pycom10g22890

BES1 BZR1 homolog protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr10
OG0006018
Physical Location & Seq
Reverse (-)
25180278 .. 25183079
2802 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom10g22890.1

Sequence Viewer

Length: 888 bp
ATGTACGGAAACTACAAGCTCCCGAAGCACTGCGACAACAACGAGGTCCTCAAGGCTCTCTGCAACGAAGCCGGCTGGACAGTCGAAGAAGACGGTACCACTTACCGAAAGGGATGCAAACCCGTGGATCGCATGGACATAATGGGGGGTTCTACCTCAGCAAGTCCATGTTCATCGTACCAGCCAAGTCCCTGTGCATCCTACAATCCGAGTCCCGGTGCTTCCTACAATCCAAGTCCTGCCTCATCTTCCTTCCCAAGTCCTGCCCGCTACCATGCAAATGAAAACGGTAATGCTGATGCGAATTCTCTGATCCCATGGCTTAAAACGCTCTCATCAGGCTCATCGTCTGCCATGTCCAAGCTCCCCCAATTCTTTGTTCAAGGGGGTTCCATAAGTGCTCCAGTCACCCCACCGCTGAGCTCCCCAACTTGTCGAACTCCTCGAACCAAGAGTGACTGGGATGAAGCAGTCGCTGGCTCAAGCTGGGCAGGGCAGCATTACCCTTTCCTGCCTTCGTCCACTCCACCAAGCCCCGGTCGCCAGGTTCTGCCTGATTCAGGATGGCTTGCTGGACTGCAAATTCCTCAGAGTGGCCCATCATCCCCAACATTCAGCCTTGTCTCGAAAAACCCTTTTAACTTGAAGGAGGCTTTGTCAGGAGCAGGGTCTCGGATGTGGACTCCCGGGCAAAGTGGAACATGTTCCCCGGTACTTGCTGCAAGCATTGATCACACTGGTGACATCCCAATGTCGGATGGGATGGCAGCGGAGTTTGCATTTGGCAGTAACACAACAGGATTAGTGAAGCCATGGGAAGGTGAGAGGATTGAGGAATGCGTATCAGATGATCTCGAACTTACGCTCGGGAGCACTCGGACTAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04075 map04075
Pfam Domains
Protein Families
BES1_N

Protein Analysis

296

Amino Acids

31.11

Weight (kDa)

5.4

Isoelectric Point (pI)

