Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0007879

Physical Location & Seq

Genomic Coordinates Forward (+)

37974297 .. 37980581

Gene Structure 6285 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000034184

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2124 bp

ATGTCAAACTCGGACCCTAAACCCAGTAGGCCGCGACCCGGACCGTGGCCCCCGGTTCCGGAGGGCTCACCACTGCAGCCCTCGTCTTGGGCCAAGAAGACCGGGTTCCGGCCCAAGTTCTCCGGCGAGACCAATGCCAGTGATTCCGGCCAGATAGCCTTGCCCCCGCCCCGGCCGCCCCGGCCGCCCCGGGAGCCCGAGCCCGATCTCGAGGCCGGCCGGGTTAGGAGCCAACCGAAGGCGGCGAATGGGGAGACGGCTCCGGCGCCGGTGGCGAAGCCGGCTGCTCCGAGTGGGGATAAGGATCAGACGGTGGTGGTGAAGAGGAGGAAGGAGTCTGATGGTGGGTCGAAGAATGCGGGCCACGGAACCAATGGGCAAGCGGCGGCGGTTCCGGCGGAGCCCAATTCGCAGCCGAGGAGGGCGGCGAGGAGTGAAGAAGTGGTGGATGTTTTGCCTAATAGTGGGGATGATGATGGGTATGCGGGCAGGAGTTCACATATGAAGTATGAGCTGAGAGACACGCCCGGGCTTGTTCCCATTGGTCTATATGGATTCCAGCATTATCTCTCCATATTGGGTTCGATAATTTTAATTCCACTCGTCATAGTTCCAGCAATGGGTGGTACTTATGAGGATACTGCAAATGTGGTATCGACAGTGCTCTTTGTTTCGGGAGTGACCACTCTCTTGCAAACATCGTTTGGGTCAAGATTGCCCTTGATACAGGGCCCTTCATTTGTTTACCTAGCACCTGCTTTGGCAATAATCAATTCCCCGGAATTCCAAGGGCTCAATGGAAATAATTTTAAGCATATCATGAAGGAGCTACAGGGGGCAGTAATAATAGGGTCAGCTTTTCAAGCAATACTTGGATATACTGGACTAATGTCATTGTTTTTGAGGTTGATCAATCCAGTGGTTGTGTCACCAACAATTGCTGCTGTTGGACTTTCTTTCTACAGTTATGGTTTCCCATTAGTTGGTACTTGTCTTGAGATTGGTGCTGTGCAGATATTATTGGTCATTGCTTTTTCTCTTTACTTACGGAAGATATCTGTTTTTGGTCATCGGGTATTTCTAATATATGCAGTTCCATTGGGTCTGGCAATCACATGGGCAACTGCTTTCCTCCTAACTGAAGCTGGAGTATATAACTACAAAGGCTGTGATACAAATGTACCTGCATCAAACATAATTTCTGATCATTGCAGAAAGCATGTGTCGAGAATGAAGCACTGTCGAGTTGATACTTCTCATGCATTAAATTCTTCCCCGTGGTTTAGGTTTCCTTATCCATTACAATGGGGTACTCCTGTTTTCCACTGGAAAATGGCTATTGTTATGTGCGTGGTTTCAATTATCTCATCAGTGGATTCGGTTGGCTCATATCATGCTTCTTCACTATTGGTGGCATCCAGGCCTCCAACTCCTGGTGTTGTTAGTCGAGGGATTGGTCTTGAAGGTCTTTCCAGCATCTTGGCGGGTTTATGGGGTACTGGAACAGGGTCCACAAGTTTAACTGAAAATGTGCACACAATAGCTGTCACTAAGATGGGAAGCCGTAGAGCAGTTGAATTGGGTGCATGCCTTTTGATTGTCTTATCCCTTGTTGGTAAAGTTGGAGGGTTTCTTGCATCAATTCCCCAAGTCATGGTTGCAGCACTTCTGTGCTTCATGTGGGCGATGCTTGCTGCATTGGGTCTGTCAAATCTACGTTATAGCGAGGCTGGAAGCTCTCGGAATATTATCATTGTCGGGTTATCTTTGTTTTTCTCGCTGTCAATACCAGCATACTTTCAGCAATATGGCATCTCTCCAAACTCCAACTCATCTGTTCCAAGTTATTTTCAGCCATATATTGTGGCTTCTCATGGGCCCTTCCGCAGCAAATATGGAGGGATGAACTATGTCCTCAACACATTATTTTCATTACACATGGTGATTGCATTCCTTGTGGCTGTTATCCTGGACAACACAGTACCTGGAAGTCGTCAAGAACGTGGTGTATATGTGTGGTCTGAACGTGAGGTTGCAAAGAGGGAGCCTGCCGTTGCCAAAGACTATGAGCTGCCCTTCAGAATTGGCCGGGTTTTCAGATGGGTGAAATGGGTTGGACTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005345 GO:0005350 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006855 GO:0006863 GO:0008150 GO:0008324 GO:0015075 GO:0015205 GO:0015207 GO:0015208 GO:0015210 GO:0015238 GO:0015291 GO:0015293 GO:0015294 GO:0015318 GO:0015851 GO:0015853 GO:0015854 GO:0015855 GO:0015857 GO:0015893 GO:0016020 GO:0022804 GO:0022857 GO:0022890 GO:0034220 GO:0035344 GO:0042221 GO:0042493 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:0072530 GO:0072531 GO:0098655 GO:0098657 GO:0098702 GO:0098710 GO:0098721 GO:0098739 GO:1903716 GO:1903791 GO:1904082 GO:1904823

