Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0005093

Physical Location & Seq

Genomic Coordinates Reverse (-)

11749540 .. 11750841

Gene Structure 1302 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1302 bp

ATGCAGGCTCTTCTTCCACCCTCAACTAACAATCTCACAAAACCCGCCCTCCGCCTCCCCCGGGTCGCCCCACCCCGCCTCGCCGTCCTCAAATGCGCCTACCGCTCCGACTCCGTCCACTTACCCAACAGCGTCGGCTCCAGCCGCGCTGACTGGCAGAGCTCCTGCGCCATTCTTGCCAGCAACGTCGTTTCCCAGCAGCCCCAGCCGCCATCTGACAAATCGAGAAACGCTGACCATGTCGGCTCGGTCAACGGCCACAAGACCTCCGTTGACCTCGAGATTGTCCCCATGGAGAAGCTCTCGTCGTCGTCGTCGTCGTCGTCCCCGGAGGACAAGTCGTCTTCTCCGCCTCCCAGGGCGCTCACCATCACCGACCTCTCTCCAGCTCCGATGCACGGAGCCCAGCTGCGTGTCGCCTACCAAGGCGTCCCCGGGGCGTACTCCGAAGCCGCCGCTGGAAAAGCCTACCCGAAATGCGAGGCCATCCCCTGTGACCAATTCGAAGTCGCCTTCCAAGCCGTCGAGCTCTGGATCGCCGATCGAGCAGTCCTCCCAGTTGAAAACTCCCTTGGCGGCTCAATTCATCGCAATTACGATCTCCTCCTCCGCCACCGCCTCCACATCGTCGGAGAAGTCCAGCTTCCGGTCCACCACTGCCTCCTAGCCCTCCCCGGAGTCCGGAAGGAGTACTTGAACCGAGTCATCTCGCATCCTCAAGCCTTGGCTCAGTGCGAGCTGACTCTCACGAAACTCGGCCTCAACGTCACTCGCGAAGCCGTCGACGACACCGCCGGCGCAGCCGAGTTCGTCGCCGCCAACAACCTCCGCGACACGGCGGCCATCGCTTCGGCACGTGCCGCCGAACTCTACGGCATGGAGATCTTGGAGAACGGGATCCAGGACGACTCGAGCAACGTGACCCGGTTCGTGATGCTGGCCCGGGAGCCGATCATTCCCCGCACGGACCGGCCGTTCAAGACGAGCATCGTCTTCGCGCATGACAAGGGGACGTCGGTGCTGTTCAAGGTCCTATCGGCGTTCGCCTTTCGGAACATCAGCCTGACAAAGATTGAGTCGCGGCCGCACCGGAACCGTCCGATCAGGCTGGTGAGCGATTCGAACGAAGGACCGGCGAGTCACTTCGAGTACCTGTTCTACGTGGACTTCGAGGCGTCGATGGCGGAGGTTAGGGCACAAAACGCGCTGGCGGAGGTTCAGGAGTTCACGTCGTTCTTGAGGGTGCTGGGAAGCTACCCCATTGATATGACTCCTTGGAGTCCATCTAGGGGGGGTGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006520 GO:0006558 GO:0006570 GO:0006571 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009072 GO:0009073 GO:0009094 GO:0009095 GO:0009314 GO:0009416 GO:0009507 GO:0009536 GO:0009628 GO:0009637 GO:0009642 GO:0009645 GO:0009987 GO:0010244 GO:0016053 GO:0016829 GO:0016835 GO:0016836 GO:0017144 GO:0019438 GO:0019752 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0047769 GO:0050896 GO:0071704 GO:0080167 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607 GO:1902221 GO:1902223

KEGG Pathways

Metabolic & Signaling

ko00400 ko01100 ko01110 ko01130 ko01230 map00400 map01100 map01110 map01130 map01230

Pfam Domains

Protein Families

PDT

Protein Analysis

434

Amino Acids

47.16

Weight (kDa)

6.68

Isoelectric Point (pI)

