RchiOBHm_Chr5g0043401

Nucleobase-ascorbate transporter

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0007879
Physical Location & Seq
Forward (+)
38345377 .. 38352446
7070 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ32171

Sequence Viewer

Length: 2118 bp
ATGTCGAACTCGGACCCTAAACCCACTAGGCCGCGACCCGGGCCGTGGCCCCCGGTTCCGGAGGGCTCACCACTGCCGCCCTCGTCCTGGGCCAAGAAGACCGGCTTCCGCCCCAAGTTCTCCGGCGAGACCAATGCCAGTGATTCCGGCCAGATAGCCTTGCCCCCGCCCCGGCCGACCCGGGAGCCCGAGCCCGATCTCGAGGCGGGCCGGGTGAGGAGCCAACCGAAGGCGGCGAATGGGGAGACGGCTCCGGCGCCGGTGGCGAAGCCGGCTGCTCCGAGTGGGGATAAGGATCAGACGGTGGTGGTGAAGAGGAGGAAGGAGTCCGATGGTGGGTCGAAGAATGCGGGCCACGGAACCAATGGGCAAGCGGCGGTGGCGGTTCCGGCTGAGCCCAATTCGCAGCCGAGGAGGGCGGCGAGGAGTGAAGAAGTGGTGGATGTTTTGCCTAGTAGTGTGGATGATGATGGGTATGTGGGCAGGAGTTCGCATATGAAGTATGAGCTCAGAGACACGCCCGGGCTTGTTCCCATTGGTCTATATGGATTCCAGCATTATCTCTCCATATTGGGTTCGATAATTTTAATTCCACTCGTCATAGTTCCAGCAATGGGTGGTACTTATGAGGATACTGCAAACGTGGTATCGACAGTGCTCTTTGTTTCGGGAGTGACCACTCTCTTGCAAATGTCGTTTGGATCAAGATTGCCCTTGATACAGGGCCCTTCATTTGTTTACCTAGCACCCGCTTTGGCAATAATCAATTCCCCGGAATTTCAAGGACTCAATGGAAATAATTTTAAGCATATCATGAAGGAGCTACAGGGGGCAGTAATAATAGGTTCAGCTTTTCAAGCAATACTTGGATATACTGGACTAATGTCATTGTTTTTGAGGTTGATCAATCCAGTGGTTGTGTCACCAACAATTGCTGCTGTTGGACTTTCTTTCTACAGTTATGGTTTCCCATTAGTTGGTACTTGTCTTGAGATTGGTGCTGTGCAGATATTATTGGTCATTGCTTTTTCTCTTTACTTACGGAAGATATCTGTTTTTGGTCATCGTGTATTTCTAATATATGCAGTTCCATTGGGTCTGGCAATCACATGGGCAACTGCTTTCCTCCTAACTGAAGCTGGAGTATATAACTACAAAGGCTGTGATACAAATGTACCTGCATCGAACATAATTTCTGATCATTGCAGAAAGCATGTGTCGAGAATGAAGCACTGTCGAGTTGATACTTCTCATGCATTAAATTCTTCCCCATGGTTTAGGTTTCCTTATCCGTTACAATGGGGTACTCCTGTTTTCCACTGGAAAATGGCTATTGTTATGTGTGTGGTTTCAATTATCTCATCAGTGGATTCGGTTGGCTCATATCATGCTTCTTCACTATTGGTGGCATCCAGGCCTCCAACTCCTGGTGTTGTTAGTCGAGGGATCGGTCTTGAAGGTCTTTCCAGCATCTTGGCGGGTTTATGGGGTACTGGAACAGGGTCCACAAGTTTAACTGAAAATGTGCACACAATAGCTGTCACTAAGATGGGAAGTCGTAGAGCAGTTGAATTGGGTGCGTGCCTTTTGATTGTCTTATCCCTTGTTGGTAAAGTTGGAGGGTTTCTTGCATCAATTCCCCAAGTCATGGTTGCAGCACTTCTGTGCTTCATGTGGGCGATGCTTGCTGCATTGGGTCTGTCAAATCTACGTTATAGCGAGGCTGGAAGCTCTCGGAATATTATCATTGTCGGGCTATCTTTGTTTTTCTCGCTGTCAATACCAGCATACTTTCAGCAATATGGCATCTCTCCAAACTCCAACTCATCTGTTCCAAGTTATTTTCAGCCATATATTGTGGCTTCTCATGGGCCCTTCCGCAGCAAATATGGAGGGATGAACTATGTCCTCAACACATTATTTTCATTACACATGGTGATTGCATTCCTTGTGGCTGTTATCCTGGACAACACAGTACCTGGAAGTCGTCAAGAACGTGGTGTATATGTGTGGTCCGAACGTGAGGTTGCAAAGAGGGAGCCTGCCGTTGCCAAAGACTATGAGCTGCCCTTCAGAATTGGCCGGGTTTTCAGATGGGTGAAATGGGTTGGACTTTAA

Protein Analysis

705

Amino Acids

75.84

Weight (kDa)

9.46

Isoelectric Point (pI)

44.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Xan_ur_permease PF00860 181 - 598 7.7e-66 Permease family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1186
AccB1I GGYRCC 1 cut(s) 256
AccB7I CCANNNNNTGG 3 cut(s) 977, 1427, 1648
AccII CGCG 1 cut(s) 34
AccIII TCCGGA 1 cut(s) 58
AclWI GGATC 3 cut(s) 303, 709, 1454
AcoI YGGCCR 3 cut(s) 148, 173, 2080
AcsI RAATTY 2 cut(s) 776, 1261
AcuI CTGAAG 2 cut(s) 1155, 2056
AcyI GRCGYC 1 cut(s) 257
AdeI CACNNNGTG 1 cut(s) 1936
AfaI GTAC 6 cut(s) 622, 982, 1176, 1306, 1492, 1977
AgsI TTSAA 5 cut(s) 782, 857, 1353, 1457, 1571
AjnI CCWGG 5 cut(s) 86, 1412, 1426, 1962, 1978
AleI CACNNNNGTG 1 cut(s) 1663
AluBI AGCT 7 cut(s) 508, 823, 851, 1139, 1538, 1731, 2065
AluI AGCT 7 cut(s) 508, 823, 851, 1139, 1538, 1731, 2065
Alw21I GWGCWC 3 cut(s) 510, 660, 1530
Alw26I GTCTC 3 cut(s) 122, 239, 507
Alw44I GTGCAC 1 cut(s) 1526
AlwI GGATC 3 cut(s) 303, 709, 1454
AlwNI CAGNNNCTG 1 cut(s) 1979
Ama87I CYCGRG 5 cut(s) 38, 180, 188, 200, 521
Aor13HI TCCGGA 1 cut(s) 58
ApaI GGGCCC 2 cut(s) 728, 1875
ApaLI GTGCAC 1 cut(s) 1526
ApeKI GCWGC 7 cut(s) 275, 406, 935, 1655, 1688, 1881, 2065
ApoI RAATTY 2 cut(s) 776, 1261
AspLEI GCGC 1 cut(s) 259
AsuHPI GGTGA 6 cut(s) 60, 226, 322, 915, 1948, 2110
AvaI CYCGRG 5 cut(s) 38, 180, 188, 200, 521
AvaII GGWCC 3 cut(s) 13, 1503, 2013
BaeGI GKGCMC 3 cut(s) 728, 1530, 1875
BaeI ACNNNNGTAYC 6 cut(s) 1158, 1158, 1191, 1191, 1296, 1329
BanI GGYRCC 1 cut(s) 256
BanII GRGCYC 7 cut(s) 68, 189, 195, 399, 510, 728, 1875
BbsI GAAGAC 1 cut(s) 104
Bbv12I GWGCWC 3 cut(s) 510, 660, 1530
BbvI GCAGC 7 cut(s) 262, 418, 922, 1667, 1675, 1893, 2052
