Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0005260

Physical Location & Seq

Genomic Coordinates Forward (+)

208899 .. 212302

Gene Structure 3404 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1797 bp

ATGACTTCAGTTGGTTCCTTGGCTGCTCCTAGCGGCCGTGTCATTGACAGGAAATTCGACAACTTGTCGTCTCGTGCTTCATTCTCTTCATTCTCTGTCTCTAGGAGGCAAAATGTGGCTATCAGGAGGACACGGTCTCCCAGGATCTGTGCCATGGCCAAGGAATTGCACTTCAACAAGGATGGCTCTGCCATCAAGAAACTACAGACTGGTGTCAACAAGCTCGCCGACCTTGTTGGGGTTACACTCGGTCCAAAGGGAAGGAATGTCGTTCTAGAGAGCAAGTATGGCTCCCCCAAAATTGTTAACGATGGTGTAACCGTTGCAAAAGAGGTTGAGTTGGAGGACCCTGTTGAGAACATTGGGGCTAAGTTAGTGAGACAGGCAGCTGCCAAGACTAATGACCTAGCTGGTGATGGTACAACCACTTCTGTTGTCCTTGCACAAGGTCTTATTGCTGAAGGTGTCAAGGTGGTTGCAGCTGGGGCAAACCCGGTTTTAATCACACGTGGCATTGAAAAGACCACCAGAGCTCTAGTAAATGAGCTTAAGTTGATCTCCAAAGAGGTTGAAGACAATGAACTGGCAGATGTGGCAGCTGTTAGTGCAGGAAACAACTATGAAGTAGGAAACATGATTGCCGAAGCTTTGAGCAAGGTGGGTAGGAAAGGTGTGGTGACCCTTGAAGAGGGAAAGAGCGCTGAGAACAGCCTATACGTTGTTGAAGGAATGCAATTCGATCGTGGTTATATCTCACCTTACTTTGTCACTGACAGCGAGAAAATGGCAGTTGAATATGAGAACTGCAAGTTGCTTCTTGTTGATAAAAAAATTACAAATGCAAGGGACCTTGTTAACATTTTGGAGGATGCTATTAGAGGAGGATACCCAGTTGTAATCATTGCAGAAGACATTGAACAAGAAGCTCTCGCAACTCTTGTTGTAAACAAGCTAAGAGGAGCCCTTAAGATTGCTGCCCTTAAAGCTCCCGGGTTTGGTGATCGCAAGAGCCAGTACCTTGATGATATTGCTATTCTAACTGGAGGAACTGTTATCAGAGAGGAGGTAGGACTCACATTAGAGAATGCTGGAAAGGAGGTCCTTGGCCATGCTTCGAAAGTGGTTCTTACAAAGGATAGCTCCACAATTGTTGGTGATGGAAGTACCCAGGAAGCAGTTAACAAGCGAGTTGCCCAAATTAAGAACCTCATTGAGGCGGCAGAGCAGGACTATGAAAGAGAAAAGCTAAATGAAAGGATTGCAAAACTATCTGGTGGTGTTGCTGTTATACAGGTTGGAGCACAAACTGAGACAGAGCTGAAAGAAAAGAAACTGAGGGTCGAAGATGCTCTGAATGCAACGAAGGCAGCTGTTGAGGAAGGTATTGTTGTTGGAGGTGGATGCACACTTCTGAGGTTAGCATCGAAGGTTGACGCAATCAAAGATACTCTTGATAATGATGAAGAAAAGGTTGGAGCAGATATTGTTAGAAGAGCTCTTAGTTACCCTCTGAAATTAATTGCCAAGAATGCTGGTGTAAATGGAAGTGTTGTCAGTGAGAAGGTGCTTTCAAATGACAATCCCAAGTATGGATACAATGCTGCCACGGGAAACTATGAAGATTTAATGGCTGCTGGAATCATTGATCCAACCAAGGTGGTGAGATGTTGCCTGGAGCATGCATCCTCTGTTGCGAAAACTTTCTTAATGTCAGACTGTGTAGTTGTTGAGATTAAAGAGCCAGAACCAGCAGTGCCCGCTGGCAACCCCATGGACAACTCAGGCTACGGTTACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005739 GO:0005829 GO:0005840 GO:0006457 GO:0006458 GO:0006996 GO:0007005 GO:0008150 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009941 GO:0009987 GO:0016020 GO:0016043 GO:0022626 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032991 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044183 GO:0044422 GO:0044424 GO:0044428 GO:0044434 GO:0044435 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0051082 GO:0061077 GO:0070013 GO:0071840 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03018 ko04212 ko04940 ko05134 ko05152 map03018 map04212 map04940 map05134 map05152

