pycom111g00320

Belongs to the mitochondrial carrier (TC 2.A.29) family

Basic Information

Type: gene
Biological Identity
pyrus_communis
SuperScaffold_111
Physical Location & Seq
Forward (+)
242751 .. 245483
2733 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom111g00320.3

Sequence Viewer

Length: 1125 bp
ATGGCTCTCTCAGACAAGCAAGCGCGTAAGGCTCTGATCCCGAGCTTCCTCTATAGCTCCTCGTCCTCCATCGCGCTGGAGAAGATGCTCTACGCCAGGCCTAGCGGCGGCTTCACGCCGACTGCCACCGTCGAAGGAGTCTCCGCCAGGAAGGGCCTCGTCATTCCGTCGCCCCGCGAGCCCTTGGGGAAGATCGAGATGTACTCGCCTTCCTTCTACGCTGCCTGTACTTTTGGAGGAATTCTCAGCTGTGGTCTCACTCACACGGCCGTCACTCCCCTTGACCTCGTCAAGTGCAATATGCAGATTGATCCCGCAAAATACAAAAGCATCACATCTGGTTTTGGAGTTCTGCTCAAGGAGCAGGGGGTTAAGGGCTTTTTCAGGGGATGGGTGCCTACCCTCCTTGGTTACAGTGCTCAGGGTGCCTGCAAGTTTGGATTCTATGAATTTTTCAAGAAGTACTACTCTGACCTTGCTGGACCAGAGTTTGCTGCCAAGTACAAGACCTTGATCTACCTTGCTGGTTCTGCATCTGCTGAGGTCATTGCCGATGTTGCTCTTTGCCCCTTTGAGGCAGTCAAGGTCCGTGTGCAAACTCAGCCTGGATTTGCTAGAGGTTTGTCAGATGGACTTCCTAAGTTTGTCAGATCAGAAGGTGCTCTTGGATTGTACAAGGGTATTGTTCCACTATGGGGACGTCAAATCCCATACACCATGATGAAGTTTGCCTCCTTTGAGACTATTGTGGAGATGATCTATAAATATGCCATCCCTAGACCTAAGAGCGAGTGCTCCAAATCTTTGCAGCTTGGTATAAGTTTTGCTGGTGGATATGTGGCTGGTGTATTCTGTGCTATTGTATCTCATCCTGCTGACAATCTTGTCTCCTTCCTCAACAATGCCAAAGGAGCAACAGTTGGTGATGTGAGTGCTATGGCTGTCAAGAAGATGGGAGTGATCGGTCTCTTTACCCGTGGGCTTCCTCTTCGTATTGTCATGATTGGAACTCTTACTGGAGCTCAGTGGGGTATCTATGATGCATTCAAAGTTTTCGTCGGACTGCCAACAACTGGCGGTGCTCCCCCTCCGGTTGCTGCTGCATCCGAGCTTGCTAAGGTGTAA

Protein Analysis

375

Amino Acids

39.88

Weight (kDa)

9.46

Isoelectric Point (pI)

