pycom10g20350

Alpha N-terminal protein methyltransferase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
Physical Location & Seq
Forward (+)
23265292 .. 23268795
3504 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1038 bp
ATGATCATGCCACGTCACAGAATCTTTCATCGTCATCGTCCAGATCATAGGTTTTCAAACTTTTTCATGCAGCATCACTCCATTTTATGCTCCCAGCTACTTTCAAAAGACTTCATCTTTGCCGCCGTGCGACGTTGTTTTGCCAAGGAACCGTTTAAAGCACCCAACAGCCGCCGAAACAGAACGGAAACTCGAGTGTCAATGGAGAAAGGAGGGTTAGACTCCGCCGGCCGAGAATTCAAGAACGCGGAGGAGATGTGGAGGGAGCAGGTCGGGGACGACCACAGCAAGAAGACCGAGTGGTACCGCCAAGGCGTTGGCTACTGGGAAGGTGTGGAGGCGTCGACCAATGGAGTGTTGGGAGGATATGCGCAGGTGAATGAGCCTGACATAATGGGCAGTGAAGCTTTTCTTAAGCAGCTTCTCTCTGAGCGTTTTCCCGACTCTGCAAATGGCCAACGTCACCTTGTTGTTCTTGATTGTGGTTCTGGCATTGGCAGAGTCTCCAAAAATCTTCTCATAAGATACTTCAATGAGGTTGATCTTCTTGAGCCTGTATCTCATTTCTTGGAAACTGCTCGTGAAAGTCTGGCTCCTGAAAATCATATGGTCTCTGAGACGCACAAAGCTACTAACTTTTTCTGCGTGCCTCTTCAGGAATTCACACCAGAAGCAGGGAGGTACGACATTATATGGGTTCAATGGTGTATTGGTCATCTGACAGATGATGACTTCGTCTCATTCTTTAAACGGGCAAAGGTTGGATTAAAACCTGGTGGTCTTTTTGTTCTGAAGGAAAATATTGCAAGATCCGGATTCGTGTTAGACACAGAAGATCGGAGTGTCACTAGGTCTGATTTGTACTTTAAGGAGCTCTTTCGTCAATGTGGACTTCATCTTTACATATCAAAGGATCAAAAGGGATTGCCTGAAGAACTATTCGCCGTGAAAATGTATGCATTAACTACTGAGTTGCCAAAGAAGGTTCATCGGACAAGATCTAAAGTGCAAGCCAACAGACCCGGAGTCATCAAGTGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

346

Amino Acids

39.77

Weight (kDa)

8.92

Isoelectric Point (pI)

37.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Methyltransf_PK PF05891 98 - 322 2.1e-93 AdoMet dependent proline di-methyltransferase
Methyltransf_23 PF13489 140 - 266 4.2e-06 Methyltransferase domain
Methyltransf_25 PF13649 158 - 260 1.9e-09 Methyltransferase domain
Methyltransf_11 PF08241 159 - 264 1.1e-07 Methyltransferase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0011459)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 364
Acc16I TGCGCA 1 cut(s) 372
Acc36I ACCTGC 2 cut(s) 259, 364
Acc65I GGTACC 1 cut(s) 303
AccB1I GGYRCC 1 cut(s) 303
AccI GTMKAC 1 cut(s) 344
AccII CGCG 1 cut(s) 248
AccIII TCCGGA 1 cut(s) 812
AciI CCGC 5 cut(s) 123, 172, 225, 248, 307
