Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0007879

Physical Location & Seq

Genomic Coordinates Reverse (-)

11833441 .. 11844674

Gene Structure 11234 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2454 bp

ATGTTGTGGGGTCAGGCAGGGGTCATCGTTCAAACTCGGGAAGCAAATTGCGATAGAAATAGAAGAAACGCGTTTCGAGTTTCTATCTTATTGGTTCTTGTCGTTTCTTACTCTCGCTCTCCCTCCTCTGTCTCTCTCTCCCCTCTCTCACTTCACTCCCTTCTGCACTACTCACTCTCACACTCCAAAACCCTCCGCCTTTCTCTCTCTGGGTTTTATTGGTGTTGTACTTCCTGCATTTCTCAGAAAGCCCTAACCTTGCCGTACAACACCAGATCTGCGCTGACATTCATTCAGTTCAAGCTATGCTCCAATAGTTCACTCAACCCCCAAATGTCGAACTCCGACCCGAAAACCCGACCCCGTCCAGGTCCATGGCCTCCCGTCCCGGAGTCCTCCCCAATTCCCCCTTCTTCCTGGGCTAAGAAAACCGGGTTCCGCCCCAAGTTCTCCGGCGAGACCAATGCCAGTGATTCTGGCCAGATATCGCTGCCGCCACCCCGGCCCCGGGAGCCAGAAGCCCAGCCCGATCTCGAGGCTGGTCGGGCCCGCCCCCAACCGGTGCTGAATGGTGTACCCGAGCGCGAGATGGCTACACCGTCCCCAGCGGCAGCGGCGCCTTCGGATAAGGACAATAAGGTGAAGAGGAGGAAGGAGTCTGATGGAGGGTCGAAGAGTGCGGCTAATGGGCCCCATGGGGCTAATGGGCAGTCTGCGGCTGGGACTACGGAGCCCAATTCGCAACCGCGGAGGGCGGCCAGGAGTGAGGAGGTGGTTGATGTTTTGCCACATGGGCTTGACGATGATGGGTATGTGTCTAGGCACTCTCATATGAAGTATGAGCTCAGAGATACTCCTGGTCTGGTTCCCATTGGTCTCTACGGGTTTCAGCATTATCTTTCCATGTTGGGTTCGATAATTCTAATTCCACTCATCATAGTTCCGGCAATGGGTGGTACTTATGAGGATACCGCAAATGTTGTCTCCACAGTGCTTTTTGTTTCAGGAGTGACCACTCTCTTGCAGACATCGTTTGGATCCAGATTGCCCTTGATACAGGGCCCGTCATTTGTTTACCTAGCTCCTGCATTGGCGATAATCAACTCCCCAGAATTTCAAGGACTCACTGGAAATAATTTTAAGCATATCATGAAAGAGCTACAGGGGGCTGTAATAATAGGTTCAGCTTTTCAAGCAATACTTGGATATAGTGGACTAATGTCAGTATTTTTGAGGTTGATCAATCCAGTGGTTGTGTCACCAACAATTGCTGCTGTTGGACTTTCGTTCTATAGTTATGGTTTCCCGTTAGTTGGTAATTGTCTTGAGATTGGTGCGGTGCAGATATTAGTGGTCATTCTTTTTTCTCTTTACTTACGAAAGATATCTGTTTTTGGTCATCGTGTATTTCTGATATATGCGGTTCCGTTGGGTCTGGCAATCACATGGTCGGCTGCTTTCCTACTAACTGAAGCTGGAGCATATAGCTATAAAGGTTGTGATATAAATGTACCTGCATCAAACATAGTATCTGAACATTGCAGAAAGCATGTTTTGAGGATGAAGAGCTGTCGAGTTGATACTTCTCATGCACTAAGGTCTTCCCCCTGGTTTAGGTTTCCCTATCCGTTGCAATGGGGTACTCCTGTATTCCACTGGAAAATGTCCCTTGTCATGTGTGTGGTATCAATTATTGCGTCAGTTGATTCGATTGGGTCATATCATGCATCGTCATTATTGGTGGCATCCAGACCTCCTACTCCTGGTGTTCTTAGTCGAGGGATTGGTCTGGAAGGTCTTTCTAGTGTCTTGGCTGGTCTATGGGGTACTGGAACAGGGTCCACGAGCTTAACTGAAAATGTGCACACAATAGCTGTCACTAAGATGGGAAGCCGTAGAGCTGTTGAGTTGGGTGCATGCGTTTTGATCGTCTTATCCCTTGTTGGTAAAGTTGGAGGCTTTCTAGCATCTATTCCCCAAGTCATGGTTGCCGCACTGCTCTGCTTCATGTGGGCGATGCTTGCTGCATTAGGCCTTTCAAATCTACGTTATAGTGAGGCTGGAAGCTCTAGGAATATTATCATAGTCGGGTTATCTTTGTTTTTCTCGCTGTCAATACCGGCCTACTTTCAGCAATATGGCATCTCTCCAAACTCCAACTTATCTGTTCCAAGTTACTTTCAGCCATACATTATAGCTTCTCATGGGCCCTTCCGCAGCAAAAATAGAGGGGTGAACTATGTGCTGAACACGTTATTCTCATTACACATGGTGGTTGCATTCCTTGTGGCTGTTATCCTGGATAACACTGTCCCTGGTAGTCGTCAAGAACGCGGGGTGTATGTGTGGTCTGAATCTGAGGTTGCTAAGAGGGAGCCTGCAGTTGCCAAGGACTATCAGCTGCCCTTCAGAATTAGCCGGGTTTTCAGATGGGTGAAATGGGTCGGCATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005345 GO:0005350 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006855 GO:0006863 GO:0008150 GO:0008324 GO:0015075 GO:0015205 GO:0015207 GO:0015208 GO:0015210 GO:0015238 GO:0015291 GO:0015293 GO:0015294 GO:0015318 GO:0015851 GO:0015853 GO:0015854 GO:0015855 GO:0015857 GO:0015893 GO:0016020 GO:0022804 GO:0022857 GO:0022890 GO:0034220 GO:0035344 GO:0042221 GO:0042493 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:0072530 GO:0072531 GO:0098655 GO:0098657 GO:0098702 GO:0098710 GO:0098721 GO:0098739 GO:1903716 GO:1903791 GO:1904082 GO:1904823