Pfam Domains

Protein Families

Cpn60_TCP1

Protein Analysis

599

Amino Acids

63.71

Weight (kDa)

5.62

Isoelectric Point (pI)

28.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cpn60_TCP1	PF00118	75 - 577	2.1e-84	TCP-1/cpn60 chaperonin family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005260)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55490 AT1G55490 AT1G55490 AT1G55490 AT1G55490 AT3G13470 AT5G56500 AT5G56500
fragaria_vesca	FvH4_3g45800 FvH4_3g45800 FvH4_3g45800 FvH4_3g45800
malus_domestica	MD03G1002900.v1.1 MD11G1002700.v1.1
prunus_persica	Prupe.6G002500_v2.0.a1 Prupe.6G002500_v2.0.a1
pyrus_communis	pycom03g00280 pycom11g00250
rosa_chinensis	RchiOBHm_Chr5g0083881
rosa_laevigata	RLG00000037061
rosa_multiflora	Rmu_sc0001287.1_g000043
rosa_roxburghii	Rroxscaffold_1G00000710
rosa_rugosa	Rorug05G0487100 Rorug05G0487200
rosa_samantha	Rh5AG540000 Rh5BG565200 Rh5CG587000 Rh5DG573600
rosa_wichuraiana	Rw5G050210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	3 cut(s)	33, 1217, 1758
AclWI	GGATC	2 cut(s)	152, 1640
AcoI	YGGCCR	3 cut(s)	34, 156, 1105
AcsI	RAATTY	1 cut(s)	53
AcuI	CTGAAG	1 cut(s)	480
AcvI	CACGTG	1 cut(s)	509
AfaI	GTAC	3 cut(s)	421, 1016, 1165
AfeI	AGCGCT	1 cut(s)	700
AfiI	CCNNNNNNNGG	5 cut(s)	238, 688, 995, 1213, 1589
AflII	CTTAAG	2 cut(s)	548, 965
AflIII	ACRYGT	1 cut(s)	506
AgsI	TTSAA	8 cut(s)	175, 518, 572, 686, 725, 794, 917, 1572
AhdI	GACNNNNNGTC	1 cut(s)	64
AjnI	CCWGG	3 cut(s)	140, 1167, 1671
AjuI	GAANNNNNNNTTGG	2 cut(s)	1455, 1487
Alw21I	GWGCWC	3 cut(s)	535, 1303, 1498
Alw26I	GTCTC	5 cut(s)	75, 103, 141, 373, 1304
AlwI	GGATC	2 cut(s)	152, 1640
AlwNI	CAGNNNCTG	1 cut(s)	147
Ama87I	CYCGRG	1 cut(s)	989
Aor51HI	AGCGCT	1 cut(s)	700
AoxI	GGCC	3 cut(s)	34, 156, 1105
ApeKI	GCWGC	9 cut(s)	23, 386, 389, 479, 596, 974, 1367, 1601, 1631
ApoI	RAATTY	1 cut(s)	53
ArsI	GACNNNNNNTTYG	2 cut(s)	38, 70
AseI	ATTAAT	1 cut(s)	1517
Asp700I	GAANNNNTTC	1 cut(s)	1700
AspLEI	GCGC	1 cut(s)	701
AspS9I	GGNCC	4 cut(s)	251, 346, 847, 1099
AsuC2I	CCSGG	3 cut(s)	494, 990, 991
