pycom11g10810

Protein disulfide isomerase-like 5-1

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Forward (+)
9191404 .. 9194331
2928 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g10810.2

Sequence Viewer

Length: 450 bp
ATGAAAGCCGGCTCTGCTTCTCTAGTTTTCATCCCAGTTCTTCTCTTTCTTCTTCCAATTCTAACAACATATACCGAAGCCGAGGTTATAACCCTAACCGCTGACACCTTCTCCGACAAGGTGAAGGAGAAGGACACGGCATGGTTTGTGAAATTTTGTGTGCCATGGTGTAAACATTGTAAGAACTTGGGTACATTGTGGGAGGACCTTGGGAAGACAATGGAAGGTGAAGACGAAATAGAGGTTGGGGAGGTTGATTGTAGTACGAGTAAACCAGTATGTTCAAAAGTTGACATTCATTCATATCCTACGTTTAAAGTATTCTATGATGGTGAAGAAGTTGCAAAATATCAAGGGCCGAGGGATGTTGACTCGCTAAAGAACTTTGTCTTGGAAGAAGCTGAAAAGGCAGCAACAAAGGCGCAGCTTGACAGTGATAAAGAGTTGTAG

Protein Analysis

150

Amino Acids

16.7

Weight (kDa)

4.66

Isoelectric Point (pI)