55.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BES1_N PF05687 1 - 111 3.7e-43 BES1/BZR1 plant transcription factor, N-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 95
AccB1I GGYRCC 1 cut(s) 95
AciI CCGC 3 cut(s) 268, 416, 770
AclWI GGATC 2 cut(s) 135, 307
AcsI RAATTY 2 cut(s) 304, 582
AfaI GTAC 4 cut(s) 5, 97, 179, 714
AfiI CCNNNNNNNGG 6 cut(s) 215, 536, 560, 593, 754, 818
AflIII ACRYGT 1 cut(s) 701
AgsI TTSAA 2 cut(s) 383, 646
AjnI CCWGG 1 cut(s) 543
AjuI GAANNNNNNNTTGG 2 cut(s) 363, 395
AleI CACNNNNGTG 1 cut(s) 738
AluBI AGCT 4 cut(s) 19, 364, 423, 486
AluI AGCT 4 cut(s) 19, 364, 423, 486
Alw21I GWGCWC 3 cut(s) 403, 425, 875
Alw26I GTCTC 2 cut(s) 628, 675
AlwI GGATC 2 cut(s) 135, 307
AlwNI CAGNNNCTG 2 cut(s) 476, 550
Ama87I CYCGRG 2 cut(s) 686, 866
AoxI GGCC 1 cut(s) 595
ApeKI GCWGC 3 cut(s) 496, 719, 767
ApoI RAATTY 2 cut(s) 304, 582
Asp700I GAANNNNTTC 1 cut(s) 703
Asp718I GGTACC 1 cut(s) 95
AspS9I GGNCC 2 cut(s) 46, 596
AsuC2I CCSGG 5 cut(s) 216, 537, 687, 688, 710
AsuHPI GGTGA 3 cut(s) 400, 752, 833
AvaI CYCGRG 2 cut(s) 686, 866
AvaII GGWCC 1 cut(s) 46
BanI GGYRCC 1 cut(s) 95
BanII GRGCYC 1 cut(s) 425
BbsI GAAGAC 1 cut(s) 96
Bbv12I GWGCWC 3 cut(s) 403, 425, 875
BbvCI CCTCAGC 1 cut(s) 157
BbvI GCAGC 3 cut(s) 508, 706, 779
BccI CCATC 4 cut(s) 558, 607, 752, 757
BcgI CGANNNNNNTGC 2 cut(s) 96, 130
BciT130I CCWGG 1 cut(s) 545
BclI TGATCA 1 cut(s) 730
BcnI CCSGG 5 cut(s) 216, 537, 687, 688, 710
BcoDI GTCTC 2 cut(s) 628, 675
BfaI CTAG 1 cut(s) 882
BisI GCNGC 3 cut(s) 497, 720, 768
BlpI GCTNAGC 1 cut(s) 419
BlsI GCNGC 3 cut(s) 498, 721, 769
Bme1390I CCNGG 6 cut(s) 216, 537, 545, 687, 688, 710
Bme18I GGWCC 1 cut(s) 46
BmeT110I CYCGRG 2 cut(s) 686, 866
BmgT120I GGNCC 2 cut(s) 46, 596
BmiI GGNNCC 2 cut(s) 97, 391
BmrFI CCNGG 6 cut(s) 216, 537, 545, 687, 688, 710
BmrI ACTGGG 1 cut(s) 469
BmsI GCATC 3 cut(s) 104, 206, 289
BmuI ACTGGG 1 cut(s) 469
BpiI GAAGAC 1 cut(s) 96
BpmI CTGGAG 1 cut(s) 387
Bpu10I CCTNAGC 1 cut(s) 157
Bpu1102I GCTNAGC 1 cut(s) 419
BpuEI CTTGAG 2 cut(s) 35, 466
BpuMI CCSGG 5 cut(s) 216, 537, 687, 688, 710
BsaI GGTCTC 1 cut(s) 675
BsaJI CCNNGG 6 cut(s) 123, 317, 535, 686, 708, 812
BsaXI ACNNNNNCTCC 2 cut(s) 641, 671
Bsc4I CCNNNNNNNGG 6 cut(s) 215, 536, 560, 593, 754, 818
Bse118I RCCGGY 1 cut(s) 71
Bse1I ACTGG 3 cut(s) 404, 464, 742
BseBI CCWGG 1 cut(s) 545
BseDI CCNNGG 6 cut(s) 123, 317, 535, 686, 708, 812
BseGI GGATG 9 cut(s) 119, 197, 469, 569, 602, 681, 744, 763, 768