45.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PDT	PF00800	139 - 316	2.5e-59	Prephenate dehydratase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005093)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G08250 AT2G27820 AT3G44720 AT5G22630
fragaria_vesca	FvH4_3g29870
malus_domestica	MD03G1134800.v1.1 MD11G1157600.v1.1
prunus_persica	Prupe.6G119200_v2.0.a1
pyrus_communis	pycom03g09080 pycom11g12770
rosa_chinensis	RchiOBHm_Chr5g0055201 RchiOBHm_Chr7g0203231
rosa_laevigata	RLG00000034973
rosa_multiflora	Rmu_sc0000994.1_g000007 Rmu_sc0010754.1_g000003 Rmu_sc0011582.1_g000002 Rmu_sc0018729.1_g000008
rosa_roxburghii	Rroxscaffold_1G00025130
rosa_rugosa	Rorug05G0291700 Rorug07G0075300.1
rosa_samantha	Rh5AG361500 Rh5BG372900 Rh5CG394800 Rh5DG386300 Rh7AG204600 Rh7BG203800 Rh7CG215600 Rh7DG211200
rosa_wichuraiana	Rw5G033990 Rw7G017810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1137
AatII	GACGTC	1 cut(s)	1016
AccBSI	CCGCTC	1 cut(s)	105
AccI	GTMKAC	1 cut(s)	783
AccII	CGCG	6 cut(s)	147, 774, 831, 998, 1081, 1205
AccIII	TCCGGA	1 cut(s)	681
AclWI	GGATC	3 cut(s)	542, 892, 905
AcoI	YGGCCR	4 cut(s)	256, 840, 971, 1082
AcvI	CACGTG	1 cut(s)	857
AcyI	GRCGYC	3 cut(s)	429, 1013, 1175
AfaI	GTAC	3 cut(s)	443, 692, 1151
AfiI	CCNNNNNNNGG	6 cut(s)	61, 398, 646, 681, 835, 1289
AgsI	TTSAA	4 cut(s)	563, 697, 979, 1027
AhdI	GACNNNNNGTC	1 cut(s)	340
AjiI	CACGTC	1 cut(s)	1230
AjnI	CCWGG	2 cut(s)	356, 900
AjuI	GAANNNNNNNTTGG	2 cut(s)	555, 587
AloI	GAACNNNNNNTCC	2 cut(s)	959, 991
AluBI	AGCT	8 cut(s)	162, 301, 389, 409, 529, 643, 739, 1254
AluI	AGCT	8 cut(s)	162, 301, 389, 409, 529, 643, 739, 1254
Alw21I	GWGCWC	2 cut(s)	164, 531
AlwI	GGATC	3 cut(s)	542, 892, 905
Ama87I	CYCGRG	5 cut(s)	60, 278, 434, 910, 942
Aor13HI	TCCGGA	1 cut(s)	681
AoxI	GGCC	7 cut(s)	256, 483, 757, 840, 939, 971, 1082
ApeKI	GCWGC	3 cut(s)	199, 409, 800
ArsI	GACNNNNNNTTYG	2 cut(s)	1061, 1093
AspLEI	GCGC	7 cut(s)	98, 149, 170, 364, 800, 1000, 1207
AspS9I	GGNCC	5 cut(s)	649, 940, 967, 1030, 1130
AsuC2I	CCSGG	9 cut(s)	61, 62, 329, 435, 436, 675, 925, 943, 944
AsuHPI	GGTGA	3 cut(s)	358, 364, 1123
AsuII	TTCGAA	2 cut(s)	504, 1121
AvaI	CYCGRG	5 cut(s)	60, 278, 434, 910, 942
AvaII	GGWCC	4 cut(s)	649, 967, 1030, 1130
BaeGI	GKGCMC	1 cut(s)	1198
BamHI	GGATCC	1 cut(s)	897