BccI CCATC 4 cut(s) 326, 464, 1543, 2088
BceAI ACGGC 3 cut(s) 28, 264, 2030
BcgI CGANNNNNNTGC 2 cut(s) 116, 150
BciT130I CCWGG 5 cut(s) 88, 1414, 1428, 1964, 1980
BciVI GTATCC 1 cut(s) 625
BclI TGATCA 2 cut(s) 903, 1198
BcoDI GTCTC 3 cut(s) 122, 239, 507
BfaI CTAG 3 cut(s) 27, 453, 743
BfmI CTRYAG 2 cut(s) 824, 955
BfoI RGCGCY 1 cut(s) 260
BfuAI ACCTGC 1 cut(s) 1186
BfuI GTATCC 1 cut(s) 625
BlpI GCTNAGC 1 cut(s) 393
Bme18I GGWCC 3 cut(s) 13, 1503, 2013
BmeT110I CYCGRG 5 cut(s) 38, 180, 188, 200, 521
BmsI GCATC 6 cut(s) 1190, 1418, 1479, 1640, 1671, 1815
BoxI GACNNNNGTC 1 cut(s) 883
BpiI GAAGAC 1 cut(s) 104
BpmI CTGGAG 1 cut(s) 1161
Bpu1102I GCTNAGC 1 cut(s) 393
BpuEI CTTGAG 1 cut(s) 1010
BsaBI GATNNNNATC 1 cut(s) 294
BsaHI GRCGYC 1 cut(s) 257
BsaI GGTCTC 1 cut(s) 122
BsaWI WCCGGW 1 cut(s) 58
Bse118I RCCGGY 3 cut(s) 101, 259, 271
Bse1I ACTGG 5 cut(s) 138, 880, 911, 1325, 1498
Bse3DI GCAATG 3 cut(s) 618, 1020, 1201
Bse8I GATNNNNATC 1 cut(s) 294
BseAI TCCGGA 1 cut(s) 58
BseBI CCWGG 5 cut(s) 88, 1414, 1428, 1964, 1980
BseGI GGATG 4 cut(s) 448, 469, 1409, 1902
BseJI GATNNNNATC 1 cut(s) 294
BseMI GCAATG 3 cut(s) 618, 1020, 1201
BseMII CTCAG 2 cut(s) 384, 523
BseNI ACTGG 5 cut(s) 138, 880, 911, 1325, 1498
BseRI GAGGAG 4 cut(s) 232, 331, 427, 439
BseSI GKGCMC 3 cut(s) 728, 1530, 1875
BseX3I CGGCCG 1 cut(s) 173
BseXI GCAGC 7 cut(s) 262, 418, 922, 1667, 1675, 1893, 2052
BsgI GTGCAG 1 cut(s) 1025
Bsh1236I CGCG 1 cut(s) 34
Bsh1285I CGRYCG 1 cut(s) 176
BshNI GGYRCC 1 cut(s) 256
BsiEI CGRYCG 1 cut(s) 176
BsiHKAI GWGCWC 3 cut(s) 510, 660, 1530
BsiHKCI CYCGRG 5 cut(s) 38, 180, 188, 200, 521
BsmAI GTCTC 3 cut(s) 122, 239, 507
BsmBI CGTCTC 1 cut(s) 239
BsmI GAATGC 2 cut(s) 352, 1943
Bso31I GGTCTC 1 cut(s) 122
BsoBI CYCGRG 5 cut(s) 38, 180, 188, 200, 521
Bsp120I GGGCCC 2 cut(s) 724, 1871
Bsp1286I GDGCHC 9 cut(s) 68, 189, 195, 399, 510, 660, 728, 1530, 1875
Bsp13I TCCGGA 1 cut(s) 58
Bsp143I GATC 6 cut(s) 196, 295, 701, 903, 1198, 1446
Bsp1720I GCTNAGC 1 cut(s) 393
Bsp19I CCATGG 1 cut(s) 1271
BspCNI CTCAG 2 cut(s) 385, 522
BspEI TCCGGA 1 cut(s) 58
