Rh5DG133300

Alpha N-terminal protein methyltransferase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
Physical Location & Seq
Forward (+)
13173904 .. 13176959
3056 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG133300.1

Sequence Viewer

Length: 738 bp
ATGCTATTATACTCAGAGCTACTATTAACAAAAGGCTTGACCTTTTTTGGGGCCAAAGACTTCACCTTTAACAAAACCCAGAAAAACTCGGCTAGGATTTCGATGCAGAAAGGTGGGTTGGACTCCGATGGCCGGGAATTCAAGACCGCCGAGGAGATGTGGAGGGAGCAGGTCGGAGATCAGAGCAAGAAGACTGATTGGTACCGTGAAGGCGTTGGCTACTGGGAAGGTGTGGAGGCTTCGAATGATGGAGTGTTGGGTGGATTTGGGCATGTGAGTGAGACTGACATAAGGGATAGTGAAGCTTTTCTTAATGGGATTATATCTGAGGTTTTGCCCAGTGCTGCTAATGGCCAACGCCACCTTGTTGCTCTTGATTGTGGTTCTGGCATTGGGAGGATCACAAAAAATCTTCTCATAAGATACTTCAATGAGGTTGATCTTCTGGAGCCTGTGTCACATTTTTTAGAAACTGCTCGGGAGAGTTTGGCTCCTGAAAATCAGATGGTCTCTGATATGCACAAAGCCACTAATTTTTTCTGCGTGCCTCTTCAGGAATTCACACCAGAAGCAGGAAGATATGATGTTATATGGGTTCAGTGGTGTATTGGCCATCTCACAGATGATGACTTTGTGTCATTCTTTACAAGAGCAAAGGTAGAGCTGTTTTTCATGAATCTTAATGTGAATGTTGGGTTGAAGAAGGCATCAGCTGGAATTGTGAAGTTTGCTTCATAA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

245

Amino Acids

27.47

Weight (kDa)

5.11

Isoelectric Point (pI)