AclWI GGATC 2 cut(s) 804, 921
AcoI YGGCCR 2 cut(s) 229, 454
AcsI RAATTY 2 cut(s) 236, 659
AcuI CTGAAG 3 cut(s) 638, 812, 951
AcyI GRCGYC 1 cut(s) 341
AfaI GTAC 3 cut(s) 305, 683, 863
AfiI CCNNNNNNNGG 1 cut(s) 674
AflII CTTAAG 1 cut(s) 413
AgsI TTSAA 5 cut(s) 57, 105, 241, 532, 701
AhdI GACNNNNNGTC 1 cut(s) 1025
AjiI CACGTC 1 cut(s) 14
AjnI CCWGG 1 cut(s) 772
AluBI AGCT 5 cut(s) 97, 407, 421, 629, 874
AluI AGCT 5 cut(s) 97, 407, 421, 629, 874
Alw21I GWGCWC 1 cut(s) 876
Alw26I GTCTC 4 cut(s) 508, 611, 616, 742
AlwI GGATC 2 cut(s) 804, 921
Ama87I CYCGRG 1 cut(s) 192
Aor13HI TCCGGA 1 cut(s) 812
AoxI GGCC 2 cut(s) 229, 454
ApeKI GCWGC 2 cut(s) 70, 418
ApoI RAATTY 2 cut(s) 236, 659
ArsI GACNNNNNNTTYG 2 cut(s) 101, 133
Asp700I GAANNNNTTC 1 cut(s) 408
Asp718I GGTACC 1 cut(s) 303
AspLEI GCGC 1 cut(s) 373
AsuC2I CCSGG 1 cut(s) 1023
AsuHPI GGTGA 2 cut(s) 388, 455
AvaI CYCGRG 1 cut(s) 192
BalI TGGCCA 1 cut(s) 456
BanI GGYRCC 1 cut(s) 303
BanII GRGCYC 1 cut(s) 876
BauI CACGAG 1 cut(s) 579
BbsI GAAGAC 1 cut(s) 299
Bbv12I GWGCWC 1 cut(s) 876
BbvI GCAGC 2 cut(s) 82, 430
BceAI ACGGC 2 cut(s) 110, 929
BciT130I CCWGG 1 cut(s) 774
BclI TGATCA 1 cut(s) 3
BcnI CCSGG 1 cut(s) 1023
BcoDI GTCTC 4 cut(s) 508, 611, 616, 742
BfaI CTAG 1 cut(s) 849
BfrI CTTAAG 1 cut(s) 413
BfuAI ACCTGC 2 cut(s) 259, 364
BglII AGATCT 1 cut(s) 998
BisI GCNGC 4 cut(s) 71, 123, 172, 419
BlsI GCNGC 4 cut(s) 72, 124, 173, 420
Bme1390I CCNGG 2 cut(s) 774, 1023
BmeRI GACNNNNNGTC 1 cut(s) 1025
BmeT110I CYCGRG 1 cut(s) 192
BmgBI CACGTC 1 cut(s) 14
BmiI GGNNCC 3 cut(s) 150, 305, 594
BmrFI CCNGG 2 cut(s) 774, 1023
BmrI ACTGGG 1 cut(s) 334
BmsI GCATC 1 cut(s) 82
BmuI ACTGGG 1 cut(s) 334
BpiI GAAGAC 1 cut(s) 299
BpuEI CTTGAG 1 cut(s) 569
BpuMI CCSGG 1 cut(s) 1023
BsaHI GRCGYC 1 cut(s) 341
BsaI GGTCTC 1 cut(s) 616
BsaJI CCNNGG 2 cut(s) 144, 310
BsaWI WCCGGW 1 cut(s) 812
BsaXI ACNNNNNCTCC 2 cut(s) 242, 272
Bsc4I CCNNNNNNNGG 1 cut(s) 674
Bse118I RCCGGY 1 cut(s) 227
Bse1I ACTGG 1 cut(s) 329
BseAI TCCGGA 1 cut(s) 812
BseBI CCWGG 1 cut(s) 774
BseDI CCNNGG 2 cut(s) 144, 310
