Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0007879

Physical Location & Seq

Genomic Coordinates Forward (+)

39621320 .. 39628378

Gene Structure 7059 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G027030.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2115 bp

ATGTCGAACTCGGACCCTAAACCCACTAGGCCGCGACCCGGGCCGTGGCCCCCGGTCCCGGAGGGCTCACCACTGCCGCCCTCGTCCTGGGCCAAGAAGACCGGCTTCCGGCCCAAGTTCTCCGGCGAGACCAATGCCAGTGATTCCGGCCAGATAGCCTTGCCCCCGCCCCGCCCGACCCGGGAGCCCGAGCCCGATCTCGAGGCGGGCCGGGTGAGGGGCCAACCGAAGGCGGCGAATGGGGAGACGGCTCCGGCGCCGGTGGCGAAGCCGGCTGCTCCGAGTGGGGATAAGGATCAGGCGGTGGTGGTGAAGAGGAGGAAGGAGTCCGATGGTGGGTCGAAGAATGCGGGCCACGGAACCAATGGGCAAGCGGCGGCGGTTCCGGCTGAGCCCAATTCGCAGCCGAGGAGGGCGGCGAGGAGTGAAGAAGTGGTGGATGTTTTGCCTAGTAGTGTGGATGATGATGGGTATGTGGGCAGGAGTTCGCATATGAAGTATGAGCTCAGAGACACGCCCGGGCTTGTTCCCATTGGTCTATATGGATTCCAGCATTATCTCTCCATATTGGGTTCGATAATTTTAATTCCACTCGTCATAGTTCCAGCAATGGGTGGTACTTATGAGGACACTGCAAACGTGGTATCGACAGTGCTCTTTGTTTCGGGAGTGACCACTCTCTTGCAAACGTCGTTTGGATCAAGATTGCCCTTGATACAGGGCCCTTCATTTGTTTACCTAGCACCCGCTTTGGCAATAATCAATTCCCCGGGATTTCAAGGACTCAATGGAAATAATTTTAAGCATATCATGAAGGAGCTACAGGGGGCAGTAATAATAGGTTCAGCTTTTCAAGCAATACTTGGATATACTGGACTAATGTCATTGTTTTTGAGGTTGATCAATCCAGTGGTTGTGTCACCAACAATTGCTGCTGTTGGACTTTCTTTCTACAGTTATGGTTTCCCATTAGTTGGTACTTGTCTTGAGATTGGTGCTGTGCAGATATTATTGGTCATTGCTTTTTCTCTTTACTTACGGAAGATATCTGTTTTTGGTCATCGTGTATTTCTAATATATGCAGTTCCATTGGGTCTGGCAATCACATGGGCAACTGCTTTCCTCCTAACTGAAGCTGGAGTATATAACTACAAAGGCTGTGATACAAATGTACCTGCATCGAACATAATTTCTGATCATTGCAGAAAGCATGTGTCGAGAATGAAGCACTGTCGAGTTGATACTTCTCATGCATTAAATTCTTCCCCATGGTTTAGGTTTCCTTATCCGTTACAATGGGGTACTCCTGTTTTCCACTGGAAAATGGCTATTGTTATGTGTGTGGTTTCAATTATCTCATCAGTGGATTCGGTTGGCTCATATCATGCTTCTTCACTATTGGTGGCATCCAGGCCTCCAACTCCTGGTGTTGTTAGTCGAGGGATAGGTCTTGAAGGTCTTTCCAGCATCTTGGCGGGTTTATGGGGTACTGGAACAGGGTCCACAAGTTTAACTGAAAATGTGCACACAATAGCTGTCACTAAGATGGGAAGCCGTAGAGCAGTTGAATTGGGTGCATGCCTCTTGATTGTCTTATCCCTTGTTGGTAAAGTTGGAGGGTTTCTTGCATCAATTCCCCAAGTCATGGTTGCAGCACTTCTGTGCTTCATGTGGGCGATGCTTGCTGCATTGGGTCTGTCAAATCTACGTTATAGCGAGGCTGGAAGCTCTCGGAATATTATCATTGTCGGGCTATCTTTGTTTTTCTCGCTGTCAATACCAGCATATTTTCAGCAATATGGCATCTCTCCAAACTCCAACTCATCTGTTCCAAGTTATTTTCAGCCATATATTGTGGCTTCTCATGGGCCCTTCCGCAGCAAATATGGAGGGATGAACTATGTCCTCAACACATTATTTTCGTTACACATGGTGATTGCATTCCTTGTGGCCGTTATCCTGGACAACACAGTACCTGGAAGTCGTCAAGAACGTGGTGTATATGTGTGGTCCGAACGTGAGGTTGCAAAGAGGGAGCCTGCCGTTGCCAAAGACTATGAGCTGCCCTTCAGAATTGGCCGGGTTTTCAGATGGGTGAAATGGGTTGGACTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005345 GO:0005350 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006855 GO:0006863 GO:0008150 GO:0008324 GO:0015075 GO:0015205 GO:0015207 GO:0015208 GO:0015210 GO:0015238 GO:0015291 GO:0015293 GO:0015294 GO:0015318 GO:0015851 GO:0015853 GO:0015854 GO:0015855 GO:0015857 GO:0015893 GO:0016020 GO:0022804 GO:0022857 GO:0022890 GO:0034220 GO:0035344 GO:0042221 GO:0042493 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:0072530 GO:0072531 GO:0098655 GO:0098657 GO:0098702 GO:0098710 GO:0098721 GO:0098739 GO:1903716 GO:1903791 GO:1904082 GO:1904823