BseLI CCNNNNNNNGG 6 cut(s) 215, 536, 560, 593, 754, 818
BseMII CTCAG 3 cut(s) 171, 410, 602
BseNI ACTGG 3 cut(s) 404, 464, 742
BseRI GAGGAG 1 cut(s) 432
BseXI GCAGC 3 cut(s) 508, 706, 779
BseYI CCCAGC 1 cut(s) 486
Bsh1285I CGRYCG 1 cut(s) 541
BshFI GGCC 1 cut(s) 597
BshNI GGYRCC 1 cut(s) 95
BsiEI CGRYCG 1 cut(s) 541
BsiHKAI GWGCWC 3 cut(s) 403, 425, 875
BsiHKCI CYCGRG 2 cut(s) 686, 866
BsiSI CCGG 5 cut(s) 72, 216, 537, 687, 710
BslFI GGGAC 2 cut(s) 174, 198
BslI CCNNNNNNNGG 6 cut(s) 215, 536, 560, 593, 754, 818
BsmAI GTCTC 2 cut(s) 628, 675
BsmFI GGGAC 2 cut(s) 174, 198
BsmI GAATGC 1 cut(s) 842
BsnI GGCC 1 cut(s) 597
Bso31I GGTCTC 1 cut(s) 675
BsoBI CYCGRG 2 cut(s) 686, 866
Bsp1286I GDGCHC 3 cut(s) 403, 425, 875
Bsp143I GATC 4 cut(s) 127, 312, 730, 850
Bsp1720I GCTNAGC 1 cut(s) 419
Bsp19I CCATGG 2 cut(s) 317, 812
BspACI CCGC 3 cut(s) 268, 416, 770
BspANI GGCC 1 cut(s) 597
BspCNI CTCAG 3 cut(s) 170, 411, 601
BspLI GGNNCC 2 cut(s) 97, 391
BspPI GGATC 2 cut(s) 135, 307
BspT107I GGYRCC 1 cut(s) 95
BspTNI GGTCTC 1 cut(s) 675
BsrFI RCCGGY 1 cut(s) 71
BsrI ACTGG 3 cut(s) 404, 464, 742
BssAI RCCGGY 1 cut(s) 71
BssECI CCNNGG 6 cut(s) 123, 317, 535, 686, 708, 812
BssMI GATC 4 cut(s) 127, 312, 730, 850
BssT1I CCWWGG 2 cut(s) 317, 812
Bst2UI CCWGG 1 cut(s) 545
Bst4CI ACNGT 3 cut(s) 82, 95, 290
BstC8I GCNNGC 5 cut(s) 73, 268, 478, 570, 724
BstDEI CTNAG 3 cut(s) 157, 419, 588
BstDSI CCRYGG 3 cut(s) 123, 317, 812
BstENI CCTNNNNNAGG 1 cut(s) 558
BstF5I GGATG 9 cut(s) 119, 197, 469, 569, 602, 681, 744, 763, 768
BstKTI GATC 4 cut(s) 130, 315, 733, 853
BstMAI GTCTC 2 cut(s) 628, 675
BstMBI GATC 4 cut(s) 127, 312, 730, 850
BstMCI CGRYCG 1 cut(s) 541
BstMWI GCNNNNNNNGC 4 cut(s) 25, 328, 540, 776
BstNI CCWGG 1 cut(s) 545
BstNSI RCATGY 1 cut(s) 705
BstSCI CCNGG 6 cut(s) 214, 535, 543, 685, 686, 708
BstV1I GCAGC 3 cut(s) 508, 706, 779
BstV2I GAAGAC 1 cut(s) 96
BsuRI GGCC 1 cut(s) 597
BtgI CCRYGG 3 cut(s) 123, 317, 812
BtsCI GGATG 9 cut(s) 119, 197, 469, 569, 602, 681, 744, 763, 768
BtsI GCAGTG 1 cut(s) 28
BtsIMutI CAGTG 2 cut(s) 28, 735
Cac8I GCNNGC 5 cut(s) 73, 268, 478, 570, 724
CaiI CAGNNNCTG 2 cut(s) 476, 550
Cfr10I RCCGGY 1 cut(s) 71
Cfr13I GGNCC 2 cut(s) 46, 596
Cfr9I CCCGGG 1 cut(s) 686
Csp6I GTAC 4 cut(s) 4, 96, 178, 713
CviAII CATG 7 cut(s) 133, 168, 275, 318, 355, 702, 813
CviQI GTAC 4 cut(s) 4, 96, 178, 713
DdeI CTNAG 3 cut(s) 157, 419, 588
DpnI GATC 4 cut(s) 129, 314, 732, 852
DpnII GATC 4 cut(s) 127, 312, 730, 850
Ecl136II GAGCTC 1 cut(s) 423
Eco130I CCWWGG 2 cut(s) 317, 812