BanII	GRGCYC	3 cut(s)	164, 406, 531
BbrPI	CACGTG	1 cut(s)	857
BbsI	GAAGAC	2 cut(s)	336, 985
Bbv12I	GWGCWC	2 cut(s)	164, 531
BbvI	GCAGC	3 cut(s)	211, 396, 812
BccI	CCATC	6 cut(s)	220, 377, 494, 851, 1174, 1291
BceAI	ACGGC	7 cut(s)	68, 271, 506, 764, 852, 889, 958
BcgI	CGANNNNNNTGC	2 cut(s)	976, 1010
BciT130I	CCWGG	2 cut(s)	358, 902
BcnI	CCSGG	9 cut(s)	61, 62, 329, 435, 436, 675, 925, 943, 944
BfaI	CTAG	2 cut(s)	665, 1287
BfoI	RGCGCY	1 cut(s)	365
BglII	AGATCT	1 cut(s)	882
BmcAI	AGTACT	1 cut(s)	692
Bme18I	GGWCC	4 cut(s)	649, 967, 1030, 1130
BmeRI	GACNNNNNGTC	1 cut(s)	340
BmeT110I	CYCGRG	5 cut(s)	60, 278, 434, 910, 942
BmgBI	CACGTC	1 cut(s)	1230
BmgT120I	GGNCC	5 cut(s)	649, 940, 967, 1030, 1130
BmiI	GGNNCC	5 cut(s)	139, 403, 899, 948, 1094
BmrI	ACTGGG	1 cut(s)	551
BmsI	GCATC	4 cut(s)	384, 721, 924, 996
BmuI	ACTGGG	1 cut(s)	551
BpiI	GAAGAC	2 cut(s)	336, 985
BplI	GAGNNNNNCTC	4 cut(s)	287, 319, 537, 569
BpmI	CTGGAG	2 cut(s)	124, 369
Bpu14I	TTCGAA	2 cut(s)	504, 1121
BpuEI	CTTGAG	2 cut(s)	702, 1258
BpuMI	CCSGG	9 cut(s)	61, 62, 329, 435, 436, 675, 925, 943, 944
BsaAI	YACGTR	2 cut(s)	857, 1162
BsaHI	GRCGYC	3 cut(s)	429, 1013, 1175
BsaWI	WCCGGW	3 cut(s)	646, 681, 1089
BsaXI	ACNNNNNCTCC	8 cut(s)	33, 63, 251, 281, 323, 353, 1214, 1244
Bsc4I	CCNNNNNNNGG	6 cut(s)	61, 398, 646, 681, 835, 1289
Bse118I	RCCGGY	3 cut(s)	794, 969, 1132
Bse1I	ACTGG	2 cut(s)	158, 557
BseAI	TCCGGA	1 cut(s)	681
BseBI	CCWGG	2 cut(s)	358, 902
BseGI	GGATG	2 cut(s)	486, 712
BseLI	CCNNNNNNNGG	6 cut(s)	61, 398, 646, 681, 835, 1289
BseMII	CTCAG	1 cut(s)	743
BseNI	ACTGG	2 cut(s)	158, 557
BseRI	GAGGAG	2 cut(s)	593, 596
BseSI	GKGCMC	1 cut(s)	1198
BseX3I	CGGCCG	2 cut(s)	971, 1082
BseXI	GCAGC	3 cut(s)	211, 396, 812
BseYI	CCCAGC	4 cut(s)	195, 204, 405, 1246
Bsh1236I	CGCG	6 cut(s)	147, 774, 831, 998, 1081, 1205
Bsh1285I	CGRYCG	3 cut(s)	544, 974, 1085
BshFI	GGCC	7 cut(s)	258, 485, 759, 842, 941, 973, 1084
BsiEI	CGRYCG	3 cut(s)	544, 974, 1085
BsiHKAI	GWGCWC	2 cut(s)	164, 531
BsiHKCI	CYCGRG	5 cut(s)	60, 278, 434, 910, 942
BslFI	GGGAC	4 cut(s)	272, 310, 416, 1024
BslI	CCNNNNNNNGG	6 cut(s)	61, 398, 646, 681, 835, 1289
BsmFI	GGGAC	4 cut(s)	272, 310, 416, 1024
BsnI	GGCC	7 cut(s)	258, 485, 759, 842, 941, 973, 1084
BsoBI	CYCGRG	5 cut(s)	60, 278, 434, 910, 942
Bsp119I	TTCGAA	2 cut(s)	504, 1121