23.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 89
AciI CCGC 1 cut(s) 99
AcsI RAATTY 1 cut(s) 152
AfaI GTAC 2 cut(s) 193, 265
AgsI TTSAA 1 cut(s) 285
AjuI GAANNNNNNNTTGG 4 cut(s) 228, 260, 374, 406
AluBI AGCT 2 cut(s) 401, 427
AluI AGCT 2 cut(s) 401, 427
AoxI GGCC 1 cut(s) 356
ApeKI GCWGC 2 cut(s) 410, 424
ApoI RAATTY 1 cut(s) 152
AspLEI GCGC 1 cut(s) 424
AspS9I GGNCC 2 cut(s) 205, 356
AsuHPI GGTGA 3 cut(s) 133, 239, 344
AvaII GGWCC 1 cut(s) 205
BbsI GAAGAC 2 cut(s) 221, 237
BbvI GCAGC 2 cut(s) 422, 436
BccI CCATC 1 cut(s) 323
BceAI ACGGC 1 cut(s) 153
BfaI CTAG 1 cut(s) 23
BisI GCNGC 2 cut(s) 411, 425
BlsI GCNGC 2 cut(s) 412, 426
Bme18I GGWCC 1 cut(s) 205
BmgT120I GGNCC 2 cut(s) 205, 356
BmrI ACTGGG 1 cut(s) 29
BmuI ACTGGG 1 cut(s) 29
BpiI GAAGAC 2 cut(s) 221, 237
BsaJI CCNNGG 4 cut(s) 81, 164, 208, 359
BsaXI ACNNNNNCTCC 2 cut(s) 95, 125
Bse118I RCCGGY 1 cut(s) 8
Bse1I ACTGG 2 cut(s) 35, 275
BseDI CCNNGG 4 cut(s) 81, 164, 208, 359
BseGI GGATG 2 cut(s) 30, 370
BseNI ACTGG 2 cut(s) 35, 275
BseXI GCAGC 2 cut(s) 422, 436
BshFI GGCC 1 cut(s) 358
BsiSI CCGG 1 cut(s) 9
BsnI GGCC 1 cut(s) 358
Bsp19I CCATGG 1 cut(s) 164
BspACI CCGC 1 cut(s) 99
BspANI GGCC 1 cut(s) 358
BsrFI RCCGGY 1 cut(s) 8
BsrI ACTGG 2 cut(s) 35, 275
BssAI RCCGGY 1 cut(s) 8
BssECI CCNNGG 4 cut(s) 81, 164, 208, 359
BssT1I CCWWGG 2 cut(s) 164, 208
Bst4CI ACNGT 1 cut(s) 434
BstC8I GCNNGC 1 cut(s) 10
BstDSI CCRYGG 1 cut(s) 164
BstF5I GGATG 2 cut(s) 30, 370
BstHHI GCGC 1 cut(s) 424
BstMWI GCNNNNNNNGC 3 cut(s) 14, 407, 419
BstV1I GCAGC 2 cut(s) 422, 436
BstV2I GAAGAC 2 cut(s) 221, 237
BsuRI GGCC 1 cut(s) 358
BtgI CCRYGG 1 cut(s) 164
BtsCI GGATG 2 cut(s) 30, 370
BtsIMutI CAGTG 1 cut(s) 439
Cac8I GCNNGC 1 cut(s) 10
CfoI GCGC 1 cut(s) 424
Cfr10I RCCGGY 1 cut(s) 8
Cfr13I GGNCC 2 cut(s) 205, 356
Csp6I GTAC 2 cut(s) 192, 264
CviAII CATG 2 cut(s) 141, 165
CviJI RGCY 6 cut(s) 8, 12, 80, 358, 401, 427
CviKI_1 RGCY 6 cut(s) 8, 12, 80, 358, 401, 427
CviQI GTAC 2 cut(s) 192, 264
DraI TTTAAA 1 cut(s) 316
Eco130I CCWWGG 2 cut(s) 164, 208
Eco47I GGWCC 1 cut(s) 205
EcoO109I RGGNCCY 1 cut(s) 205
EcoT14I CCWWGG 2 cut(s) 164, 208
ErhI CCWWGG 2 cut(s) 164, 208
FaeI CATG 2 cut(s) 144, 168
FaiI YATR 8 cut(s) 70, 72, 89, 142, 166, 280, 304, 327
FatI CATG 2 cut(s) 140, 164
Fnu4HI GCNGC 2 cut(s) 411, 425
FokI GGATG 2 cut(s) 17, 377
Fsp4HI GCNGC 2 cut(s) 411, 425
FspBI CTAG 1 cut(s) 23
GlaI GCGC 1 cut(s) 423
GluI GCNGC 2 cut(s) 411, 425
HaeIII GGCC 1 cut(s) 358
HapII CCGG 1 cut(s) 9
HhaI GCGC 1 cut(s) 424
Hin1II CATG 2 cut(s) 144, 168
Hin6I GCGC 1 cut(s) 422
HinP1I GCGC 1 cut(s) 422
HincII GTYRAC 2 cut(s) 292, 370
HindII GTYRAC 2 cut(s) 292, 370
HinfI GANTC 1 cut(s) 371
HpaII CCGG 1 cut(s) 9
HphI GGTGA 3 cut(s) 133, 239, 344
Hpy166II GTNNAC 4 cut(s) 173, 272, 292, 370
Hpy188I TCNGA 1 cut(s) 115
Hpy8I GTNNAC 4 cut(s) 173, 272, 292, 370
HpyAV CCTTC 4 cut(s) 118, 118, 124, 218
HpyCH4III ACNGT 1 cut(s) 434
HpyCH4IV ACGT 1 cut(s) 311
HpyCH4V TGCA 1 cut(s) 344
HpyF10VI GCNNNNNNNGC 3 cut(s) 14, 407, 419
HpySE526I ACGT 1 cut(s) 311
Hsp92II CATG 2 cut(s) 144, 168
HspAI GCGC 1 cut(s) 422
KroI GCCGGC 1 cut(s) 8
KroNI GCCGGC 1 cut(s) 10
LpnPI CCDG 3 cut(s) 22, 48, 288
Lsp1109I GCAGC 2 cut(s) 422, 436
MaeI CTAG 1 cut(s) 23
MaeII ACGT 1 cut(s) 311
MboII GAAGA 7 cut(s) 32, 41, 44, 226, 242, 347, 407
MluCI AATT 2 cut(s) 57, 152
MlyI GAGTC 1 cut(s) 365
MmeI TCCRAC 1 cut(s) 138
MnlI CCTC 5 cut(s) 76, 196, 235, 244, 354
MroNI GCCGGC 1 cut(s) 8
MseI TTAA 1 cut(s) 315
MspA1I CMGCKG 1 cut(s) 101
MspI CCGG 1 cut(s) 9
MwoI GCNNNNNNNGC 3 cut(s) 14, 407, 419
NaeI GCCGGC 1 cut(s) 10
NcoI CCATGG 1 cut(s) 164
NgoMIV GCCGGC 1 cut(s) 8
NlaIII CATG 2 cut(s) 144, 168
NmeAIII GCCGAG 2 cut(s) 106, 384
PdiI GCCGGC 1 cut(s) 10
PkrI GCNGC 2 cut(s) 412, 426
PleI GAGTC 1 cut(s) 365
PpsI GAGTC 1 cut(s) 365
PpuMI RGGWCCY 1 cut(s) 205
PsiI TTATAA 1 cut(s) 89
Psp5II RGGWCCY 1 cut(s) 205
PspPI GGNCC 2 cut(s) 205, 356
PspPPI RGGWCCY 1 cut(s) 205
RsaI GTAC 2 cut(s) 193, 265
RsaNI GTAC 2 cut(s) 192, 264
SaqAI TTAA 1 cut(s) 315
SatI GCNGC 2 cut(s) 411, 425
Sau96I GGNCC 2 cut(s) 205, 356
SchI GAGTC 1 cut(s) 365
SinI GGWCC 1 cut(s) 205
Sse9I AATT 2 cut(s) 57, 152
SsiI CCGC 1 cut(s) 99
SspMI CTAG 1 cut(s) 23
StyI CCWWGG 2 cut(s) 164, 208
TaaI ACNGT 1 cut(s) 434
TaiI ACGT 1 cut(s) 314
TasI AATT 2 cut(s) 57, 152
Tru1I TTAA 1 cut(s) 315
Tru9I TTAA 1 cut(s) 315
TscAI CASTG 1 cut(s) 439
TseI GCWGC 2 cut(s) 410, 424
TspDTI ATGAA 4 cut(s) 17, 19, 287, 291
TspRI CASTG 1 cut(s) 439
VpaK11BI GGWCC 1 cut(s) 205
XapI RAATTY 1 cut(s) 152
XspI CTAG 1 cut(s) 23
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.