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Xan_ur_permease

Protein Analysis

818

Amino Acids

88.57

Weight (kDa)

9.64

Isoelectric Point (pI)

49.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Xan_ur_permease	PF00860	293 - 710	3.3e-66	Permease family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007879)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G27810 AT2G27810 AT2G27810 AT2G27810
fragaria_vesca	FvH4_3g24260
malus_domestica	MD03G1135100.v1.1 MD11G1157800.v1.1
prunus_persica	Prupe.6G119500_v2.0.a1 Prupe.6G119500_v2.0.a1 Prupe.6G119500_v2.0.a1
pyrus_communis	pycom03g09100 pycom11g12810
rosa_chinensis	RchiOBHm_Chr5g0043401
rosa_laevigata	RLG00000034184
rosa_multiflora	Rmu_sc0000060.1_g000066 Rmu_sc0007797.1_g000001
rosa_roxburghii	Rroxscaffold_1G00037480
rosa_rugosa	Rorug05G0205700
rosa_samantha	Rh5AG291400 Rh5BG298000 Rh5CG327500 Rh5DG307400
rosa_wichuraiana	Rw0G010300 Rw5G027030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1522
AccB1I	GGYRCC	1 cut(s)	616
AccB7I	CCANNNNNTGG	1 cut(s)	1984
AccII	CGCG	4 cut(s)	71, 585, 748, 2334
AclWI	GGATC	2 cut(s)	1032, 1045
AcoI	YGGCCR	2 cut(s)	478, 756
AcsI	RAATTY	1 cut(s)	1112
AcuI	CTGAAG	2 cut(s)	1491, 2392
AcyI	GRCGYC	1 cut(s)	617
AdeI	CACNNNGTG	1 cut(s)	2272
AfaI	GTAC	7 cut(s)	229, 266, 576, 958, 1512, 1642, 1828
AfiI	CCNNNNNNNGG	9 cut(s)	368, 507, 508, 559, 950, 1313, 1614, 1763, 1984
AflIII	ACRYGT	2 cut(s)	69, 2250
AgeI	ACCGGT	1 cut(s)	559
AgsI	TTSAA	5 cut(s)	32, 301, 1118, 1193, 2040
AjnI	CCWGG	8 cut(s)	367, 416, 758, 856, 1607, 1762, 2298, 2314
AjuI	GAANNNNNNNTTGG	2 cut(s)	394, 426
Alw21I	GWGCWC	2 cut(s)	846, 1866
Alw26I	GTCTC	4 cut(s)	136, 452, 881, 988
Alw44I	GTGCAC	1 cut(s)	1862
AlwI	GGATC	2 cut(s)	1032, 1045
Ama87I	CYCGRG	4 cut(s)	36, 507, 533, 578
ApaI	GGGCCC	4 cut(s)	550, 693, 1064, 2211
ApaLI	GTGCAC	1 cut(s)	1862
ApeKI	GCWGC	7 cut(s)	490, 611, 1271, 1454, 2024, 2217, 2401
ApoI	RAATTY	1 cut(s)	1112
AsiGI	ACCGGT	1 cut(s)	559
AspLEI	GCGC	3 cut(s)	283, 585, 619
AsuC2I	CCSGG	6 cut(s)	389, 433, 502, 508, 509, 2420
AsuHPI	GGTGA	4 cut(s)	652, 1251, 2245, 2446
AvaI	CYCGRG	4 cut(s)	36, 507, 533, 578
AvaII	GGWCC	2 cut(s)	371, 1839
BaeGI	GKGCMC	5 cut(s)	550, 693, 1064, 1866, 2211
BaeI	ACNNNNGTAYC	2 cut(s)	1632, 1665
BalI	TGGCCA	1 cut(s)	480
BamHI	GGATCC	1 cut(s)	1037
BanI	GGYRCC	1 cut(s)	616
BanII	GRGCYC	6 cut(s)	550, 693, 735, 846, 1064, 2211
