Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0007879

Physical Location & Seq

Genomic Coordinates Forward (+)

36387305 .. 36394963

Gene Structure 7659 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG327500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2115 bp

ATGTCGAAGTCGGACCCTAAACCCACTAGGCCGCGACCCGGACCGTGGCCCCCGGTTCCGGAGGGCTCACCACTGCCGCCCTCGTCCTGGGCCAAGAAGACCGGGTTCCGGCCCAAGTTCTCCGGCGAGACCAATGCCAGTGATTCCGGCCAGATAGCCTTGCCCCCGCCCCGGCCGAACCGGGAGCCCGAGCCCGATCTCGAGGCCGGCCGGGTGAGGAGCCAACCGAAGGCGGCGAATGGGGAGACGGCTCCGGCGCCGGTAGCGAAGCCGGCTGCTCCGAGTGGGGATAAGGATCAGACGGTGGTGGTGAAGAGGAGGAAGGAGTCCGATGGTGGGTCGAAGAATGCGGGCCACGGAACCAATGGGCAAGCGGCGGCGGTTCCGGCTGAGCCCAATTCGCAGCCGAGGAGGGCGGCGAGGAGTGAAGAAGTGGTGGATGTTTTGCCTAATAGTGTGGATGATGATGGGTATGTGGGCAGGAGTTCACATATGAAGTATGAGCTGAGAGACACGCCCGGGCTTGTTCCCATTGGTCTATATGGATTCCAGCATTATCTCTCCATATTGGGTTCGATAATTTTAATTCCACTCGTCATAGTTCCAGCAATGGGTGGTACTTATGAGGATACTGCAAACGTGGTATCGACAGTGCTCTTTGTTTCGGGAGTGACCACTCTCTTGCAAACGTCATTTGGATCAAGATTGCCCTTGATACAGGGCCCTTCATTTGTTTACCTAGCACCCGCTTTGGCAATAATCAATTCCCCGGAATTTCAAGGACTCAATGGAAATAATTTTAAGCATATCATGAAGGAGCTACAGGGGGCAGTAATAATAGGTTCAGCTTTTCAAGCAATACTTGGATATACTGGACTAATGTCATTTTTTTTGAGGTTGATCAATCCAGTGGTTGTGTCACCAACAATTGCTGCTGTTGGACTTTCTTTCTACAGTTATGGTTTCCCATTAGTTGGTACTTGTCTTGAGATTGGTGCTGTGCAGATATTATTGGTCATTGCTTTTTCTCTTTACTTACGGAAGATATCTGTTTTTGGTCATCGTGTATTTCTAATATATGCAGTTCCATTGGGTCTGGCAATCACATGGGCAACTGCTTTCCTCCTAACTGAAGCTGGAGTATATAACTACAAAGGCTGTGATACAAATGTACCTGCATCGAACATAATTTCTGATCATTGCAGAAAGCATGTCTCGAGAATGAAGCACTGTCGAGTTGATACTTCTCATGCATTAAATTCTTCCCCATGGTTTAGGTTTCCTTATCCGTTACAATGGGGTACTCCTGTTTTCCACTGGAAAATGGCTATTGTTATGTGCGTGGTTTCAATTATCTCATCAGTGCATTCGGTTGGCTCATATCATGCTTCTTCACTATTGGTGGCATCCAGGCCTCCAACTCCTGGTGTTGTTAGTCGAGGGATCGGTCTTGAAGGTCTTTCCAGCATCTTGGCGGGTTTATGGGGTACTGGAACAGGGTCCACAAGTTTAACTGAAAATGTGCACACAATAGCTGTCACTAAGATGGGAAGCCGTAGAGCAGTTGAATTGGGTGCATGCCTCTTGATTGTCTTATCCCTTGTTGGTAAAGTTGGAGGGTTTCTTGCATCAATTCCCCAAGTCATGGTTGCAGCACTTCTGTGCTTCATGTGGGCGATGCTTGCTGCATTGGGTCTGTCAAATCTACGTTATAGCGAGGCTGGAAGCTCTCGGAATATTATCATTGTCGGGCTATCTTTGTTTTTCTCGCTGTCAATACCAGCATACTTTCAGCAATATGGCATCTCTCCAAACTCCAACTCATCTGTTCCAAGTTATTTTCAGCCATATATTGTGGCTTCTCATGGGCCCTTCCACAGCAAATATGGAGGGATGAACTATGTCCTCAACACATTATTTTCATTACACATGGTGATTGCATTCCTTGCGGCTGTTATCCTGGACAACACAGTACCTGGAAGTCGTCAAGAACGTGGTGTATATGTGTGGTCCGAACGTGAGGTTGCAAAGAGGGAGCCTGCTGTTGCCAAAGACTATGAGCTGCCCTTCAGAATTGGCCGGGTTTTCAGATGGGTGAAATGGGTTGGACTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005345 GO:0005350 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006855 GO:0006863 GO:0008150 GO:0008324 GO:0015075 GO:0015205 GO:0015207 GO:0015208 GO:0015210 GO:0015238 GO:0015291 GO:0015293 GO:0015294 GO:0015318 GO:0015851 GO:0015853 GO:0015854 GO:0015855 GO:0015857 GO:0015893 GO:0016020 GO:0022804 GO:0022857 GO:0022890 GO:0034220 GO:0035344 GO:0042221 GO:0042493 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:0072530 GO:0072531 GO:0098655 GO:0098657 GO:0098702 GO:0098710 GO:0098721 GO:0098739 GO:1903716 GO:1903791 GO:1904082 GO:1904823