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Xan_ur_permease

Protein Analysis

704

Amino Acids

75.58

Weight (kDa)

9.5

Isoelectric Point (pI)

43.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Xan_ur_permease	PF00860	180 - 597	5.2e-66	Permease family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007879)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G27810 AT2G27810 AT2G27810 AT2G27810
fragaria_vesca	FvH4_3g24260
malus_domestica	MD03G1135100.v1.1 MD11G1157800.v1.1
prunus_persica	Prupe.6G119500_v2.0.a1 Prupe.6G119500_v2.0.a1 Prupe.6G119500_v2.0.a1
pyrus_communis	pycom03g09100 pycom11g12810
rosa_chinensis	RchiOBHm_Chr5g0043401
rosa_laevigata	RLG00000034184
rosa_multiflora	Rmu_sc0000060.1_g000066 Rmu_sc0007797.1_g000001
rosa_roxburghii	Rroxscaffold_1G00037480
rosa_rugosa	Rorug05G0205700
rosa_samantha	Rh5AG291400 Rh5BG298000 Rh5CG327500 Rh5DG307400
rosa_wichuraiana	Rw0G010300 Rw5G027030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1183
AccB1I	GGYRCC	1 cut(s)	256
AccB7I	CCANNNNNTGG	3 cut(s)	974, 1424, 1645
AccII	CGCG	1 cut(s)	34
AclWI	GGATC	2 cut(s)	303, 706
AcoI	YGGCCR	3 cut(s)	148, 1950, 2077
AcsI	RAATTY	1 cut(s)	1258
AcuI	CTGAAG	2 cut(s)	1152, 2053
AcyI	GRCGYC	1 cut(s)	257
AdeI	CACNNNGTG	1 cut(s)	1933
AfaI	GTAC	6 cut(s)	619, 979, 1173, 1303, 1489, 1974
AgsI	TTSAA	5 cut(s)	779, 854, 1350, 1454, 1568
AjnI	CCWGG	5 cut(s)	86, 1409, 1423, 1959, 1975
AleI	CACNNNNGTG	1 cut(s)	1660
AluBI	AGCT	7 cut(s)	505, 820, 848, 1136, 1535, 1728, 2062
AluI	AGCT	7 cut(s)	505, 820, 848, 1136, 1535, 1728, 2062
Alw21I	GWGCWC	3 cut(s)	507, 657, 1527
Alw26I	GTCTC	3 cut(s)	122, 239, 504
Alw44I	GTGCAC	1 cut(s)	1523
AlwI	GGATC	2 cut(s)	303, 706
AlwNI	CAGNNNCTG	1 cut(s)	1976
Ama87I	CYCGRG	6 cut(s)	38, 180, 188, 200, 518, 769
ApaI	GGGCCC	2 cut(s)	725, 1872
ApaLI	GTGCAC	1 cut(s)	1523
ApeKI	GCWGC	7 cut(s)	275, 403, 932, 1652, 1685, 1878, 2062
ApoI	RAATTY	1 cut(s)	1258
AspLEI	GCGC	1 cut(s)	259
AsuHPI	GGTGA	6 cut(s)	60, 226, 322, 912, 1945, 2107
AvaI	CYCGRG	6 cut(s)	38, 180, 188, 200, 518, 769
AvaII	GGWCC	4 cut(s)	13, 55, 1500, 2010