36.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0013856)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 884
AatII GACGTC 1 cut(s) 703
AccB1I GGYRCC 2 cut(s) 394, 425
AccB7I CCANNNNNTGG 1 cut(s) 1073
AccII CGCG 3 cut(s) 25, 74, 177
AciI CCGC 6 cut(s) 105, 108, 144, 175, 315, 1077
AclWI GGATC 2 cut(s) 31, 305
AcoI YGGCCR 1 cut(s) 267
AcsI RAATTY 2 cut(s) 240, 449
AcyI GRCGYC 1 cut(s) 700
AfaI GTAC 5 cut(s) 203, 229, 464, 503, 674
AfiI CCNNNNNNNGG 4 cut(s) 107, 574, 695, 1073
AgsI TTSAA 2 cut(s) 457, 1048
AjnI CCWGG 3 cut(s) 95, 146, 604
AjuI GAANNNNNNNTTGG 2 cut(s) 648, 680
AluBI AGCT 6 cut(s) 45, 57, 249, 811, 1022, 1111
AluI AGCT 6 cut(s) 45, 57, 249, 811, 1022, 1111
Alw21I GWGCWC 5 cut(s) 421, 664, 797, 1024, 1084
Alw26I GTCTC 5 cut(s) 145, 260, 734, 892, 971
AlwI GGATC 2 cut(s) 31, 305
Ama87I CYCGRG 1 cut(s) 40
AoxI GGCC 3 cut(s) 98, 154, 267
ApeKI GCWGC 5 cut(s) 221, 494, 808, 1097, 1100
ApoI RAATTY 2 cut(s) 240, 449
ArsI GACNNNNNNTTYG 2 cut(s) 1041, 1073
AspLEI GCGC 2 cut(s) 25, 76
AspS9I GGNCC 3 cut(s) 154, 482, 586
AsuHPI GGTGA 1 cut(s) 935
AvaI CYCGRG 1 cut(s) 40
AvaII GGWCC 2 cut(s) 482, 586
BanI GGYRCC 2 cut(s) 394, 425
BanII GRGCYC 2 cut(s) 183, 1024
BarI GAAGNNNNNNTAC 2 cut(s) 74, 106
Bbv12I GWGCWC 5 cut(s) 421, 664, 797, 1024, 1084
BbvCI CCTCAGC 1 cut(s) 540
BbvI GCAGC 5 cut(s) 208, 481, 820, 1084, 1087
BccI CCATC 5 cut(s) 77, 384, 623, 779, 946
BceAI ACGGC 2 cut(s) 254, 282
BciT130I CCWGG 3 cut(s) 97, 148, 606
BcoDI GTCTC 5 cut(s) 145, 260, 734, 892, 971
BfaI CTAG 3 cut(s) 102, 615, 777
BfmI CTRYAG 1 cut(s) 52
BisI GCNGC 7 cut(s) 106, 109, 222, 495, 809, 1098, 1101
BlsI GCNGC 7 cut(s) 107, 110, 223, 496, 810, 1099, 1102
BmcAI AGTACT 1 cut(s) 464
Bme1390I CCNGG 3 cut(s) 97, 148, 606
Bme18I GGWCC 2 cut(s) 482, 586
BmeT110I CYCGRG 1 cut(s) 40
BmgT120I GGNCC 3 cut(s) 154, 482, 586
BmiI GGNNCC 2 cut(s) 396, 427
BmrFI CCNGG 3 cut(s) 97, 148, 606
BmsI GCATC 5 cut(s) 75, 339, 542, 1030, 1112
BplI GAGNNNNNCTC 6 cut(s) 188, 220, 228, 260, 339, 371
BpmI CTGGAG 2 cut(s) 98, 1038
Bpu10I CCTNAGC 3 cut(s) 420, 540, 1116
BpuEI CTTGAG 1 cut(s) 341
BsaHI GRCGYC 1 cut(s) 700
