pycom11g17420

WLM domain

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Forward (+)
19606280 .. 19608165
1886 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1320 bp
ATGAATCTGGGGGACCTGAACAAGGTGTGGGAAATCAAAACTCTGAAAAGAAAGGATCGGGAAGATGAAGCCAGGAAGATTCTCGAGAAAATTGCCCTACAGGTCCAGCCCATTATGCGCAATCACAGATGGCGCGTCAAGATCCTCTCTGAATTCTGCCCGAACAACCCTCGTCTTCTGGGGTTGAACGTGAACCGCGGCGTGCACGTGAAGCTGAGGCTGCGTAGGCCGAACAAGGATACGGATTTTTATCCCTTTGATCAAGTTCTTGACACAATGCTTCACGAGCTTTGTCACAATGTTCATGGCCCTCACGATGCCAAGTTCTACAAGCTATGGGATGAACTTCGAAAGGAATGTGAGGAGCTGATGGCTAAGGGAATAACTGGCAGTGGAGAGGGGTTTGATCTTCCAGGGAAACGTTTGGGTTTTTCACGTCCGCCTCCTCTTTCTTCTCTCCGGAAAACTGCACTTGCTGCTGCAGAAAAGAGAGTCCTTTTGGGATCCCTGATGTCATCTGGACCTAAGCGTCTTGGTGGTGATAACAGTATTATGTCAGCACTTAGTCCGGTGCAAGCTGCTGCAATGGCTGCAGAGAGGAGATGGCAGGACGATATCTGGTGTGGATCGGTGTCTTTTGAGGCTTCAAAGGATGGAGAATGCAGCCCTGATAAATCAGATAAATCAGAGAACTATGAAAATATAAGGCCAAATGCAGGAAGTTCAATGTCCCACAGTGGTGCAAAAGCACATTCCTCAGATAAATTATTGGGGACTCACAGTGGTGTGAAAGCACATTCCTCAGATAAACTATTGGGCAAAAGAAGTCGTGAACTAAATACCAATAGTCATTTGCAATCTTCCAGATCCAATTTAGGTTACCAATTTGTAGATTTATCGAGGGATGACTCAATATCTGCGTCCATGATCGATTGTGACATCACACCGCAAAAGAGAAGTCGAGAATCAGGAAACAGTTCAATATTTCATTCCAATCATAATTCTAGATCTAGTGTAGAGGATATGTTGGGCGTTTCATCTTCTGGCTCCATGTCTAAGAATGAAGGAACACATAACCCAGAAGCAACTGCTCTTTGGCAGTGTGGAACGTGCACTTTACTGAATCCCCCGTTAGCTCCAATATGCGAGGTTTGTAACGCAATGAAACCAAAGGATGTTGGTTCAAATTATAAATTCTGGTCCTGTAGATTCTGCACTTTGGAAAACTGTGTGAAGTTAGAGAAATGCTCAGCATGTGATCAGTGGAGATATTCACACGGCGCACCAATAGCAAGCCACGCACCAAATCTGGGCACTTGA

Protein Analysis

440

Amino Acids

48.74

Weight (kDa)

8.87

Isoelectric Point (pI)

56.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WLM PF08325 8 - 202 5.9e-65 WLM domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1191
AasI GACNNNNNNGTC 1 cut(s) 528
Acc16I TGCGCA 1 cut(s) 119
AccII CGCG 2 cut(s) 135, 198
AccIII TCCGGA 1 cut(s) 459
AciI CCGC 4 cut(s) 196, 198, 440, 947
AclI AACGTT 1 cut(s) 421
AclWI GGATC 6 cut(s) 63, 136, 498, 511, 634, 861
AcsI RAATTY 2 cut(s) 152, 1193
AcvI CACGTG 1 cut(s) 208
AfiI CCNNNNNNNGG 3 cut(s) 22, 716, 1310