BaeGI	GKGCMC	3 cut(s)	725, 1527, 1872
BaeI	ACNNNNGTAYC	6 cut(s)	1155, 1155, 1188, 1188, 1293, 1326
BanI	GGYRCC	1 cut(s)	256
BanII	GRGCYC	7 cut(s)	68, 189, 195, 396, 507, 725, 1872
BbsI	GAAGAC	1 cut(s)	104
Bbv12I	GWGCWC	3 cut(s)	507, 657, 1527
BbvI	GCAGC	7 cut(s)	262, 415, 919, 1664, 1672, 1890, 2049
BccI	CCATC	4 cut(s)	326, 461, 1540, 2085
BceAI	ACGGC	5 cut(s)	28, 264, 1539, 1937, 2027
BcgI	CGANNNNNNTGC	2 cut(s)	116, 150
BciT130I	CCWGG	5 cut(s)	88, 1411, 1425, 1961, 1977
BclI	TGATCA	2 cut(s)	900, 1195
BcoDI	GTCTC	3 cut(s)	122, 239, 504
BfaI	CTAG	3 cut(s)	27, 450, 740
BfmI	CTRYAG	2 cut(s)	821, 952
BfoI	RGCGCY	1 cut(s)	260
BfuAI	ACCTGC	1 cut(s)	1183
BlpI	GCTNAGC	1 cut(s)	390
Bme18I	GGWCC	4 cut(s)	13, 55, 1500, 2010
BmeT110I	CYCGRG	6 cut(s)	38, 180, 188, 200, 518, 769
BmsI	GCATC	6 cut(s)	1187, 1415, 1476, 1637, 1668, 1812
BoxI	GACNNNNGTC	1 cut(s)	880
BpiI	GAAGAC	1 cut(s)	104
BpmI	CTGGAG	1 cut(s)	1158
Bpu1102I	GCTNAGC	1 cut(s)	390
BpuEI	CTTGAG	1 cut(s)	1007
BsaBI	GATNNNNATC	1 cut(s)	294
BsaHI	GRCGYC	1 cut(s)	257
BsaI	GGTCTC	1 cut(s)	122
Bse118I	RCCGGY	3 cut(s)	101, 259, 271
Bse1I	ACTGG	5 cut(s)	138, 877, 908, 1322, 1495
Bse3DI	GCAATG	3 cut(s)	615, 1017, 1198
Bse8I	GATNNNNATC	1 cut(s)	294
BseBI	CCWGG	5 cut(s)	88, 1411, 1425, 1961, 1977
BseGI	GGATG	4 cut(s)	445, 466, 1406, 1899
BseJI	GATNNNNATC	1 cut(s)	294
BseMI	GCAATG	3 cut(s)	615, 1017, 1198
BseMII	CTCAG	2 cut(s)	381, 520
BseNI	ACTGG	5 cut(s)	138, 877, 908, 1322, 1495
BseRI	GAGGAG	3 cut(s)	331, 424, 436
BseSI	GKGCMC	3 cut(s)	725, 1527, 1872
BseXI	GCAGC	7 cut(s)	262, 415, 919, 1664, 1672, 1890, 2049
BsgI	GTGCAG	1 cut(s)	1022
Bsh1236I	CGCG	1 cut(s)	34
BshNI	GGYRCC	1 cut(s)	256
BsiHKAI	GWGCWC	3 cut(s)	507, 657, 1527
BsiHKCI	CYCGRG	6 cut(s)	38, 180, 188, 200, 518, 769
BslFI	GGGAC	1 cut(s)	41
BsmAI	GTCTC	3 cut(s)	122, 239, 504
BsmBI	CGTCTC	1 cut(s)	239
BsmFI	GGGAC	1 cut(s)	41
BsmI	GAATGC	2 cut(s)	352, 1940
Bso31I	GGTCTC	1 cut(s)	122
BsoBI	CYCGRG	6 cut(s)	38, 180, 188, 200, 518, 769
Bsp120I	GGGCCC	2 cut(s)	721, 1868
Bsp1286I	GDGCHC	9 cut(s)	68, 189, 195, 396, 507, 657, 725, 1527, 1872