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Xan_ur_permease

Protein Analysis

708

Amino Acids

76.03

Weight (kDa)

9.5

Isoelectric Point (pI)

45.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Xan_ur_permease	PF00860	183 - 600	3.2e-66	Permease family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0007879)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G27810 AT2G27810 AT2G27810 AT2G27810
fragaria_vesca	FvH4_3g24260
malus_domestica	MD03G1135100.v1.1 MD11G1157800.v1.1
prunus_persica	Prupe.6G119500_v2.0.a1 Prupe.6G119500_v2.0.a1 Prupe.6G119500_v2.0.a1
pyrus_communis	pycom03g09100 pycom11g12810
rosa_chinensis	RchiOBHm_Chr5g0043401
rosa_laevigata	RLG00000034184
rosa_multiflora	Rmu_sc0000060.1_g000066 Rmu_sc0007797.1_g000001
rosa_roxburghii	Rroxscaffold_1G00037480
rosa_rugosa	Rorug05G0205700
rosa_samantha	Rh5AG291400 Rh5BG298000 Rh5CG327500 Rh5DG307400
rosa_wichuraiana	Rw0G010300 Rw5G027030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	763
Acc36I	ACCTGC	2 cut(s)	763, 1192
AccB1I	GGYRCC	1 cut(s)	265
AccB7I	CCANNNNNTGG	3 cut(s)	983, 1433, 1654
AccII	CGCG	1 cut(s)	34
AccIII	TCCGGA	1 cut(s)	58
AclWI	GGATC	1 cut(s)	312
AcoI	YGGCCR	5 cut(s)	148, 173, 182, 217, 2086
AcsI	RAATTY	2 cut(s)	782, 1267
AcuI	CTGAAG	2 cut(s)	1161, 2062
AcyI	GRCGYC	1 cut(s)	266
AdeI	CACNNNGTG	1 cut(s)	1942
AfaI	GTAC	6 cut(s)	628, 988, 1182, 1312, 1498, 1983
AgsI	TTSAA	4 cut(s)	863, 1359, 1463, 1577
AjnI	CCWGG	4 cut(s)	1418, 1432, 1968, 1984
AleI	CACNNNNGTG	1 cut(s)	1669
AluBI	AGCT	7 cut(s)	514, 829, 857, 1145, 1544, 1737, 2071
AluI	AGCT	7 cut(s)	514, 829, 857, 1145, 1544, 1737, 2071
Alw21I	GWGCWC	2 cut(s)	666, 1536
Alw26I	GTCTC	3 cut(s)	122, 248, 513
Alw44I	GTGCAC	1 cut(s)	1532
AlwI	GGATC	1 cut(s)	312
AlwNI	CAGNNNCTG	1 cut(s)	1985
Ama87I	CYCGRG	4 cut(s)	189, 197, 209, 527
Aor13HI	TCCGGA	1 cut(s)	58
ApaI	GGGCCC	2 cut(s)	734, 1881
ApaLI	GTGCAC	1 cut(s)	1532
ApeKI	GCWGC	8 cut(s)	76, 284, 412, 941, 1661, 1694, 1887, 2071
ApoI	RAATTY	2 cut(s)	782, 1267
AspLEI	GCGC	1 cut(s)	268
AsuHPI	GGTGA	5 cut(s)	60, 331, 921, 1954, 2116
AvaI	CYCGRG	4 cut(s)	189, 197, 209, 527