BsaI GGTCTC 2 cut(s) 260, 971
BsaJI CCNNGG 3 cut(s) 183, 406, 976
BsaWI WCCGGW 1 cut(s) 1090
BsaXI ACNNNNNCTCC 2 cut(s) 903, 933
Bsc4I CCNNNNNNNGG 4 cut(s) 107, 574, 695, 1073
Bse1I ACTGG 2 cut(s) 1021, 1078
Bse3DI GCAATG 1 cut(s) 546
BseBI CCWGG 3 cut(s) 97, 148, 606
BseDI CCNNGG 3 cut(s) 183, 406, 976
BseGI GGATG 4 cut(s) 395, 771, 868, 1103
BseLI CCNNNNNNNGG 4 cut(s) 107, 574, 695, 1073
BseMI GCAATG 1 cut(s) 546
BseMII CTCAG 6 cut(s) 24, 259, 434, 531, 614, 1037
BseNI ACTGG 2 cut(s) 1021, 1078
BseRI GAGGAG 1 cut(s) 49
BseX3I CGGCCG 1 cut(s) 267
BseXI GCAGC 5 cut(s) 208, 481, 820, 1084, 1087
Bsh1236I CGCG 3 cut(s) 25, 74, 177
Bsh1285I CGRYCG 1 cut(s) 270
BshFI GGCC 3 cut(s) 100, 156, 269
BshNI GGYRCC 2 cut(s) 394, 425
BsiEI CGRYCG 1 cut(s) 270
BsiHKAI GWGCWC 5 cut(s) 421, 664, 797, 1024, 1084
BsiHKCI CYCGRG 1 cut(s) 40
BsiSI CCGG 1 cut(s) 1091
BslFI GGGAC 1 cut(s) 711
BslI CCNNNNNNNGG 4 cut(s) 107, 574, 695, 1073
BsmAI GTCTC 5 cut(s) 145, 260, 734, 892, 971
BsmFI GGGAC 1 cut(s) 711
BsmI GAATGC 1 cut(s) 1043
BsnI GGCC 3 cut(s) 100, 156, 269
Bso31I GGTCTC 2 cut(s) 260, 971
BsoBI CYCGRG 1 cut(s) 40
Bsp1286I GDGCHC 6 cut(s) 183, 421, 664, 797, 1024, 1084
Bsp1407I TGTACA 1 cut(s) 672
Bsp143I GATC 7 cut(s) 36, 192, 310, 513, 650, 756, 960
BspACI CCGC 6 cut(s) 105, 108, 144, 175, 315, 1077
BspANI GGCC 3 cut(s) 100, 156, 269
BspCNI CTCAG 6 cut(s) 23, 258, 433, 532, 613, 1036
BspFNI CGCG 3 cut(s) 25, 74, 177
BspHI TCATGA 1 cut(s) 999
BspLI GGNNCC 2 cut(s) 396, 427
BspPI GGATC 2 cut(s) 31, 305
BspT107I GGYRCC 2 cut(s) 394, 425
BspTNI GGTCTC 2 cut(s) 260, 971
BsrDI GCAATG 1 cut(s) 546
BsrGI TGTACA 1 cut(s) 672
BsrI ACTGG 2 cut(s) 1021, 1078
BssECI CCNNGG 3 cut(s) 183, 406, 976
BssMI GATC 7 cut(s) 36, 192, 310, 513, 650, 756, 960
BssNI GRCGYC 1 cut(s) 700
BssT1I CCWWGG 2 cut(s) 183, 406
Bst2UI CCWGG 3 cut(s) 97, 148, 606
Bst4CI ACNGT 3 cut(s) 130, 416, 919
Bst6I CTCTTC 1 cut(s) 993
BstACI GRCGYC 1 cut(s) 700
BstAUI TGTACA 1 cut(s) 672
BstC8I GCNNGC 4 cut(s) 21, 179, 430, 1113
BstDEI CTNAG 9 cut(s) 10, 245, 420, 540, 600, 639, 783, 1023, 1116
BstDSI CCRYGG 1 cut(s) 976
BstF5I GGATG 4 cut(s) 395, 771, 868, 1103
