transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g40470 FvH4_3g40470 FvH4_3g40470 |
| malus_domestica | MD03G1051900.v1.1 MD11G1054000.v1.1 |
| prunus_persica | Prupe.6G041400_v2.0.a1 |
| pyrus_communis | pycom03g04130 pycom11g04360 |
| rosa_chinensis | RchiOBHm_Chr5g0073151 |
| rosa_laevigata | RLG00000036369 |
| rosa_multiflora | Rmu_sc0021999.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00008030 |
| rosa_rugosa | Rorug05G0421500 |
| rosa_samantha | Rh5AG478500 Rh5BG499200 Rh5CG522400 Rh5DG511300 |
| rosa_wichuraiana | Rw5G044460 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1194 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1122 |
| AatII | GACGTC | 2 cut(s) | 200, 653 |
| Acc36I | ACCTGC | 1 cut(s) | 1194 |
| AccB1I | GGYRCC | 1 cut(s) | 615 |
| AccI | GTMKAC | 3 cut(s) | 419, 647, 653 |
| AccII | CGCG | 3 cut(s) | 287, 386, 963 |
| AclWI | GGATC | 6 cut(s) | 392, 405, 421, 451, 519, 725 |
| AcoI | YGGCCR | 1 cut(s) | 186 |
| AcsI | RAATTY | 1 cut(s) | 1198 |
| AcuI | CTGAAG | 2 cut(s) | 1004, 1317 |
| AcyI | GRCGYC | 2 cut(s) | 197, 650 |
| AfaI | GTAC | 3 cut(s) | 470, 904, 1207 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 238, 331, 343, 407, 545, 546, 557, 618 |
| AflII | CTTAAG | 1 cut(s) | 920 |
| AgeI | ACCGGT | 1 cut(s) | 618 |
| AgsI | TTSAA | 6 cut(s) | 88, 207, 839, 1048, 1103, 1153 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 426 |
| AjiI | CACGTC | 1 cut(s) | 222 |
| AjnI | CCWGG | 2 cut(s) | 611, 1111 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 443, 475 |
| Alw21I | GWGCWC | 2 cut(s) | 720, 1282 |
| Alw26I | GTCTC | 1 cut(s) | 434 |
| AlwI | GGATC | 6 cut(s) | 392, 405, 421, 451, 519, 725 |
| Ama87I | CYCGRG | 1 cut(s) | 431 |
| AoxI | GGCC | 5 cut(s) | 186, 333, 536, 548, 560 |
| ApaI | GGGCCC | 3 cut(s) | 337, 540, 564 |
| ApeKI | GCWGC | 3 cut(s) | 182, 627, 773 |
| ApoI | RAATTY | 1 cut(s) | 1198 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 752, 784, 1123, 1155 |
| AsiGI | ACCGGT | 1 cut(s) | 618 |
| AspLEI | GCGC | 1 cut(s) | 822 |
| AsuC2I | CCSGG | 1 cut(s) | 278 |
| AsuHPI | GGTGA | 4 cut(s) | 73, 358, 596, 1118 |
| AvaI | CYCGRG | 1 cut(s) | 431 |
| AvaII | GGWCC | 6 cut(s) | 294, 454, 495, 723, 1115, 1235 |
| BaeGI | GKGCMC | 3 cut(s) | 337, 540, 564 |
| BamHI | GGATCC | 1 cut(s) | 397 |
| BanI | GGYRCC | 1 cut(s) | 615 |
| BanII | GRGCYC | 4 cut(s) | 337, 540, 564, 720 |
| BauI | CACGAG | 1 cut(s) | 1286 |
| BbsI | GAAGAC | 3 cut(s) | 195, 288, 1305 |
| Bbv12I | GWGCWC | 2 cut(s) | 720, 1282 |
| BbvI | GCAGC | 3 cut(s) | 194, 639, 760 |
| BccI | CCATC | 7 cut(s) | 433, 527, 536, 581, 632, 1086, 1090 |