AvaII	GGWCC	3 cut(s)	13, 41, 1509
BaeGI	GKGCMC	3 cut(s)	734, 1536, 1881
BaeI	ACNNNNGTAYC	6 cut(s)	1164, 1164, 1197, 1197, 1302, 1335
BanI	GGYRCC	1 cut(s)	265
BanII	GRGCYC	7 cut(s)	68, 198, 204, 405, 734, 795, 1881
BbsI	GAAGAC	1 cut(s)	104
Bbv12I	GWGCWC	2 cut(s)	666, 1536
BbvI	GCAGC	8 cut(s)	88, 271, 424, 928, 1673, 1681, 1899, 2058
BccI	CCATC	4 cut(s)	335, 470, 1549, 2094
BceAI	ACGGC	3 cut(s)	273, 1548, 2036
BcgI	CGANNNNNNTGC	2 cut(s)	116, 150
BciT130I	CCWGG	4 cut(s)	1420, 1434, 1970, 1986
BciVI	GTATCC	1 cut(s)	631
BclI	TGATCA	2 cut(s)	909, 1204
BcoDI	GTCTC	3 cut(s)	122, 248, 513
BfaI	CTAG	1 cut(s)	749
BfmI	CTRYAG	3 cut(s)	74, 830, 961
BfoI	RGCGCY	1 cut(s)	269
BfuAI	ACCTGC	2 cut(s)	763, 1192
BfuI	GTATCC	1 cut(s)	631
BglI	GCCNNNNNGGC	1 cut(s)	181
Bme18I	GGWCC	3 cut(s)	13, 41, 1509
BmeT110I	CYCGRG	4 cut(s)	189, 197, 209, 527
BmrI	ACTGGG	1 cut(s)	18
BmsI	GCATC	6 cut(s)	1196, 1424, 1485, 1646, 1677, 1821
BmuI	ACTGGG	1 cut(s)	18
BoxI	GACNNNNGTC	1 cut(s)	889
BpiI	GAAGAC	1 cut(s)	104
BpmI	CTGGAG	1 cut(s)	1167
BpuEI	CTTGAG	1 cut(s)	1016
BsaBI	GATNNNNATC	1 cut(s)	303
BsaHI	GRCGYC	1 cut(s)	266
BsaI	GGTCTC	1 cut(s)	122
BsaWI	WCCGGW	1 cut(s)	58
Bse118I	RCCGGY	3 cut(s)	215, 268, 280
Bse1I	ACTGG	6 cut(s)	24, 138, 886, 917, 1331, 1504
Bse3DI	GCAATG	3 cut(s)	624, 1026, 1207
Bse8I	GATNNNNATC	1 cut(s)	303
BseAI	TCCGGA	1 cut(s)	58
BseBI	CCWGG	4 cut(s)	1420, 1434, 1970, 1986
BseGI	GGATG	4 cut(s)	454, 475, 1415, 1908
BseJI	GATNNNNATC	1 cut(s)	303
BseMI	GCAATG	3 cut(s)	624, 1026, 1207
BseMII	CTCAG	1 cut(s)	506
BseNI	ACTGG	6 cut(s)	24, 138, 886, 917, 1331, 1504
BseRI	GAGGAG	3 cut(s)	340, 433, 445
BseSI	GKGCMC	3 cut(s)	734, 1536, 1881
BseX3I	CGGCCG	3 cut(s)	173, 182, 217
BseXI	GCAGC	8 cut(s)	88, 271, 424, 928, 1673, 1681, 1899, 2058
BsgI	GTGCAG	1 cut(s)	1031
Bsh1236I	CGCG	1 cut(s)	34
Bsh1285I	CGRYCG	3 cut(s)	176, 185, 220
BshNI	GGYRCC	1 cut(s)	265
BsiEI	CGRYCG	3 cut(s)	176, 185, 220
BsiHKAI	GWGCWC	2 cut(s)	666, 1536
BsiHKCI	CYCGRG	4 cut(s)	189, 197, 209, 527
BsmAI	GTCTC	3 cut(s)	122, 248, 513
BsmBI	CGTCTC	1 cut(s)	248
BsmI	GAATGC	2 cut(s)	361, 1949
Bso31I	GGTCTC	1 cut(s)	122