AgsI TTSAA 5 cut(s) 187, 648, 726, 981, 1185
AjiI CACGTC 1 cut(s) 437
AjnI CCWGG 2 cut(s) 71, 412
AleI CACNNNNGTG 2 cut(s) 738, 783
AluBI AGCT 6 cut(s) 214, 289, 334, 367, 578, 1136
AluI AGCT 6 cut(s) 214, 289, 334, 367, 578, 1136
Alw21I GWGCWC 2 cut(s) 207, 1115
Alw44I GTGCAC 2 cut(s) 203, 1111
AlwI GGATC 6 cut(s) 63, 136, 498, 511, 634, 861
Ama87I CYCGRG 1 cut(s) 83
Aor13HI TCCGGA 1 cut(s) 459
AoxI GGCC 3 cut(s) 227, 307, 707
ApaLI GTGCAC 2 cut(s) 203, 1111
ApeKI GCWGC 7 cut(s) 220, 476, 479, 578, 581, 590, 663
ApoI RAATTY 2 cut(s) 152, 1193
ArsI GACNNNNNNTTYG 2 cut(s) 943, 975
Asp700I GAANNNNTTC 1 cut(s) 976
AspLEI GCGC 3 cut(s) 120, 135, 1283
AspS9I GGNCC 5 cut(s) 13, 103, 308, 521, 1200
AsuHPI GGTGA 1 cut(s) 551
AsuII TTCGAA 1 cut(s) 349
AvaI CYCGRG 1 cut(s) 83
AvaII GGWCC 4 cut(s) 13, 103, 521, 1200
BaeGI GKGCMC 3 cut(s) 207, 1115, 1316
BamHI GGATCC 1 cut(s) 503
BauI CACGAG 1 cut(s) 284
BbrPI CACGTG 1 cut(s) 208
BbsI GAAGAC 1 cut(s) 167
Bbv12I GWGCWC 2 cut(s) 207, 1115
BbvCI CCTCAGC 1 cut(s) 215
BbvI GCAGC 7 cut(s) 207, 463, 466, 565, 568, 577, 675
BccI CCATC 4 cut(s) 123, 364, 597, 647
BceAI ACGGC 1 cut(s) 1294
BcgI CGANNNNNNTGC 2 cut(s) 74, 108
BciT130I CCWGG 2 cut(s) 73, 414
BciVI GTATCC 1 cut(s) 232
BclI TGATCA 2 cut(s) 259, 1258
BfaI CTAG 2 cut(s) 1005, 1011
BfmI CTRYAG 4 cut(s) 98, 480, 591, 1204
BfuI GTATCC 1 cut(s) 232
BglII AGATCT 1 cut(s) 1007
BisI GCNGC 8 cut(s) 199, 221, 477, 480, 579, 582, 591, 664
BlpI GCTNAGC 1 cut(s) 1249
BlsI GCNGC 8 cut(s) 200, 222, 478, 481, 580, 583, 592, 665
Bme1390I CCNGG 2 cut(s) 73, 414
Bme18I GGWCC 4 cut(s) 13, 103, 521, 1200
BmeT110I CYCGRG 1 cut(s) 83
BmgBI CACGTC 1 cut(s) 437
BmgT120I GGNCC 5 cut(s) 13, 103, 308, 521, 1200
BmiI GGNNCC 3 cut(s) 14, 505, 1048
BmrFI CCNGG 2 cut(s) 73, 414
BmsI GCATC 1 cut(s) 307
BpiI GAAGAC 1 cut(s) 167
BplI GAGNNNNNCTC 2 cut(s) 1232, 1264
Bpu10I CCTNAGC 3 cut(s) 215, 375, 525
Bpu1102I GCTNAGC 1 cut(s) 1249
Bpu14I TTCGAA 1 cut(s) 349
Bsa29I ATCGAT 1 cut(s) 930
BsaAI YACGTR 1 cut(s) 208
BsaBI GATNNNNATC 1 cut(s) 249