Bsp1286I	GDGCHC	4 cut(s)	164, 406, 531, 1198
Bsp13I	TCCGGA	1 cut(s)	681
Bsp143I	GATC	7 cut(s)	534, 541, 598, 882, 897, 951, 1101
Bsp19I	CCATGG	1 cut(s)	291
Bsp68I	TCGCGA	1 cut(s)	774
BspANI	GGCC	7 cut(s)	258, 485, 759, 842, 941, 973, 1084
BspCNI	CTCAG	1 cut(s)	742
BspEI	TCCGGA	1 cut(s)	681
BspFNI	CGCG	6 cut(s)	147, 774, 831, 998, 1081, 1205
BspLI	GGNNCC	5 cut(s)	139, 403, 899, 948, 1094
BspPI	GGATC	3 cut(s)	542, 892, 905
BspQI	GCTCTTC	1 cut(s)	15
BspT104I	TTCGAA	2 cut(s)	504, 1121
BsrBI	CCGCTC	1 cut(s)	105
BsrFI	RCCGGY	3 cut(s)	794, 969, 1132
BsrI	ACTGG	2 cut(s)	158, 557
BssAI	RCCGGY	3 cut(s)	794, 969, 1132
BssMI	GATC	7 cut(s)	534, 541, 598, 882, 897, 951, 1101
BssNI	GRCGYC	3 cut(s)	429, 1013, 1175
BssT1I	CCWWGG	5 cut(s)	291, 424, 571, 723, 1274
Bst2UI	CCWGG	2 cut(s)	358, 902
Bst4CI	ACNGT	1 cut(s)	1097
Bst6I	CTCTTC	1 cut(s)	15
BstACI	GRCGYC	3 cut(s)	429, 1013, 1175
BstBAI	YACGTR	2 cut(s)	857, 1162
BstBI	TTCGAA	2 cut(s)	504, 1121
BstC8I	GCNNGC	6 cut(s)	6, 181, 737, 796, 939, 1209
BstDEI	CTNAG	1 cut(s)	729
BstDSI	CCRYGG	1 cut(s)	291
BstF5I	GGATG	2 cut(s)	486, 712
BstFNI	CGCG	6 cut(s)	147, 774, 831, 998, 1081, 1205
BstH2I	RGCGCY	1 cut(s)	365
BstHHI	GCGC	7 cut(s)	98, 149, 170, 364, 800, 1000, 1207
BstKTI	GATC	7 cut(s)	537, 544, 601, 885, 900, 954, 1104
BstMBI	GATC	7 cut(s)	534, 541, 598, 882, 897, 951, 1101
BstMCI	CGRYCG	3 cut(s)	544, 974, 1085
BstNI	CCWGG	2 cut(s)	358, 902
BstSLI	GKGCMC	1 cut(s)	1198
BstUI	CGCG	6 cut(s)	147, 774, 831, 998, 1081, 1205
BstV1I	GCAGC	3 cut(s)	211, 396, 812
BstV2I	GAAGAC	2 cut(s)	336, 985
BstX2I	RGATCY	2 cut(s)	882, 897
BstYI	RGATCY	2 cut(s)	882, 897
BstZI	CGGCCG	2 cut(s)	971, 1082
BsuRI	GGCC	7 cut(s)	258, 485, 759, 842, 941, 973, 1084
BtgI	CCRYGG	1 cut(s)	291
BtgZI	GCGATG	2 cut(s)	572, 829
BtrI	CACGTC	1 cut(s)	1230
BtsCI	GGATG	2 cut(s)	486, 712
BtsI	GCAGTG	1 cut(s)	655
BtsIMutI	CAGTG	2 cut(s)	655, 737
BtuMI	TCGCGA	1 cut(s)	774
Cac8I	GCNNGC	6 cut(s)	6, 181, 737, 796, 939, 1209
CciNI	GCGGCCGC	1 cut(s)	1082
CfoI	GCGC	7 cut(s)	98, 149, 170, 364, 800, 1000, 1207
Cfr10I	RCCGGY	3 cut(s)	794, 969, 1132
Cfr13I	GGNCC	5 cut(s)	649, 940, 967, 1030, 1130
Cfr9I	CCCGGG	3 cut(s)	60, 434, 942
CpoI	CGGWCCG	1 cut(s)	967
CseI	GACGC	3 cut(s)	121, 418, 1164
Csp6I	GTAC	3 cut(s)	442, 691, 1150
CspI	CGGWCCG	1 cut(s)	967
