pycom11g00580

Belongs to the glycosyl hydrolase 17 family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Forward (+)
437783 .. 440534
2752 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g00580.2

Sequence Viewer

Length: 1482 bp
ATGATGCGTGAAAAATGGATTGGAGGCGTGCTTCTCCTTCTAGTTGGCATGTTTACCAATGTACTAGGTGCATTCATAGGGATAAACATTGGGACCGATGTTTCGGACCTTCCATCTGAGACAGATACAATAGCACTCCTTAAAGCCCATCAAATTACACATGTGCGCCTCTACAATGCTGATGCTCACATGCTGAAAGCCCTTTCAAACAGCGGAATTGAAGTAATGGTAGGTGTCACAAATGAGGAAGTCCTAAGTGTTGGAGAGTCTTCATCAGCAGCAGCTGCCTGGATTAACAAAAATGTTGCTGCTTATTTGCCCTCAACCAATATTACCGCCATTGCTGTTGGCAGTGAGGTCATTACCTCAATTCCTCATGCTGCGCCAGTTTTGGTCGATGCTATGAACTACCTTCATAAAGCCTTAGTTGCTTCAAACCTAAATTTTCAGGTCAAAATTTCAACTCCACAATCCATGGATATAATCCCAAAGCCTTTTCCCCCGTCCACTGCCACCTTTAATTACTCATGGGGACACACCATTTACCAAATCCTTCAGTTTATTAAAAACACAAATTCCTATTACATGCTAAATGCGTATCCTTATTATGGTTACACCAATGGGGATGGAATTTTCCCGCTTGATTATGCTCTTTTCCGCCCACTTCCCTCTGTCAAGCAGATTGTTGACCCGAACACTCTTTTCCACTATAACAGCATGTTTGATGCTATGGTGGACGCCACCTATTATTCTATAGAGGATTTCAATTTCTCTGGGATCTCTGTTGTTGTCACCGAGACTGGTTGGCCATGGTTTGGTGGATCCAAAGAGCCCGATGCCAACACAGGAAATGCTCAGACCTACACCAATAATTTGATTCGACGAGTTTTAAATGATTCAGGTCCGCCCAGCCAGCCAAAGTTGCCCATCAACACGTACATTTATGAGTTGTTCAACGAAGACAAGAGGCCAGGGCCAGTGTCAGAGAAAAACTGGGGTGTGCTATATACGAATGGGTCTGCTGTGTATCCTTTAAGTTTGAGTTCCAGTCAAATTACTGTGAATTCTTCAGGGGTTTTCTGCATGGCGAAAGCTAATGTAGATCCAGATAAGTTGCAGGATGGCATAAACTGGGCTTGTGGGCAAGGTGGGGCTAACTGCACTCCCATTCAACGAGGGCAGCGGTGTTATCTCCCCGATACTATTGTAAATCATGCTTCATATGCTTATAATGACTATTATCAAAAGATGAAAAGTGCTGGCGGAACATGTGACTTTGATGACACCGCCATAATATCTACTGTTGATCCAAGCTATGGCGCGTGTAAATTTTCCGGAAGTTCTAATTCAAGCAAATTTGCGGGACTCACACCAGCGTCAGTTGCACCTTCAACCGCTGTTGGAGGCTGGAGTTCGAATCTACAAGTTTCCAATCTTCAATATCTCATGCCGGCTGCATTTCTTACATTGCTGTTGCTTTGA

Protein Analysis

494

Amino Acids

53.53

Weight (kDa)

5.24

Isoelectric Point (pI)