BsoBI	CYCGRG	4 cut(s)	189, 197, 209, 527
Bsp120I	GGGCCC	2 cut(s)	730, 1877
Bsp1286I	GDGCHC	9 cut(s)	68, 198, 204, 405, 666, 734, 795, 1536, 1881
Bsp13I	TCCGGA	1 cut(s)	58
Bsp143I	GATC	4 cut(s)	205, 304, 909, 1204
BspCNI	CTCAG	1 cut(s)	507
BspEI	TCCGGA	1 cut(s)	58
BspFNI	CGCG	1 cut(s)	34
BspHI	TCATGA	1 cut(s)	819
BspMAI	CTGCAG	1 cut(s)	78
BspMI	ACCTGC	2 cut(s)	763, 1192
BspPI	GGATC	1 cut(s)	312
BspT107I	GGYRCC	1 cut(s)	265
BspTNI	GGTCTC	1 cut(s)	122
BsrDI	GCAATG	3 cut(s)	624, 1026, 1207
BsrFI	RCCGGY	3 cut(s)	215, 268, 280
BsrI	ACTGG	6 cut(s)	24, 138, 886, 917, 1331, 1504
BssAI	RCCGGY	3 cut(s)	215, 268, 280
BssMI	GATC	4 cut(s)	205, 304, 909, 1204
BssNI	GRCGYC	1 cut(s)	266
BssT1I	CCWWGG	1 cut(s)	787
Bst2UI	CCWGG	4 cut(s)	1420, 1434, 1970, 1986
Bst4CI	ACNGT	6 cut(s)	45, 313, 661, 965, 1241, 1981
Bst6I	CTCTTC	1 cut(s)	317
BstACI	GRCGYC	1 cut(s)	266
BstC8I	GCNNGC	8 cut(s)	217, 282, 361, 381, 487, 1588, 1692, 2049
BstDEI	CTNAG	2 cut(s)	515, 1551
BstDSI	CCRYGG	3 cut(s)	44, 364, 1277
BstF5I	GGATG	4 cut(s)	454, 475, 1415, 1908
BstFNI	CGCG	1 cut(s)	34
BstH2I	RGCGCY	1 cut(s)	269
BstHHI	GCGC	1 cut(s)	268
BstKTI	GATC	4 cut(s)	208, 307, 912, 1207
BstMAI	GTCTC	3 cut(s)	122, 248, 513
BstMBI	GATC	4 cut(s)	205, 304, 909, 1204
BstMCI	CGRYCG	3 cut(s)	176, 185, 220
BstNI	CCWGG	4 cut(s)	1420, 1434, 1970, 1986
BstNSI	RCATGY	2 cut(s)	1223, 1590
BstPAI	GACNNNNGTC	1 cut(s)	889
BstSFI	CTRYAG	3 cut(s)	74, 830, 961
BstSLI	GKGCMC	3 cut(s)	734, 1536, 1881
BstUI	CGCG	1 cut(s)	34
BstV1I	GCAGC	8 cut(s)	88, 271, 424, 928, 1673, 1681, 1899, 2058
BstV2I	GAAGAC	1 cut(s)	104
BstXI	CCANNNNNNTGG	2 cut(s)	1305, 1480
BstZI	CGGCCG	3 cut(s)	173, 182, 217
BsuI	GTATCC	1 cut(s)	631
BtgI	CCRYGG	3 cut(s)	44, 364, 1277
BtgZI	GCGATG	1 cut(s)	1700
BtsCI	GGATG	4 cut(s)	454, 475, 1415, 1908
BtsI	GCAGTG	1 cut(s)	71
BtsIMutI	CAGTG	7 cut(s)	71, 145, 666, 924, 1237, 1324, 1377
BveI	ACCTGC	2 cut(s)	763, 1192
Cac8I	GCNNGC	8 cut(s)	217, 282, 361, 381, 487, 1588, 1692, 2049
CaiI	CAGNNNCTG	1 cut(s)	1985
CciI	TCATGA	1 cut(s)	819
CfoI	GCGC	1 cut(s)	268
Cfr10I	RCCGGY	3 cut(s)	215, 268, 280
Cfr9I	CCCGGG	2 cut(s)	189, 527
CpoI	CGGWCCG	1 cut(s)	41