BseLI CCNNNNNNNGG 1 cut(s) 674
BseMII CTCAG 3 cut(s) 420, 606, 960
BseNI ACTGG 1 cut(s) 329
BseRI GAGGAG 1 cut(s) 266
BseX3I CGGCCG 1 cut(s) 229
BseXI GCAGC 2 cut(s) 82, 430
BseYI CCCAGC 1 cut(s) 93
Bsh1236I CGCG 1 cut(s) 248
Bsh1285I CGRYCG 1 cut(s) 232
BshFI GGCC 2 cut(s) 231, 456
BshNI GGYRCC 1 cut(s) 303
BsiEI CGRYCG 1 cut(s) 232
BsiHKAI GWGCWC 1 cut(s) 876
BsiHKCI CYCGRG 1 cut(s) 192
BsiSI CCGG 3 cut(s) 228, 813, 1023
BslFI GGGAC 1 cut(s) 290
BslI CCNNNNNNNGG 1 cut(s) 674
BsmAI GTCTC 4 cut(s) 508, 611, 616, 742
BsmBI CGTCTC 2 cut(s) 611, 742
BsmFI GGGAC 1 cut(s) 290
BsnI GGCC 2 cut(s) 231, 456
Bso31I GGTCTC 1 cut(s) 616
BsoBI CYCGRG 1 cut(s) 192
Bsp1286I GDGCHC 1 cut(s) 876
Bsp13I TCCGGA 1 cut(s) 812
Bsp143I GATC 7 cut(s) 3, 43, 541, 809, 835, 913, 998
BspACI CCGC 5 cut(s) 123, 172, 225, 248, 307
BspANI GGCC 2 cut(s) 231, 456
BspCNI CTCAG 3 cut(s) 421, 607, 961
BspEI TCCGGA 1 cut(s) 812
BspFNI CGCG 1 cut(s) 248
BspLI GGNNCC 3 cut(s) 150, 305, 594
BspMI ACCTGC 2 cut(s) 259, 364
BspPI GGATC 2 cut(s) 804, 921
BspT107I GGYRCC 1 cut(s) 303
BspTI CTTAAG 1 cut(s) 413
BspTNI GGTCTC 1 cut(s) 616
BsrFI RCCGGY 1 cut(s) 227
BsrI ACTGG 1 cut(s) 329
BssAI RCCGGY 1 cut(s) 227
BssECI CCNNGG 2 cut(s) 144, 310
BssMI GATC 7 cut(s) 3, 43, 541, 809, 835, 913, 998
BssNI GRCGYC 1 cut(s) 341
BssSI CACGAG 1 cut(s) 579
BssT1I CCWWGG 2 cut(s) 144, 310
Bst2BI CACGAG 1 cut(s) 579
Bst2UI CCWGG 1 cut(s) 774
Bst4CI ACNGT 1 cut(s) 153
Bst6I CTCTTC 1 cut(s) 657
BstACI GRCGYC 1 cut(s) 341
BstAFI CTTAAG 1 cut(s) 413
BstC8I GCNNGC 3 cut(s) 229, 647, 1011
BstDEI CTNAG 3 cut(s) 429, 615, 969
BstFNI CGCG 1 cut(s) 248
BstHHI GCGC 1 cut(s) 373
BstKTI GATC 7 cut(s) 6, 46, 544, 812, 838, 916, 1001
BstMAI GTCTC 4 cut(s) 508, 611, 616, 742
BstMBI GATC 7 cut(s) 3, 43, 541, 809, 835, 913, 998
BstMCI CGRYCG 1 cut(s) 232
BstNI CCWGG 1 cut(s) 774
BstSCI CCNGG 2 cut(s) 772, 1021
BstUI CGCG 1 cut(s) 248
BstV1I GCAGC 2 cut(s) 82, 430
BstV2I GAAGAC 1 cut(s) 299
BstX2I RGATCY 2 cut(s) 809, 998
BstXI CCANNNNNNTGG 1 cut(s) 317
BstYI RGATCY 2 cut(s) 809, 998
BstZI CGGCCG 1 cut(s) 229