34.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1230
AccB7I CCANNNNNTGG 2 cut(s) 815, 1316
AccII CGCG 1 cut(s) 1322
AccIII TCCGGA 1 cut(s) 1334
AclWI GGATC 5 cut(s) 785, 816, 829, 1097, 1301
AcoI YGGCCR 1 cut(s) 806
AcsI RAATTY 7 cut(s) 442, 456, 574, 630, 1063, 1328, 1355
AcuI CTGAAG 2 cut(s) 539, 1053
AcyI GRCGYC 1 cut(s) 738
AfaI GTAC 2 cut(s) 63, 938
AfiI CCNNNNNNNGG 3 cut(s) 608, 815, 1316
AflIII ACRYGT 3 cut(s) 160, 933, 1268
AjnI CCWGG 2 cut(s) 287, 970
AjuI GAANNNNNNNTTGG 1 cut(s) 35
AluBI AGCT 3 cut(s) 284, 1094, 1314
AluI AGCT 3 cut(s) 284, 1094, 1314
Alw26I GTCTC 2 cut(s) 113, 791
AlwI GGATC 5 cut(s) 785, 816, 829, 1097, 1301
AlwNI CAGNNNCTG 1 cut(s) 284
Aor13HI TCCGGA 1 cut(s) 1334
AoxI GGCC 3 cut(s) 806, 968, 974
ApeKI GCWGC 7 cut(s) 278, 281, 284, 308, 380, 1180, 1454
ApoI RAATTY 7 cut(s) 442, 456, 574, 630, 1063, 1328, 1355
ArsI GACNNNNNNTTYG 2 cut(s) 85, 117
AspLEI GCGC 3 cut(s) 168, 385, 1322
AspS9I GGNCC 4 cut(s) 93, 106, 902, 974
AsuHPI GGTGA 1 cut(s) 784
AsuII TTCGAA 1 cut(s) 1415
AvaII GGWCC 3 cut(s) 93, 106, 902
BaeI ACNNNNGTAYC 2 cut(s) 1191, 1224
BalI TGGCCA 1 cut(s) 808
BamHI GGATCC 1 cut(s) 821
BanII GRGCYC 1 cut(s) 834
BbsI GAAGAC 2 cut(s) 261, 966
BbvI GCAGC 7 cut(s) 271, 290, 293, 295, 367, 1192, 1441
BccI CCATC 5 cut(s) 121, 156, 620, 935, 1115
BciT130I CCWGG 2 cut(s) 289, 972
BciVI GTATCC 2 cut(s) 609, 1038
BcoDI GTCTC 2 cut(s) 113, 791
BfaI CTAG 2 cut(s) 41, 65
BfmI CTRYAG 1 cut(s) 753
BfuI GTATCC 2 cut(s) 609, 1038
BisI GCNGC 7 cut(s) 279, 282, 285, 309, 381, 1181, 1455
BlsI GCNGC 7 cut(s) 280, 283, 286, 310, 382, 1182, 1456
Bme1390I CCNGG 2 cut(s) 289, 972
Bme18I GGWCC 3 cut(s) 93, 106, 902
BmgT120I GGNCC 4 cut(s) 93, 106, 902, 974
BmiI GGNNCC 2 cut(s) 94, 823
BmrFI CCNGG 2 cut(s) 289, 972
BmrI ACTGGG 2 cut(s) 1003, 1141
BmsI GCATC 4 cut(s) 172, 388, 715, 826
BmuI ACTGGG 2 cut(s) 1003, 1141
BpiI GAAGAC 2 cut(s) 261, 966
BpmI CTGGAG 1 cut(s) 1429
Bpu14I TTCGAA 1 cut(s) 1415
BsaAI YACGTR 1 cut(s) 936
BsaHI GRCGYC 1 cut(s) 738
BsaJI CCNNGG 3 cut(s) 474, 809, 971
BsaWI WCCGGW 1 cut(s) 1334
Bsc4I CCNNNNNNNGG 3 cut(s) 608, 815, 1316
Bse118I RCCGGY 1 cut(s) 1450
Bse1I ACTGG 6 cut(s) 386, 805, 977, 998, 1047, 1136
Bse3DI GCAATG 2 cut(s) 339, 1466
BseAI TCCGGA 1 cut(s) 1334
BseBI CCWGG 2 cut(s) 289, 972
BseDI CCNNGG 3 cut(s) 474, 809, 971
BseGI GGATG 2 cut(s) 631, 1126
BseLI CCNNNNNNNGG 3 cut(s) 608, 815, 1316
BseMI GCAATG 2 cut(s) 339, 1466
BseMII CTCAG 2 cut(s) 108, 869
BseNI ACTGG 6 cut(s) 386, 805, 977, 998, 1047, 1136