BauI	CACGAG	1 cut(s)	1843
BbsI	GAAGAC	1 cut(s)	1593
Bbv12I	GWGCWC	2 cut(s)	846, 1866
BbvI	GCAGC	7 cut(s)	477, 623, 1258, 1441, 2011, 2229, 2388
BccI	CCATC	5 cut(s)	583, 656, 800, 1879, 2424
BceAI	ACGGC	2 cut(s)	247, 1878
BcgI	CGANNNNNNTGC	2 cut(s)	446, 480
BciT130I	CCWGG	8 cut(s)	369, 418, 760, 858, 1609, 1764, 2300, 2316
BciVI	GTATCC	1 cut(s)	961
BclI	TGATCA	1 cut(s)	1239
BcnI	CCSGG	6 cut(s)	389, 433, 502, 508, 509, 2420
BcoDI	GTCTC	4 cut(s)	136, 452, 881, 988
BfaI	CTAG	5 cut(s)	819, 1079, 1803, 1964, 2070
BfmI	CTRYAG	3 cut(s)	1160, 1291, 2379
BfoI	RGCGCY	1 cut(s)	620
BfuAI	ACCTGC	1 cut(s)	1522
BfuI	GTATCC	1 cut(s)	961
BglI	GCCNNNNNGGC	2 cut(s)	502, 793
BglII	AGATCT	1 cut(s)	275
Bme18I	GGWCC	2 cut(s)	371, 1839
BmeT110I	CYCGRG	4 cut(s)	36, 507, 533, 578
BmsI	GCATC	6 cut(s)	1526, 1736, 1754, 1976, 2007, 2151
BoxI	GACNNNNGTC	1 cut(s)	1219
BpiI	GAAGAC	1 cut(s)	1593
BpmI	CTGGAG	1 cut(s)	1497
BpuEI	CTTGAG	1 cut(s)	1346
BpuMI	CCSGG	6 cut(s)	389, 433, 502, 508, 509, 2420
BsaHI	GRCGYC	1 cut(s)	617
BsaI	GGTCTC	2 cut(s)	452, 881
BsaWI	WCCGGW	1 cut(s)	559
Bsc4I	CCNNNNNNNGG	9 cut(s)	368, 507, 508, 559, 950, 1313, 1614, 1763, 1984
Bse118I	RCCGGY	2 cut(s)	559, 2119
Bse1I	ACTGG	5 cut(s)	468, 1132, 1247, 1661, 1834
Bse3DI	GCAATG	3 cut(s)	954, 1537, 1640
BseBI	CCWGG	8 cut(s)	369, 418, 760, 858, 1609, 1764, 2300, 2316
BseGI	GGATG	2 cut(s)	1566, 1745
BseLI	CCNNNNNNNGG	9 cut(s)	368, 507, 508, 559, 950, 1313, 1614, 1763, 1984
BseMI	GCAATG	3 cut(s)	954, 1537, 1640
BseMII	CTCAG	3 cut(s)	257, 859, 2349
BseNI	ACTGG	5 cut(s)	468, 1132, 1247, 1661, 1834
BseRI	GAGGAG	3 cut(s)	115, 661, 782
BseSI	GKGCMC	5 cut(s)	550, 693, 1064, 1866, 2211
BseXI	GCAGC	7 cut(s)	477, 623, 1258, 1441, 2011, 2229, 2388
BseYI	CCCAGC	3 cut(s)	522, 604, 719
BsgI	GTGCAG	2 cut(s)	149, 1361
Bsh1236I	CGCG	4 cut(s)	71, 585, 748, 2334
BshNI	GGYRCC	1 cut(s)	616
BshTI	ACCGGT	1 cut(s)	559
BsiHKAI	GWGCWC	2 cut(s)	846, 1866
BsiHKCI	CYCGRG	4 cut(s)	36, 507, 533, 578
BsiSI	CCGG	9 cut(s)	389, 432, 453, 502, 508, 560, 944, 2120, 2419
BslFI	GGGAC	5 cut(s)	371, 586, 736, 1651, 2297
BslI	CCNNNNNNNGG	9 cut(s)	368, 507, 508, 559, 950, 1313, 1614, 1763, 1984
BsmAI	GTCTC	4 cut(s)	136, 452, 881, 988
BsmFI	GGGAC	5 cut(s)	371, 586, 736, 1651, 2297
BsmI	GAATGC	1 cut(s)	2279
Bso31I	GGTCTC	2 cut(s)	452, 881
BsoBI	CYCGRG	4 cut(s)	36, 507, 533, 578
Bsp120I	GGGCCC	4 cut(s)	546, 689, 1060, 2207