BstFNI CGCG 3 cut(s) 25, 74, 177
BstHHI GCGC 2 cut(s) 25, 76
BstKTI GATC 7 cut(s) 39, 195, 313, 516, 653, 759, 963
BstMAI GTCTC 5 cut(s) 145, 260, 734, 892, 971
BstMBI GATC 7 cut(s) 36, 192, 310, 513, 650, 756, 960
BstMCI CGRYCG 1 cut(s) 270
BstMWI GCNNNNNNNGC 8 cut(s) 29, 178, 361, 425, 530, 557, 601, 911
BstNI CCWGG 3 cut(s) 97, 148, 606
BstSCI CCNGG 3 cut(s) 95, 146, 604
BstSFI CTRYAG 1 cut(s) 52
BstUI CGCG 3 cut(s) 25, 74, 177
BstV1I GCAGC 5 cut(s) 208, 481, 820, 1084, 1087
BstXI CCANNNNNNTGG 1 cut(s) 76
BstZI CGGCCG 1 cut(s) 267
BsuRI GGCC 3 cut(s) 100, 156, 269
BtgI CCRYGG 1 cut(s) 976
BtgZI GCGATG 1 cut(s) 55
BtsCI GGATG 4 cut(s) 395, 771, 868, 1103
BtsIMutI CAGTG 2 cut(s) 421, 1031
Cac8I GCNNGC 4 cut(s) 21, 179, 430, 1113
CciI TCATGA 1 cut(s) 999
CfoI GCGC 2 cut(s) 25, 76
Cfr13I GGNCC 3 cut(s) 154, 482, 586
Csp6I GTAC 5 cut(s) 202, 228, 463, 502, 673
CviAII CATG 2 cut(s) 718, 1000
CviQI GTAC 5 cut(s) 202, 228, 463, 502, 673
DdeI CTNAG 9 cut(s) 10, 245, 420, 540, 600, 639, 783, 1023, 1116
DpnI GATC 7 cut(s) 38, 194, 312, 515, 652, 758, 962
DpnII GATC 7 cut(s) 36, 192, 310, 513, 650, 756, 960
DrdI GACNNNNNNGTC 1 cut(s) 884
DseDI GACNNNNNNGTC 1 cut(s) 884
EaeI YGGCCR 1 cut(s) 267
EagI CGGCCG 1 cut(s) 267
Eam1104I CTCTTC 1 cut(s) 993
EarI CTCTTC 1 cut(s) 993
EciI GGCGGA 1 cut(s) 133
Ecl136II GAGCTC 1 cut(s) 1022
EclXI CGGCCG 1 cut(s) 267
Eco130I CCWWGG 2 cut(s) 183, 406
Eco147I AGGCCT 1 cut(s) 100
Eco24I GRGCYC 2 cut(s) 183, 1024
Eco31I GGTCTC 2 cut(s) 260, 971
Eco47I GGWCC 2 cut(s) 482, 586
Eco52I CGGCCG 1 cut(s) 267
Eco53kI GAGCTC 1 cut(s) 1022
Eco88I CYCGRG 1 cut(s) 40
EcoICRI GAGCTC 1 cut(s) 1022
EcoO109I RGGNCCY 1 cut(s) 154
EcoRI GAATTC 1 cut(s) 240
EcoRII CCWGG 3 cut(s) 95, 146, 604
EcoT14I CCWWGG 2 cut(s) 183, 406
EcoT22I ATGCAT 1 cut(s) 1045
EcoT38I GRGCYC 2 cut(s) 183, 1024
ErhI CCWWGG 2 cut(s) 183, 406
FaeI CATG 2 cut(s) 721, 1003
FalI AAGNNNNNCTT 2 cut(s) 648, 680
FaqI GGGAC 1 cut(s) 711
FatI CATG 2 cut(s) 717, 999
FauI CCCGC 2 cut(s) 182, 322
Fnu4HI GCNGC 7 cut(s) 106, 109, 222, 495, 809, 1098, 1101
FokI GGATG 4 cut(s) 402, 758, 855, 1090
FriOI GRGCYC 2 cut(s) 183, 1024