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Xan_ur_permease

Protein Analysis

704

Amino Acids

75.77

Weight (kDa)

9.49

Isoelectric Point (pI)

43.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Xan_ur_permease	PF00860	180 - 597	4.9e-65	Permease family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007879)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G27810 AT2G27810 AT2G27810 AT2G27810
fragaria_vesca	FvH4_3g24260
malus_domestica	MD03G1135100.v1.1 MD11G1157800.v1.1
prunus_persica	Prupe.6G119500_v2.0.a1 Prupe.6G119500_v2.0.a1 Prupe.6G119500_v2.0.a1
pyrus_communis	pycom03g09100 pycom11g12810
rosa_chinensis	RchiOBHm_Chr5g0043401
rosa_laevigata	RLG00000034184
rosa_multiflora	Rmu_sc0000060.1_g000066 Rmu_sc0007797.1_g000001
rosa_roxburghii	Rroxscaffold_1G00037480
rosa_rugosa	Rorug05G0205700
rosa_samantha	Rh5AG291400 Rh5BG298000 Rh5CG327500 Rh5DG307400
rosa_wichuraiana	Rw0G010300 Rw5G027030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1183
AccB1I	GGYRCC	1 cut(s)	256
AccB7I	CCANNNNNTGG	3 cut(s)	974, 1424, 1645
AccII	CGCG	1 cut(s)	34
AccIII	TCCGGA	1 cut(s)	58
AclWI	GGATC	3 cut(s)	303, 706, 1451
AcoI	YGGCCR	4 cut(s)	148, 173, 208, 2077
AcsI	RAATTY	2 cut(s)	773, 1258
AcuI	CTGAAG	2 cut(s)	1152, 2053
AcyI	GRCGYC	1 cut(s)	257
AdeI	CACNNNGTG	1 cut(s)	1933
AfaI	GTAC	6 cut(s)	619, 979, 1173, 1303, 1489, 1974
AgsI	TTSAA	5 cut(s)	779, 854, 1350, 1454, 1568
AjnI	CCWGG	5 cut(s)	86, 1409, 1423, 1959, 1975
AleI	CACNNNNGTG	1 cut(s)	1660
AluBI	AGCT	7 cut(s)	505, 820, 848, 1136, 1535, 1728, 2062
AluI	AGCT	7 cut(s)	505, 820, 848, 1136, 1535, 1728, 2062
Alw21I	GWGCWC	2 cut(s)	657, 1527
Alw26I	GTCTC	4 cut(s)	122, 239, 504, 1219
Alw44I	GTGCAC	1 cut(s)	1523
AlwI	GGATC	3 cut(s)	303, 706, 1451
AlwNI	CAGNNNCTG	1 cut(s)	1976
Ama87I	CYCGRG	4 cut(s)	188, 200, 518, 1216
Aor13HI	TCCGGA	1 cut(s)	58
ApaI	GGGCCC	2 cut(s)	725, 1872
ApaLI	GTGCAC	1 cut(s)	1523
ApeKI	GCWGC	6 cut(s)	275, 403, 932, 1652, 1685, 2062
ApoI	RAATTY	2 cut(s)	773, 1258
AspLEI	GCGC	1 cut(s)	259
AsuHPI	GGTGA	6 cut(s)	60, 226, 322, 912, 1945, 2107
AvaI	CYCGRG	4 cut(s)	188, 200, 518, 1216
AvaII	GGWCC	4 cut(s)	13, 41, 1500, 2010
BaeGI	GKGCMC	3 cut(s)	725, 1527, 1872