Bsp143I	GATC	5 cut(s)	196, 295, 698, 900, 1195
Bsp1720I	GCTNAGC	1 cut(s)	390
Bsp19I	CCATGG	1 cut(s)	1268
BspCNI	CTCAG	2 cut(s)	382, 519
BspFNI	CGCG	1 cut(s)	34
BspHI	TCATGA	1 cut(s)	810
BspMI	ACCTGC	1 cut(s)	1183
BspPI	GGATC	2 cut(s)	303, 706
BspT107I	GGYRCC	1 cut(s)	256
BspTNI	GGTCTC	1 cut(s)	122
BsrDI	GCAATG	3 cut(s)	615, 1017, 1198
BsrFI	RCCGGY	3 cut(s)	101, 259, 271
BsrI	ACTGG	5 cut(s)	138, 877, 908, 1322, 1495
BssAI	RCCGGY	3 cut(s)	101, 259, 271
BssMI	GATC	5 cut(s)	196, 295, 698, 900, 1195
BssNI	GRCGYC	1 cut(s)	257
BssT1I	CCWWGG	1 cut(s)	1268
Bst2UI	CCWGG	5 cut(s)	88, 1411, 1425, 1961, 1977
Bst4CI	ACNGT	4 cut(s)	652, 956, 1232, 1972
Bst6I	CTCTTC	1 cut(s)	308
BstACI	GRCGYC	1 cut(s)	257
BstC8I	GCNNGC	7 cut(s)	208, 273, 352, 372, 1579, 1683, 2040
BstDEI	CTNAG	3 cut(s)	390, 506, 1542
BstDSI	CCRYGG	3 cut(s)	44, 355, 1268
BstF5I	GGATG	4 cut(s)	445, 466, 1406, 1899
BstFNI	CGCG	1 cut(s)	34
BstH2I	RGCGCY	1 cut(s)	260
BstHHI	GCGC	1 cut(s)	259
BstKTI	GATC	5 cut(s)	199, 298, 701, 903, 1198
BstMAI	GTCTC	3 cut(s)	122, 239, 504
BstMBI	GATC	5 cut(s)	196, 295, 698, 900, 1195
BstMWI	GCNNNNNNNGC	7 cut(s)	40, 263, 272, 386, 400, 854, 1682
BstNI	CCWGG	5 cut(s)	88, 1411, 1425, 1961, 1977
BstNSI	RCATGY	2 cut(s)	1214, 1581
BstPAI	GACNNNNGTC	1 cut(s)	880
BstSFI	CTRYAG	2 cut(s)	821, 952
BstSLI	GKGCMC	3 cut(s)	725, 1527, 1872
BstUI	CGCG	1 cut(s)	34
BstV1I	GCAGC	7 cut(s)	262, 415, 919, 1664, 1672, 1890, 2049
BstV2I	GAAGAC	1 cut(s)	104
BstXI	CCANNNNNNTGG	1 cut(s)	1471
BtgI	CCRYGG	3 cut(s)	44, 355, 1268
BtgZI	GCGATG	1 cut(s)	1691
BtsCI	GGATG	4 cut(s)	445, 466, 1406, 1899
BtsI	GCAGTG	2 cut(s)	71, 630
BtsIMutI	CAGTG	8 cut(s)	71, 145, 630, 657, 915, 1228, 1315, 1368
BveI	ACCTGC	1 cut(s)	1183
Cac8I	GCNNGC	7 cut(s)	208, 273, 352, 372, 1579, 1683, 2040
CaiI	CAGNNNCTG	1 cut(s)	1976
CciI	TCATGA	1 cut(s)	810
CfoI	GCGC	1 cut(s)	259
Cfr10I	RCCGGY	3 cut(s)	101, 259, 271
Cfr9I	CCCGGG	4 cut(s)	38, 180, 518, 769
Csp6I	GTAC	6 cut(s)	618, 978, 1172, 1302, 1488, 1973
CviQI	GTAC	6 cut(s)	618, 978, 1172, 1302, 1488, 1973
DdeI	CTNAG	3 cut(s)	390, 506, 1542
DinI	GGCGCC	1 cut(s)	258