Fsp4HI GCNGC 7 cut(s) 106, 109, 222, 495, 809, 1098, 1101
FspBI CTAG 3 cut(s) 102, 615, 777
GlaI GCGC 2 cut(s) 24, 75
GluI GCNGC 7 cut(s) 106, 109, 222, 495, 809, 1098, 1101
GsuI CTGGAG 2 cut(s) 98, 1038
HaeIII GGCC 3 cut(s) 100, 156, 269
HapII CCGG 1 cut(s) 1091
HhaI GCGC 2 cut(s) 25, 76
Hin1I GRCGYC 1 cut(s) 700
Hin1II CATG 2 cut(s) 721, 1003
Hin6I GCGC 2 cut(s) 23, 74
HinP1I GCGC 2 cut(s) 23, 74
HinfI GANTC 2 cut(s) 138, 441
HpaII CCGG 1 cut(s) 1091
HphI GGTGA 1 cut(s) 935
Hpy188I TCNGA 8 cut(s) 13, 36, 472, 628, 650, 655, 1061, 1108
Hpy188III TCNNGA 5 cut(s) 40, 196, 457, 946, 1000
Hpy99I CGWCG 3 cut(s) 134, 172, 1061
HpyAV CCTTC 6 cut(s) 128, 145, 219, 223, 650, 901
HpyCH4III ACNGT 3 cut(s) 130, 416, 919
HpyCH4IV ACGT 1 cut(s) 700
HpyCH4V TGCA 8 cut(s) 297, 304, 432, 533, 595, 808, 1043, 1103
HpyF10VI GCNNNNNNNGC 8 cut(s) 29, 178, 361, 425, 530, 557, 601, 911
HpyF3I CTNAG 9 cut(s) 10, 245, 420, 540, 600, 639, 783, 1023, 1116
HpySE526I ACGT 1 cut(s) 700
Hsp92I GRCGYC 1 cut(s) 700
Hsp92II CATG 2 cut(s) 721, 1003
HspAI GCGC 2 cut(s) 23, 74
Kzo9I GATC 7 cut(s) 36, 192, 310, 513, 650, 756, 960
LmnI GCTCC 6 cut(s) 62, 361, 800, 911, 1019, 1087
Lsp1109I GCAGC 5 cut(s) 208, 481, 820, 1084, 1087
LweI GCATC 5 cut(s) 75, 339, 542, 1030, 1112
MaeI CTAG 3 cut(s) 102, 615, 777
MaeII ACGT 1 cut(s) 700
MaeIII GTNAC 2 cut(s) 271, 410
MalI GATC 7 cut(s) 38, 194, 312, 515, 652, 758, 962
MboI GATC 7 cut(s) 36, 192, 310, 513, 650, 756, 960
MboII GAAGA 4 cut(s) 94, 202, 961, 980
MhlI GDGCHC 6 cut(s) 183, 421, 664, 797, 1024, 1084
MluCI AATT 2 cut(s) 240, 449
MlyI GAGTC 1 cut(s) 147
MmeI TCCRAC 1 cut(s) 1039
Mph1103I ATGCAT 1 cut(s) 1045
MseI TTAA 1 cut(s) 372
MslI CAYNNNNRTG 1 cut(s) 719
MspA1I CMGCKG 1 cut(s) 249
MspI CCGG 1 cut(s) 1091
MspR9I CCNGG 3 cut(s) 97, 148, 606
Mva1269I GAATGC 1 cut(s) 1043
MvaI CCWGG 3 cut(s) 97, 148, 606
MvnI CGCG 3 cut(s) 25, 74, 177
MwoI GCNNNNNNNGC 8 cut(s) 29, 178, 361, 425, 530, 557, 601, 911
NdeII GATC 7 cut(s) 36, 192, 310, 513, 650, 756, 960
NlaIII CATG 2 cut(s) 721, 1003
NlaIV GGNNCC 2 cut(s) 396, 427
NmuCI GTSAC 1 cut(s) 271
NsiI ATGCAT 1 cut(s) 1045
PagI TCATGA 1 cut(s) 999