Csp6I	GTAC	6 cut(s)	627, 987, 1181, 1311, 1497, 1982
CspI	CGGWCCG	1 cut(s)	41
CviQI	GTAC	6 cut(s)	627, 987, 1181, 1311, 1497, 1982
DdeI	CTNAG	2 cut(s)	515, 1551
DinI	GGCGCC	1 cut(s)	267
DpnI	GATC	4 cut(s)	207, 306, 911, 1206
DpnII	GATC	4 cut(s)	205, 304, 909, 1204
DraIII	CACNNNGTG	1 cut(s)	1942
EaeI	YGGCCR	5 cut(s)	148, 173, 182, 217, 2086
EagI	CGGCCG	3 cut(s)	173, 182, 217
Eam1104I	CTCTTC	1 cut(s)	317
EarI	CTCTTC	1 cut(s)	317
EciI	GGCGGA	1 cut(s)	413
EclXI	CGGCCG	3 cut(s)	173, 182, 217
Eco130I	CCWWGG	1 cut(s)	787
Eco147I	AGGCCT	1 cut(s)	1423
Eco24I	GRGCYC	7 cut(s)	68, 198, 204, 405, 734, 795, 1881
Eco31I	GGTCTC	1 cut(s)	122
Eco32I	GATATC	1 cut(s)	1056
Eco47I	GGWCC	3 cut(s)	13, 41, 1509
Eco52I	CGGCCG	3 cut(s)	173, 182, 217
Eco57I	CTGAAG	2 cut(s)	1161, 2062
Eco88I	CYCGRG	4 cut(s)	189, 197, 209, 527
EcoO109I	RGGNCCY	3 cut(s)	730, 731, 1878
EcoRI	GAATTC	1 cut(s)	782
EcoRII	CCWGG	4 cut(s)	1418, 1432, 1968, 1984
EcoRV	GATATC	1 cut(s)	1056
EcoT14I	CCWWGG	1 cut(s)	787
EcoT22I	ATGCAT	1 cut(s)	1264
EcoT38I	GRGCYC	7 cut(s)	68, 198, 204, 405, 734, 795, 1881
EgeI	GGCGCC	1 cut(s)	267
EheI	GGCGCC	1 cut(s)	267
ErhI	CCWWGG	1 cut(s)	787
Esp3I	CGTCTC	1 cut(s)	248
FalI	AAGNNNNNCTT	2 cut(s)	855, 887
FauI	CCCGC	4 cut(s)	174, 352, 478, 1477
FauNDI	CATATG	1 cut(s)	501
FbaI	TGATCA	2 cut(s)	909, 1204
FokI	GGATG	4 cut(s)	461, 482, 1402, 1915
FriOI	GRGCYC	7 cut(s)	68, 198, 204, 405, 734, 795, 1881
FseI	GGCCGGCC	1 cut(s)	219
FspBI	CTAG	1 cut(s)	749
GlaI	GCGC	1 cut(s)	267
GsuI	CTGGAG	1 cut(s)	1167
HaeII	RGCGCY	1 cut(s)	269
HhaI	GCGC	1 cut(s)	268
Hin1I	GRCGYC	1 cut(s)	266
Hin6I	GCGC	1 cut(s)	266
HinP1I	GCGC	1 cut(s)	266
HinfI	GANTC	4 cut(s)	143, 335, 555, 1376
HphI	GGTGA	5 cut(s)	60, 331, 921, 1954, 2116
Hpy166II	GTNNAC	4 cut(s)	497, 745, 1512, 1534
Hpy188I	TCNGA	9 cut(s)	13, 291, 309, 340, 1204, 1743, 2023, 2081, 2099
Hpy188III	TCNNGA	9 cut(s)	59, 209, 675, 711, 820, 995, 1227, 1460, 1997
Hpy8I	GTNNAC	4 cut(s)	497, 745, 1512, 1534
HpyAV	CCTTC	7 cut(s)	232, 325, 744, 817, 1457, 1891, 2086
HpyCH4III	ACNGT	6 cut(s)	45, 313, 661, 965, 1241, 1981
HpyCH4IV	ACGT	3 cut(s)	1717, 2002, 2026