Bsp1286I	GDGCHC	7 cut(s)	550, 693, 735, 846, 1064, 1866, 2211
Bsp143I	GATC	5 cut(s)	275, 529, 1037, 1239, 1926
Bsp19I	CCATGG	2 cut(s)	374, 694
BspCNI	CTCAG	3 cut(s)	256, 858, 2350
BspFNI	CGCG	4 cut(s)	71, 585, 748, 2334
BspHI	TCATGA	1 cut(s)	1149
BspMAI	CTGCAG	1 cut(s)	2383
BspMI	ACCTGC	1 cut(s)	1522
BspPI	GGATC	2 cut(s)	1032, 1045
BspQI	GCTCTTC	1 cut(s)	1559
BspT107I	GGYRCC	1 cut(s)	616
BspTNI	GGTCTC	2 cut(s)	452, 881
BsrDI	GCAATG	3 cut(s)	954, 1537, 1640
BsrFI	RCCGGY	2 cut(s)	559, 2119
BsrI	ACTGG	5 cut(s)	468, 1132, 1247, 1661, 1834
BssAI	RCCGGY	2 cut(s)	559, 2119
BssMI	GATC	5 cut(s)	275, 529, 1037, 1239, 1926
BssNI	GRCGYC	1 cut(s)	617
BssSI	CACGAG	1 cut(s)	1843
BssT1I	CCWWGG	3 cut(s)	374, 694, 2388
Bst2BI	CACGAG	1 cut(s)	1843
Bst2UI	CCWGG	8 cut(s)	369, 418, 760, 858, 1609, 1764, 2300, 2316
Bst4CI	ACNGT	3 cut(s)	600, 991, 2311
Bst6I	CTCTTC	3 cut(s)	638, 668, 1559
BstACI	GRCGYC	1 cut(s)	617
BstC8I	GCNNGC	4 cut(s)	550, 1918, 2022, 2379
BstDEI	CTNAG	8 cut(s)	243, 423, 845, 1595, 1772, 1881, 2358, 2367
BstDSI	CCRYGG	3 cut(s)	374, 694, 746
BstENI	CCTNNNNNAGG	1 cut(s)	1612
BstF5I	GGATG	2 cut(s)	1566, 1745
BstFNI	CGCG	4 cut(s)	71, 585, 748, 2334
BstH2I	RGCGCY	1 cut(s)	620
BstHHI	GCGC	3 cut(s)	283, 585, 619
BstKTI	GATC	5 cut(s)	278, 532, 1040, 1242, 1929
BstMAI	GTCTC	4 cut(s)	136, 452, 881, 988
BstMBI	GATC	5 cut(s)	275, 529, 1037, 1239, 1926
BstMWI	GCNNNNNNNGC	8 cut(s)	502, 511, 545, 614, 739, 793, 1193, 2021
BstNI	CCWGG	8 cut(s)	369, 418, 760, 858, 1609, 1764, 2300, 2316
BstNSI	RCATGY	2 cut(s)	1553, 1920
BstPAI	GACNNNNGTC	1 cut(s)	1219
BstSFI	CTRYAG	3 cut(s)	1160, 1291, 2379
BstSLI	GKGCMC	5 cut(s)	550, 693, 1064, 1866, 2211
BstUI	CGCG	4 cut(s)	71, 585, 748, 2334
BstV1I	GCAGC	7 cut(s)	477, 623, 1258, 1441, 2011, 2229, 2388
BstV2I	GAAGAC	1 cut(s)	1593
BstX2I	RGATCY	2 cut(s)	275, 1037
BstXI	CCANNNNNNTGG	1 cut(s)	375
BstYI	RGATCY	2 cut(s)	275, 1037
BsuI	GTATCC	1 cut(s)	961
BtgI	CCRYGG	3 cut(s)	374, 694, 746
BtgZI	GCGATG	1 cut(s)	2030
BtsCI	GGATG	2 cut(s)	1566, 1745
BtsI	GCAGTG	1 cut(s)	1994
BtsIMutI	CAGTG	7 cut(s)	475, 996, 1125, 1254, 1654, 1994, 2307
BveI	ACCTGC	1 cut(s)	1522
Cac8I	GCNNGC	4 cut(s)	550, 1918, 2022, 2379
CciI	TCATGA	1 cut(s)	1149
CfoI	GCGC	3 cut(s)	283, 585, 619
Cfr10I	RCCGGY	2 cut(s)	559, 2119
Cfr42I	CCGCGG	1 cut(s)	749
Cfr9I	CCCGGG	1 cut(s)	507
CseI	GACGC	1 cut(s)	1686
Csp6I	GTAC	7 cut(s)	228, 265, 575, 957, 1511, 1641, 1827
CspAI	ACCGGT	1 cut(s)	559