| BceAI | ACGGC | 4 cut(s) | 146, 331, 424, 438 |
| BciT130I | CCWGG | 2 cut(s) | 613, 1113 |
| BciVI | GTATCC | 1 cut(s) | 744 |
| BcnI | CCSGG | 1 cut(s) | 278 |
| BcoDI | GTCTC | 1 cut(s) | 434 |
| BfaI | CTAG | 4 cut(s) | 179, 1122, 1167, 1317 |
| BfrI | CTTAAG | 1 cut(s) | 920 |
| BfuAI | ACCTGC | 1 cut(s) | 1194 |
| BfuI | GTATCC | 1 cut(s) | 744 |
| BlpI | GCTNAGC | 1 cut(s) | 714 |
| BmcAI | AGTACT | 1 cut(s) | 904 |
| Bme1390I | CCNGG | 3 cut(s) | 278, 613, 1113 |
| Bme18I | GGWCC | 6 cut(s) | 294, 454, 495, 723, 1115, 1235 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 426 |
| BmeT110I | CYCGRG | 1 cut(s) | 431 |
| BmgBI | CACGTC | 1 cut(s) | 222 |
| BmrFI | CCNGG | 3 cut(s) | 278, 613, 1113 |
| BmsI | GCATC | 4 cut(s) | 670, 955, 1056, 1198 |
| BpiI | GAAGAC | 3 cut(s) | 195, 288, 1305 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1269, 1301 |
| Bpu10I | CCTNAGC | 1 cut(s) | 233 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 714 |
| BpuEI | CTTGAG | 2 cut(s) | 836, 989 |
| BpuMI | CCSGG | 1 cut(s) | 278 |
| BsaAI | YACGTR | 1 cut(s) | 468 |
| BsaHI | GRCGYC | 2 cut(s) | 197, 650 |
| BsaJI | CCNNGG | 2 cut(s) | 128, 384 |
| BsaWI | WCCGGW | 1 cut(s) | 618 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 33, 63, 443, 446, 473, 476 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 238, 331, 343, 407, 545, 546, 557, 618 |
| Bse118I | RCCGGY | 3 cut(s) | 618, 656, 1117 |
| Bse1I | ACTGG | 1 cut(s) | 759 |
| Bse3DI | GCAATG | 2 cut(s) | 166, 535 |
| BseBI | CCWGG | 2 cut(s) | 613, 1113 |
| BseDI | CCNNGG | 2 cut(s) | 128, 384 |
| BseGI | GGATG | 5 cut(s) | 227, 273, 643, 685, 1078 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 238, 331, 343, 407, 545, 546, 557, 618 |
| BseMI | GCAATG | 2 cut(s) | 166, 535 |
| BseMII | CTCAG | 4 cut(s) | 224, 705, 890, 968 |
| BseNI | ACTGG | 1 cut(s) | 759 |
| BseRI | GAGGAG | 5 cut(s) | 38, 449, 464, 606, 609 |
| BseSI | GKGCMC | 3 cut(s) | 337, 540, 564 |
| BseX3I | CGGCCG | 1 cut(s) | 186 |
| BseXI | GCAGC | 3 cut(s) | 194, 639, 760 |
| Bsh1236I | CGCG | 3 cut(s) | 287, 386, 963 |
| Bsh1285I | CGRYCG | 2 cut(s) | 189, 657 |
| BshFI | GGCC | 5 cut(s) | 188, 335, 538, 550, 562 |
| BshNI | GGYRCC | 1 cut(s) | 615 |
| BshTI | ACCGGT | 1 cut(s) | 618 |
| BsiEI | CGRYCG | 2 cut(s) | 189, 657 |
| BsiHKAI | GWGCWC | 2 cut(s) | 720, 1282 |
| BsiHKCI | CYCGRG | 1 cut(s) | 431 |
| BsiSI | CCGG | 4 cut(s) | 277, 619, 657, 1118 |
| BslFI | GGGAC | 4 cut(s) | 189, 280, 899, 1269 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 238, 331, 343, 407, 545, 546, 557, 618 |
| BsmAI | GTCTC | 1 cut(s) | 434 |
| BsmFI | GGGAC | 4 cut(s) | 189, 280, 899, 1269 |