HpyF3I	CTNAG	2 cut(s)	515, 1551
HpySE526I	ACGT	3 cut(s)	1717, 2002, 2026
Hsp92I	GRCGYC	1 cut(s)	266
HspAI	GCGC	1 cut(s)	266
KasI	GGCGCC	1 cut(s)	265
Kpn2I	TCCGGA	1 cut(s)	58
KroI	GCCGGC	2 cut(s)	215, 280
KroNI	GCCGGC	2 cut(s)	217, 282
Ksp22I	TGATCA	2 cut(s)	909, 1204
Kzo9I	GATC	4 cut(s)	205, 304, 909, 1204
LmnI	GCTCC	7 cut(s)	193, 228, 265, 292, 400, 826, 2044
Lsp1109I	GCAGC	8 cut(s)	88, 271, 424, 928, 1673, 1681, 1899, 2058
LweI	GCATC	6 cut(s)	1196, 1424, 1485, 1646, 1677, 1821
MaeI	CTAG	1 cut(s)	749
MaeII	ACGT	3 cut(s)	1717, 2002, 2026
MaeIII	GTNAC	3 cut(s)	679, 927, 1546
MalI	GATC	4 cut(s)	207, 306, 911, 1206
MboI	GATC	4 cut(s)	205, 304, 909, 1204
MboII	GAAGA	7 cut(s)	109, 334, 364, 449, 1063, 1263, 1392
MfeI	CAATTG	1 cut(s)	936
MhlI	GDGCHC	9 cut(s)	68, 198, 204, 405, 666, 734, 795, 1536, 1881
Mly113I	GGCGCC	1 cut(s)	266
MlyI	GAGTC	1 cut(s)	344
MmeI	TCCRAC	5 cut(s)	928, 1451, 1603, 1851, 2095
Mph1103I	ATGCAT	1 cut(s)	1264
MroI	TCCGGA	1 cut(s)	58
MroNI	GCCGGC	2 cut(s)	215, 280
MseI	TTAA	5 cut(s)	593, 810, 1265, 1520, 2122
MslI	CAYNNNNRTG	3 cut(s)	1303, 1553, 1669
MunI	CAATTG	1 cut(s)	936
Mva1269I	GAATGC	2 cut(s)	361, 1949
MvaI	CCWGG	4 cut(s)	1420, 1434, 1970, 1986
MvnI	CGCG	1 cut(s)	34
NaeI	GCCGGC	2 cut(s)	217, 282
NarI	GGCGCC	1 cut(s)	266
NdeI	CATATG	1 cut(s)	501
NdeII	GATC	4 cut(s)	205, 304, 909, 1204
NgoMIV	GCCGGC	2 cut(s)	215, 280
NmeAIII	GCCGAG	1 cut(s)	441
NmuCI	GTSAC	3 cut(s)	679, 927, 1546
NsiI	ATGCAT	1 cut(s)	1264
NspI	RCATGY	2 cut(s)	1223, 1590
OliI	CACNNNNGTG	1 cut(s)	1669
PaeI	GCATGC	1 cut(s)	1590
PaeR7I	CTCGAG	1 cut(s)	209
PagI	TCATGA	1 cut(s)	819
PaqCI	CACCTGC	1 cut(s)	763
PceI	AGGCCT	1 cut(s)	1423
PcsI	WCGNNNNNNNCGW	1 cut(s)	1999
PctI	GAATGC	2 cut(s)	361, 1949
PdiI	GCCGGC	2 cut(s)	217, 282
PfeI	GAWTC	3 cut(s)	143, 555, 1376
PflMI	CCANNNNNTGG	3 cut(s)	983, 1433, 1654
PfoI	TCCNGGA	1 cut(s)	1968
PleI	GAGTC	1 cut(s)	343
PluTI	GGCGCC	1 cut(s)	269
PpsI	GAGTC	1 cut(s)	343
PshAI	GACNNNNGTC	1 cut(s)	889
Psp6I	CCWGG	4 cut(s)	1418, 1432, 1968, 1984
PspGI	CCWGG	4 cut(s)	1418, 1432, 1968, 1984
PspOMI	GGGCCC	2 cut(s)	730, 1877
PstI	CTGCAG	1 cut(s)	78