CviQI	GTAC	7 cut(s)	228, 265, 575, 957, 1511, 1641, 1827
DdeI	CTNAG	8 cut(s)	243, 423, 845, 1595, 1772, 1881, 2358, 2367
DinI	GGCGCC	1 cut(s)	618
DpnI	GATC	5 cut(s)	277, 531, 1039, 1241, 1928
DpnII	GATC	5 cut(s)	275, 529, 1037, 1239, 1926
DraIII	CACNNNGTG	1 cut(s)	2272
EaeI	YGGCCR	2 cut(s)	478, 756
Eam1104I	CTCTTC	3 cut(s)	638, 668, 1559
EarI	CTCTTC	3 cut(s)	638, 668, 1559
EciI	GGCGGA	2 cut(s)	185, 428
Ecl136II	GAGCTC	1 cut(s)	844
Eco130I	CCWWGG	3 cut(s)	374, 694, 2388
Eco147I	AGGCCT	1 cut(s)	2034
Eco24I	GRGCYC	6 cut(s)	550, 693, 735, 846, 1064, 2211
Eco31I	GGTCTC	2 cut(s)	452, 881
Eco32I	GATATC	2 cut(s)	486, 1386
Eco47I	GGWCC	2 cut(s)	371, 1839
Eco53kI	GAGCTC	1 cut(s)	844
Eco57I	CTGAAG	2 cut(s)	1491, 2392
Eco88I	CYCGRG	4 cut(s)	36, 507, 533, 578
EcoICRI	GAGCTC	1 cut(s)	844
EcoNI	CCTNNNNNAGG	1 cut(s)	1612
EcoO109I	RGGNCCY	3 cut(s)	690, 1060, 2208
EcoRII	CCWGG	8 cut(s)	367, 416, 758, 856, 1607, 1762, 2298, 2314
EcoRV	GATATC	2 cut(s)	486, 1386
EcoT14I	CCWWGG	3 cut(s)	374, 694, 2388
EcoT22I	ATGCAT	1 cut(s)	1729
EcoT38I	GRGCYC	6 cut(s)	550, 693, 735, 846, 1064, 2211
EgeI	GGCGCC	1 cut(s)	618
EheI	GGCGCC	1 cut(s)	618
ErhI	CCWWGG	3 cut(s)	374, 694, 2388
FalI	AAGNNNNNCTT	2 cut(s)	1185, 1217
FaqI	GGGAC	5 cut(s)	371, 586, 736, 1651, 2297
FauI	CCCGC	2 cut(s)	557, 2327
FauNDI	CATATG	1 cut(s)	831
FbaI	TGATCA	1 cut(s)	1239
FokI	GGATG	2 cut(s)	1573, 1732
FriOI	GRGCYC	6 cut(s)	550, 693, 735, 846, 1064, 2211
FspBI	CTAG	5 cut(s)	819, 1079, 1803, 1964, 2070
GlaI	GCGC	3 cut(s)	282, 584, 618
GsaI	CCCAGC	3 cut(s)	526, 608, 723
GsuI	CTGGAG	1 cut(s)	1497
HaeII	RGCGCY	1 cut(s)	620
HapII	CCGG	9 cut(s)	389, 432, 453, 502, 508, 560, 944, 2120, 2419
HgaI	GACGC	1 cut(s)	1686
HhaI	GCGC	3 cut(s)	283, 585, 619
Hin1I	GRCGYC	1 cut(s)	617
Hin6I	GCGC	3 cut(s)	281, 583, 617
HinP1I	GCGC	3 cut(s)	281, 583, 617
HinfI	GANTC	6 cut(s)	392, 473, 656, 1122, 1706, 2354
HpaII	CCGG	9 cut(s)	389, 432, 453, 502, 508, 560, 944, 2120, 2419
HphI	GGTGA	4 cut(s)	652, 1251, 2245, 2446
Hpy166II	GTNNAC	7 cut(s)	320, 575, 1075, 1214, 1842, 1864, 2236
Hpy188III	TCNNGA	9 cut(s)	38, 533, 1005, 1041, 1150, 1325, 1749, 1790, 2327
Hpy8I	GTNNAC	7 cut(s)	320, 575, 1075, 1214, 1842, 1864, 2236
HpyAV	CCTTC	7 cut(s)	170, 420, 630, 646, 1787, 2221, 2416
HpyCH4III	ACNGT	3 cut(s)	600, 991, 2311
HpyCH4IV	ACGT	2 cut(s)	2047, 2252
HpyF10VI	GCNNNNNNNGC	8 cut(s)	502, 511, 545, 614, 739, 793, 1193, 2021