BseXI GCAGC 7 cut(s) 271, 290, 293, 295, 367, 1192, 1441
BseYI CCCAGC 1 cut(s) 908
BsgI GTGCAG 1 cut(s) 1144
Bsh1236I CGCG 1 cut(s) 1322
BshFI GGCC 3 cut(s) 808, 970, 976
BsiSI CCGG 2 cut(s) 1335, 1451
BslFI GGGAC 3 cut(s) 106, 546, 1377
BslI CCNNNNNNNGG 3 cut(s) 608, 815, 1316
BsmAI GTCTC 2 cut(s) 113, 791
BsmFI GGGAC 3 cut(s) 106, 546, 1377
BsmI GAATGC 1 cut(s) 71
BsnI GGCC 3 cut(s) 808, 970, 976
Bsp119I TTCGAA 1 cut(s) 1415
Bsp1286I GDGCHC 1 cut(s) 834
Bsp13I TCCGGA 1 cut(s) 1334
Bsp143I GATC 4 cut(s) 777, 821, 1102, 1306
Bsp19I CCATGG 2 cut(s) 474, 809
BspANI GGCC 3 cut(s) 808, 970, 976
BspCNI CTCAG 2 cut(s) 109, 868
BspEI TCCGGA 1 cut(s) 1334
BspFNI CGCG 1 cut(s) 1322
BspLI GGNNCC 2 cut(s) 94, 823
BspPI GGATC 5 cut(s) 785, 816, 829, 1097, 1301
BspT104I TTCGAA 1 cut(s) 1415
BsrDI GCAATG 2 cut(s) 339, 1466
BsrFI RCCGGY 1 cut(s) 1450
BsrI ACTGG 6 cut(s) 386, 805, 977, 998, 1047, 1136
BssAI RCCGGY 1 cut(s) 1450
BssECI CCNNGG 3 cut(s) 474, 809, 971
BssMI GATC 4 cut(s) 777, 821, 1102, 1306
BssNI GRCGYC 1 cut(s) 738
BssT1I CCWWGG 2 cut(s) 474, 809
Bst2UI CCWGG 2 cut(s) 289, 972
Bst4CI ACNGT 2 cut(s) 1060, 1303
BstACI GRCGYC 1 cut(s) 738
BstAPI GCANNNNNTGC 1 cut(s) 284
BstBAI YACGTR 1 cut(s) 936
BstBI TTCGAA 1 cut(s) 1415
BstC8I GCNNGC 4 cut(s) 29, 914, 1261, 1452
BstDEI CTNAG 4 cut(s) 117, 254, 424, 855
BstDSI CCRYGG 2 cut(s) 474, 809
BstF5I GGATG 2 cut(s) 631, 1126
BstFNI CGCG 1 cut(s) 1322
BstHHI GCGC 3 cut(s) 168, 385, 1322
BstKTI GATC 4 cut(s) 780, 824, 1105, 1309
BstMAI GTCTC 2 cut(s) 113, 791
BstMBI GATC 4 cut(s) 777, 821, 1102, 1306
BstMWI GCNNNNNNNGC 6 cut(s) 284, 428, 913, 922, 1223, 1382
BstNI CCWGG 2 cut(s) 289, 972
BstNSI RCATGY 6 cut(s) 52, 164, 193, 589, 721, 1272
BstSCI CCNGG 2 cut(s) 287, 970
BstSFI CTRYAG 1 cut(s) 753
BstUI CGCG 1 cut(s) 1322
BstV1I GCAGC 7 cut(s) 271, 290, 293, 295, 367, 1192, 1441
BstV2I GAAGAC 2 cut(s) 261, 966
BstX2I RGATCY 3 cut(s) 777, 821, 1102
BstYI RGATCY 3 cut(s) 777, 821, 1102
BsuI GTATCC 2 cut(s) 609, 1038
BsuRI GGCC 3 cut(s) 808, 970, 976
BtgI CCRYGG 2 cut(s) 474, 809
BtsCI GGATG 2 cut(s) 631, 1126
BtsI GCAGTG 2 cut(s) 358, 507
BtsIMutI CAGTG 3 cut(s) 358, 507, 984
Cac8I GCNNGC 4 cut(s) 29, 914, 1261, 1452
CaiI CAGNNNCTG 1 cut(s) 284
CfoI GCGC 3 cut(s) 168, 385, 1322
Cfr10I RCCGGY 1 cut(s) 1450
Cfr13I GGNCC 4 cut(s) 93, 106, 902, 974
CseI GACGC 2 cut(s) 746, 1365
Csp6I GTAC 2 cut(s) 62, 937
CviQI GTAC 2 cut(s) 62, 937
DdeI CTNAG 4 cut(s) 117, 254, 424, 855
DpnI GATC 4 cut(s) 779, 823, 1104, 1308
DpnII GATC 4 cut(s) 777, 821, 1102, 1306