BsaJI CCNNGG 2 cut(s) 196, 413
BsaWI WCCGGW 2 cut(s) 459, 568
Bsc4I CCNNNNNNNGG 3 cut(s) 22, 716, 1310
Bse1I ACTGG 1 cut(s) 391
Bse3DI GCAATG 2 cut(s) 591, 1167
Bse8I GATNNNNATC 1 cut(s) 249
BseAI TCCGGA 1 cut(s) 459
BseBI CCWGG 2 cut(s) 73, 414
BseCI ATCGAT 1 cut(s) 930
BseDI CCNNGG 2 cut(s) 196, 413
BseGI GGATG 4 cut(s) 346, 658, 910, 1180
BseJI GATNNNNATC 1 cut(s) 249
BseLI CCNNNNNNNGG 3 cut(s) 22, 716, 1310
BseMI GCAATG 2 cut(s) 591, 1167
BseMII CTCAG 4 cut(s) 206, 771, 816, 1263
BseNI ACTGG 1 cut(s) 391
BseRI GAGGAG 3 cut(s) 377, 435, 613
BseSI GKGCMC 3 cut(s) 207, 1115, 1316
BseXI GCAGC 7 cut(s) 207, 463, 466, 565, 568, 577, 675
BsgI GTGCAG 2 cut(s) 453, 1198
Bsh1236I CGCG 2 cut(s) 135, 198
BshFI GGCC 3 cut(s) 229, 309, 709
BshVI ATCGAT 1 cut(s) 930
BsiHKAI GWGCWC 2 cut(s) 207, 1115
BsiHKCI CYCGRG 1 cut(s) 83
BsiSI CCGG 2 cut(s) 460, 569
BslFI GGGAC 3 cut(s) 26, 715, 787
BslI CCNNNNNNNGG 3 cut(s) 22, 716, 1310
BsmFI GGGAC 3 cut(s) 26, 715, 787
BsmI GAATGC 1 cut(s) 665
BsnI GGCC 3 cut(s) 229, 309, 709
BsoBI CYCGRG 1 cut(s) 83
Bsp119I TTCGAA 1 cut(s) 349
Bsp1286I GDGCHC 3 cut(s) 207, 1115, 1316
Bsp13I TCCGGA 1 cut(s) 459
Bsp1720I GCTNAGC 1 cut(s) 1249
BspACI CCGC 4 cut(s) 196, 198, 440, 947
BspANI GGCC 3 cut(s) 229, 309, 709
BspCNI CTCAG 4 cut(s) 207, 770, 815, 1262
BspDI ATCGAT 1 cut(s) 930
BspEI TCCGGA 1 cut(s) 459
BspFNI CGCG 2 cut(s) 135, 198
BspLI GGNNCC 3 cut(s) 14, 505, 1048
BspMAI CTGCAG 2 cut(s) 484, 595
BspPI GGATC 6 cut(s) 63, 136, 498, 511, 634, 861
BspT104I TTCGAA 1 cut(s) 349
BsrDI GCAATG 2 cut(s) 591, 1167
BsrI ACTGG 1 cut(s) 391
BssECI CCNNGG 2 cut(s) 196, 413
BssSI CACGAG 1 cut(s) 284
Bst2BI CACGAG 1 cut(s) 284
Bst2UI CCWGG 2 cut(s) 73, 414
Bst4CI ACNGT 5 cut(s) 548, 737, 782, 977, 1229
BstAPI GCANNNNNTGC 2 cut(s) 476, 590
BstBAI YACGTR 1 cut(s) 208
BstBI TTCGAA 1 cut(s) 349
BstC8I GCNNGC 3 cut(s) 203, 576, 1294
BstDEI CTNAG 8 cut(s) 215, 375, 525, 563, 757, 802, 1056, 1249
BstDSI CCRYGG 1 cut(s) 196
BstEII GGTNACC 1 cut(s) 878
BstENI CCTNNNNNAGG 1 cut(s) 20
BstF5I GGATG 4 cut(s) 346, 658, 910, 1180