DpnI	GATC	5 cut(s)	198, 297, 700, 902, 1197
DpnII	GATC	5 cut(s)	196, 295, 698, 900, 1195
DraIII	CACNNNGTG	1 cut(s)	1933
EaeI	YGGCCR	3 cut(s)	148, 1950, 2077
Eam1104I	CTCTTC	1 cut(s)	308
EarI	CTCTTC	1 cut(s)	308
Ecl136II	GAGCTC	1 cut(s)	505
Eco130I	CCWWGG	1 cut(s)	1268
Eco147I	AGGCCT	1 cut(s)	1414
Eco24I	GRGCYC	7 cut(s)	68, 189, 195, 396, 507, 725, 1872
Eco31I	GGTCTC	1 cut(s)	122
Eco32I	GATATC	1 cut(s)	1047
Eco47I	GGWCC	4 cut(s)	13, 55, 1500, 2010
Eco53kI	GAGCTC	1 cut(s)	505
Eco57I	CTGAAG	2 cut(s)	1152, 2053
Eco88I	CYCGRG	6 cut(s)	38, 180, 188, 200, 518, 769
EcoICRI	GAGCTC	1 cut(s)	505
EcoO109I	RGGNCCY	3 cut(s)	721, 722, 1869
EcoRII	CCWGG	5 cut(s)	86, 1409, 1423, 1959, 1975
EcoRV	GATATC	1 cut(s)	1047
EcoT14I	CCWWGG	1 cut(s)	1268
EcoT22I	ATGCAT	1 cut(s)	1255
EcoT38I	GRGCYC	7 cut(s)	68, 189, 195, 396, 507, 725, 1872
EgeI	GGCGCC	1 cut(s)	258
EheI	GGCGCC	1 cut(s)	258
ErhI	CCWWGG	1 cut(s)	1268
Esp3I	CGTCTC	1 cut(s)	239
FalI	AAGNNNNNCTT	4 cut(s)	89, 121, 846, 878
FaqI	GGGAC	1 cut(s)	41
FauI	CCCGC	6 cut(s)	174, 179, 199, 343, 754, 1468
FauNDI	CATATG	1 cut(s)	492
FbaI	TGATCA	2 cut(s)	900, 1195
FokI	GGATG	4 cut(s)	452, 473, 1393, 1906
FriOI	GRGCYC	7 cut(s)	68, 189, 195, 396, 507, 725, 1872
FspBI	CTAG	3 cut(s)	27, 450, 740
GlaI	GCGC	1 cut(s)	258
GsuI	CTGGAG	1 cut(s)	1158
HaeII	RGCGCY	1 cut(s)	260
HhaI	GCGC	1 cut(s)	259
Hin1I	GRCGYC	1 cut(s)	257
Hin6I	GCGC	1 cut(s)	257
HinP1I	GCGC	1 cut(s)	257
HinfI	GANTC	5 cut(s)	143, 326, 546, 783, 1367
HphI	GGTGA	6 cut(s)	60, 226, 322, 912, 1945, 2107
Hpy166II	GTNNAC	3 cut(s)	736, 1503, 1525
Hpy188I	TCNGA	9 cut(s)	13, 282, 331, 509, 1195, 1734, 2014, 2072, 2090
Hpy188III	TCNNGA	9 cut(s)	200, 666, 702, 811, 986, 1218, 1451, 1585, 1988
Hpy8I	GTNNAC	3 cut(s)	736, 1503, 1525
Hpy99I	CGWCG	1 cut(s)	694
HpyAV	CCTTC	7 cut(s)	223, 316, 735, 808, 1448, 1882, 2077
HpyCH4III	ACNGT	4 cut(s)	652, 956, 1232, 1972
HpyCH4IV	ACGT	5 cut(s)	639, 689, 1708, 1993, 2017
HpyF10VI	GCNNNNNNNGC	7 cut(s)	40, 263, 272, 386, 400, 854, 1682
HpyF3I	CTNAG	3 cut(s)	390, 506, 1542
HpySE526I	ACGT	5 cut(s)	639, 689, 1708, 1993, 2017
Hsp92I	GRCGYC	1 cut(s)	257
