut(s) 230, 755, 989
MslI CAYNNNNRTG 3 cut(s) 135, 627, 1224
Msp20I TGGCCA 1 cut(s) 740
MspA1I CMGCKG 3 cut(s) 86, 1243, 1264
MspI CCGG 1 cut(s) 670
MspR9I CCNGG 4 cut(s) 284, 372, 467, 680
MunI CAATTG 2 cut(s) 441, 578
Mva1269I GAATGC 1 cut(s) 117
MvaI CCWGG 4 cut(s) 284, 372, 467, 680
MvnI CGCG 1 cut(s) 125
MwoI GCNNNNNNNGC 9 cut(s) 437, 541, 550, 603, 866, 875, 1169, 1195, 1270
NdeI CATATG 1 cut(s) 145
NdeII GATC 5 cut(s) 235, 484, 569, 631, 994
NheI GCTAGC 2 cut(s) 118, 1208
NlaIII CATG 7 cut(s) 20, 275, 724, 837, 1004, 1298, 1321
NlaIV GGNNCC 9 cut(s) 196, 305, 306, 417, 523, 607, 793, 943, 1131
NmeAIII GCCGAG 1 cut(s) 573
NmuCI GTSAC 1 cut(s) 1113
NspI RCATGY 1 cut(s) 275
PaeR7I CTCGAG 2 cut(s) 246, 840
PagI TCATGA 1 cut(s) 1294
PceI AGGCCT 3 cut(s) 328, 548, 1046
PctI GAATGC 1 cut(s) 117
PfeI GAWTC 1 cut(s) 785
PflMI CCANNNNNTGG 1 cut(s) 425
PfoI TCCNGGA 1 cut(s) 465
PleI GAGTC 1 cut(s) 1336
PpsI GAGTC 1 cut(s) 1336
Ppu21I YACGTR 1 cut(s) 323
PpuMI RGGWCCY 1 cut(s) 304
Psp124BI GAGCTC 1 cut(s) 720
Psp5II RGGWCCY 1 cut(s) 304
Psp6I CCWGG 4 cut(s) 282, 370, 465, 678
PspFI CCCAGC 1 cut(s) 191
PspGI CCWGG 4 cut(s) 282, 370, 465, 678
PspN4I GGNNCC 9 cut(s) 196, 305, 306, 417, 523, 607, 793, 943, 1131
PspPI GGNCC 9 cut(s) 69, 195, 304, 605, 667, 792, 850, 942, 1129
PspPPI RGGWCCY 1 cut(s) 304
PspXI VCTCGAGB 2 cut(s) 246, 840
PstI CTGCAG 2 cut(s) 696, 934
PstNI CAGNNNCTG 2 cut(s) 1163, 1331
PsuI RGATCY 2 cut(s) 235, 569
PvuII CAGCTG 2 cut(s) 86, 1243
RsaI GTAC 1 cut(s) 689
RsaNI GTAC 1 cut(s) 688
RseI CAYNNNNRTG 3 cut(s) 135, 627, 1224
SacI GAGCTC 1 cut(s) 720
SaqAI TTAA 3 cut(s) 230, 755, 989
Sau3AI GATC 5 cut(s) 235, 484, 569, 631, 994
Sau96I GGNCC 9 cut(s) 69, 195, 304, 605, 667, 792, 850, 942, 1129
SbfI CCTGCAGG 1 cut(s) 934
SchI GAGTC 1 cut(s) 1337
ScrFI CCNGG 4 cut(s) 284, 372, 467, 680
SdaI CCTGCAGG 1 cut(s) 934
SduI GDGCHC 5 cut(s) 253, 720, 841, 862, 1315
SfaNI GCATC 4 cut(s) 280, 1150, 1240, 1292
SfcI CTRYAG 2 cut(s) 692, 930
Sfr274I CTCGAG 2 cut(s) 246, 840
SinI GGWCC 3 cut(s) 69, 304, 850
SlaI CTCGAG 2 cut(s) 246, 840
SmiMI CAYNNNNRTG 3 cut(s) 135, 627, 1224
SmlI CTYRAG 3 cut(s) 246, 840, 968
SmoI CTYRAG 3 cut(s) 246, 840, 968
SnaBI TACGTA 1 cut(s) 323
Sse8387I CCTGCAGG 1 cut(s) 934
SseBI AGGCCT 3 cut(s) 328, 548, 1046
SsiI CCGC 6 cut(s) 59, 123, 404, 541, 795, 1264
SspMI CTAG 5 cut(s) 119, 366, 407, 432, 1209
SstI GAGCTC 1 cut(s) 720
StuI AGGCCT 3 cut(s) 328, 548, 1046
StyD4I CCNGG 4 cut(s) 282, 370, 465, 678
StyI CCWWGG 3 cut(s) 663, 853, 919
TaaI ACNGT 3 cut(s) 613, 1105, 1292
TaiI ACGT 1 cut(s) 325
TaqI TCGA 2 cut(s) 247, 841
TauI GCSGC 5 cut(s) 61, 125, 406, 544, 797
TfiI GAWTC 1 cut(s) 785
Tru1I TTAA 3 cut(s) 230, 755, 989
Tru9I TTAA 3 cut(s) 230, 755, 989
TscAI CASTG 3 cut(s) 385, 888, 1228
TseFI GTSAC 1 cut(s) 1113
TseI GCWGC 6 cut(s) 115, 694, 878, 1004, 1163, 1261
Tsp45I GTSAC 1 cut(s) 1113
TspDTI ATGAA 5 cut(s) 351, 611, 819, 1071, 1334
TspRI CASTG 3 cut(s) 385, 888, 1228
Van91I CCANNNNNTGG 1 cut(s) 425
VneI GTGCAC 1 cut(s) 858
VpaK11BI GGWCC 3 cut(s) 69, 304, 850
XapI RAATTY 3 cut(s) 358, 1058, 1321
XceI RCATGY 1 cut(s) 275
XhoI CTCGAG 2 cut(s) 246, 840
XspI CTAG 5 cut(s) 119, 366, 407, 432, 1209
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.