BspFNI CGCG 1 cut(s) 34
BspHI TCATGA 1 cut(s) 813
BspMI ACCTGC 1 cut(s) 1186
BspPI GGATC 3 cut(s) 303, 709, 1454
BspT107I GGYRCC 1 cut(s) 256
BspTNI GGTCTC 1 cut(s) 122
BsrDI GCAATG 3 cut(s) 618, 1020, 1201
BsrFI RCCGGY 3 cut(s) 101, 259, 271
BsrI ACTGG 5 cut(s) 138, 880, 911, 1325, 1498
BssAI RCCGGY 3 cut(s) 101, 259, 271
BssMI GATC 6 cut(s) 196, 295, 701, 903, 1198, 1446
BssNI GRCGYC 1 cut(s) 257
BssT1I CCWWGG 1 cut(s) 1271
Bst2UI CCWGG 5 cut(s) 88, 1414, 1428, 1964, 1980
Bst4CI ACNGT 5 cut(s) 304, 655, 959, 1235, 1975
Bst6I CTCTTC 1 cut(s) 308
BstACI GRCGYC 1 cut(s) 257
BstC8I GCNNGC 7 cut(s) 208, 273, 352, 372, 1582, 1686, 2043
BstDEI CTNAG 3 cut(s) 393, 509, 1545
BstDSI CCRYGG 3 cut(s) 44, 355, 1271
BstF5I GGATG 4 cut(s) 448, 469, 1409, 1902
BstFNI CGCG 1 cut(s) 34
BstH2I RGCGCY 1 cut(s) 260
BstHHI GCGC 1 cut(s) 259
BstKTI GATC 6 cut(s) 199, 298, 704, 906, 1201, 1449
BstMAI GTCTC 3 cut(s) 122, 239, 507
BstMBI GATC 6 cut(s) 196, 295, 701, 903, 1198, 1446
BstMCI CGRYCG 1 cut(s) 176
BstMWI GCNNNNNNNGC 8 cut(s) 40, 263, 272, 380, 389, 403, 857, 1685
BstNI CCWGG 5 cut(s) 88, 1414, 1428, 1964, 1980
BstNSI RCATGY 1 cut(s) 1217
BstPAI GACNNNNGTC 1 cut(s) 883
BstSFI CTRYAG 2 cut(s) 824, 955
BstSLI GKGCMC 3 cut(s) 728, 1530, 1875
BstUI CGCG 1 cut(s) 34
BstV1I GCAGC 7 cut(s) 262, 418, 922, 1667, 1675, 1893, 2052
BstV2I GAAGAC 1 cut(s) 104
BstXI CCANNNNNNTGG 1 cut(s) 1474
BstZI CGGCCG 1 cut(s) 173
BsuI GTATCC 1 cut(s) 625
BtgI CCRYGG 3 cut(s) 44, 355, 1271
BtgZI GCGATG 1 cut(s) 1694
BtsCI GGATG 4 cut(s) 448, 469, 1409, 1902
BtsI GCAGTG 1 cut(s) 71
BtsIMutI CAGTG 7 cut(s) 71, 145, 660, 918, 1231, 1318, 1371
BveI ACCTGC 1 cut(s) 1186
Cac8I GCNNGC 7 cut(s) 208, 273, 352, 372, 1582, 1686, 2043
CaiI CAGNNNCTG 1 cut(s) 1979
CciI TCATGA 1 cut(s) 813
CfoI GCGC 1 cut(s) 259
Cfr10I RCCGGY 3 cut(s) 101, 259, 271
Cfr9I CCCGGG 3 cut(s) 38, 180, 521
Csp6I GTAC 6 cut(s) 621, 981, 1175, 1305, 1491, 1976
CviQI GTAC 6 cut(s) 621, 981, 1175, 1305, 1491, 1976
DdeI CTNAG 3 cut(s) 393, 509, 1545
DinI GGCGCC 1 cut(s) 258
DpnI GATC 6 cut(s) 198, 297, 703, 905, 1200, 1448