BaeI	ACNNNNGTAYC	6 cut(s)	1155, 1155, 1188, 1188, 1293, 1326
BanI	GGYRCC	1 cut(s)	256
BanII	GRGCYC	6 cut(s)	68, 189, 195, 396, 725, 1872
BbsI	GAAGAC	1 cut(s)	104
Bbv12I	GWGCWC	2 cut(s)	657, 1527
BbvI	GCAGC	6 cut(s)	262, 415, 919, 1664, 1672, 2049
BccI	CCATC	4 cut(s)	326, 461, 1540, 2085
BceAI	ACGGC	2 cut(s)	264, 1539
BcgI	CGANNNNNNTGC	2 cut(s)	116, 150
BciT130I	CCWGG	5 cut(s)	88, 1411, 1425, 1961, 1977
BciVI	GTATCC	1 cut(s)	622
BclI	TGATCA	2 cut(s)	900, 1195
BcoDI	GTCTC	4 cut(s)	122, 239, 504, 1219
BfaI	CTAG	2 cut(s)	27, 740
BfmI	CTRYAG	2 cut(s)	821, 952
BfoI	RGCGCY	1 cut(s)	260
BfuAI	ACCTGC	1 cut(s)	1183
BfuI	GTATCC	1 cut(s)	622
BlpI	GCTNAGC	1 cut(s)	390
Bme18I	GGWCC	4 cut(s)	13, 41, 1500, 2010
BmeT110I	CYCGRG	4 cut(s)	188, 200, 518, 1216
BmsI	GCATC	6 cut(s)	1187, 1415, 1476, 1637, 1668, 1812
BoxI	GACNNNNGTC	1 cut(s)	880
BpiI	GAAGAC	1 cut(s)	104
BpmI	CTGGAG	1 cut(s)	1158
Bpu1102I	GCTNAGC	1 cut(s)	390
BpuEI	CTTGAG	1 cut(s)	1007
BsaBI	GATNNNNATC	1 cut(s)	294
BsaHI	GRCGYC	1 cut(s)	257
BsaI	GGTCTC	1 cut(s)	122
BsaJI	CCNNGG	9 cut(s)	44, 51, 87, 170, 355, 407, 518, 768, 1268
BsaWI	WCCGGW	1 cut(s)	58
Bse118I	RCCGGY	3 cut(s)	206, 259, 271
Bse1I	ACTGG	5 cut(s)	138, 877, 908, 1322, 1495
Bse3DI	GCAATG	3 cut(s)	615, 1017, 1198
Bse8I	GATNNNNATC	1 cut(s)	294
BseAI	TCCGGA	1 cut(s)	58
BseBI	CCWGG	5 cut(s)	88, 1411, 1425, 1961, 1977
BseDI	CCNNGG	9 cut(s)	44, 51, 87, 170, 355, 407, 518, 768, 1268
BseGI	GGATG	4 cut(s)	445, 466, 1406, 1899
BseJI	GATNNNNATC	1 cut(s)	294
BseMI	GCAATG	3 cut(s)	615, 1017, 1198
BseMII	CTCAG	2 cut(s)	381, 497
BseNI	ACTGG	5 cut(s)	138, 877, 908, 1322, 1495
BseRI	GAGGAG	4 cut(s)	232, 331, 424, 436
BseSI	GKGCMC	3 cut(s)	725, 1527, 1872
BseX3I	CGGCCG	2 cut(s)	173, 208
BseXI	GCAGC	6 cut(s)	262, 415, 919, 1664, 1672, 2049
BsgI	GTGCAG	1 cut(s)	1022
Bsh1236I	CGCG	1 cut(s)	34
Bsh1285I	CGRYCG	2 cut(s)	176, 211
BshNI	GGYRCC	1 cut(s)	256
BsiEI	CGRYCG	2 cut(s)	176, 211
BsiHKAI	GWGCWC	2 cut(s)	657, 1527
BsiHKCI	CYCGRG	4 cut(s)	188, 200, 518, 1216
BsmAI	GTCTC	4 cut(s)	122, 239, 504, 1219
BsmBI	CGTCTC	1 cut(s)	239
BsmI	GAATGC	3 cut(s)	352, 1366, 1940
Bso31I	GGTCTC	1 cut(s)	122
BsoBI	CYCGRG	4 cut(s)	188, 200, 518, 1216