HspAI	GCGC	1 cut(s)	257
KasI	GGCGCC	1 cut(s)	256
KroI	GCCGGC	1 cut(s)	271
KroNI	GCCGGC	1 cut(s)	273
Ksp22I	TGATCA	2 cut(s)	900, 1195
Kzo9I	GATC	5 cut(s)	196, 295, 698, 900, 1195
LmnI	GCTCC	5 cut(s)	184, 256, 283, 817, 2035
Lsp1109I	GCAGC	7 cut(s)	262, 415, 919, 1664, 1672, 1890, 2049
LweI	GCATC	6 cut(s)	1187, 1415, 1476, 1637, 1668, 1812
MaeI	CTAG	3 cut(s)	27, 450, 740
MaeII	ACGT	5 cut(s)	639, 689, 1708, 1993, 2017
MaeIII	GTNAC	5 cut(s)	670, 918, 1290, 1537, 1923
MalI	GATC	5 cut(s)	198, 297, 700, 902, 1197
MboI	GATC	5 cut(s)	196, 295, 698, 900, 1195
MboII	GAAGA	7 cut(s)	109, 325, 355, 440, 1054, 1254, 1383
MfeI	CAATTG	1 cut(s)	927
MhlI	GDGCHC	9 cut(s)	68, 189, 195, 396, 507, 657, 725, 1527, 1872
Mly113I	GGCGCC	1 cut(s)	257
MlyI	GAGTC	2 cut(s)	335, 777
MmeI	TCCRAC	5 cut(s)	919, 1442, 1594, 1842, 2086
Mph1103I	ATGCAT	1 cut(s)	1255
MroNI	GCCGGC	1 cut(s)	271
MseI	TTAA	5 cut(s)	584, 801, 1256, 1511, 2113
MslI	CAYNNNNRTG	2 cut(s)	1544, 1660
MunI	CAATTG	1 cut(s)	927
Mva1269I	GAATGC	2 cut(s)	352, 1940
MvaI	CCWGG	5 cut(s)	88, 1411, 1425, 1961, 1977
MvnI	CGCG	1 cut(s)	34
MwoI	GCNNNNNNNGC	7 cut(s)	40, 263, 272, 386, 400, 854, 1682
NaeI	GCCGGC	1 cut(s)	273
NarI	GGCGCC	1 cut(s)	257
NcoI	CCATGG	1 cut(s)	1268
NdeI	CATATG	1 cut(s)	492
NdeII	GATC	5 cut(s)	196, 295, 698, 900, 1195
NgoMIV	GCCGGC	1 cut(s)	271
NmeAIII	GCCGAG	1 cut(s)	432
NmuCI	GTSAC	3 cut(s)	670, 918, 1537
NsiI	ATGCAT	1 cut(s)	1255
NspI	RCATGY	2 cut(s)	1214, 1581
OliI	CACNNNNGTG	1 cut(s)	1660
PaeI	GCATGC	1 cut(s)	1581
PaeR7I	CTCGAG	1 cut(s)	200
PagI	TCATGA	1 cut(s)	810
PceI	AGGCCT	1 cut(s)	1414
PcsI	WCGNNNNNNNCGW	1 cut(s)	1990
PctI	GAATGC	2 cut(s)	352, 1940
PdiI	GCCGGC	1 cut(s)	273
PfeI	GAWTC	3 cut(s)	143, 546, 1367
PflMI	CCANNNNNTGG	3 cut(s)	974, 1424, 1645
PfoI	TCCNGGA	2 cut(s)	57, 1959
PleI	GAGTC	2 cut(s)	334, 777
PluTI	GGCGCC	1 cut(s)	260
PpsI	GAGTC	2 cut(s)	334, 777
PshAI	GACNNNNGTC	1 cut(s)	880
Psp124BI	GAGCTC	1 cut(s)	507
Psp6I	CCWGG	5 cut(s)	86, 1409, 1423, 1959, 1975
PspGI	CCWGG	5 cut(s)	86, 1409, 1423, 1959, 1975
PspOMI	GGGCCC	2 cut(s)	721, 1868
PstNI	CAGNNNCTG	1 cut(s)	1976