BstFNI CGCG 2 cut(s) 135, 198
BstHHI GCGC 3 cut(s) 120, 135, 1283
BstNI CCWGG 2 cut(s) 73, 414
BstNSI RCATGY 1 cut(s) 1257
BstPI GGTNACC 1 cut(s) 878
BstSCI CCNGG 2 cut(s) 71, 412
BstSFI CTRYAG 4 cut(s) 98, 480, 591, 1204
BstSLI GKGCMC 3 cut(s) 207, 1115, 1316
BstUI CGCG 2 cut(s) 135, 198
BstV1I GCAGC 7 cut(s) 207, 463, 466, 565, 568, 577, 675
BstV2I GAAGAC 1 cut(s) 167
BstX2I RGATCY 4 cut(s) 141, 503, 866, 1007
BstYI RGATCY 4 cut(s) 141, 503, 866, 1007
Bsu15I ATCGAT 1 cut(s) 930
BsuI GTATCC 1 cut(s) 232
BsuRI GGCC 3 cut(s) 229, 309, 709
BsuTUI ATCGAT 1 cut(s) 930
BtgI CCRYGG 1 cut(s) 196
BtrI CACGTC 1 cut(s) 437
BtsCI GGATG 4 cut(s) 346, 658, 910, 1180
BtsI GCAGTG 2 cut(s) 397, 1106
BtsIMutI CAGTG 5 cut(s) 397, 742, 787, 1106, 1268
Cac8I GCNNGC 3 cut(s) 203, 576, 1294
CfoI GCGC 3 cut(s) 120, 135, 1283
Cfr13I GGNCC 5 cut(s) 13, 103, 308, 521, 1200
Cfr42I CCGCGG 1 cut(s) 199
ClaI ATCGAT 1 cut(s) 930
CseI GACGC 3 cut(s) 124, 518, 909
CviAII CATG 4 cut(s) 305, 925, 1051, 1254
DdeI CTNAG 8 cut(s) 215, 375, 525, 563, 757, 802, 1056, 1249
DrdI GACNNNNNNGTC 1 cut(s) 528
DseDI GACNNNNNNGTC 1 cut(s) 528
EciI GGCGGA 1 cut(s) 429
Eco32I GATATC 1 cut(s) 616
Eco47I GGWCC 4 cut(s) 13, 103, 521, 1200
Eco72I CACGTG 1 cut(s) 208
Eco88I CYCGRG 1 cut(s) 83
Eco91I GGTNACC 1 cut(s) 878
EcoNI CCTNNNNNAGG 1 cut(s) 20
EcoO109I RGGNCCY 1 cut(s) 13
EcoO65I GGTNACC 1 cut(s) 878
EcoRI GAATTC 1 cut(s) 152
EcoRII CCWGG 2 cut(s) 71, 412
EcoRV GATATC 1 cut(s) 616
FaeI CATG 4 cut(s) 308, 928, 1054, 1257
FaqI GGGAC 3 cut(s) 26, 715, 787
FatI CATG 4 cut(s) 304, 924, 1050, 1253
FbaI TGATCA 2 cut(s) 259, 1258
Fnu4HI GCNGC 8 cut(s) 199, 221, 477, 480, 579, 582, 591, 664
FokI GGATG 4 cut(s) 353, 665, 917, 1187
Fsp4HI GCNGC 8 cut(s) 199, 221, 477, 480, 579, 582, 591, 664
FspBI CTAG 2 cut(s) 1005, 1011
FspI TGCGCA 1 cut(s) 119
GlaI GCGC 3 cut(s) 119, 134, 1282
GluI GCNGC 8 cut(s) 199, 221, 477, 480, 579, 582, 591, 664
HaeIII GGCC 3 cut(s) 229, 309, 709
HapII CCGG 2 cut(s) 460, 569
HgaI GACGC 3 cut(s) 124, 518, 909
HhaI GCGC 3 cut(s) 120, 135, 1283