DraI TTTAAA 1 cut(s) 891
EaeI YGGCCR 1 cut(s) 806
EciI GGCGGA 3 cut(s) 647, 894, 1278
Eco130I CCWWGG 2 cut(s) 474, 809
Eco24I GRGCYC 1 cut(s) 834
Eco47I GGWCC 3 cut(s) 93, 106, 902
Eco57I CTGAAG 2 cut(s) 539, 1053
EcoRI GAATTC 1 cut(s) 1063
EcoRII CCWGG 2 cut(s) 287, 970
EcoT14I CCWWGG 2 cut(s) 474, 809
EcoT38I GRGCYC 1 cut(s) 834
ErhI CCWWGG 2 cut(s) 474, 809
FaqI GGGAC 3 cut(s) 106, 546, 1377
FauI CCCGC 2 cut(s) 645, 1354
FauNDI CATATG 1 cut(s) 1222
Fnu4HI GCNGC 7 cut(s) 279, 282, 285, 309, 381, 1181, 1455
FokI GGATG 2 cut(s) 638, 1133
FriOI GRGCYC 1 cut(s) 834
Fsp4HI GCNGC 7 cut(s) 279, 282, 285, 309, 381, 1181, 1455
FspBI CTAG 2 cut(s) 41, 65
GlaI GCGC 3 cut(s) 167, 384, 1321
GluI GCNGC 7 cut(s) 279, 282, 285, 309, 381, 1181, 1455
GsaI CCCAGC 1 cut(s) 912
GsuI CTGGAG 1 cut(s) 1429
HaeIII GGCC 3 cut(s) 808, 970, 976
HapII CCGG 2 cut(s) 1335, 1451
HgaI GACGC 2 cut(s) 746, 1365
HhaI GCGC 3 cut(s) 168, 385, 1322
Hin1I GRCGYC 1 cut(s) 738
Hin6I GCGC 3 cut(s) 166, 383, 1320
HinP1I GCGC 3 cut(s) 166, 383, 1320
HincII GTYRAC 1 cut(s) 688
HindII GTYRAC 1 cut(s) 688
HinfI GANTC 5 cut(s) 266, 877, 896, 1365, 1417
HpaII CCGG 2 cut(s) 1335, 1451
HphI GGTGA 1 cut(s) 784
Hpy166II GTNNAC 4 cut(s) 54, 507, 688, 736
Hpy188I TCNGA 4 cut(s) 106, 118, 858, 985
Hpy188III TCNNGA 2 cut(s) 1106, 1335
Hpy8I GTNNAC 4 cut(s) 54, 507, 688, 736
Hpy99I CGWCG 1 cut(s) 885
HpyAV CCTTC 5 cut(s) 47, 119, 422, 563, 1398
HpyCH4III ACNGT 2 cut(s) 1060, 1303
HpyCH4IV ACGT 1 cut(s) 935
HpyCH4V TGCA 6 cut(s) 71, 1083, 1117, 1161, 1385, 1457
HpyF10VI GCNNNNNNNGC 6 cut(s) 284, 428, 913, 922, 1223, 1382
HpyF3I CTNAG 4 cut(s) 117, 254, 424, 855
HpySE526I ACGT 1 cut(s) 935
Hsp92I GRCGYC 1 cut(s) 738
HspAI GCGC 3 cut(s) 166, 383, 1320
Kpn2I TCCGGA 1 cut(s) 1334
KroI GCCGGC 1 cut(s) 1450
KroNI GCCGGC 1 cut(s) 1452
Kzo9I GATC 4 cut(s) 777, 821, 1102, 1306
Lsp1109I GCAGC 7 cut(s) 271, 290, 293, 295, 367, 1192, 1441
LweI GCATC 4 cut(s) 172, 388, 715, 826
MaeI CTAG 2 cut(s) 41, 65
MaeII ACGT 1 cut(s) 935
MaeIII GTNAC 4 cut(s) 235, 611, 790, 1271
MalI GATC 4 cut(s) 779, 823, 1104, 1308
MboI GATC 4 cut(s) 777, 821, 1102, 1306
MboII GAAGA 4 cut(s) 261, 971, 1059, 1427
MflI RGATCY 3 cut(s) 777, 821, 1102
MhlI GDGCHC 1 cut(s) 834
MlsI TGGCCA 1 cut(s) 808
MluNI TGGCCA 1 cut(s) 808
MlyI GAGTC 2 cut(s) 275, 1359
MmeI TCCRAC 2 cut(s) 241, 1381
Mox20I TGGCCA 1 cut(s) 808
MroI TCCGGA 1 cut(s) 1334
MroNI GCCGGC 1 cut(s) 1450
MscI TGGCCA 1 cut(s) 808
MseI TTAA 6 cut(s) 141, 294, 519, 564, 890, 1034