| BsmI | GAATGC | 1 cut(s) | 1062 |
| BsnI | GGCC | 5 cut(s) | 188, 335, 538, 550, 562 |
| BsoBI | CYCGRG | 1 cut(s) | 431 |
| Bsp120I | GGGCCC | 3 cut(s) | 333, 536, 560 |
| Bsp1286I | GDGCHC | 5 cut(s) | 337, 540, 564, 720, 1282 |
| Bsp143I | GATC | 6 cut(s) | 37, 397, 413, 443, 511, 730 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 714 |
| BspANI | GGCC | 5 cut(s) | 188, 335, 538, 550, 562 |
| BspCNI | CTCAG | 4 cut(s) | 225, 706, 891, 967 |
| BspFNI | CGCG | 3 cut(s) | 287, 386, 963 |
| BspMI | ACCTGC | 1 cut(s) | 1194 |
| BspPI | GGATC | 6 cut(s) | 392, 405, 421, 451, 519, 725 |
| BspT107I | GGYRCC | 1 cut(s) | 615 |
| BspTI | CTTAAG | 1 cut(s) | 920 |
| BsrDI | GCAATG | 2 cut(s) | 166, 535 |
| BsrFI | RCCGGY | 3 cut(s) | 618, 656, 1117 |
| BsrI | ACTGG | 1 cut(s) | 759 |
| BssAI | RCCGGY | 3 cut(s) | 618, 656, 1117 |
| BssECI | CCNNGG | 2 cut(s) | 128, 384 |
| BssMI | GATC | 6 cut(s) | 37, 397, 413, 443, 511, 730 |
| BssNI | GRCGYC | 2 cut(s) | 197, 650 |
| BssSI | CACGAG | 1 cut(s) | 1286 |
| Bst2BI | CACGAG | 1 cut(s) | 1286 |
| Bst2UI | CCWGG | 2 cut(s) | 613, 1113 |
| Bst4CI | ACNGT | 2 cut(s) | 936, 1235 |
| BstACI | GRCGYC | 2 cut(s) | 197, 650 |
| BstAFI | CTTAAG | 1 cut(s) | 920 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1066 |
| BstBAI | YACGTR | 1 cut(s) | 468 |
| BstC8I | GCNNGC | 4 cut(s) | 711, 741, 778, 799 |
| BstDEI | CTNAG | 4 cut(s) | 233, 714, 899, 954 |
| BstDSI | CCRYGG | 2 cut(s) | 128, 384 |
| BstF5I | GGATG | 5 cut(s) | 227, 273, 643, 685, 1078 |
| BstFNI | CGCG | 3 cut(s) | 287, 386, 963 |
| BstHHI | GCGC | 1 cut(s) | 822 |
| BstKTI | GATC | 6 cut(s) | 40, 400, 416, 446, 514, 733 |
| BstMAI | GTCTC | 1 cut(s) | 434 |
| BstMBI | GATC | 6 cut(s) | 37, 397, 413, 443, 511, 730 |
| BstMCI | CGRYCG | 2 cut(s) | 189, 657 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 156, 188, 392, 613, 689, 715, 798, 1066 |
| BstNI | CCWGG | 2 cut(s) | 613, 1113 |
| BstSCI | CCNGG | 3 cut(s) | 276, 611, 1111 |
| BstSLI | GKGCMC | 3 cut(s) | 337, 540, 564 |
| BstUI | CGCG | 3 cut(s) | 287, 386, 963 |
| BstV1I | GCAGC | 3 cut(s) | 194, 639, 760 |
| BstV2I | GAAGAC | 3 cut(s) | 195, 288, 1305 |
| BstX2I | RGATCY | 1 cut(s) | 397 |
| BstYI | RGATCY | 1 cut(s) | 397 |
| BstZI | CGGCCG | 1 cut(s) | 186 |
| BsuI | GTATCC | 1 cut(s) | 744 |
| BsuRI | GGCC | 5 cut(s) | 188, 335, 538, 550, 562 |
| BtgI | CCRYGG | 2 cut(s) | 128, 384 |
| BtgZI | GCGATG | 1 cut(s) | 978 |
| BtrI | CACGTC | 1 cut(s) | 222 |
| BtsCI | GGATG | 5 cut(s) | 227, 273, 643, 685, 1078 |
| BtsIMutI | CAGTG | 1 cut(s) | 980 |
| BveI | ACCTGC | 1 cut(s) | 1194 |
| Cac8I | GCNNGC | 4 cut(s) | 711, 741, 778, 799 |
| CciNI | GCGGCCGC | 1 cut(s) | 186 |