Eco24I GRGCYC 1 cut(s) 425
Eco31I GGTCTC 1 cut(s) 675
Eco47I GGWCC 1 cut(s) 46
Eco53kI GAGCTC 1 cut(s) 423
Eco88I CYCGRG 2 cut(s) 686, 866
EcoICRI GAGCTC 1 cut(s) 423
EcoNI CCTNNNNNAGG 1 cut(s) 558
EcoO109I RGGNCCY 1 cut(s) 46
EcoRI GAATTC 1 cut(s) 304
EcoRII CCWGG 1 cut(s) 543
EcoT14I CCWWGG 2 cut(s) 317, 812
EcoT38I GRGCYC 1 cut(s) 425
ErhI CCWWGG 2 cut(s) 317, 812
FaeI CATG 7 cut(s) 136, 171, 278, 321, 358, 705, 816
FaiI YATR 9 cut(s) 134, 140, 169, 276, 319, 356, 395, 703, 814
FaqI GGGAC 2 cut(s) 174, 198
FatI CATG 7 cut(s) 132, 167, 274, 317, 354, 701, 812
FauI CCCGC 1 cut(s) 275
FbaI TGATCA 1 cut(s) 730
Fnu4HI GCNGC 3 cut(s) 497, 720, 768
FokI GGATG 9 cut(s) 126, 184, 476, 576, 589, 688, 731, 770, 775
FriOI GRGCYC 1 cut(s) 425
Fsp4HI GCNGC 3 cut(s) 497, 720, 768
FspBI CTAG 1 cut(s) 882
GluI GCNGC 3 cut(s) 497, 720, 768
GsaI CCCAGC 1 cut(s) 490
GsuI CTGGAG 1 cut(s) 387
HaeIII GGCC 1 cut(s) 597
HapII CCGG 5 cut(s) 72, 216, 537, 687, 710
Hin1II CATG 7 cut(s) 136, 171, 278, 321, 358, 705, 816
HinfI GANTC 3 cut(s) 211, 557, 682
HpaII CCGG 5 cut(s) 72, 216, 537, 687, 710
HphI GGTGA 3 cut(s) 400, 752, 833
Hpy166II GTNNAC 2 cut(s) 522, 681
Hpy188I TCNGA 7 cut(s) 210, 312, 591, 675, 757, 847, 879
Hpy188III TCNNGA 6 cut(s) 22, 561, 625, 660, 854, 868
Hpy8I GTNNAC 2 cut(s) 522, 681
HpyAV CCTTC 4 cut(s) 262, 525, 640, 812
HpyCH4III ACNGT 3 cut(s) 82, 95, 290
HpyCH4V TGCA 7 cut(s) 63, 117, 197, 278, 580, 722, 779
HpyF10VI GCNNNNNNNGC 4 cut(s) 25, 328, 540, 776
HpyF3I CTNAG 3 cut(s) 157, 419, 588
Hsp92II CATG 7 cut(s) 136, 171, 278, 321, 358, 705, 816
KpnI GGTACC 1 cut(s) 99
KroI GCCGGC 1 cut(s) 71
KroNI GCCGGC 1 cut(s) 73
Ksp22I TGATCA 1 cut(s) 730
Kzo9I GATC 4 cut(s) 127, 312, 730, 850
LmnI GCTCC 6 cut(s) 24, 369, 406, 428, 662, 870
Lsp1109I GCAGC 3 cut(s) 508, 706, 779
LweI GCATC 3 cut(s) 104, 206, 289
MaeI CTAG 1 cut(s) 882
MaeIII GTNAC 4 cut(s) 406, 455, 740, 788
MalI GATC 4 cut(s) 129, 314, 732, 852
MboI GATC 4 cut(s) 127, 312, 730, 850
MboII GAAGA 3 cut(s) 98, 101, 240
MhlI GDGCHC 3 cut(s) 403, 425, 875
MluCI AATT 3 cut(s) 304, 371, 582
MlyI GAGTC 2 cut(s) 220, 676
MmeI TCCRAC 1 cut(s) 735
MnlI CCTC 9 cut(s) 37, 59, 166, 253, 453, 597, 643, 819, 826
MroNI GCCGGC 1 cut(s) 71
MroXI GAANNNNTTC 1 cut(s) 703
MseI TTAA 2 cut(s) 324, 639
MslI CAYNNNNRTG 3 cut(s) 279, 738, 749
MspA1I CMGCKG 2 cut(s) 418, 770
MspI CCGG 5 cut(s) 72, 216, 537, 687, 710
MspR9I CCNGG 6 cut(s) 216, 537, 545, 687, 688, 710
Mva1269I GAATGC 1 cut(s) 842