Msp20I TGGCCA 1 cut(s) 808
MspA1I CMGCKG 4 cut(s) 213, 284, 1183, 1397
MspI CCGG 2 cut(s) 1335, 1451
MspR9I CCNGG 2 cut(s) 289, 972
Mva1269I GAATGC 1 cut(s) 71
MvaI CCWGG 2 cut(s) 289, 972
MvnI CGCG 1 cut(s) 1322
MwoI GCNNNNNNNGC 6 cut(s) 284, 428, 913, 922, 1223, 1382
NaeI GCCGGC 1 cut(s) 1452
NcoI CCATGG 2 cut(s) 474, 809
NdeI CATATG 1 cut(s) 1222
NdeII GATC 4 cut(s) 777, 821, 1102, 1306
NgoMIV GCCGGC 1 cut(s) 1450
NlaIV GGNNCC 2 cut(s) 94, 823
NmuCI GTSAC 3 cut(s) 235, 790, 1271
NspI RCATGY 6 cut(s) 52, 164, 193, 589, 721, 1272
NspV TTCGAA 1 cut(s) 1415
PciI ACATGT 2 cut(s) 160, 1268
PctI GAATGC 1 cut(s) 71
PdiI GCCGGC 1 cut(s) 1452
PfeI GAWTC 3 cut(s) 877, 896, 1417
PflMI CCANNNNNTGG 2 cut(s) 815, 1316
PkrI GCNGC 7 cut(s) 280, 283, 286, 310, 382, 1182, 1456
PleI GAGTC 2 cut(s) 274, 1359
PpsI GAGTC 2 cut(s) 274, 1359
Ppu21I YACGTR 1 cut(s) 936
PscI ACATGT 2 cut(s) 160, 1268
PsiI TTATAA 1 cut(s) 1230
Psp6I CCWGG 2 cut(s) 287, 970
PspFI CCCAGC 1 cut(s) 908
PspGI CCWGG 2 cut(s) 287, 970
PspN4I GGNNCC 2 cut(s) 94, 823
PspPI GGNCC 4 cut(s) 93, 106, 902, 974
PstNI CAGNNNCTG 1 cut(s) 284
PsuI RGATCY 3 cut(s) 777, 821, 1102
PvuII CAGCTG 1 cut(s) 284
RsaI GTAC 2 cut(s) 63, 938
RsaNI GTAC 2 cut(s) 62, 937
SaqAI TTAA 6 cut(s) 141, 294, 519, 564, 890, 1034
SatI GCNGC 7 cut(s) 279, 282, 285, 309, 381, 1181, 1455
Sau3AI GATC 4 cut(s) 777, 821, 1102, 1306
Sau96I GGNCC 4 cut(s) 93, 106, 902, 974
SchI GAGTC 2 cut(s) 275, 1359
ScrFI CCNGG 2 cut(s) 289, 972
SduI GDGCHC 1 cut(s) 834
SfaNI GCATC 4 cut(s) 172, 388, 715, 826
SfcI CTRYAG 1 cut(s) 753
SfuI TTCGAA 1 cut(s) 1415
SinI GGWCC 3 cut(s) 93, 106, 902
SspI AATATT 1 cut(s) 331
SspMI CTAG 2 cut(s) 41, 65
StyD4I CCNGG 2 cut(s) 287, 970
StyI CCWWGG 2 cut(s) 474, 809
TaaI ACNGT 2 cut(s) 1060, 1303
TaiI ACGT 1 cut(s) 938
TaqI TCGA 3 cut(s) 396, 880, 1415
TaqII GACCGA 1 cut(s) 110
TatI WGTACW 1 cut(s) 61
TfiI GAWTC 3 cut(s) 877, 896, 1417
Tru1I TTAA 6 cut(s) 141, 294, 519, 564, 890, 1034
Tru9I TTAA 6 cut(s) 141, 294, 519, 564, 890, 1034
TscAI CASTG 3 cut(s) 358, 514, 984
TseFI GTSAC 3 cut(s) 235, 790, 1271
TseI GCWGC 7 cut(s) 278, 281, 284, 308, 380, 1180, 1454
Tsp45I GTSAC 3 cut(s) 235, 790, 1271
TspDTI ATGAA 6 cut(s) 64, 261, 404, 419, 1209, 1265
TspRI CASTG 3 cut(s) 358, 514, 984
Van91I CCANNNNNTGG 2 cut(s) 815, 1316
VpaK11BI GGWCC 3 cut(s) 93, 106, 902
XapI RAATTY 7 cut(s) 442, 456, 574, 630, 1063, 1328, 1355
XceI RCATGY 6 cut(s) 52, 164, 193, 589, 721, 1272
XspI CTAG 2 cut(s) 41, 65
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.