| CfoI | GCGC | 1 cut(s) | 822 |
| Cfr10I | RCCGGY | 3 cut(s) | 618, 656, 1117 |
| Cfr42I | CCGCGG | 1 cut(s) | 387 |
| CseI | GACGC | 3 cut(s) | 201, 293, 914 |
| Csp6I | GTAC | 3 cut(s) | 469, 903, 1206 |
| CspAI | ACCGGT | 1 cut(s) | 618 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 454, 489 |
| CviAII | CATG | 4 cut(s) | 308, 370, 676, 1135 |
| CviQI | GTAC | 3 cut(s) | 469, 903, 1206 |
| DdeI | CTNAG | 4 cut(s) | 233, 714, 899, 954 |
| DpnI | GATC | 6 cut(s) | 39, 399, 415, 445, 513, 732 |
| DpnII | GATC | 6 cut(s) | 37, 397, 413, 443, 511, 730 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1122 |
| DriI | GACNNNNNGTC | 1 cut(s) | 426 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1122 |
| EaeI | YGGCCR | 1 cut(s) | 186 |
| EagI | CGGCCG | 1 cut(s) | 186 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 426 |
| EciI | GGCGGA | 3 cut(s) | 250, 410, 426 |
| Ecl136II | GAGCTC | 1 cut(s) | 718 |
| EclXI | CGGCCG | 1 cut(s) | 186 |
| Eco24I | GRGCYC | 4 cut(s) | 337, 540, 564, 720 |
| Eco47I | GGWCC | 6 cut(s) | 294, 454, 495, 723, 1115, 1235 |
| Eco52I | CGGCCG | 1 cut(s) | 186 |
| Eco53kI | GAGCTC | 1 cut(s) | 718 |
| Eco57I | CTGAAG | 2 cut(s) | 1004, 1317 |
| Eco88I | CYCGRG | 1 cut(s) | 431 |
| EcoICRI | GAGCTC | 1 cut(s) | 718 |
| EcoO109I | RGGNCCY | 3 cut(s) | 294, 333, 454 |
| EcoRII | CCWGG | 2 cut(s) | 611, 1111 |
| EcoT22I | ATGCAT | 2 cut(s) | 970, 1140 |
| EcoT38I | GRGCYC | 4 cut(s) | 337, 540, 564, 720 |
| FaeI | CATG | 4 cut(s) | 311, 373, 679, 1138 |
| FaqI | GGGAC | 4 cut(s) | 189, 280, 899, 1269 |
| FatI | CATG | 4 cut(s) | 307, 369, 675, 1134 |
| FauI | CCCGC | 3 cut(s) | 30, 311, 485 |
| FblI | GTMKAC | 3 cut(s) | 419, 647, 653 |
| FokI | GGATG | 5 cut(s) | 214, 260, 650, 692, 1065 |
| FriOI | GRGCYC | 4 cut(s) | 337, 540, 564, 720 |
| FspBI | CTAG | 4 cut(s) | 179, 1122, 1167, 1317 |
| GlaI | GCGC | 1 cut(s) | 821 |
| HaeIII | GGCC | 5 cut(s) | 188, 335, 538, 550, 562 |
| HapII | CCGG | 4 cut(s) | 277, 619, 657, 1118 |
| HgaI | GACGC | 3 cut(s) | 201, 293, 914 |
| HhaI | GCGC | 1 cut(s) | 822 |
| Hin1I | GRCGYC | 2 cut(s) | 197, 650 |
| Hin1II | CATG | 4 cut(s) | 311, 373, 679, 1138 |
| Hin6I | GCGC | 1 cut(s) | 820 |
| HinP1I | GCGC | 1 cut(s) | 820 |
| HincII | GTYRAC | 3 cut(s) | 420, 648, 654 |
| HindII | GTYRAC | 3 cut(s) | 420, 648, 654 |
| HindIII | AAGCTT | 1 cut(s) | 485 |
| HinfI | GANTC | 3 cut(s) | 760, 1040, 1257 |
| HpaII | CCGG | 4 cut(s) | 277, 619, 657, 1118 |
| HphI | GGTGA | 4 cut(s) | 73, 358, 596, 1118 |
| Hpy166II | GTNNAC | 6 cut(s) | 6, 216, 225, 420, 648, 654 |
| Hpy188III | TCNNGA | 7 cut(s) | 174, 431, 701, 721, 880, 1006, 1288 |