AsuHPI	GGTGA	6 cut(s)	425, 688, 747, 1010, 1166, 1672
AsuII	TTCGAA	1 cut(s)	1115
AvaI	CYCGRG	1 cut(s)	989
AvaII	GGWCC	4 cut(s)	251, 346, 847, 1099
BaeGI	GKGCMC	1 cut(s)	1758
BalI	TGGCCA	2 cut(s)	158, 1107
BanII	GRGCYC	3 cut(s)	535, 964, 1498
BarI	GAAGNNNNNNTAC	2 cut(s)	412, 444
BauI	CACGAG	1 cut(s)	72
BbrPI	CACGTG	1 cut(s)	509
BbsI	GAAGAC	2 cut(s)	579, 915
Bbv12I	GWGCWC	3 cut(s)	535, 1303, 1498
BbvI	GCAGC	9 cut(s)	10, 376, 398, 491, 608, 961, 1379, 1588, 1618
BccI	CCATC	5 cut(s)	176, 200, 305, 410, 1151
BceAI	ACGGC	1 cut(s)	21
BcgI	CGANNNNNNTGC	2 cut(s)	722, 756
BciT130I	CCWGG	3 cut(s)	142, 1169, 1673
BciVI	GTATCC	2 cut(s)	878, 1586
BcnI	CCSGG	3 cut(s)	494, 990, 991
BcoDI	GTCTC	5 cut(s)	75, 103, 141, 373, 1304
BfaI	CTAG	5 cut(s)	30, 102, 275, 407, 536
BfmI	CTRYAG	1 cut(s)	203
BfoI	RGCGCY	1 cut(s)	702
BfrI	CTTAAG	2 cut(s)	548, 965
BfuI	GTATCC	2 cut(s)	878, 1586
Bme1390I	CCNGG	6 cut(s)	142, 494, 990, 991, 1169, 1673
Bme18I	GGWCC	4 cut(s)	251, 346, 847, 1099
BmeRI	GACNNNNNGTC	1 cut(s)	64
BmeT110I	CYCGRG	1 cut(s)	989
BmgT120I	GGNCC	4 cut(s)	251, 346, 847, 1099
BmiI	GGNNCC	5 cut(s)	16, 292, 348, 848, 961
BmrFI	CCNGG	6 cut(s)	142, 494, 990, 991, 1169, 1673
BmrI	ACTGGG	1 cut(s)	884
BmsI	GCATC	5 cut(s)	859, 1336, 1391, 1430, 1691
BmuI	ACTGGG	1 cut(s)	884
BoxI	GACNNNNGTC	1 cut(s)	212
BpiI	GAAGAC	2 cut(s)	579, 915
BpmI	CTGGAG	2 cut(s)	1062, 1694
Bpu14I	TTCGAA	1 cut(s)	1115
BpuMI	CCSGG	3 cut(s)	494, 990, 991
BsaAI	YACGTR	1 cut(s)	509
BsaI	GGTCTC	1 cut(s)	141
BsaXI	ACNNNNNCTCC	4 cut(s)	121, 151, 1035, 1065
Bsc4I	CCNNNNNNNGG	5 cut(s)	238, 688, 995, 1213, 1589
Bse1I	ACTGG	5 cut(s)	214, 588, 890, 1012, 1045
Bse3DI	GCAATG	1 cut(s)	900
BseBI	CCWGG	3 cut(s)	142, 1169, 1673
BseGI	GGATG	4 cut(s)	187, 874, 1406, 1682
BseLI	CCNNNNNNNGG	5 cut(s)	238, 688, 995, 1213, 1589
BseMI	GCAATG	1 cut(s)	900
BseMII	CTCAG	5 cut(s)	693, 1299, 1325, 1403, 1794
BseNI	ACTGG	5 cut(s)	214, 588, 890, 1012, 1045
BseRI	GAGGAG	3 cut(s)	894, 972, 1076
BseSI	GKGCMC	1 cut(s)	1758
BseX3I	CGGCCG	1 cut(s)	34
BseXI	GCAGC	9 cut(s)	10, 376, 398, 491, 608, 961, 1379, 1588, 1618