CviAII	CATG	4 cut(s)	239, 292, 877, 1001
CviQI	GTAC	3 cut(s)	442, 691, 1150
DdeI	CTNAG	1 cut(s)	729
DpnI	GATC	7 cut(s)	536, 543, 600, 884, 899, 953, 1103
DpnII	GATC	7 cut(s)	534, 541, 598, 882, 897, 951, 1101
DrdI	GACNNNNNNGTC	1 cut(s)	1137
DriI	GACNNNNNGTC	1 cut(s)	340
DseDI	GACNNNNNNGTC	1 cut(s)	1137
EaeI	YGGCCR	4 cut(s)	256, 840, 971, 1082
EagI	CGGCCG	2 cut(s)	971, 1082
Eam1104I	CTCTTC	1 cut(s)	15
Eam1105I	GACNNNNNGTC	1 cut(s)	340
EarI	CTCTTC	1 cut(s)	15
EciI	GGCGGA	5 cut(s)	41, 339, 599, 1199, 1226
Ecl136II	GAGCTC	2 cut(s)	162, 529
EclXI	CGGCCG	2 cut(s)	971, 1082
Eco130I	CCWWGG	5 cut(s)	291, 424, 571, 723, 1274
Eco24I	GRGCYC	3 cut(s)	164, 406, 531
Eco47I	GGWCC	4 cut(s)	649, 967, 1030, 1130
Eco52I	CGGCCG	2 cut(s)	971, 1082
Eco53kI	GAGCTC	2 cut(s)	162, 529
Eco72I	CACGTG	1 cut(s)	857
Eco88I	CYCGRG	5 cut(s)	60, 278, 434, 910, 942
EcoICRI	GAGCTC	2 cut(s)	162, 529
EcoO109I	RGGNCCY	1 cut(s)	1030
EcoRII	CCWGG	2 cut(s)	356, 900
EcoT14I	CCWWGG	5 cut(s)	291, 424, 571, 723, 1274
EcoT38I	GRGCYC	3 cut(s)	164, 406, 531
ErhI	CCWWGG	5 cut(s)	291, 424, 571, 723, 1274
FaeI	CATG	4 cut(s)	242, 295, 880, 1004
FaiI	YATR	5 cut(s)	240, 293, 878, 1002, 1268
FalI	AAGNNNNNCTT	4 cut(s)	627, 659, 677, 709
FaqI	GGGAC	4 cut(s)	272, 310, 416, 1024
FatI	CATG	4 cut(s)	238, 291, 876, 1000
FauI	CCCGC	3 cut(s)	52, 83, 968
FblI	GTMKAC	1 cut(s)	783
FokI	GGATG	2 cut(s)	473, 699
FriOI	GRGCYC	3 cut(s)	164, 406, 531
FspBI	CTAG	2 cut(s)	665, 1287
GlaI	GCGC	7 cut(s)	97, 148, 169, 363, 799, 999, 1206
GsaI	CCCAGC	4 cut(s)	199, 208, 409, 1250
GsuI	CTGGAG	2 cut(s)	124, 369
HaeII	RGCGCY	1 cut(s)	365
HaeIII	GGCC	7 cut(s)	258, 485, 759, 842, 941, 973, 1084
HgaI	GACGC	3 cut(s)	121, 418, 1164
HhaI	GCGC	7 cut(s)	98, 149, 170, 364, 800, 1000, 1207
Hin1I	GRCGYC	3 cut(s)	429, 1013, 1175
Hin1II	CATG	4 cut(s)	242, 295, 880, 1004
Hin6I	GCGC	7 cut(s)	96, 147, 168, 362, 798, 998, 1205
HinP1I	GCGC	7 cut(s)	96, 147, 168, 362, 798, 998, 1205
HincII	GTYRAC	3 cut(s)	253, 274, 784
HindII	GTYRAC	3 cut(s)	253, 274, 784
HphI	GGTGA	3 cut(s)	358, 364, 1123
Hpy166II	GTNNAC	7 cut(s)	118, 253, 274, 652, 784, 1165, 1227
Hpy188I	TCNGA	7 cut(s)	109, 217, 393, 448, 632, 1053, 1101
Hpy8I	GTNNAC	7 cut(s)	118, 253, 274, 652, 784, 1165, 1227
HpyAV	CCTTC	3 cut(s)	523, 679, 1121
HpyCH4III	ACNGT	1 cut(s)	1097