Bsp120I	GGGCCC	2 cut(s)	721, 1868
Bsp1286I	GDGCHC	8 cut(s)	68, 189, 195, 396, 657, 725, 1527, 1872
Bsp13I	TCCGGA	1 cut(s)	58
Bsp143I	GATC	6 cut(s)	196, 295, 698, 900, 1195, 1443
Bsp1720I	GCTNAGC	1 cut(s)	390
Bsp19I	CCATGG	1 cut(s)	1268
BspCNI	CTCAG	2 cut(s)	382, 498
BspEI	TCCGGA	1 cut(s)	58
BspFNI	CGCG	1 cut(s)	34
BspHI	TCATGA	1 cut(s)	810
BspMI	ACCTGC	1 cut(s)	1183
BspPI	GGATC	3 cut(s)	303, 706, 1451
BspT107I	GGYRCC	1 cut(s)	256
BspTNI	GGTCTC	1 cut(s)	122
BsrDI	GCAATG	3 cut(s)	615, 1017, 1198
BsrFI	RCCGGY	3 cut(s)	206, 259, 271
BsrI	ACTGG	5 cut(s)	138, 877, 908, 1322, 1495
BssAI	RCCGGY	3 cut(s)	206, 259, 271
BssECI	CCNNGG	9 cut(s)	44, 51, 87, 170, 355, 407, 518, 768, 1268
BssMI	GATC	6 cut(s)	196, 295, 698, 900, 1195, 1443
BssNI	GRCGYC	1 cut(s)	257
BssT1I	CCWWGG	1 cut(s)	1268
Bst2UI	CCWGG	5 cut(s)	88, 1411, 1425, 1961, 1977
Bst4CI	ACNGT	6 cut(s)	45, 304, 652, 956, 1232, 1972
Bst6I	CTCTTC	1 cut(s)	308
BstACI	GRCGYC	1 cut(s)	257
BstAPI	GCANNNNNTGC	1 cut(s)	1946
BstC8I	GCNNGC	7 cut(s)	208, 273, 352, 372, 1579, 1683, 2040
BstDEI	CTNAG	3 cut(s)	390, 506, 1542
BstDSI	CCRYGG	3 cut(s)	44, 355, 1268
BstF5I	GGATG	4 cut(s)	445, 466, 1406, 1899
BstFNI	CGCG	1 cut(s)	34
BstH2I	RGCGCY	1 cut(s)	260
BstHHI	GCGC	1 cut(s)	259
BstKTI	GATC	6 cut(s)	199, 298, 701, 903, 1198, 1446
BstMAI	GTCTC	4 cut(s)	122, 239, 504, 1219
BstMBI	GATC	6 cut(s)	196, 295, 698, 900, 1195, 1443
BstMCI	CGRYCG	2 cut(s)	176, 211
BstMWI	GCNNNNNNNGC	7 cut(s)	263, 272, 386, 400, 854, 1682, 1946
BstNI	CCWGG	5 cut(s)	88, 1411, 1425, 1961, 1977
BstNSI	RCATGY	2 cut(s)	1214, 1581
BstPAI	GACNNNNGTC	1 cut(s)	880
BstSFI	CTRYAG	2 cut(s)	821, 952
BstSLI	GKGCMC	3 cut(s)	725, 1527, 1872
BstUI	CGCG	1 cut(s)	34
BstV1I	GCAGC	6 cut(s)	262, 415, 919, 1664, 1672, 2049
BstV2I	GAAGAC	1 cut(s)	104
BstXI	CCANNNNNNTGG	1 cut(s)	1471
BstZI	CGGCCG	2 cut(s)	173, 208
BsuI	GTATCC	1 cut(s)	622
BtgI	CCRYGG	3 cut(s)	44, 355, 1268
BtgZI	GCGATG	1 cut(s)	1691
BtsCI	GGATG	4 cut(s)	445, 466, 1406, 1899
BtsI	GCAGTG	1 cut(s)	71
BtsIMutI	CAGTG	7 cut(s)	71, 145, 657, 915, 1228, 1315, 1368
BveI	ACCTGC	1 cut(s)	1183
Cac8I	GCNNGC	7 cut(s)	208, 273, 352, 372, 1579, 1683, 2040
CaiI	CAGNNNCTG	1 cut(s)	1976
CciI	TCATGA	1 cut(s)	810