BseYI	CCCAGC	1 cut(s)	482
BsgI	GTGCAG	1 cut(s)	627
Bsh1285I	CGRYCG	2 cut(s)	37, 742
BshFI	GGCC	3 cut(s)	36, 158, 1107
BsiEI	CGRYCG	2 cut(s)	37, 742
BsiHKAI	GWGCWC	3 cut(s)	535, 1303, 1498
BsiHKCI	CYCGRG	1 cut(s)	989
BsiSI	CCGG	2 cut(s)	494, 990
BslFI	GGGAC	1 cut(s)	860
BslI	CCNNNNNNNGG	5 cut(s)	238, 688, 995, 1213, 1589
BsmAI	GTCTC	5 cut(s)	75, 103, 141, 373, 1304
BsmBI	CGTCTC	1 cut(s)	75
BsmFI	GGGAC	1 cut(s)	860
BsmI	GAATGC	4 cut(s)	735, 1090, 1360, 1534
BsnI	GGCC	3 cut(s)	36, 158, 1107
Bso31I	GGTCTC	1 cut(s)	141
BsoBI	CYCGRG	1 cut(s)	989
Bsp119I	TTCGAA	1 cut(s)	1115
Bsp1286I	GDGCHC	5 cut(s)	535, 964, 1303, 1498, 1758
Bsp143I	GATC	5 cut(s)	144, 555, 739, 1000, 1645
Bsp19I	CCATGG	2 cut(s)	153, 1770
BspACI	CCGC	3 cut(s)	33, 1217, 1758
BspANI	GGCC	3 cut(s)	36, 158, 1107
BspCNI	CTCAG	5 cut(s)	694, 1300, 1326, 1404, 1793
BspLI	GGNNCC	5 cut(s)	16, 292, 348, 848, 961
BspPI	GGATC	2 cut(s)	152, 1640
BspQI	GCTCTTC	1 cut(s)	1486
BspT104I	TTCGAA	1 cut(s)	1115
BspTI	CTTAAG	2 cut(s)	548, 965
BspTNI	GGTCTC	1 cut(s)	141
BsrDI	GCAATG	1 cut(s)	900
BsrI	ACTGG	5 cut(s)	214, 588, 890, 1012, 1045
BssMI	GATC	5 cut(s)	144, 555, 739, 1000, 1645
BssSI	CACGAG	1 cut(s)	72
BssT1I	CCWWGG	6 cut(s)	18, 153, 159, 1102, 1653, 1770
Bst2BI	CACGAG	1 cut(s)	72
Bst2UI	CCWGG	3 cut(s)	142, 1169, 1673
Bst4CI	ACNGT	5 cut(s)	135, 322, 1051, 1718, 1790
Bst6I	CTCTTC	3 cut(s)	91, 681, 1486
BstAFI	CTTAAG	2 cut(s)	548, 965
BstBAI	YACGTR	1 cut(s)	509
BstBI	TTCGAA	1 cut(s)	1115
BstC8I	GCNNGC	4 cut(s)	225, 1680, 1758, 1762
BstDEI	CTNAG	8 cut(s)	369, 702, 953, 1308, 1334, 1412, 1499, 1780
BstDSI	CCRYGG	3 cut(s)	153, 1605, 1770
BstEII	GGTNACC	1 cut(s)	676
BstENI	CCTNNNNNAGG	2 cut(s)	686, 1211
BstF5I	GGATG	4 cut(s)	187, 874, 1406, 1682
BstH2I	RGCGCY	1 cut(s)	702
BstHHI	GCGC	1 cut(s)	701
BstKTI	GATC	5 cut(s)	147, 558, 742, 1003, 1648
BstMAI	GTCTC	5 cut(s)	75, 103, 141, 373, 1304
BstMBI	GATC	5 cut(s)	144, 555, 739, 1000, 1645
BstMCI	CGRYCG	2 cut(s)	37, 742
BstMWI	GCNNNNNNNGC	9 cut(s)	288, 485, 593, 605, 983, 1355, 1364, 1529, 1757