BsuRI GGCC 2 cut(s) 231, 456
BtrI CACGTC 1 cut(s) 14
BtsI GCAGTG 1 cut(s) 406
BtsIMutI CAGTG 1 cut(s) 406
BveI ACCTGC 2 cut(s) 259, 364
Cac8I GCNNGC 3 cut(s) 229, 647, 1011
CfoI GCGC 1 cut(s) 373
Cfr10I RCCGGY 1 cut(s) 227
CseI GACGC 2 cut(s) 330, 628
CsiI ACCWGGT 1 cut(s) 772
Csp6I GTAC 3 cut(s) 304, 682, 862
CviAII CATG 2 cut(s) 7, 67
CviQI GTAC 3 cut(s) 304, 682, 862
DdeI CTNAG 3 cut(s) 429, 615, 969
DpnI GATC 7 cut(s) 5, 45, 543, 811, 837, 915, 1000
DpnII GATC 7 cut(s) 3, 43, 541, 809, 835, 913, 998
DraI TTTAAA 2 cut(s) 157, 748
DriI GACNNNNNGTC 1 cut(s) 1025
EaeI YGGCCR 2 cut(s) 229, 454
EagI CGGCCG 1 cut(s) 229
Eam1104I CTCTTC 1 cut(s) 657
Eam1105I GACNNNNNGTC 1 cut(s) 1025
EarI CTCTTC 1 cut(s) 657
EciI GGCGGA 1 cut(s) 214
Ecl136II GAGCTC 1 cut(s) 874
EclXI CGGCCG 1 cut(s) 229
Eco130I CCWWGG 2 cut(s) 144, 310
Eco24I GRGCYC 1 cut(s) 876
Eco31I GGTCTC 1 cut(s) 616
Eco52I CGGCCG 1 cut(s) 229
Eco53kI GAGCTC 1 cut(s) 874
Eco57I CTGAAG 3 cut(s) 638, 812, 951
Eco88I CYCGRG 1 cut(s) 192
EcoICRI GAGCTC 1 cut(s) 874
EcoRI GAATTC 2 cut(s) 236, 659
EcoRII CCWGG 1 cut(s) 772
EcoT14I CCWWGG 2 cut(s) 144, 310
EcoT22I ATGCAT 1 cut(s) 961
EcoT38I GRGCYC 1 cut(s) 876
ErhI CCWWGG 2 cut(s) 144, 310
Esp3I CGTCTC 2 cut(s) 611, 742
FaeI CATG 2 cut(s) 10, 70
FalI AAGNNNNNCTT 4 cut(s) 396, 428, 860, 892
FaqI GGGAC 1 cut(s) 290
FatI CATG 2 cut(s) 6, 66
FauNDI CATATG 1 cut(s) 606
FbaI TGATCA 1 cut(s) 3
FblI GTMKAC 1 cut(s) 344
Fnu4HI GCNGC 4 cut(s) 71, 123, 172, 419
FriOI GRGCYC 1 cut(s) 876
Fsp4HI GCNGC 4 cut(s) 71, 123, 172, 419
FspBI CTAG 1 cut(s) 849
FspI TGCGCA 1 cut(s) 372
GlaI GCGC 1 cut(s) 372
GluI GCNGC 4 cut(s) 71, 123, 172, 419
GsaI CCCAGC 1 cut(s) 97
HaeIII GGCC 2 cut(s) 231, 456
HapII CCGG 3 cut(s) 228, 813, 1023
HgaI GACGC 2 cut(s) 330, 628
HhaI GCGC 1 cut(s) 373
Hin1I GRCGYC 1 cut(s) 341
Hin1II CATG 2 cut(s) 10, 70
Hin6I GCGC 1 cut(s) 371
HinP1I GCGC 1 cut(s) 371
HincII GTYRAC 1 cut(s) 345
HindII GTYRAC 1 cut(s) 345
HindIII AAGCTT 1 cut(s) 405
HinfI GANTC 6 cut(s) 21, 221, 443, 501, 816, 1026
HpaII CCGG 3 cut(s) 228, 813, 1023