HpyCH4IV	ACGT	7 cut(s)	186, 765, 856, 918, 1013, 1161, 1229
HpyCH4V	TGCA	2 cut(s)	4, 397
HpyF3I	CTNAG	1 cut(s)	729
HpySE526I	ACGT	7 cut(s)	186, 765, 856, 918, 1013, 1161, 1229
Hsp92I	GRCGYC	3 cut(s)	429, 1013, 1175
Hsp92II	CATG	4 cut(s)	242, 295, 880, 1004
HspAI	GCGC	7 cut(s)	96, 147, 168, 362, 798, 998, 1205
Kpn2I	TCCGGA	1 cut(s)	681
KroI	GCCGGC	1 cut(s)	794
KroNI	GCCGGC	1 cut(s)	796
Kzo9I	GATC	7 cut(s)	534, 541, 598, 882, 897, 951, 1101
LguI	GCTCTTC	1 cut(s)	15
LmnI	GCTCC	6 cut(s)	110, 143, 167, 394, 401, 946
Lsp1109I	GCAGC	3 cut(s)	211, 396, 812
LweI	GCATC	4 cut(s)	384, 721, 924, 996
MaeI	CTAG	2 cut(s)	665, 1287
MaeII	ACGT	7 cut(s)	186, 765, 856, 918, 1013, 1161, 1229
MaeIII	GTNAC	4 cut(s)	494, 766, 919, 1139
MalI	GATC	7 cut(s)	536, 543, 600, 884, 899, 953, 1103
MbiI	CCGCTC	1 cut(s)	105
MboI	GATC	7 cut(s)	534, 541, 598, 882, 897, 951, 1101
MboII	GAAGA	3 cut(s)	5, 336, 985
MflI	RGATCY	2 cut(s)	882, 897
MhlI	GDGCHC	4 cut(s)	164, 406, 531, 1198
MluCI	AATT	3 cut(s)	500, 582, 592
MlyI	GAGTC	9 cut(s)	104, 687, 711, 736, 902, 1085, 1147, 1264, 1288
MmeI	TCCRAC	2 cut(s)	132, 610
MreI	CGCCGGCG	1 cut(s)	794
MroI	TCCGGA	1 cut(s)	681
MroNI	GCCGGC	1 cut(s)	794
MslI	CAYNNNNRTG	1 cut(s)	1265
MspA1I	CMGCKG	2 cut(s)	409, 458
MvaI	CCWGG	2 cut(s)	358, 902
MvnI	CGCG	6 cut(s)	147, 774, 831, 998, 1081, 1205
NaeI	GCCGGC	1 cut(s)	796
NciI	CCSGG	9 cut(s)	61, 62, 329, 435, 436, 675, 925, 943, 944
NcoI	CCATGG	1 cut(s)	291
NdeII	GATC	7 cut(s)	534, 541, 598, 882, 897, 951, 1101
NgoMIV	GCCGGC	1 cut(s)	794
NlaIII	CATG	4 cut(s)	242, 295, 880, 1004
NlaIV	GGNNCC	5 cut(s)	139, 403, 899, 948, 1094
NmeAIII	GCCGAG	2 cut(s)	735, 829
NmuCI	GTSAC	4 cut(s)	494, 766, 919, 1139
NotI	GCGGCCGC	1 cut(s)	1082
NruI	TCGCGA	1 cut(s)	774
NspV	TTCGAA	2 cut(s)	504, 1121
PaeR7I	CTCGAG	2 cut(s)	278, 910
PasI	CCCWGGG	1 cut(s)	357
PciSI	GCTCTTC	1 cut(s)	15
PcsI	WCGNNNNNNNCGW	8 cut(s)	311, 314, 317, 320, 762, 771, 971, 1167
PdiI	GCCGGC	1 cut(s)	796
PfeI	GAWTC	1 cut(s)	1118
PflFI	GACNNNGTC	2 cut(s)	113, 239
PfoI	TCCNGGA	1 cut(s)	900
Ple19I	CGATCG	1 cut(s)	544
PleI	GAGTC	9 cut(s)	104, 686, 710, 736, 902, 1084, 1146, 1264, 1287
PmaCI	CACGTG	1 cut(s)	857
PmlI	CACGTG	1 cut(s)	857
PpsI	GAGTC	9 cut(s)	104, 686, 710, 736, 902, 1084, 1146, 1264, 1287
Ppu21I	YACGTR	2 cut(s)	857, 1162