BstNI	CCWGG	3 cut(s)	142, 1169, 1673
BstNSI	RCATGY	1 cut(s)	1682
BstPAI	GACNNNNGTC	1 cut(s)	212
BstPI	GGTNACC	1 cut(s)	676
BstSCI	CCNGG	6 cut(s)	140, 492, 988, 989, 1167, 1671
BstSFI	CTRYAG	1 cut(s)	203
BstSLI	GKGCMC	1 cut(s)	1758
BstV1I	GCAGC	9 cut(s)	10, 376, 398, 491, 608, 961, 1379, 1588, 1618
BstV2I	GAAGAC	2 cut(s)	579, 915
BstX2I	RGATCY	1 cut(s)	144
BstYI	RGATCY	1 cut(s)	144
BstZI	CGGCCG	1 cut(s)	34
BsuI	GTATCC	2 cut(s)	878, 1586
BsuRI	GGCC	3 cut(s)	36, 158, 1107
BtgI	CCRYGG	3 cut(s)	153, 1605, 1770
BtsCI	GGATG	4 cut(s)	187, 874, 1406, 1682
BtsI	GCAGTG	1 cut(s)	1758
BtsIMutI	CAGTG	3 cut(s)	768, 1561, 1758
Cac8I	GCNNGC	4 cut(s)	225, 1680, 1758, 1762
CaiI	CAGNNNCTG	1 cut(s)	147
CfoI	GCGC	1 cut(s)	701
Cfr13I	GGNCC	4 cut(s)	251, 346, 847, 1099
Cfr9I	CCCGGG	1 cut(s)	989
CseI	GACGC	1 cut(s)	1442
Csp6I	GTAC	3 cut(s)	420, 1015, 1164
CspCI	CAANNNNNGTGG	6 cut(s)	415, 450, 1132, 1167, 1638, 1673
CviAII	CATG	5 cut(s)	154, 634, 1109, 1679, 1771
CviQI	GTAC	3 cut(s)	420, 1015, 1164
DdeI	CTNAG	8 cut(s)	369, 702, 953, 1308, 1334, 1412, 1499, 1780
DpnI	GATC	5 cut(s)	146, 557, 741, 1002, 1647
DpnII	GATC	5 cut(s)	144, 555, 739, 1000, 1645
DriI	GACNNNNNGTC	1 cut(s)	64
EaeI	YGGCCR	3 cut(s)	34, 156, 1105
EagI	CGGCCG	1 cut(s)	34
Eam1104I	CTCTTC	3 cut(s)	91, 681, 1486
Eam1105I	GACNNNNNGTC	1 cut(s)	64
EarI	CTCTTC	3 cut(s)	91, 681, 1486
Ecl136II	GAGCTC	2 cut(s)	533, 1496
EclXI	CGGCCG	1 cut(s)	34
Eco130I	CCWWGG	6 cut(s)	18, 153, 159, 1102, 1653, 1770
Eco24I	GRGCYC	3 cut(s)	535, 964, 1498
Eco31I	GGTCTC	1 cut(s)	141
Eco47I	GGWCC	4 cut(s)	251, 346, 847, 1099
Eco47III	AGCGCT	1 cut(s)	700
Eco52I	CGGCCG	1 cut(s)	34
Eco53kI	GAGCTC	2 cut(s)	533, 1496
Eco57I	CTGAAG	1 cut(s)	480
Eco72I	CACGTG	1 cut(s)	509
Eco88I	CYCGRG	1 cut(s)	989
Eco91I	GGTNACC	1 cut(s)	676
EcoICRI	GAGCTC	2 cut(s)	533, 1496
EcoNI	CCTNNNNNAGG	2 cut(s)	686, 1211
EcoO109I	RGGNCCY	3 cut(s)	346, 847, 1099
EcoO65I	GGTNACC	1 cut(s)	676
EcoRII	CCWGG	3 cut(s)	140, 1167, 1671
EcoT14I	CCWWGG	6 cut(s)	18, 153, 159, 1102, 1653, 1770
EcoT22I	ATGCAT	1 cut(s)	1684
EcoT38I	GRGCYC	3 cut(s)	535, 964, 1498