CfoI	GCGC	1 cut(s)	259
Cfr10I	RCCGGY	3 cut(s)	206, 259, 271
Cfr9I	CCCGGG	1 cut(s)	518
CpoI	CGGWCCG	1 cut(s)	41
Csp6I	GTAC	6 cut(s)	618, 978, 1172, 1302, 1488, 1973
CspI	CGGWCCG	1 cut(s)	41
CviQI	GTAC	6 cut(s)	618, 978, 1172, 1302, 1488, 1973
DdeI	CTNAG	3 cut(s)	390, 506, 1542
DinI	GGCGCC	1 cut(s)	258
DpnI	GATC	6 cut(s)	198, 297, 700, 902, 1197, 1445
DpnII	GATC	6 cut(s)	196, 295, 698, 900, 1195, 1443
DraIII	CACNNNGTG	1 cut(s)	1933
EaeI	YGGCCR	4 cut(s)	148, 173, 208, 2077
EagI	CGGCCG	2 cut(s)	173, 208
Eam1104I	CTCTTC	1 cut(s)	308
EarI	CTCTTC	1 cut(s)	308
EclXI	CGGCCG	2 cut(s)	173, 208
Eco130I	CCWWGG	1 cut(s)	1268
Eco147I	AGGCCT	1 cut(s)	1414
Eco24I	GRGCYC	6 cut(s)	68, 189, 195, 396, 725, 1872
Eco31I	GGTCTC	1 cut(s)	122
Eco32I	GATATC	1 cut(s)	1047
Eco47I	GGWCC	4 cut(s)	13, 41, 1500, 2010
Eco52I	CGGCCG	2 cut(s)	173, 208
Eco57I	CTGAAG	2 cut(s)	1152, 2053
Eco88I	CYCGRG	4 cut(s)	188, 200, 518, 1216
EcoO109I	RGGNCCY	3 cut(s)	721, 722, 1869
EcoRII	CCWGG	5 cut(s)	86, 1409, 1423, 1959, 1975
EcoRV	GATATC	1 cut(s)	1047
EcoT14I	CCWWGG	1 cut(s)	1268
EcoT22I	ATGCAT	1 cut(s)	1255
EcoT38I	GRGCYC	6 cut(s)	68, 189, 195, 396, 725, 1872
EgeI	GGCGCC	1 cut(s)	258
EheI	GGCGCC	1 cut(s)	258
ErhI	CCWWGG	1 cut(s)	1268
Esp3I	CGTCTC	1 cut(s)	239
FalI	AAGNNNNNCTT	2 cut(s)	846, 878
FauI	CCCGC	4 cut(s)	174, 343, 754, 1468
FauNDI	CATATG	1 cut(s)	492
FbaI	TGATCA	2 cut(s)	900, 1195
FokI	GGATG	4 cut(s)	452, 473, 1393, 1906
FriOI	GRGCYC	6 cut(s)	68, 189, 195, 396, 725, 1872
FseI	GGCCGGCC	1 cut(s)	210
FspBI	CTAG	2 cut(s)	27, 740
GlaI	GCGC	1 cut(s)	258
GsuI	CTGGAG	1 cut(s)	1158
HaeII	RGCGCY	1 cut(s)	260
HhaI	GCGC	1 cut(s)	259
Hin1I	GRCGYC	1 cut(s)	257
Hin6I	GCGC	1 cut(s)	257
HinP1I	GCGC	1 cut(s)	257
HinfI	GANTC	4 cut(s)	143, 326, 546, 783
HphI	GGTGA	6 cut(s)	60, 226, 322, 912, 1945, 2107
Hpy166II	GTNNAC	4 cut(s)	488, 736, 1503, 1525
Hpy188I	TCNGA	9 cut(s)	13, 282, 300, 331, 1195, 1734, 2014, 2072, 2090
Hpy8I	GTNNAC	4 cut(s)	488, 736, 1503, 1525
HpyAV	CCTTC	7 cut(s)	223, 316, 735, 808, 1448, 1882, 2077
HpyCH4III	ACNGT	6 cut(s)	45, 304, 652, 956, 1232, 1972
HpyCH4IV	ACGT	5 cut(s)	639, 689, 1708, 1993, 2017
HpyF10VI	GCNNNNNNNGC	7 cut(s)	263, 272, 386, 400, 854, 1682, 1946