| Hpy8I | GTNNAC | 6 cut(s) | 6, 216, 225, 420, 648, 654 |
| Hpy99I | CGWCG | 9 cut(s) | 199, 202, 421, 424, 511, 649, 652, 655, 930 |
| HpyAV | CCTTC | 3 cut(s) | 94, 845, 982 |
| HpyCH4III | ACNGT | 2 cut(s) | 936, 1235 |
| HpyCH4IV | ACGT | 5 cut(s) | 197, 221, 467, 650, 872 |
| HpyCH4V | TGCA | 7 cut(s) | 31, 808, 968, 1060, 1138, 1189, 1228 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 156, 188, 392, 613, 689, 715, 798, 1066 |
| HpyF3I | CTNAG | 4 cut(s) | 233, 714, 899, 954 |
| HpySE526I | ACGT | 5 cut(s) | 197, 221, 467, 650, 872 |
| Hsp92I | GRCGYC | 2 cut(s) | 197, 650 |
| Hsp92II | CATG | 4 cut(s) | 311, 373, 679, 1138 |
| HspAI | GCGC | 1 cut(s) | 820 |
| KflI | GGGWCCC | 1 cut(s) | 294 |
| KspI | CCGCGG | 1 cut(s) | 387 |
| Kzo9I | GATC | 6 cut(s) | 37, 397, 413, 443, 511, 730 |
| LmnI | GCTCC | 3 cut(s) | 138, 321, 1277 |
| Lsp1109I | GCAGC | 3 cut(s) | 194, 639, 760 |
| LweI | GCATC | 4 cut(s) | 670, 955, 1056, 1198 |
| MaeI | CTAG | 4 cut(s) | 179, 1122, 1167, 1317 |
| MaeII | ACGT | 5 cut(s) | 197, 221, 467, 650, 872 |
| MaeIII | GTNAC | 4 cut(s) | 930, 957, 1124, 1248 |
| MalI | GATC | 6 cut(s) | 39, 399, 415, 445, 513, 732 |
| MboI | GATC | 6 cut(s) | 37, 397, 413, 443, 511, 730 |
| MboII | GAAGA | 6 cut(s) | 70, 195, 293, 613, 997, 1310 |
| MflI | RGATCY | 1 cut(s) | 397 |
| MhlI | GDGCHC | 5 cut(s) | 337, 540, 564, 720, 1282 |
| MluCI | AATT | 6 cut(s) | 73, 88, 256, 502, 1148, 1198 |
| MlyI | GAGTC | 1 cut(s) | 1251 |
| MmeI | TCCRAC | 4 cut(s) | 76, 84, 342, 489 |
| Mph1103I | ATGCAT | 2 cut(s) | 970, 1140 |
| MseI | TTAA | 3 cut(s) | 405, 921, 971 |
| MspA1I | CMGCKG | 2 cut(s) | 185, 386 |
| MspCI | CTTAAG | 1 cut(s) | 920 |
| MspI | CCGG | 4 cut(s) | 277, 619, 657, 1118 |
| MspR9I | CCNGG | 3 cut(s) | 278, 613, 1113 |
| Mva1269I | GAATGC | 1 cut(s) | 1062 |
| MvaI | CCWGG | 2 cut(s) | 613, 1113 |
| MvnI | CGCG | 3 cut(s) | 287, 386, 963 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 156, 188, 392, 613, 689, 715, 798, 1066 |
| NciI | CCSGG | 1 cut(s) | 278 |
| NdeII | GATC | 6 cut(s) | 37, 397, 413, 443, 511, 730 |
| NlaIII | CATG | 4 cut(s) | 311, 373, 679, 1138 |
| NmuCI | GTSAC | 1 cut(s) | 1124 |
| NotI | GCGGCCGC | 1 cut(s) | 186 |
| NsiI | ATGCAT | 2 cut(s) | 970, 1140 |
| PaeR7I | CTCGAG | 1 cut(s) | 431 |
| PaqCI | CACCTGC | 1 cut(s) | 1194 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 650 |
| PctI | GAATGC | 1 cut(s) | 1062 |
| PfeI | GAWTC | 2 cut(s) | 760, 1040 |
| PflFI | GACNNNGTC | 1 cut(s) | 199 |
| PfoI | TCCNGGA | 1 cut(s) | 276 |
| PinAI | ACCGGT | 1 cut(s) | 618 |
| PleI | GAGTC | 1 cut(s) | 1251 |
| PpsI | GAGTC | 1 cut(s) | 1251 |