RsaI	GTAC	6 cut(s)	619, 979, 1173, 1303, 1489, 1974
RsaNI	GTAC	6 cut(s)	618, 978, 1172, 1302, 1488, 1973
RseI	CAYNNNNRTG	2 cut(s)	1544, 1660
SacI	GAGCTC	1 cut(s)	507
SaqAI	TTAA	5 cut(s)	584, 801, 1256, 1511, 2113
Sau3AI	GATC	5 cut(s)	196, 295, 698, 900, 1195
SchI	GAGTC	2 cut(s)	335, 777
SduI	GDGCHC	9 cut(s)	68, 189, 195, 396, 507, 657, 725, 1527, 1872
SfaNI	GCATC	6 cut(s)	1187, 1415, 1476, 1637, 1668, 1812
SfcI	CTRYAG	2 cut(s)	821, 952
SfoI	GGCGCC	1 cut(s)	258
Sfr274I	CTCGAG	1 cut(s)	200
SgrAI	CRCCGGYG	1 cut(s)	259
SinI	GGWCC	4 cut(s)	13, 55, 1500, 2010
SlaI	CTCGAG	1 cut(s)	200
SmaI	CCCGGG	4 cut(s)	40, 182, 520, 771
SmiMI	CAYNNNNRTG	2 cut(s)	1544, 1660
SmlI	CTYRAG	2 cut(s)	200, 986
SmoI	CTYRAG	2 cut(s)	200, 986
SphI	GCATGC	1 cut(s)	1581
SrfI	GCCCGGGC	1 cut(s)	520
SseBI	AGGCCT	1 cut(s)	1414
SspDI	GGCGCC	1 cut(s)	256
SspI	AATATT	1 cut(s)	1738
SspMI	CTAG	3 cut(s)	27, 450, 740
SstI	GAGCTC	1 cut(s)	507
StuI	AGGCCT	1 cut(s)	1414
StyI	CCWWGG	1 cut(s)	1268
TaaI	ACNGT	4 cut(s)	652, 956, 1232, 1972
TaiI	ACGT	5 cut(s)	642, 692, 1711, 1996, 2020
TaqI	TCGA	9 cut(s)	5, 201, 341, 575, 647, 1181, 1217, 1234, 1438
TauI	GCSGC	6 cut(s)	34, 79, 236, 377, 380, 419
TfiI	GAWTC	3 cut(s)	143, 546, 1367
Tru1I	TTAA	5 cut(s)	584, 801, 1256, 1511, 2113
Tru9I	TTAA	5 cut(s)	584, 801, 1256, 1511, 2113
TscAI	CASTG	8 cut(s)	78, 145, 637, 657, 915, 1235, 1322, 1368
TseFI	GTSAC	3 cut(s)	670, 918, 1537
TseI	GCWGC	7 cut(s)	275, 403, 932, 1652, 1685, 1878, 2062
Tsp45I	GTSAC	3 cut(s)	670, 918, 1537
TspDTI	ATGAA	6 cut(s)	509, 717, 827, 1238, 1657, 1910
TspGWI	ACGGA	3 cut(s)	372, 1054, 1278
TspMI	CCCGGG	4 cut(s)	38, 180, 518, 769
TspRI	CASTG	8 cut(s)	78, 145, 637, 657, 915, 1235, 1322, 1368
Van91I	CCANNNNNTGG	3 cut(s)	974, 1424, 1645
VneI	GTGCAC	1 cut(s)	1523
VpaK11BI	GGWCC	4 cut(s)	13, 55, 1500, 2010
XapI	RAATTY	1 cut(s)	1258
XceI	RCATGY	2 cut(s)	1214, 1581
XcmI	CCANNNNNNNNNTGG	1 cut(s)	362
XhoI	CTCGAG	1 cut(s)	200
XmaI	CCCGGG	4 cut(s)	38, 180, 518, 769
XspI	CTAG	3 cut(s)	27, 450, 740
Zsp2I	ATGCAT	1 cut(s)	1255

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.