Hin1II CATG 4 cut(s) 308, 928, 1054, 1257
Hin6I GCGC 3 cut(s) 118, 133, 1281
HinP1I GCGC 3 cut(s) 118, 133, 1281
HinfI GANTC 8 cut(s) 4, 79, 492, 775, 908, 965, 1123, 1209
HpaII CCGG 2 cut(s) 460, 569
HphI GGTGA 1 cut(s) 551
Hpy166II GTNNAC 4 cut(s) 193, 205, 833, 1113
Hpy188I TCNGA 6 cut(s) 45, 151, 679, 688, 760, 805
Hpy8I GTNNAC 4 cut(s) 193, 205, 833, 1113
HpyAV CCTTC 1 cut(s) 1058
HpyCH4III ACNGT 5 cut(s) 548, 737, 782, 977, 1229
HpyCH4IV ACGT 5 cut(s) 189, 207, 421, 436, 1109
HpyF3I CTNAG 8 cut(s) 215, 375, 525, 563, 757, 802, 1056, 1249
HpySE526I ACGT 5 cut(s) 189, 207, 421, 436, 1109
Hsp92II CATG 4 cut(s) 308, 928, 1054, 1257
HspAI GCGC 3 cut(s) 118, 133, 1281
Kpn2I TCCGGA 1 cut(s) 459
Ksp22I TGATCA 2 cut(s) 259, 1258
KspI CCGCGG 1 cut(s) 199
LmnI GCTCC 3 cut(s) 364, 1052, 1141
Lsp1109I GCAGC 7 cut(s) 207, 463, 466, 565, 568, 577, 675
LweI GCATC 1 cut(s) 307
MaeI CTAG 2 cut(s) 1005, 1011
MaeII ACGT 5 cut(s) 189, 207, 421, 436, 1109
MaeIII GTNAC 4 cut(s) 293, 878, 935, 1154
MboII GAAGA 7 cut(s) 74, 88, 167, 401, 444, 852, 1032
MflI RGATCY 4 cut(s) 141, 503, 866, 1007
MhlI GDGCHC 3 cut(s) 207, 1115, 1316
MluCI AATT 8 cut(s) 90, 152, 764, 871, 884, 1000, 1186, 1193
MlyI GAGTC 3 cut(s) 501, 769, 902
MroI TCCGGA 1 cut(s) 459
MroXI GAANNNNTTC 1 cut(s) 976
MslI CAYNNNNRTG 2 cut(s) 738, 783
MspA1I CMGCKG 1 cut(s) 198
MspI CCGG 2 cut(s) 460, 569
MspR9I CCNGG 2 cut(s) 73, 414
Mva1269I GAATGC 1 cut(s) 665
MvaI CCWGG 2 cut(s) 73, 414
MvnI CGCG 2 cut(s) 135, 198
NlaIII CATG 4 cut(s) 308, 928, 1054, 1257
NlaIV GGNNCC 3 cut(s) 14, 505, 1048
NmuCI GTSAC 2 cut(s) 293, 935
NsbI TGCGCA 1 cut(s) 119
NspI RCATGY 1 cut(s) 1257
NspV TTCGAA 1 cut(s) 349
OliI CACNNNNGTG 2 cut(s) 738, 783
PaeR7I CTCGAG 1 cut(s) 83
PctI GAATGC 1 cut(s) 665
PdmI GAANNNNTTC 1 cut(s) 976
PfeI GAWTC 5 cut(s) 4, 79, 965, 1123, 1209
PkrI GCNGC 8 cut(s) 200, 222, 478, 481, 580, 583, 592, 665
PleI GAGTC 3 cut(s) 500, 769, 902
PmaCI CACGTG 1 cut(s) 208
PmlI CACGTG 1 cut(s) 208
PpsI GAGTC 3 cut(s) 500, 769, 902
Ppu21I YACGTR 1 cut(s) 208