HpyF3I	CTNAG	3 cut(s)	390, 506, 1542
HpySE526I	ACGT	5 cut(s)	639, 689, 1708, 1993, 2017
Hsp92I	GRCGYC	1 cut(s)	257
HspAI	GCGC	1 cut(s)	257
KasI	GGCGCC	1 cut(s)	256
Kpn2I	TCCGGA	1 cut(s)	58
KroI	GCCGGC	2 cut(s)	206, 271
KroNI	GCCGGC	2 cut(s)	208, 273
Ksp22I	TGATCA	2 cut(s)	900, 1195
Kzo9I	GATC	6 cut(s)	196, 295, 698, 900, 1195, 1443
LmnI	GCTCC	6 cut(s)	184, 219, 256, 283, 817, 2035
Lsp1109I	GCAGC	6 cut(s)	262, 415, 919, 1664, 1672, 2049
LweI	GCATC	6 cut(s)	1187, 1415, 1476, 1637, 1668, 1812
MaeI	CTAG	2 cut(s)	27, 740
MaeII	ACGT	5 cut(s)	639, 689, 1708, 1993, 2017
MaeIII	GTNAC	4 cut(s)	670, 918, 1290, 1537
MalI	GATC	6 cut(s)	198, 297, 700, 902, 1197, 1445
MboI	GATC	6 cut(s)	196, 295, 698, 900, 1195, 1443
MboII	GAAGA	7 cut(s)	109, 325, 355, 440, 1054, 1254, 1383
MfeI	CAATTG	1 cut(s)	927
MhlI	GDGCHC	8 cut(s)	68, 189, 195, 396, 657, 725, 1527, 1872
Mly113I	GGCGCC	1 cut(s)	257
MlyI	GAGTC	2 cut(s)	335, 777
MmeI	TCCRAC	5 cut(s)	919, 1442, 1594, 1842, 2086
Mph1103I	ATGCAT	1 cut(s)	1255
MroI	TCCGGA	1 cut(s)	58
MroNI	GCCGGC	2 cut(s)	206, 271
MseI	TTAA	5 cut(s)	584, 801, 1256, 1511, 2113
MslI	CAYNNNNRTG	2 cut(s)	1544, 1660
MunI	CAATTG	1 cut(s)	927
Mva1269I	GAATGC	3 cut(s)	352, 1366, 1940
MvaI	CCWGG	5 cut(s)	88, 1411, 1425, 1961, 1977
MvnI	CGCG	1 cut(s)	34
MwoI	GCNNNNNNNGC	7 cut(s)	263, 272, 386, 400, 854, 1682, 1946
NaeI	GCCGGC	2 cut(s)	208, 273
NarI	GGCGCC	1 cut(s)	257
NcoI	CCATGG	1 cut(s)	1268
NdeI	CATATG	1 cut(s)	492
NdeII	GATC	6 cut(s)	196, 295, 698, 900, 1195, 1443
NgoMIV	GCCGGC	2 cut(s)	206, 271
NmeAIII	GCCGAG	1 cut(s)	432
NmuCI	GTSAC	3 cut(s)	670, 918, 1537
NsiI	ATGCAT	1 cut(s)	1255
NspI	RCATGY	2 cut(s)	1214, 1581
OliI	CACNNNNGTG	1 cut(s)	1660
PaeI	GCATGC	1 cut(s)	1581
PaeR7I	CTCGAG	2 cut(s)	200, 1216
PagI	TCATGA	1 cut(s)	810
PceI	AGGCCT	1 cut(s)	1414
PcsI	WCGNNNNNNNCGW	1 cut(s)	1990
PctI	GAATGC	3 cut(s)	352, 1366, 1940
PdiI	GCCGGC	2 cut(s)	208, 273
PfeI	GAWTC	2 cut(s)	143, 546
PflMI	CCANNNNNTGG	3 cut(s)	974, 1424, 1645
PfoI	TCCNGGA	1 cut(s)	1959
PleI	GAGTC	2 cut(s)	334, 777
PluTI	GGCGCC	1 cut(s)	260
PpsI	GAGTC	2 cut(s)	334, 777
PshAI	GACNNNNGTC	1 cut(s)	880
Psp6I	CCWGG	5 cut(s)	86, 1409, 1423, 1959, 1975
PspGI	CCWGG	5 cut(s)	86, 1409, 1423, 1959, 1975