ErhI	CCWWGG	6 cut(s)	18, 153, 159, 1102, 1653, 1770
Esp3I	CGTCTC	1 cut(s)	75
FaeI	CATG	5 cut(s)	157, 637, 1112, 1682, 1774
FalI	AAGNNNNNCTT	4 cut(s)	1110, 1142, 1434, 1466
FaqI	GGGAC	1 cut(s)	860
FatI	CATG	5 cut(s)	153, 633, 1108, 1678, 1770
FauI	CCCGC	1 cut(s)	1765
FokI	GGATG	4 cut(s)	194, 881, 1413, 1669
FriOI	GRGCYC	3 cut(s)	535, 964, 1498
FspBI	CTAG	5 cut(s)	30, 102, 275, 407, 536
GlaI	GCGC	1 cut(s)	700
GsaI	CCCAGC	1 cut(s)	486
GsuI	CTGGAG	2 cut(s)	1062, 1694
HaeII	RGCGCY	1 cut(s)	702
HaeIII	GGCC	3 cut(s)	36, 158, 1107
HapII	CCGG	2 cut(s)	494, 990
HgaI	GACGC	1 cut(s)	1442
HhaI	GCGC	1 cut(s)	701
Hin1II	CATG	5 cut(s)	157, 637, 1112, 1682, 1774
Hin6I	GCGC	1 cut(s)	699
HinP1I	GCGC	1 cut(s)	699
HincII	GTYRAC	5 cut(s)	217, 307, 856, 1180, 1432
HindII	GTYRAC	5 cut(s)	217, 307, 856, 1180, 1432
HindIII	AAGCTT	1 cut(s)	645
HinfI	GANTC	2 cut(s)	1071, 1638
HpaI	GTTAAC	3 cut(s)	307, 856, 1180
HpaII	CCGG	2 cut(s)	494, 990
HphI	GGTGA	6 cut(s)	425, 688, 747, 1010, 1166, 1672
Hpy166II	GTNNAC	6 cut(s)	217, 307, 856, 946, 1180, 1432
Hpy188I	TCNGA	5 cut(s)	1058, 1353, 1413, 1512, 1714
Hpy188III	TCNNGA	4 cut(s)	124, 196, 275, 1451
Hpy8I	GTNNAC	6 cut(s)	217, 307, 856, 946, 1180, 1432
HpyAV	CCTTC	7 cut(s)	255, 455, 719, 1357, 1373, 1420, 1555
HpyCH4III	ACNGT	5 cut(s)	135, 322, 1051, 1718, 1790
HpyCH4IV	ACGT	2 cut(s)	508, 717
HpyF10VI	GCNNNNNNNGC	9 cut(s)	288, 485, 593, 605, 983, 1355, 1364, 1529, 1757
HpyF3I	CTNAG	8 cut(s)	369, 702, 953, 1308, 1334, 1412, 1499, 1780
HpySE526I	ACGT	2 cut(s)	508, 717
Hsp92II	CATG	5 cut(s)	157, 637, 1112, 1682, 1774
HspAI	GCGC	1 cut(s)	699
KspAI	GTTAAC	3 cut(s)	307, 856, 1180
Kzo9I	GATC	5 cut(s)	144, 555, 739, 1000, 1645
LguI	GCTCTTC	1 cut(s)	1486
LmnI	GCTCC	8 cut(s)	31, 296, 959, 991, 1145, 1298, 1475, 1675
Lsp1109I	GCAGC	9 cut(s)	10, 376, 398, 491, 608, 961, 1379, 1588, 1618
LweI	GCATC	5 cut(s)	859, 1336, 1391, 1430, 1691
MaeI	CTAG	5 cut(s)	30, 102, 275, 407, 536
MaeII	ACGT	2 cut(s)	508, 717
MaeIII	GTNAC	6 cut(s)	241, 316, 676, 766, 1502, 1790
MalI	GATC	5 cut(s)	146, 557, 741, 1002, 1647