DpnII GATC 6 cut(s) 196, 295, 701, 903, 1198, 1446
DraIII CACNNNGTG 1 cut(s) 1936
EaeI YGGCCR 3 cut(s) 148, 173, 2080
EagI CGGCCG 1 cut(s) 173
Eam1104I CTCTTC 1 cut(s) 308
EarI CTCTTC 1 cut(s) 308
EciI GGCGGA 1 cut(s) 98
Ecl136II GAGCTC 1 cut(s) 508
EclXI CGGCCG 1 cut(s) 173
Eco130I CCWWGG 1 cut(s) 1271
Eco147I AGGCCT 1 cut(s) 1417
Eco24I GRGCYC 7 cut(s) 68, 189, 195, 399, 510, 728, 1875
Eco31I GGTCTC 1 cut(s) 122
Eco32I GATATC 1 cut(s) 1050
Eco47I GGWCC 3 cut(s) 13, 1503, 2013
Eco52I CGGCCG 1 cut(s) 173
Eco53kI GAGCTC 1 cut(s) 508
Eco57I CTGAAG 2 cut(s) 1155, 2056
Eco88I CYCGRG 5 cut(s) 38, 180, 188, 200, 521
EcoICRI GAGCTC 1 cut(s) 508
EcoO109I RGGNCCY 3 cut(s) 724, 725, 1872
EcoRII CCWGG 5 cut(s) 86, 1412, 1426, 1962, 1978
EcoRV GATATC 1 cut(s) 1050
EcoT14I CCWWGG 1 cut(s) 1271
EcoT22I ATGCAT 1 cut(s) 1258
EcoT38I GRGCYC 7 cut(s) 68, 189, 195, 399, 510, 728, 1875
EgeI GGCGCC 1 cut(s) 258
EheI GGCGCC 1 cut(s) 258
ErhI CCWWGG 1 cut(s) 1271
Esp3I CGTCTC 1 cut(s) 239
FalI AAGNNNNNCTT 4 cut(s) 89, 121, 849, 881
FauI CCCGC 5 cut(s) 174, 199, 343, 757, 1471
FauNDI CATATG 1 cut(s) 495
FbaI TGATCA 2 cut(s) 903, 1198
FokI GGATG 4 cut(s) 455, 476, 1396, 1909
FriOI GRGCYC 7 cut(s) 68, 189, 195, 399, 510, 728, 1875
FspBI CTAG 3 cut(s) 27, 453, 743
GlaI GCGC 1 cut(s) 258
GsuI CTGGAG 1 cut(s) 1161
HaeII RGCGCY 1 cut(s) 260
HhaI GCGC 1 cut(s) 259
Hin1I GRCGYC 1 cut(s) 257
Hin6I GCGC 1 cut(s) 257
HinP1I GCGC 1 cut(s) 257
HinfI GANTC 5 cut(s) 143, 326, 549, 786, 1370
HphI GGTGA 6 cut(s) 60, 226, 322, 915, 1948, 2110
Hpy166II GTNNAC 3 cut(s) 739, 1506, 1528
Hpy188III TCNNGA 9 cut(s) 59, 200, 669, 705, 814, 989, 1221, 1454, 1991
Hpy8I GTNNAC 3 cut(s) 739, 1506, 1528
HpyAV CCTTC 7 cut(s) 223, 316, 738, 811, 1451, 1885, 2080
HpyCH4III ACNGT 5 cut(s) 304, 655, 959, 1235, 1975
HpyCH4IV ACGT 4 cut(s) 642, 1711, 1996, 2020
HpyF10VI GCNNNNNNNGC 8 cut(s) 40, 263, 272, 380, 389, 403, 857, 1685
HpyF3I CTNAG 3 cut(s) 393, 509, 1545
HpySE526I ACGT 4 cut(s) 642, 1711, 1996, 2020
Hsp92I GRCGYC 1 cut(s) 257
HspAI GCGC 1 cut(s) 257