HpyF3I	CTNAG	8 cut(s)	243, 423, 845, 1595, 1772, 1881, 2358, 2367
HpySE526I	ACGT	2 cut(s)	2047, 2252
Hsp92I	GRCGYC	1 cut(s)	617
HspAI	GCGC	3 cut(s)	281, 583, 617
KasI	GGCGCC	1 cut(s)	616
Ksp22I	TGATCA	1 cut(s)	1239
KspI	CCGCGG	1 cut(s)	749
Kzo9I	GATC	5 cut(s)	275, 529, 1037, 1239, 1926
LguI	GCTCTTC	1 cut(s)	1559
LmnI	GCTCC	6 cut(s)	314, 511, 730, 1087, 1478, 2374
Lsp1109I	GCAGC	7 cut(s)	477, 623, 1258, 1441, 2011, 2229, 2388
LweI	GCATC	6 cut(s)	1526, 1736, 1754, 1976, 2007, 2151
MaeI	CTAG	5 cut(s)	819, 1079, 1803, 1964, 2070
MaeII	ACGT	2 cut(s)	2047, 2252
MaeIII	GTNAC	4 cut(s)	1009, 1257, 1876, 2174
MalI	GATC	5 cut(s)	277, 531, 1039, 1241, 1928
MboI	GATC	5 cut(s)	275, 529, 1037, 1239, 1926
MboII	GAAGA	6 cut(s)	75, 405, 655, 685, 1576, 1593
MfeI	CAATTG	1 cut(s)	1266
MflI	RGATCY	2 cut(s)	275, 1037
MhlI	GDGCHC	7 cut(s)	550, 693, 735, 846, 1064, 1866, 2211
MlsI	TGGCCA	1 cut(s)	480
MluI	ACGCGT	1 cut(s)	69
MluNI	TGGCCA	1 cut(s)	480
Mly113I	GGCGCC	1 cut(s)	617
MlyI	GAGTC	3 cut(s)	401, 665, 1116
MmeI	TCCRAC	4 cut(s)	369, 1258, 1933, 2181
Mox20I	TGGCCA	1 cut(s)	480
Mph1103I	ATGCAT	1 cut(s)	1729
MscI	TGGCCA	1 cut(s)	480
MseI	TTAA	2 cut(s)	1140, 1850
MslI	CAYNNNNRTG	2 cut(s)	1679, 1883
Msp20I	TGGCCA	1 cut(s)	480
MspA1I	CMGCKG	4 cut(s)	608, 614, 748, 2401
MspI	CCGG	9 cut(s)	389, 432, 453, 502, 508, 560, 944, 2120, 2419
MunI	CAATTG	1 cut(s)	1266
Mva1269I	GAATGC	1 cut(s)	2279
MvaI	CCWGG	8 cut(s)	369, 418, 760, 858, 1609, 1764, 2300, 2316
MvnI	CGCG	4 cut(s)	71, 585, 748, 2334
MwoI	GCNNNNNNNGC	8 cut(s)	502, 511, 545, 614, 739, 793, 1193, 2021
NarI	GGCGCC	1 cut(s)	617
NciI	CCSGG	6 cut(s)	389, 433, 502, 508, 509, 2420
NcoI	CCATGG	2 cut(s)	374, 694
NdeI	CATATG	1 cut(s)	831
NdeII	GATC	5 cut(s)	275, 529, 1037, 1239, 1926
NmuCI	GTSAC	3 cut(s)	1009, 1257, 1876
NsiI	ATGCAT	1 cut(s)	1729
NspI	RCATGY	2 cut(s)	1553, 1920
PaeI	GCATGC	1 cut(s)	1920
PaeR7I	CTCGAG	1 cut(s)	533
PagI	TCATGA	1 cut(s)	1149
PceI	AGGCCT	1 cut(s)	2034
PciSI	GCTCTTC	1 cut(s)	1559
PctI	GAATGC	1 cut(s)	2279
PfeI	GAWTC	3 cut(s)	473, 1706, 2354
PflFI	GACNNNGTC	1 cut(s)	363
PflMI	CCANNNNNTGG	1 cut(s)	1984
PfoI	TCCNGGA	2 cut(s)	387, 2298
PinAI	ACCGGT	1 cut(s)	559
PleI	GAGTC	3 cut(s)	400, 664, 1116
PluTI	GGCGCC	1 cut(s)	620
PpsI	GAGTC	3 cut(s)	400, 664, 1116
PshAI	GACNNNNGTC	1 cut(s)	1219
Psp124BI	GAGCTC	1 cut(s)	846
Psp6I	CCWGG	8 cut(s)	367, 416, 758, 856, 1607, 1762, 2298, 2314