MvaI CCWGG 1 cut(s) 545
MwoI GCNNNNNNNGC 4 cut(s) 25, 328, 540, 776
NaeI GCCGGC 1 cut(s) 73
NciI CCSGG 5 cut(s) 216, 537, 687, 688, 710
NcoI CCATGG 2 cut(s) 317, 812
NdeII GATC 4 cut(s) 127, 312, 730, 850
NgoMIV GCCGGC 1 cut(s) 71
NlaIII CATG 7 cut(s) 136, 171, 278, 321, 358, 705, 816
NlaIV GGNNCC 2 cut(s) 97, 391
NmuCI GTSAC 3 cut(s) 406, 455, 740
NspI RCATGY 1 cut(s) 705
OliI CACNNNNGTG 1 cut(s) 738
PciI ACATGT 1 cut(s) 701
PcsI WCGNNNNNNNCGW 1 cut(s) 442
PctI GAATGC 1 cut(s) 842
PdiI GCCGGC 1 cut(s) 73
PdmI GAANNNNTTC 1 cut(s) 703
PfeI GAWTC 1 cut(s) 557
PkrI GCNGC 3 cut(s) 498, 721, 769
PleI GAGTC 2 cut(s) 219, 676
PpsI GAGTC 2 cut(s) 219, 676
PpuMI RGGWCCY 1 cut(s) 46
PscI ACATGT 1 cut(s) 701
Psp124BI GAGCTC 1 cut(s) 425
Psp5II RGGWCCY 1 cut(s) 46
Psp6I CCWGG 1 cut(s) 543
PspFI CCCAGC 1 cut(s) 486
PspGI CCWGG 1 cut(s) 543
PspN4I GGNNCC 2 cut(s) 97, 391
PspPI GGNCC 2 cut(s) 46, 596
PspPPI RGGWCCY 1 cut(s) 46
PstNI CAGNNNCTG 2 cut(s) 476, 550
RsaI GTAC 4 cut(s) 5, 97, 179, 714
RsaNI GTAC 4 cut(s) 4, 96, 178, 713
RseI CAYNNNNRTG 3 cut(s) 279, 738, 749
SacI GAGCTC 1 cut(s) 425
SaqAI TTAA 2 cut(s) 324, 639
SatI GCNGC 3 cut(s) 497, 720, 768
Sau3AI GATC 4 cut(s) 127, 312, 730, 850
Sau96I GGNCC 2 cut(s) 46, 596
SchI GAGTC 2 cut(s) 220, 676
ScrFI CCNGG 6 cut(s) 216, 537, 545, 687, 688, 710
SduI GDGCHC 3 cut(s) 403, 425, 875
SetI ASST 9 cut(s) 21, 48, 158, 366, 425, 488, 549, 823, 887
SfaNI GCATC 3 cut(s) 104, 206, 289
SinI GGWCC 1 cut(s) 46
SmaI CCCGGG 1 cut(s) 688
SmiMI CAYNNNNRTG 3 cut(s) 279, 738, 749
SmlI CTYRAG 2 cut(s) 50, 481
SmoI CTYRAG 2 cut(s) 50, 481
Sse9I AATT 3 cut(s) 304, 371, 582
SsiI CCGC 3 cut(s) 268, 416, 770
SspMI CTAG 1 cut(s) 882
SstI GAGCTC 1 cut(s) 425
StyD4I CCNGG 6 cut(s) 214, 535, 543, 685, 686, 708
StyI CCWWGG 2 cut(s) 317, 812
TaaI ACNGT 3 cut(s) 82, 95, 290
TaqI TCGA 5 cut(s) 84, 436, 445, 626, 855
TasI AATT 3 cut(s) 304, 371, 582
TfiI GAWTC 1 cut(s) 557
Tru1I TTAA 2 cut(s) 324, 639
Tru9I TTAA 2 cut(s) 324, 639
TscAI CASTG 2 cut(s) 35, 742
TseFI GTSAC 3 cut(s) 406, 455, 740
TseI GCWGC 3 cut(s) 496, 719, 767
Tsp45I GTSAC 3 cut(s) 406, 455, 740
TspDTI ATGAA 3 cut(s) 162, 297, 480
TspGWI ACGGA 1 cut(s) 21
TspMI CCCGGG 1 cut(s) 686
TspRI CASTG 2 cut(s) 35, 742
VpaK11BI GGWCC 1 cut(s) 46
XagI CCTNNNNNAGG 1 cut(s) 558
XapI RAATTY 2 cut(s) 304, 582
XceI RCATGY 1 cut(s) 705
XmaI CCCGGG 1 cut(s) 686
XmnI GAANNNNTTC 1 cut(s) 703
XspI CTAG 1 cut(s) 882
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.