PpuMI	RGGWCCY	1 cut(s)	1030
Psp124BI	GAGCTC	2 cut(s)	164, 531
Psp5II	RGGWCCY	1 cut(s)	1030
Psp6I	CCWGG	2 cut(s)	356, 900
PspCI	CACGTG	1 cut(s)	857
PspFI	CCCAGC	4 cut(s)	195, 204, 405, 1246
PspGI	CCWGG	2 cut(s)	356, 900
PspN4I	GGNNCC	5 cut(s)	139, 403, 899, 948, 1094
PspPI	GGNCC	5 cut(s)	649, 940, 967, 1030, 1130
PspPPI	RGGWCCY	1 cut(s)	1030
PspXI	VCTCGAGB	1 cut(s)	910
PsuI	RGATCY	2 cut(s)	882, 897
PsyI	GACNNNGTC	2 cut(s)	113, 239
PvuI	CGATCG	1 cut(s)	544
PvuII	CAGCTG	1 cut(s)	409
RruI	TCGCGA	1 cut(s)	774
RsaI	GTAC	3 cut(s)	443, 692, 1151
RsaNI	GTAC	3 cut(s)	442, 691, 1150
RseI	CAYNNNNRTG	1 cut(s)	1265
Rsr2I	CGGWCCG	1 cut(s)	967
RsrII	CGGWCCG	1 cut(s)	967
SacI	GAGCTC	2 cut(s)	164, 531
SalI	GTCGAC	1 cut(s)	782
SapI	GCTCTTC	1 cut(s)	15
Sau3AI	GATC	7 cut(s)	534, 541, 598, 882, 897, 951, 1101
Sau96I	GGNCC	5 cut(s)	649, 940, 967, 1030, 1130
ScaI	AGTACT	1 cut(s)	692
SchI	GAGTC	9 cut(s)	104, 687, 711, 736, 902, 1085, 1147, 1264, 1288
SduI	GDGCHC	4 cut(s)	164, 406, 531, 1198
SfaNI	GCATC	4 cut(s)	384, 721, 924, 996
Sfr274I	CTCGAG	2 cut(s)	278, 910
SfuI	TTCGAA	2 cut(s)	504, 1121
SgrAI	CRCCGGYG	1 cut(s)	794
SgrDI	CGTCGACG	1 cut(s)	782
SinI	GGWCC	4 cut(s)	649, 967, 1030, 1130
SlaI	CTCGAG	2 cut(s)	278, 910
SmaI	CCCGGG	3 cut(s)	62, 436, 944
SmiMI	CAYNNNNRTG	1 cut(s)	1265
SmlI	CTYRAG	4 cut(s)	278, 717, 910, 1237
SmoI	CTYRAG	4 cut(s)	278, 717, 910, 1237
Sse9I	AATT	3 cut(s)	500, 582, 592
SspMI	CTAG	2 cut(s)	665, 1287
SstI	GAGCTC	2 cut(s)	164, 531
StyI	CCWWGG	5 cut(s)	291, 424, 571, 723, 1274
TaaI	ACNGT	1 cut(s)	1097
TaiI	ACGT	7 cut(s)	189, 768, 859, 921, 1016, 1164, 1232
TaqII	GACCGA	1 cut(s)	238
TasI	AATT	3 cut(s)	500, 582, 592
TatI	WGTACW	1 cut(s)	690
TfiI	GAWTC	1 cut(s)	1118
TscAI	CASTG	2 cut(s)	662, 737
TseFI	GTSAC	4 cut(s)	494, 766, 919, 1139
TseI	GCWGC	3 cut(s)	199, 409, 800
Tsp45I	GTSAC	4 cut(s)	494, 766, 919, 1139
TspDTI	ATGAA	1 cut(s)	575
TspGWI	ACGGA	4 cut(s)	103, 259, 414, 980
TspMI	CCCGGG	3 cut(s)	60, 434, 942
TspRI	CASTG	2 cut(s)	662, 737
Tth111I	GACNNNGTC	2 cut(s)	113, 239
VpaK11BI	GGWCC	4 cut(s)	649, 967, 1030, 1130
XhoI	CTCGAG	2 cut(s)	278, 910
XmaI	CCCGGG	3 cut(s)	60, 434, 942
XmiI	GTMKAC	1 cut(s)	783
XspI	CTAG	2 cut(s)	665, 1287
ZraI	GACGTC	1 cut(s)	1014
ZrmI	AGTACT	1 cut(s)	692

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.