HphI GGTGA 2 cut(s) 388, 455
Hpy166II GTNNAC 2 cut(s) 345, 890
Hpy188I TCNGA 7 cut(s) 430, 616, 720, 792, 840, 856, 993
Hpy188III TCNNGA 9 cut(s) 41, 241, 440, 476, 548, 581, 596, 656, 813
Hpy8I GTNNAC 2 cut(s) 345, 890
Hpy99I CGWCG 2 cut(s) 135, 346
HpyAV CCTTC 3 cut(s) 323, 787, 976
HpyCH4III ACNGT 1 cut(s) 153
HpyCH4IV ACGT 3 cut(s) 13, 133, 460
HpyCH4V TGCA 5 cut(s) 70, 449, 806, 959, 1009
HpyF3I CTNAG 3 cut(s) 429, 615, 969
HpySE526I ACGT 3 cut(s) 13, 133, 460
Hsp92I GRCGYC 1 cut(s) 341
Hsp92II CATG 2 cut(s) 10, 70
HspAI GCGC 1 cut(s) 371
Kpn2I TCCGGA 1 cut(s) 812
KpnI GGTACC 1 cut(s) 307
KroI GCCGGC 1 cut(s) 227
KroNI GCCGGC 1 cut(s) 229
Ksp22I TGATCA 1 cut(s) 3
Kzo9I GATC 7 cut(s) 3, 43, 541, 809, 835, 913, 998
LmnI GCTCC 4 cut(s) 95, 265, 598, 871
Lsp1109I GCAGC 2 cut(s) 82, 430
LweI GCATC 1 cut(s) 82
MabI ACCWGGT 1 cut(s) 772
MaeI CTAG 1 cut(s) 849
MaeII ACGT 3 cut(s) 13, 133, 460
MaeIII GTNAC 3 cut(s) 14, 461, 844
MalI GATC 7 cut(s) 5, 45, 543, 811, 837, 915, 1000
MboI GATC 7 cut(s) 3, 43, 541, 809, 835, 913, 998
MboII GAAGA 6 cut(s) 304, 506, 536, 644, 845, 944
MflI RGATCY 2 cut(s) 809, 998
MhlI GDGCHC 1 cut(s) 876
MlsI TGGCCA 1 cut(s) 456
MluCI AATT 2 cut(s) 236, 659
MluNI TGGCCA 1 cut(s) 456
MlyI GAGTC 4 cut(s) 215, 437, 510, 1035
MmeI TCCRAC 1 cut(s) 742
MnlI CCTC 8 cut(s) 206, 244, 255, 331, 356, 529, 660, 672
Mox20I TGGCCA 1 cut(s) 456
Mph1103I ATGCAT 1 cut(s) 961
MroI TCCGGA 1 cut(s) 812
MroNI GCCGGC 1 cut(s) 227
MroXI GAANNNNTTC 1 cut(s) 408
MscI TGGCCA 1 cut(s) 456
MseI TTAA 6 cut(s) 156, 414, 747, 767, 867, 962
Msp20I TGGCCA 1 cut(s) 456
MspCI CTTAAG 1 cut(s) 413
MspI CCGG 3 cut(s) 228, 813, 1023
MspR9I CCNGG 2 cut(s) 774, 1023
MvaI CCWGG 1 cut(s) 774
MvnI CGCG 1 cut(s) 248
NaeI GCCGGC 1 cut(s) 229
NciI CCSGG 1 cut(s) 1023
NdeI CATATG 1 cut(s) 606
NdeII GATC 7 cut(s) 3, 43, 541, 809, 835, 913, 998
NgoMIV GCCGGC 1 cut(s) 227
NlaIII CATG 2 cut(s) 10, 70
NlaIV GGNNCC 3 cut(s) 150, 305, 594
NmeAIII GCCGAG 1 cut(s) 257
NmuCI GTSAC 3 cut(s) 14, 461, 844
NsbI TGCGCA 1 cut(s) 372
NsiI ATGCAT 1 cut(s) 961
PaeR7I CTCGAG 1 cut(s) 192