PceI AGGCCT 1 cut(s) 100
PctI GAATGC 1 cut(s) 1043
PfeI GAWTC 1 cut(s) 441
PflFI GACNNNGTC 1 cut(s) 287
PflMI CCANNNNNTGG 1 cut(s) 1073
PkrI GCNGC 7 cut(s) 107, 110, 223, 496, 810, 1099, 1102
PleI GAGTC 1 cut(s) 146
PpsI GAGTC 1 cut(s) 146
Psp124BI GAGCTC 1 cut(s) 1024
Psp6I CCWGG 3 cut(s) 95, 146, 604
PspGI CCWGG 3 cut(s) 95, 146, 604
PspN4I GGNNCC 2 cut(s) 396, 427
PspPI GGNCC 3 cut(s) 154, 482, 586
PsyI GACNNNGTC 1 cut(s) 287
PvuII CAGCTG 1 cut(s) 249
RsaI GTAC 5 cut(s) 203, 229, 464, 503, 674
RsaNI GTAC 5 cut(s) 202, 228, 463, 502, 673
RseI CAYNNNNRTG 1 cut(s) 719
SacI GAGCTC 1 cut(s) 1024
SaqAI TTAA 1 cut(s) 372
SatI GCNGC 7 cut(s) 106, 109, 222, 495, 809, 1098, 1101
Sau3AI GATC 7 cut(s) 36, 192, 310, 513, 650, 756, 960
Sau96I GGNCC 3 cut(s) 154, 482, 586
ScaI AGTACT 1 cut(s) 464
SchI GAGTC 1 cut(s) 147
ScrFI CCNGG 3 cut(s) 97, 148, 606
SduI GDGCHC 6 cut(s) 183, 421, 664, 797, 1024, 1084
SfaNI GCATC 5 cut(s) 75, 339, 542, 1030, 1112
SfcI CTRYAG 1 cut(s) 52
SinI GGWCC 2 cut(s) 482, 586
SmiMI CAYNNNNRTG 1 cut(s) 719
SmlI CTYRAG 1 cut(s) 356
SmoI CTYRAG 1 cut(s) 356
Sse9I AATT 2 cut(s) 240, 449
SseBI AGGCCT 1 cut(s) 100
SsiI CCGC 6 cut(s) 105, 108, 144, 175, 315, 1077
SspMI CTAG 3 cut(s) 102, 615, 777
SstI GAGCTC 1 cut(s) 1024
StuI AGGCCT 1 cut(s) 100
StyD4I CCNGG 3 cut(s) 95, 146, 604
StyI CCWWGG 2 cut(s) 183, 406
TaaI ACNGT 3 cut(s) 130, 416, 919
TaiI ACGT 1 cut(s) 703
TaqI TCGA 2 cut(s) 132, 195
TaqII GACCGA 1 cut(s) 953
TasI AATT 2 cut(s) 240, 449
TatI WGTACW 5 cut(s) 201, 227, 462, 501, 672
TauI GCSGC 2 cut(s) 108, 111
TfiI GAWTC 1 cut(s) 441
Tru1I TTAA 1 cut(s) 372
Tru9I TTAA 1 cut(s) 372
TscAI CASTG 2 cut(s) 421, 1031
TseFI GTSAC 1 cut(s) 271
TseI GCWGC 5 cut(s) 221, 494, 808, 1097, 1100
Tsp45I GTSAC 1 cut(s) 271
TspDTI ATGAA 2 cut(s) 462, 737
TspGWI ACGGA 2 cut(s) 156, 578
TspRI CASTG 2 cut(s) 421, 1031
Tth111I GACNNNGTC 1 cut(s) 287
Van91I CCANNNNNTGG 1 cut(s) 1073
VpaK11BI GGWCC 2 cut(s) 482, 586
XapI RAATTY 2 cut(s) 240, 449
XspI CTAG 3 cut(s) 102, 615, 777
ZraI GACGTC 1 cut(s) 701
ZrmI AGTACT 1 cut(s) 464
Zsp2I ATGCAT 1 cut(s) 1045
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.