PstNI	CAGNNNCTG	1 cut(s)	1985
RigI	GGCCGGCC	1 cut(s)	219
RsaI	GTAC	6 cut(s)	628, 988, 1182, 1312, 1498, 1983
RsaNI	GTAC	6 cut(s)	627, 987, 1181, 1311, 1497, 1982
RseI	CAYNNNNRTG	3 cut(s)	1303, 1553, 1669
Rsr2I	CGGWCCG	1 cut(s)	41
RsrII	CGGWCCG	1 cut(s)	41
SaqAI	TTAA	5 cut(s)	593, 810, 1265, 1520, 2122
Sau3AI	GATC	4 cut(s)	205, 304, 909, 1204
SchI	GAGTC	1 cut(s)	344
SduI	GDGCHC	9 cut(s)	68, 198, 204, 405, 666, 734, 795, 1536, 1881
SfaNI	GCATC	6 cut(s)	1196, 1424, 1485, 1646, 1677, 1821
SfcI	CTRYAG	3 cut(s)	74, 830, 961
SfiI	GGCCNNNNNGGCC	1 cut(s)	181
SfoI	GGCGCC	1 cut(s)	267
Sfr274I	CTCGAG	1 cut(s)	209
SgrAI	CRCCGGYG	1 cut(s)	268
SinI	GGWCC	3 cut(s)	13, 41, 1509
SlaI	CTCGAG	1 cut(s)	209
SmaI	CCCGGG	2 cut(s)	191, 529
SmiMI	CAYNNNNRTG	3 cut(s)	1303, 1553, 1669
SmlI	CTYRAG	2 cut(s)	209, 995
SmoI	CTYRAG	2 cut(s)	209, 995
SphI	GCATGC	1 cut(s)	1590
SrfI	GCCCGGGC	1 cut(s)	529
SseBI	AGGCCT	1 cut(s)	1423
SspDI	GGCGCC	1 cut(s)	265
SspI	AATATT	1 cut(s)	1747
SspMI	CTAG	1 cut(s)	749
StuI	AGGCCT	1 cut(s)	1423
StyI	CCWWGG	1 cut(s)	787
TaaI	ACNGT	6 cut(s)	45, 313, 661, 965, 1241, 1981
TaiI	ACGT	3 cut(s)	1720, 2005, 2029
TaqI	TCGA	7 cut(s)	210, 350, 584, 656, 1226, 1243, 1447
TauI	GCSGC	7 cut(s)	34, 178, 187, 245, 386, 389, 428
TfiI	GAWTC	3 cut(s)	143, 555, 1376
Tru1I	TTAA	5 cut(s)	593, 810, 1265, 1520, 2122
Tru9I	TTAA	5 cut(s)	593, 810, 1265, 1520, 2122
TscAI	CASTG	7 cut(s)	78, 145, 666, 924, 1244, 1331, 1377
TseFI	GTSAC	3 cut(s)	679, 927, 1546
TseI	GCWGC	8 cut(s)	76, 284, 412, 941, 1661, 1694, 1887, 2071
Tsp45I	GTSAC	3 cut(s)	679, 927, 1546
TspDTI	ATGAA	7 cut(s)	518, 726, 836, 1247, 1666, 1919, 1920
TspGWI	ACGGA	2 cut(s)	381, 1063
TspMI	CCCGGG	2 cut(s)	189, 527
TspRI	CASTG	7 cut(s)	78, 145, 666, 924, 1244, 1331, 1377
Van91I	CCANNNNNTGG	3 cut(s)	983, 1433, 1654
VneI	GTGCAC	1 cut(s)	1532
VpaK11BI	GGWCC	3 cut(s)	13, 41, 1509
XapI	RAATTY	2 cut(s)	782, 1267
XceI	RCATGY	2 cut(s)	1223, 1590
XcmI	CCANNNNNNNNNTGG	2 cut(s)	371, 794
XhoI	CTCGAG	1 cut(s)	209
XmaI	CCCGGG	2 cut(s)	189, 527
XspI	CTAG	1 cut(s)	749
Zsp2I	ATGCAT	1 cut(s)	1264

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.