PaqCI CACCTGC 1 cut(s) 364
PdiI GCCGGC 1 cut(s) 229
PdmI GAANNNNTTC 1 cut(s) 408
PfeI GAWTC 2 cut(s) 21, 816
PflFI GACNNNGTC 1 cut(s) 734
PkrI GCNGC 4 cut(s) 72, 124, 173, 420
PleI GAGTC 4 cut(s) 215, 437, 509, 1034
PpsI GAGTC 4 cut(s) 215, 437, 509, 1034
Psp124BI GAGCTC 1 cut(s) 876
Psp6I CCWGG 1 cut(s) 772
PspFI CCCAGC 1 cut(s) 93
PspGI CCWGG 1 cut(s) 772
PspN4I GGNNCC 3 cut(s) 150, 305, 594
PspXI VCTCGAGB 1 cut(s) 192
PsuI RGATCY 2 cut(s) 809, 998
PsyI GACNNNGTC 1 cut(s) 734
RsaI GTAC 3 cut(s) 305, 683, 863
RsaNI GTAC 3 cut(s) 304, 682, 862
SacI GAGCTC 1 cut(s) 876
SalI GTCGAC 1 cut(s) 343
SaqAI TTAA 6 cut(s) 156, 414, 747, 767, 867, 962
SatI GCNGC 4 cut(s) 71, 123, 172, 419
Sau3AI GATC 7 cut(s) 3, 43, 541, 809, 835, 913, 998
SchI GAGTC 4 cut(s) 215, 437, 510, 1035
ScrFI CCNGG 2 cut(s) 774, 1023
SduI GDGCHC 1 cut(s) 876
SexAI ACCWGGT 1 cut(s) 772
SfaNI GCATC 1 cut(s) 82
Sfr274I CTCGAG 1 cut(s) 192
SlaI CTCGAG 1 cut(s) 192
SmlI CTYRAG 3 cut(s) 192, 413, 548
SmoI CTYRAG 3 cut(s) 192, 413, 548
Sse9I AATT 2 cut(s) 236, 659
SsiI CCGC 5 cut(s) 123, 172, 225, 248, 307
SspI AATATT 1 cut(s) 802
SspMI CTAG 1 cut(s) 849
SstI GAGCTC 1 cut(s) 876
StyD4I CCNGG 2 cut(s) 772, 1021
StyI CCWWGG 2 cut(s) 144, 310
TaaI ACNGT 1 cut(s) 153
TaiI ACGT 3 cut(s) 16, 136, 463
TaqI TCGA 2 cut(s) 193, 344
TaqII GACCGA 1 cut(s) 311
TasI AATT 2 cut(s) 236, 659
TatI WGTACW 1 cut(s) 861
TauI GCSGC 2 cut(s) 125, 174
TfiI GAWTC 2 cut(s) 21, 816
Tru1I TTAA 6 cut(s) 156, 414, 747, 767, 867, 962
Tru9I TTAA 6 cut(s) 156, 414, 747, 767, 867, 962
TscAI CASTG 1 cut(s) 406
TseFI GTSAC 3 cut(s) 14, 461, 844
TseI GCWGC 2 cut(s) 70, 418
Tsp45I GTSAC 3 cut(s) 14, 461, 844
TspDTI ATGAA 5 cut(s) 17, 55, 103, 884, 977
TspGWI ACGGA 1 cut(s) 200
TspRI CASTG 1 cut(s) 406
Tth111I GACNNNGTC 1 cut(s) 734
Vha464I CTTAAG 1 cut(s) 413
XapI RAATTY 2 cut(s) 236, 659
XcmI CCANNNNNNNNNTGG 1 cut(s) 355
XhoI CTCGAG 1 cut(s) 192
XmiI GTMKAC 1 cut(s) 344
XmnI GAANNNNTTC 1 cut(s) 408
XspI CTAG 1 cut(s) 849
Zsp2I ATGCAT 1 cut(s) 961
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.