PspFI	CCCAGC	3 cut(s)	522, 604, 719
PspGI	CCWGG	8 cut(s)	367, 416, 758, 856, 1607, 1762, 2298, 2314
PspOMI	GGGCCC	4 cut(s)	546, 689, 1060, 2207
PstI	CTGCAG	1 cut(s)	2383
PsuI	RGATCY	2 cut(s)	275, 1037
PsyI	GACNNNGTC	1 cut(s)	363
PvuII	CAGCTG	1 cut(s)	2401
RsaI	GTAC	7 cut(s)	229, 266, 576, 958, 1512, 1642, 1828
RsaNI	GTAC	7 cut(s)	228, 265, 575, 957, 1511, 1641, 1827
RseI	CAYNNNNRTG	2 cut(s)	1679, 1883
SacI	GAGCTC	1 cut(s)	846
SacII	CCGCGG	1 cut(s)	749
SapI	GCTCTTC	1 cut(s)	1559
SaqAI	TTAA	2 cut(s)	1140, 1850
Sau3AI	GATC	5 cut(s)	275, 529, 1037, 1239, 1926
SchI	GAGTC	3 cut(s)	401, 665, 1116
SduI	GDGCHC	7 cut(s)	550, 693, 735, 846, 1064, 1866, 2211
SfaNI	GCATC	6 cut(s)	1526, 1736, 1754, 1976, 2007, 2151
SfcI	CTRYAG	3 cut(s)	1160, 1291, 2379
SfoI	GGCGCC	1 cut(s)	618
Sfr274I	CTCGAG	1 cut(s)	533
Sfr303I	CCGCGG	1 cut(s)	749
SgrBI	CCGCGG	1 cut(s)	749
SinI	GGWCC	2 cut(s)	371, 1839
SlaI	CTCGAG	1 cut(s)	533
SmaI	CCCGGG	1 cut(s)	509
SmiMI	CAYNNNNRTG	2 cut(s)	1679, 1883
SmlI	CTYRAG	2 cut(s)	533, 1325
SmoI	CTYRAG	2 cut(s)	533, 1325
SphI	GCATGC	1 cut(s)	1920
SseBI	AGGCCT	1 cut(s)	2034
SspDI	GGCGCC	1 cut(s)	616
SspI	AATATT	1 cut(s)	2077
SspMI	CTAG	5 cut(s)	819, 1079, 1803, 1964, 2070
SstI	GAGCTC	1 cut(s)	846
StuI	AGGCCT	1 cut(s)	2034
StyI	CCWWGG	3 cut(s)	374, 694, 2388
TaaI	ACNGT	3 cut(s)	600, 991, 2311
TaiI	ACGT	2 cut(s)	2050, 2255
TaqI	TCGA	8 cut(s)	76, 338, 534, 671, 914, 1573, 1709, 1777
TatI	WGTACW	1 cut(s)	227
TauI	GCSGC	7 cut(s)	496, 611, 617, 683, 719, 758, 1994
TfiI	GAWTC	3 cut(s)	473, 1706, 2354
Tru1I	TTAA	2 cut(s)	1140, 1850
Tru9I	TTAA	2 cut(s)	1140, 1850
TscAI	CASTG	7 cut(s)	475, 996, 1132, 1254, 1661, 2001, 2314
TseFI	GTSAC	3 cut(s)	1009, 1257, 1876
TseI	GCWGC	7 cut(s)	490, 611, 1271, 1454, 2024, 2217, 2401
Tsp45I	GTSAC	3 cut(s)	1009, 1257, 1876
TspDTI	ATGAA	5 cut(s)	280, 848, 1166, 1577, 1996
TspGWI	ACGGA	3 cut(s)	743, 1416, 1617
TspMI	CCCGGG	1 cut(s)	507
TspRI	CASTG	7 cut(s)	475, 996, 1132, 1254, 1661, 2001, 2314
Tth111I	GACNNNGTC	1 cut(s)	363
Van91I	CCANNNNNTGG	1 cut(s)	1984
VneI	GTGCAC	1 cut(s)	1862
VpaK11BI	GGWCC	2 cut(s)	371, 1839
XagI	CCTNNNNNAGG	1 cut(s)	1612
XapI	RAATTY	1 cut(s)	1112
XceI	RCATGY	2 cut(s)	1553, 1920
XcmI	CCANNNNNNNNNTGG	1 cut(s)	701
XhoI	CTCGAG	1 cut(s)	533
XmaI	CCCGGG	1 cut(s)	507
XspI	CTAG	5 cut(s)	819, 1079, 1803, 1964, 2070
Zsp2I	ATGCAT	1 cut(s)	1729

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.