PpuMI RGGWCCY 1 cut(s) 13
PsiI TTATAA 1 cut(s) 1191
Psp1406I AACGTT 1 cut(s) 421
Psp5II RGGWCCY 1 cut(s) 13
Psp6I CCWGG 2 cut(s) 71, 412
PspCI CACGTG 1 cut(s) 208
PspEI GGTNACC 1 cut(s) 878
PspGI CCWGG 2 cut(s) 71, 412
PspN4I GGNNCC 3 cut(s) 14, 505, 1048
PspPI GGNCC 5 cut(s) 13, 103, 308, 521, 1200
PspPPI RGGWCCY 1 cut(s) 13
PstI CTGCAG 2 cut(s) 484, 595
PsuI RGATCY 4 cut(s) 141, 503, 866, 1007
RseI CAYNNNNRTG 2 cut(s) 738, 783
SacII CCGCGG 1 cut(s) 199
SatI GCNGC 8 cut(s) 199, 221, 477, 480, 579, 582, 591, 664
Sau96I GGNCC 5 cut(s) 13, 103, 308, 521, 1200
SchI GAGTC 3 cut(s) 501, 769, 902
ScrFI CCNGG 2 cut(s) 73, 414
SduI GDGCHC 3 cut(s) 207, 1115, 1316
SfaNI GCATC 1 cut(s) 307
SfcI CTRYAG 4 cut(s) 98, 480, 591, 1204
Sfr274I CTCGAG 1 cut(s) 83
Sfr303I CCGCGG 1 cut(s) 199
SfuI TTCGAA 1 cut(s) 349
SgrBI CCGCGG 1 cut(s) 199
SinI GGWCC 4 cut(s) 13, 103, 521, 1200
SlaI CTCGAG 1 cut(s) 83
SmiMI CAYNNNNRTG 2 cut(s) 738, 783
SmlI CTYRAG 1 cut(s) 83
SmoI CTYRAG 1 cut(s) 83
Sse9I AATT 8 cut(s) 90, 152, 764, 871, 884, 1000, 1186, 1193
SsiI CCGC 4 cut(s) 196, 198, 440, 947
SspI AATATT 1 cut(s) 984
SspMI CTAG 2 cut(s) 1005, 1011
StyD4I CCNGG 2 cut(s) 71, 412
TaaI ACNGT 5 cut(s) 548, 737, 782, 977, 1229
TaiI ACGT 5 cut(s) 192, 210, 424, 439, 1112
TaqI TCGA 5 cut(s) 84, 349, 899, 930, 961
TasI AATT 8 cut(s) 90, 152, 764, 871, 884, 1000, 1186, 1193
TauI GCSGC 1 cut(s) 201
TfiI GAWTC 5 cut(s) 4, 79, 965, 1123, 1209
TscAI CASTG 5 cut(s) 397, 742, 787, 1106, 1268
TseFI GTSAC 2 cut(s) 293, 935
TseI GCWGC 7 cut(s) 220, 476, 479, 578, 581, 590, 663
Tsp45I GTSAC 2 cut(s) 293, 935
TspDTI ATGAA 9 cut(s) 17, 81, 293, 357, 711, 977, 1026, 1077, 1178
TspGWI ACGGA 1 cut(s) 257
TspRI CASTG 5 cut(s) 397, 742, 787, 1106, 1268
VneI GTGCAC 2 cut(s) 203, 1111
VpaK11BI GGWCC 4 cut(s) 13, 103, 521, 1200
XagI CCTNNNNNAGG 1 cut(s) 20
XapI RAATTY 2 cut(s) 152, 1193
XbaI TCTAGA 1 cut(s) 1004
XceI RCATGY 1 cut(s) 1257
XhoI CTCGAG 1 cut(s) 83
XmnI GAANNNNTTC 1 cut(s) 976
XspI CTAG 2 cut(s) 1005, 1011
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.