MboI	GATC	5 cut(s)	144, 555, 739, 1000, 1645
MboII	GAAGA	8 cut(s)	78, 584, 698, 920, 1355, 1475, 1503, 1631
MfeI	CAATTG	1 cut(s)	1146
MflI	RGATCY	1 cut(s)	144
MhlI	GDGCHC	5 cut(s)	535, 964, 1303, 1498, 1758
MlsI	TGGCCA	2 cut(s)	158, 1107
MluCI	AATT	9 cut(s)	53, 164, 300, 734, 831, 1146, 1197, 1514, 1518
MluNI	TGGCCA	2 cut(s)	158, 1107
MlyI	GAGTC	1 cut(s)	1065
MmeI	TCCRAC	5 cut(s)	321, 1276, 1372, 1453, 1673
Mox20I	TGGCCA	2 cut(s)	158, 1107
Mph1103I	ATGCAT	1 cut(s)	1684
MroXI	GAANNNNTTC	1 cut(s)	1700
MscI	TGGCCA	2 cut(s)	158, 1107
Msp20I	TGGCCA	2 cut(s)	158, 1107
MspA1I	CMGCKG	5 cut(s)	389, 482, 599, 1370, 1760
MspCI	CTTAAG	2 cut(s)	548, 965
MspI	CCGG	2 cut(s)	494, 990
MspR9I	CCNGG	6 cut(s)	142, 494, 990, 991, 1169, 1673
MunI	CAATTG	1 cut(s)	1146
Mva1269I	GAATGC	4 cut(s)	735, 1090, 1360, 1534
MvaI	CCWGG	3 cut(s)	142, 1169, 1673
MwoI	GCNNNNNNNGC	9 cut(s)	288, 485, 593, 605, 983, 1355, 1364, 1529, 1757
NciI	CCSGG	3 cut(s)	494, 990, 991
NcoI	CCATGG	2 cut(s)	153, 1770
NdeII	GATC	5 cut(s)	144, 555, 739, 1000, 1645
NlaIII	CATG	5 cut(s)	157, 637, 1112, 1682, 1774
NlaIV	GGNNCC	5 cut(s)	16, 292, 348, 848, 961
NmuCI	GTSAC	2 cut(s)	676, 766
NsiI	ATGCAT	1 cut(s)	1684
NspI	RCATGY	1 cut(s)	1682
NspV	TTCGAA	1 cut(s)	1115
PaeI	GCATGC	1 cut(s)	1682
PciSI	GCTCTTC	1 cut(s)	1486
PctI	GAATGC	4 cut(s)	735, 1090, 1360, 1534
PdmI	GAANNNNTTC	1 cut(s)	1700
PfeI	GAWTC	1 cut(s)	1638
PflFI	GACNNNGTC	1 cut(s)	133
Ple19I	CGATCG	1 cut(s)	742
PleI	GAGTC	1 cut(s)	1065
PmaCI	CACGTG	1 cut(s)	509
PmlI	CACGTG	1 cut(s)	509
PpsI	GAGTC	1 cut(s)	1065
Ppu21I	YACGTR	1 cut(s)	509
PpuMI	RGGWCCY	3 cut(s)	346, 847, 1099
PshAI	GACNNNNGTC	1 cut(s)	212
PshBI	ATTAAT	1 cut(s)	1517
Psp124BI	GAGCTC	2 cut(s)	535, 1498
Psp5II	RGGWCCY	3 cut(s)	346, 847, 1099
Psp6I	CCWGG	3 cut(s)	140, 1167, 1671
PspCI	CACGTG	1 cut(s)	509
PspEI	GGTNACC	1 cut(s)	676
PspFI	CCCAGC	1 cut(s)	482
PspGI	CCWGG	3 cut(s)	140, 1167, 1671
PspN4I	GGNNCC	5 cut(s)	16, 292, 348, 848, 961
PspPI	GGNCC	4 cut(s)	251, 346, 847, 1099
PspPPI	RGGWCCY	3 cut(s)	346, 847, 1099