22.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Methyltransf_PK PF05891 64 - 222 2.5e-61 AdoMet dependent proline di-methyltransferase
Methyltransf_25 PF13649 125 - 218 2.4e-06 Methyltransferase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011459)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 160
Acc65I GGTACC 1 cut(s) 201
AccB1I GGYRCC 1 cut(s) 201
AciI CCGC 1 cut(s) 147
AclWI GGATC 1 cut(s) 407
AcoI YGGCCR 3 cut(s) 130, 352, 610
AcsI RAATTY 2 cut(s) 137, 557
AcuI CTGAAG 1 cut(s) 536
AfaI GTAC 1 cut(s) 203
AfiI CCNNNNNNNGG 3 cut(s) 48, 132, 572
AgsI TTSAA 3 cut(s) 142, 430, 700
AhdI GACNNNNNGTC 1 cut(s) 634
AjuI GAANNNNNNNTTGG 2 cut(s) 101, 133
AluBI AGCT 4 cut(s) 19, 305, 664, 713
AluI AGCT 4 cut(s) 19, 305, 664, 713
Alw26I GTCTC 2 cut(s) 275, 514
AlwI GGATC 1 cut(s) 407
Ama87I CYCGRG 1 cut(s) 477
AoxI GGCC 4 cut(s) 51, 130, 352, 610
ApeKI GCWGC 1 cut(s) 344
ApoI RAATTY 2 cut(s) 137, 557
Asp700I GAANNNNTTC 1 cut(s) 306
Asp718I GGTACC 1 cut(s) 201
AspS9I GGNCC 1 cut(s) 51
AsuC2I CCSGG 1 cut(s) 134
AsuHPI GGTGA 1 cut(s) 55
AsuII TTCGAA 1 cut(s) 242
AvaI CYCGRG 1 cut(s) 477
BalI TGGCCA 2 cut(s) 354, 612
BanI GGYRCC 1 cut(s) 201
BbsI GAAGAC 1 cut(s) 197
BbvI GCAGC 1 cut(s) 331
BccI CCATC 4 cut(s) 122, 242, 499, 621
BcnI CCSGG 1 cut(s) 134
BcoDI GTCTC 2 cut(s) 275, 514
BfaI CTAG 1 cut(s) 93
BfuAI ACCTGC 1 cut(s) 160
BisI GCNGC 1 cut(s) 345
BlsI GCNGC 1 cut(s) 346
Bme1390I CCNGG 1 cut(s) 134
BmeRI GACNNNNNGTC 1 cut(s) 634
BmeT110I CYCGRG 1 cut(s) 477
BmgT120I GGNCC 1 cut(s) 51
BmiI GGNNCC 4 cut(s) 52, 203, 450, 492
BmrFI CCNGG 1 cut(s) 134
BmrI ACTGGG 2 cut(s) 232, 333
BmsI GCATC 2 cut(s) 93, 716
BmuI ACTGGG 2 cut(s) 232, 333
BpiI GAAGAC 1 cut(s) 197
BplI GAGNNNNNCTC 2 cut(s) 475, 507
BpmI CTGGAG 1 cut(s) 467
Bpu14I TTCGAA 1 cut(s) 242
BpuMI CCSGG 1 cut(s) 134
BsaI GGTCTC 1 cut(s) 514
BsaJI CCNNGG 1 cut(s) 150
BsaXI ACNNNNNCTCC 2 cut(s) 440, 470
Bsc4I CCNNNNNNNGG 3 cut(s) 48, 132, 572
Bse1I ACTGG 2 cut(s) 227, 339
BseDI CCNNGG 1 cut(s) 150
BseLI CCNNNNNNNGG 3 cut(s) 48, 132, 572
BseMII CTCAG 2 cut(s) 27, 318
BseNI ACTGG 2 cut(s) 227, 339
BseRI GAGGAG 1 cut(s) 167
BseXI GCAGC 1 cut(s) 331
BshFI GGCC 4 cut(s) 53, 132, 354, 612
BshNI GGYRCC 1 cut(s) 201
BsiHKCI CYCGRG 1 cut(s) 477
BsiSI CCGG 1 cut(s) 133
BslI CCNNNNNNNGG 3 cut(s) 48, 132, 572
BsmAI GTCTC 2 cut(s) 275, 514
BsnI GGCC 4 cut(s) 53, 132, 354, 612
Bso31I GGTCTC 1 cut(s) 514
BsoBI CYCGRG 1 cut(s) 477
Bsp119I TTCGAA 1 cut(s) 242
Bsp143I GATC 3 cut(s) 178, 399, 439
BspACI CCGC 1 cut(s) 147
BspANI GGCC 4 cut(s) 53, 132, 354, 612
BspCNI CTCAG 2 cut(s) 26, 319
BspHI TCATGA 1 cut(s) 672
BspLI GGNNCC 4 cut(s) 52, 203, 450, 492
BspMI ACCTGC 1 cut(s) 160
BspPI GGATC 1 cut(s) 407
BspT104I TTCGAA 1 cut(s) 242
BspT107I GGYRCC 1 cut(s) 201
BspTNI GGTCTC 1 cut(s) 514
BsrI ACTGG 2 cut(s) 227, 339
BssECI CCNNGG 1 cut(s) 150
BssMI GATC 3 cut(s) 178, 399, 439
Bst4CI ACNGT 1 cut(s) 206
Bst6I CTCTTC 1 cut(s) 555
BstBI TTCGAA 1 cut(s) 242
BstC8I GCNNGC 1 cut(s) 545
BstDEI CTNAG 2 cut(s) 13, 327
BstKTI GATC 3 cut(s) 181, 402, 442
BstMAI GTCTC 2 cut(s) 275, 514
BstMBI GATC 3 cut(s) 178, 399, 439
BstNSI RCATGY 1 cut(s) 275
BstSCI CCNGG 1 cut(s) 132
BstV1I GCAGC 1 cut(s) 331
BstV2I GAAGAC 1 cut(s) 197
BsuRI GGCC 4 cut(s) 53, 132, 354, 612
BtsIMutI CAGTG 2 cut(s) 346, 605
BveI ACCTGC 1 cut(s) 160
Cac8I GCNNGC 1 cut(s) 545
CciI TCATGA 1 cut(s) 672