| Ppu21I | YACGTR | 1 cut(s) | 468 |
| PpuMI | RGGWCCY | 2 cut(s) | 294, 454 |
| Psp124BI | GAGCTC | 1 cut(s) | 720 |
| Psp5II | RGGWCCY | 2 cut(s) | 294, 454 |
| Psp6I | CCWGG | 2 cut(s) | 611, 1111 |
| PspGI | CCWGG | 2 cut(s) | 611, 1111 |
| PspOMI | GGGCCC | 3 cut(s) | 333, 536, 560 |
| PspPPI | RGGWCCY | 2 cut(s) | 294, 454 |
| PsuI | RGATCY | 1 cut(s) | 397 |
| PsyI | GACNNNGTC | 1 cut(s) | 199 |
| RsaI | GTAC | 3 cut(s) | 470, 904, 1207 |
| RsaNI | GTAC | 3 cut(s) | 469, 903, 1206 |
| SacI | GAGCTC | 1 cut(s) | 720 |
| SacII | CCGCGG | 1 cut(s) | 387 |
| SalI | GTCGAC | 3 cut(s) | 418, 646, 652 |
| SaqAI | TTAA | 3 cut(s) | 405, 921, 971 |
| Sau3AI | GATC | 6 cut(s) | 37, 397, 413, 443, 511, 730 |
| ScaI | AGTACT | 1 cut(s) | 904 |
| SchI | GAGTC | 1 cut(s) | 1251 |
| ScrFI | CCNGG | 3 cut(s) | 278, 613, 1113 |
| SduI | GDGCHC | 5 cut(s) | 337, 540, 564, 720, 1282 |
| SfaNI | GCATC | 4 cut(s) | 670, 955, 1056, 1198 |
| Sfr274I | CTCGAG | 1 cut(s) | 431 |
| Sfr303I | CCGCGG | 1 cut(s) | 387 |
| SgrBI | CCGCGG | 1 cut(s) | 387 |
| SgrDI | CGTCGACG | 2 cut(s) | 418, 646 |
| SinI | GGWCC | 6 cut(s) | 294, 454, 495, 723, 1115, 1235 |
| SlaI | CTCGAG | 1 cut(s) | 431 |
| SmlI | CTYRAG | 4 cut(s) | 431, 815, 920, 1004 |
| SmoI | CTYRAG | 4 cut(s) | 431, 815, 920, 1004 |
| Sse9I | AATT | 6 cut(s) | 73, 88, 256, 502, 1148, 1198 |
| SspMI | CTAG | 4 cut(s) | 179, 1122, 1167, 1317 |
| SstI | GAGCTC | 1 cut(s) | 720 |
| StyD4I | CCNGG | 3 cut(s) | 276, 611, 1111 |
| TaaI | ACNGT | 2 cut(s) | 936, 1235 |
| TaiI | ACGT | 5 cut(s) | 200, 224, 470, 653, 875 |
| TaqI | TCGA | 6 cut(s) | 419, 432, 480, 647, 653, 1260 |
| TasI | AATT | 6 cut(s) | 73, 88, 256, 502, 1148, 1198 |
| TatI | WGTACW | 1 cut(s) | 902 |
| TauI | GCSGC | 7 cut(s) | 188, 191, 389, 392, 395, 525, 528 |
| TfiI | GAWTC | 2 cut(s) | 760, 1040 |
| Tru1I | TTAA | 3 cut(s) | 405, 921, 971 |
| Tru9I | TTAA | 3 cut(s) | 405, 921, 971 |
| TscAI | CASTG | 1 cut(s) | 987 |
| TseFI | GTSAC | 1 cut(s) | 1124 |
| TseI | GCWGC | 3 cut(s) | 182, 627, 773 |
| Tsp45I | GTSAC | 1 cut(s) | 1124 |
| TspDTI | ATGAA | 2 cut(s) | 262, 1032 |
| TspGWI | ACGGA | 1 cut(s) | 390 |
| TspRI | CASTG | 1 cut(s) | 987 |
| Tth111I | GACNNNGTC | 1 cut(s) | 199 |
| Vha464I | CTTAAG | 1 cut(s) | 920 |
| VpaK11BI | GGWCC | 6 cut(s) | 294, 454, 495, 723, 1115, 1235 |
| XapI | RAATTY | 1 cut(s) | 1198 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 751 |
| XhoI | CTCGAG | 1 cut(s) | 431 |
| XmiI | GTMKAC | 3 cut(s) | 419, 647, 653 |
| XspI | CTAG | 4 cut(s) | 179, 1122, 1167, 1317 |
| ZraI | GACGTC | 2 cut(s) | 198, 651 |
| ZrmI | AGTACT | 1 cut(s) | 904 |
| Zsp2I | ATGCAT | 2 cut(s) | 970, 1140 |