PsrI	GAACNNNNNNTAC	2 cut(s)	698, 730
PstNI	CAGNNNCTG	1 cut(s)	147
PsuI	RGATCY	1 cut(s)	144
PsyI	GACNNNGTC	1 cut(s)	133
PvuI	CGATCG	1 cut(s)	742
PvuII	CAGCTG	4 cut(s)	389, 482, 599, 1370
RsaI	GTAC	3 cut(s)	421, 1016, 1165
RsaNI	GTAC	3 cut(s)	420, 1015, 1164
SacI	GAGCTC	2 cut(s)	535, 1498
SapI	GCTCTTC	1 cut(s)	1486
Sau3AI	GATC	5 cut(s)	144, 555, 739, 1000, 1645
Sau96I	GGNCC	4 cut(s)	251, 346, 847, 1099
SchI	GAGTC	1 cut(s)	1065
ScrFI	CCNGG	6 cut(s)	142, 494, 990, 991, 1169, 1673
SduI	GDGCHC	5 cut(s)	535, 964, 1303, 1498, 1758
SfaNI	GCATC	5 cut(s)	859, 1336, 1391, 1430, 1691
SfcI	CTRYAG	1 cut(s)	203
SfuI	TTCGAA	1 cut(s)	1115
SinI	GGWCC	4 cut(s)	251, 346, 847, 1099
SmaI	CCCGGG	1 cut(s)	991
SmlI	CTYRAG	2 cut(s)	548, 965
SmoI	CTYRAG	2 cut(s)	548, 965
SphI	GCATGC	1 cut(s)	1682
Sse9I	AATT	9 cut(s)	53, 164, 300, 734, 831, 1146, 1197, 1514, 1518
SsiI	CCGC	3 cut(s)	33, 1217, 1758
SspMI	CTAG	5 cut(s)	30, 102, 275, 407, 536
SstI	GAGCTC	2 cut(s)	535, 1498
StyD4I	CCNGG	6 cut(s)	140, 492, 988, 989, 1167, 1671
StyI	CCWWGG	6 cut(s)	18, 153, 159, 1102, 1653, 1770
TaaI	ACNGT	5 cut(s)	135, 322, 1051, 1718, 1790
TaiI	ACGT	2 cut(s)	511, 720
TaqI	TCGA	5 cut(s)	57, 738, 1115, 1341, 1424
TaqII	GACCGA	1 cut(s)	239
TasI	AATT	9 cut(s)	53, 164, 300, 734, 831, 1146, 1197, 1514, 1518
TauI	GCSGC	2 cut(s)	36, 1220
TfiI	GAWTC	1 cut(s)	1638
TscAI	CASTG	3 cut(s)	775, 1561, 1758
TseFI	GTSAC	2 cut(s)	676, 766
TseI	GCWGC	9 cut(s)	23, 386, 389, 479, 596, 974, 1367, 1601, 1631
Tsp45I	GTSAC	2 cut(s)	676, 766
TspDTI	ATGAA	8 cut(s)	69, 78, 594, 636, 1248, 1266, 1476, 1632
TspMI	CCCGGG	1 cut(s)	989
TspRI	CASTG	3 cut(s)	775, 1561, 1758
Tth111I	GACNNNGTC	1 cut(s)	133
Vha464I	CTTAAG	2 cut(s)	548, 965
VpaK11BI	GGWCC	4 cut(s)	251, 346, 847, 1099
VspI	ATTAAT	1 cut(s)	1517
XagI	CCTNNNNNAGG	2 cut(s)	686, 1211
XapI	RAATTY	1 cut(s)	53
XbaI	TCTAGA	1 cut(s)	274
XceI	RCATGY	1 cut(s)	1682
XmaI	CCCGGG	1 cut(s)	989
XmnI	GAANNNNTTC	1 cut(s)	1700
XspI	CTAG	5 cut(s)	30, 102, 275, 407, 536
Zsp2I	ATGCAT	1 cut(s)	1684

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.