Cfr13I GGNCC 1 cut(s) 51
Csp6I GTAC 1 cut(s) 202
CviAII CATG 2 cut(s) 272, 673
CviQI GTAC 1 cut(s) 202
DdeI CTNAG 2 cut(s) 13, 327
DpnI GATC 3 cut(s) 180, 401, 441
DpnII GATC 3 cut(s) 178, 399, 439
DriI GACNNNNNGTC 1 cut(s) 634
EaeI YGGCCR 3 cut(s) 130, 352, 610
Eam1104I CTCTTC 1 cut(s) 555
Eam1105I GACNNNNNGTC 1 cut(s) 634
EarI CTCTTC 1 cut(s) 555
Eco31I GGTCTC 1 cut(s) 514
Eco57I CTGAAG 1 cut(s) 536
Eco88I CYCGRG 1 cut(s) 477
EcoRI GAATTC 2 cut(s) 137, 557
FaeI CATG 2 cut(s) 275, 676
FalI AAGNNNNNCTT 2 cut(s) 294, 326
FatI CATG 2 cut(s) 271, 672
Fnu4HI GCNGC 1 cut(s) 345
Fsp4HI GCNGC 1 cut(s) 345
FspBI CTAG 1 cut(s) 93
GluI GCNGC 1 cut(s) 345
GsuI CTGGAG 1 cut(s) 467
HaeIII GGCC 4 cut(s) 53, 132, 354, 612
HapII CCGG 1 cut(s) 133
Hin1II CATG 2 cut(s) 275, 676
HindIII AAGCTT 1 cut(s) 303
HinfI GANTC 2 cut(s) 122, 676
HpaII CCGG 1 cut(s) 133
HphI GGTGA 1 cut(s) 55
Hpy188I TCNGA 7 cut(s) 16, 127, 176, 183, 328, 504, 514
Hpy188III TCNNGA 7 cut(s) 142, 374, 446, 479, 494, 554, 673
HpyAV CCTTC 3 cut(s) 203, 221, 697
HpyCH4III ACNGT 1 cut(s) 206
HpyCH4V TGCA 2 cut(s) 106, 520
HpyF3I CTNAG 2 cut(s) 13, 327
Hsp92II CATG 2 cut(s) 275, 676
KpnI GGTACC 1 cut(s) 205
Kzo9I GATC 3 cut(s) 178, 399, 439
LmnI GCTCC 3 cut(s) 166, 448, 496
Lsp1109I GCAGC 1 cut(s) 331
LweI GCATC 2 cut(s) 93, 716
MaeI CTAG 1 cut(s) 93
MaeIII GTNAC 1 cut(s) 456
MalI GATC 3 cut(s) 180, 401, 441
MboI GATC 3 cut(s) 178, 399, 439
MboII GAAGA 6 cut(s) 202, 404, 434, 542, 588, 712
MlsI TGGCCA 2 cut(s) 354, 612
MluCI AATT 4 cut(s) 137, 532, 557, 717
MluNI TGGCCA 2 cut(s) 354, 612
MlyI GAGTC 1 cut(s) 116
MmeI TCCRAC 2 cut(s) 99, 154
MnlI CCTC 7 cut(s) 145, 156, 229, 322, 390, 427, 558
Mox20I TGGCCA 2 cut(s) 354, 612
MroXI GAANNNNTTC 1 cut(s) 306
MscI TGGCCA 2 cut(s) 354, 612
MseI TTAA 4 cut(s) 26, 69, 312, 681
MslI CAYNNNNRTG 1 cut(s) 276
Msp20I TGGCCA 2 cut(s) 354, 612
MspA1I CMGCKG 1 cut(s) 713
MspI CCGG 1 cut(s) 133
MspR9I CCNGG 1 cut(s) 134
NciI CCSGG 1 cut(s) 134
NdeII GATC 3 cut(s) 178, 399, 439
NlaIII CATG 2 cut(s) 275, 676
NlaIV GGNNCC 4 cut(s) 52, 203, 450, 492
NmeAIII GCCGAG 2 cut(s) 68, 175
NmuCI GTSAC 1 cut(s) 456
NspI RCATGY 1 cut(s) 275
NspV TTCGAA 1 cut(s) 242
PagI TCATGA 1 cut(s) 672
PdmI GAANNNNTTC 1 cut(s) 306
PfeI GAWTC 1 cut(s) 676
PkrI GCNGC 1 cut(s) 346
PleI GAGTC 1 cut(s) 116
PpsI GAGTC 1 cut(s) 116
PspN4I GGNNCC 4 cut(s) 52, 203, 450, 492
PspPI GGNCC 1 cut(s) 51
PvuII CAGCTG 1 cut(s) 713
RsaI GTAC 1 cut(s) 203
RsaNI GTAC 1 cut(s) 202
RseI CAYNNNNRTG 1 cut(s) 276
SaqAI TTAA 4 cut(s) 26, 69, 312, 681
SatI GCNGC 1 cut(s) 345
Sau3AI GATC 3 cut(s) 178, 399, 439
Sau96I GGNCC 1 cut(s) 51
SchI GAGTC 1 cut(s) 116
ScrFI CCNGG 1 cut(s) 134
SfaNI GCATC 2 cut(s) 93, 716
SfuI TTCGAA 1 cut(s) 242
SmiMI CAYNNNNRTG 1 cut(s) 276
Sse9I AATT 4 cut(s) 137, 532, 557, 717
SsiI CCGC 1 cut(s) 147
SspMI CTAG 1 cut(s) 93
StyD4I CCNGG 1 cut(s) 132
TaaI ACNGT 1 cut(s) 206
TaqI TCGA 2 cut(s) 101, 242
TasI AATT 4 cut(s) 137, 532, 557, 717
TfiI GAWTC 1 cut(s) 676
Tru1I TTAA 4 cut(s) 26, 69, 312, 681
Tru9I TTAA 4 cut(s) 26, 69, 312, 681
TscAI CASTG 2 cut(s) 346, 605
TseFI GTSAC 1 cut(s) 456
TseI GCWGC 1 cut(s) 344
Tsp45I GTSAC 1 cut(s) 456
TspDTI ATGAA 3 cut(s) 661, 689, 723
TspRI CASTG 2 cut(s) 346, 605
XapI RAATTY 2 cut(s) 137, 557
XceI RCATGY 1 cut(s) 275
XmnI GAANNNNTTC 1 cut(s) 306
XspI CTAG 1 cut(s) 93
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.