KasI GGCGCC 1 cut(s) 256
Kpn2I TCCGGA 1 cut(s) 58
KroI GCCGGC 1 cut(s) 271
KroNI GCCGGC 1 cut(s) 273
Ksp22I TGATCA 2 cut(s) 903, 1198
Kzo9I GATC 6 cut(s) 196, 295, 701, 903, 1198, 1446
LmnI GCTCC 6 cut(s) 184, 219, 256, 283, 820, 2038
Lsp1109I GCAGC 7 cut(s) 262, 418, 922, 1667, 1675, 1893, 2052
LweI GCATC 6 cut(s) 1190, 1418, 1479, 1640, 1671, 1815
MaeI CTAG 3 cut(s) 27, 453, 743
MaeII ACGT 4 cut(s) 642, 1711, 1996, 2020
MaeIII GTNAC 4 cut(s) 673, 921, 1293, 1540
MalI GATC 6 cut(s) 198, 297, 703, 905, 1200, 1448
MboI GATC 6 cut(s) 196, 295, 701, 903, 1198, 1446
MboII GAAGA 7 cut(s) 109, 325, 355, 443, 1057, 1257, 1386
MfeI CAATTG 1 cut(s) 930
MhlI GDGCHC 9 cut(s) 68, 189, 195, 399, 510, 660, 728, 1530, 1875
Mly113I GGCGCC 1 cut(s) 257
MlyI GAGTC 2 cut(s) 335, 780
MmeI TCCRAC 5 cut(s) 922, 1445, 1597, 1845, 2089
Mph1103I ATGCAT 1 cut(s) 1258
MroI TCCGGA 1 cut(s) 58
MroNI GCCGGC 1 cut(s) 271
MseI TTAA 5 cut(s) 587, 804, 1259, 1514, 2116
MslI CAYNNNNRTG 2 cut(s) 1547, 1663
MunI CAATTG 1 cut(s) 930
Mva1269I GAATGC 2 cut(s) 352, 1943
MvaI CCWGG 5 cut(s) 88, 1414, 1428, 1964, 1980
MvnI CGCG 1 cut(s) 34
MwoI GCNNNNNNNGC 8 cut(s) 40, 263, 272, 380, 389, 403, 857, 1685
NaeI GCCGGC 1 cut(s) 273
NarI GGCGCC 1 cut(s) 257
NcoI CCATGG 1 cut(s) 1271
NdeI CATATG 1 cut(s) 495
NdeII GATC 6 cut(s) 196, 295, 701, 903, 1198, 1446
NgoMIV GCCGGC 1 cut(s) 271
NmeAIII GCCGAG 1 cut(s) 435
NmuCI GTSAC 3 cut(s) 673, 921, 1540
NsiI ATGCAT 1 cut(s) 1258
NspI RCATGY 1 cut(s) 1217
OliI CACNNNNGTG 1 cut(s) 1663
PaeR7I CTCGAG 1 cut(s) 200
PagI TCATGA 1 cut(s) 813
PceI AGGCCT 1 cut(s) 1417
PcsI WCGNNNNNNNCGW 1 cut(s) 1993
PctI GAATGC 2 cut(s) 352, 1943
PdiI GCCGGC 1 cut(s) 273
PfeI GAWTC 3 cut(s) 143, 549, 1370
PflMI CCANNNNNTGG 3 cut(s) 977, 1427, 1648
PfoI TCCNGGA 1 cut(s) 1962
PleI GAGTC 2 cut(s) 334, 780
PluTI GGCGCC 1 cut(s) 260
PpsI GAGTC 2 cut(s) 334, 780
PshAI GACNNNNGTC 1 cut(s) 883
Psp124BI GAGCTC 1 cut(s) 510
Psp6I CCWGG 5 cut(s) 86, 1412, 1426, 1962, 1978
PspGI CCWGG 5 cut(s) 86, 1412, 1426, 1962, 1978
PspOMI GGGCCC 2 cut(s) 724, 1871