PspOMI	GGGCCC	2 cut(s)	721, 1868
PstNI	CAGNNNCTG	1 cut(s)	1976
RigI	GGCCGGCC	1 cut(s)	210
RsaI	GTAC	6 cut(s)	619, 979, 1173, 1303, 1489, 1974
RsaNI	GTAC	6 cut(s)	618, 978, 1172, 1302, 1488, 1973
RseI	CAYNNNNRTG	2 cut(s)	1544, 1660
Rsr2I	CGGWCCG	1 cut(s)	41
RsrII	CGGWCCG	1 cut(s)	41
SaqAI	TTAA	5 cut(s)	584, 801, 1256, 1511, 2113
Sau3AI	GATC	6 cut(s)	196, 295, 698, 900, 1195, 1443
SchI	GAGTC	2 cut(s)	335, 777
SduI	GDGCHC	8 cut(s)	68, 189, 195, 396, 657, 725, 1527, 1872
SfaNI	GCATC	6 cut(s)	1187, 1415, 1476, 1637, 1668, 1812
SfcI	CTRYAG	2 cut(s)	821, 952
SfoI	GGCGCC	1 cut(s)	258
Sfr274I	CTCGAG	2 cut(s)	200, 1216
SinI	GGWCC	4 cut(s)	13, 41, 1500, 2010
SlaI	CTCGAG	2 cut(s)	200, 1216
SmaI	CCCGGG	1 cut(s)	520
SmiMI	CAYNNNNRTG	2 cut(s)	1544, 1660
SmlI	CTYRAG	3 cut(s)	200, 986, 1216
SmoI	CTYRAG	3 cut(s)	200, 986, 1216
SphI	GCATGC	1 cut(s)	1581
SrfI	GCCCGGGC	1 cut(s)	520
SseBI	AGGCCT	1 cut(s)	1414
SspDI	GGCGCC	1 cut(s)	256
SspI	AATATT	1 cut(s)	1738
SspMI	CTAG	2 cut(s)	27, 740
StuI	AGGCCT	1 cut(s)	1414
StyI	CCWWGG	1 cut(s)	1268
TaaI	ACNGT	6 cut(s)	45, 304, 652, 956, 1232, 1972
TaiI	ACGT	5 cut(s)	642, 692, 1711, 1996, 2020
TaqI	TCGA	9 cut(s)	5, 201, 341, 575, 647, 1181, 1217, 1234, 1438
TaqII	GACCGA	1 cut(s)	1436
TauI	GCSGC	7 cut(s)	34, 79, 236, 377, 380, 419, 1952
TfiI	GAWTC	2 cut(s)	143, 546
Tru1I	TTAA	5 cut(s)	584, 801, 1256, 1511, 2113
Tru9I	TTAA	5 cut(s)	584, 801, 1256, 1511, 2113
TscAI	CASTG	7 cut(s)	78, 145, 657, 915, 1235, 1322, 1368
TseFI	GTSAC	3 cut(s)	670, 918, 1537
TseI	GCWGC	6 cut(s)	275, 403, 932, 1652, 1685, 2062
Tsp45I	GTSAC	3 cut(s)	670, 918, 1537
TspDTI	ATGAA	7 cut(s)	509, 717, 827, 1238, 1657, 1910, 1911
TspGWI	ACGGA	3 cut(s)	372, 1054, 1278
TspMI	CCCGGG	1 cut(s)	518
TspRI	CASTG	7 cut(s)	78, 145, 657, 915, 1235, 1322, 1368
Van91I	CCANNNNNTGG	3 cut(s)	974, 1424, 1645
VneI	GTGCAC	1 cut(s)	1523
VpaK11BI	GGWCC	4 cut(s)	13, 41, 1500, 2010
XapI	RAATTY	2 cut(s)	773, 1258
XceI	RCATGY	2 cut(s)	1214, 1581
XcmI	CCANNNNNNNNNTGG	2 cut(s)	362, 1883
XhoI	CTCGAG	2 cut(s)	200, 1216
XmaI	CCCGGG	1 cut(s)	518
XspI	CTAG	2 cut(s)	27, 740
Zsp2I	ATGCAT	1 cut(s)	1255

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.