PstNI CAGNNNCTG 1 cut(s) 1979
RsaI GTAC 6 cut(s) 622, 982, 1176, 1306, 1492, 1977
RsaNI GTAC 6 cut(s) 621, 981, 1175, 1305, 1491, 1976
RseI CAYNNNNRTG 2 cut(s) 1547, 1663
SacI GAGCTC 1 cut(s) 510
SaqAI TTAA 5 cut(s) 587, 804, 1259, 1514, 2116
Sau3AI GATC 6 cut(s) 196, 295, 701, 903, 1198, 1446
SchI GAGTC 2 cut(s) 335, 780
SduI GDGCHC 9 cut(s) 68, 189, 195, 399, 510, 660, 728, 1530, 1875
SfaNI GCATC 6 cut(s) 1190, 1418, 1479, 1640, 1671, 1815
SfcI CTRYAG 2 cut(s) 824, 955
SfoI GGCGCC 1 cut(s) 258
Sfr274I CTCGAG 1 cut(s) 200
SgrAI CRCCGGYG 1 cut(s) 259
SinI GGWCC 3 cut(s) 13, 1503, 2013
SlaI CTCGAG 1 cut(s) 200
SmaI CCCGGG 3 cut(s) 40, 182, 523
SmiMI CAYNNNNRTG 2 cut(s) 1547, 1663
SmlI CTYRAG 2 cut(s) 200, 989
SmoI CTYRAG 2 cut(s) 200, 989
SrfI GCCCGGGC 1 cut(s) 523
SseBI AGGCCT 1 cut(s) 1417
SspDI GGCGCC 1 cut(s) 256
SspI AATATT 1 cut(s) 1741
SspMI CTAG 3 cut(s) 27, 453, 743
SstI GAGCTC 1 cut(s) 510
StuI AGGCCT 1 cut(s) 1417
StyI CCWWGG 1 cut(s) 1271
TaaI ACNGT 5 cut(s) 304, 655, 959, 1235, 1975
TaiI ACGT 4 cut(s) 645, 1714, 1999, 2023
TaqI TCGA 9 cut(s) 5, 201, 341, 578, 650, 1184, 1220, 1237, 1441
TaqII GACCGA 1 cut(s) 1439
TauI GCSGC 5 cut(s) 34, 79, 236, 377, 422
TfiI GAWTC 3 cut(s) 143, 549, 1370
Tru1I TTAA 5 cut(s) 587, 804, 1259, 1514, 2116
Tru9I TTAA 5 cut(s) 587, 804, 1259, 1514, 2116
TscAI CASTG 7 cut(s) 78, 145, 660, 918, 1238, 1325, 1371
TseFI GTSAC 3 cut(s) 673, 921, 1540
TseI GCWGC 7 cut(s) 275, 406, 935, 1655, 1688, 1881, 2065
Tsp45I GTSAC 3 cut(s) 673, 921, 1540
TspDTI ATGAA 7 cut(s) 512, 720, 830, 1241, 1660, 1913, 1914
TspGWI ACGGA 3 cut(s) 372, 1057, 1281
TspMI CCCGGG 3 cut(s) 38, 180, 521
TspRI CASTG 7 cut(s) 78, 145, 660, 918, 1238, 1325, 1371
Van91I CCANNNNNTGG 3 cut(s) 977, 1427, 1648
VneI GTGCAC 1 cut(s) 1526
VpaK11BI GGWCC 3 cut(s) 13, 1503, 2013
XapI RAATTY 2 cut(s) 776, 1261
XceI RCATGY 1 cut(s) 1217
XcmI CCANNNNNNNNNTGG 1 cut(s) 362
XhoI CTCGAG 1 cut(s) 200
XmaI CCCGGG 3 cut(s) 38, 180, 521
XspI CTAG 3 cut(s) 27, 453, 743
Zsp2I ATGCAT 1 cut(s) 1258
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.