pycom11g23010

Belongs to the glycosyltransferase 31 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0009248
Physical Location & Seq
Forward (+)
26022857 .. 26026593
3737 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1059 bp
ATGCCTTCATCCCCCAAGTTCTTCCACGCACGCCAACCTCCCTCCACTCTCAGACCAACAGTTCTGATCGTCGCCTTCTCCCTGGTCTTCGGACTCTCCGGGTTCATCTTCGGAATCGTCTCGGTTCTCCACCCTAGCCAGTACAGGTGCCTGACCGGCAACGCCAGATCGGTGAAGGTGGTTTGGGAGAAAAGTGGCGGCGGCGGCGGCGGCAGCAGCACTCAAAACGGTCTCGTTTCGGGGGTTGGAGATGGAAATGACGAGAACAAGAGGCATAAAGTCATGGGCTTTGTGGGGATACAGACCGGGTTTCGATCCACTGGTCGTAGACAGTCCTTGAGGAAGACTTGGATGCCGTCCAATACACAGGGGCTTCAACGCTTGGAAGAAGCCACTGGTTTGGCTTTCAGGTTTGTGATTGGTAAAACCAAGGATAAAGCAAAGATGGCAGAACTCTCTAAAGAGGTGGCCAAATATGATGATTTCGTGCTATTGGATATTGAAGAGGAGTACAGCAAGCTCCCCTACAAAACGTTGGCTTTCTTCAAAGCTGCCTATGCACTTTATGATGCTGACTTCTATGTTAAAGCTGATGACGACATATACTTAAGGCCAGATCGCCTTTCACTGCTTTTGGCAAAAGAGCGTTCTCACTCTCAGACTTACCTTGGGTGCATGAAAAAGGGCCCAGTCTTCACTGACCCGAATCTTAAGTGGTATGAGCCACTTTCCTATTTGCTTGGAAGCGAGTACTTTCTCCATGCCTATGGTCCAATATATGCTCTTTCTGCAGATGTTGTTGCAAGTTTGGTTGCTCTTAGAAACAATAGTTTTCGAATGTTTAGCAATGAGGATGTCACAATTGGTGCATGGATGCTTGCAATGAATGTCAACCAAGAGAACAATAAAGCATTGTGCTCACCGCGGTGTACATCATCATCTATTGCAGTGTGGGATATTCCGAAGTGCTCTGGGCTGTGCAACCCAGAAACCAAATTGCTAGAACTCCACCAGCAGGATAGCTGCTCAAAAACTCCAACAGTGGAATCTGATGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0012505 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Galactosyl_T

Protein Analysis

353

Amino Acids

39.09

Weight (kDa)

8.68

Isoelectric Point (pI)

47.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Galactosyl_T PF01762 109 - 302 6.5e-50 Galactosyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 147
AccI GTMKAC 1 cut(s) 328
AccII CGCG 1 cut(s) 925
AciI CCGC 7 cut(s) 198, 201, 204, 207, 210, 923, 925
AclI AACGTT 1 cut(s) 533
AclWI GGATC 1 cut(s) 309
AcoI YGGCCR 1 cut(s) 468
AfaI GTAC 4 cut(s) 143, 512, 752, 931
AfiI CCNNNNNNNGG 1 cut(s) 1015
AflII CTTAAG 2 cut(s) 607, 710
AgsI TTSAA 3 cut(s) 377, 503, 547
AjnI CCWGG 1 cut(s) 81
AleI CACNNNNGTG 1 cut(s) 925
AluBI AGCT 4 cut(s) 520, 551, 590, 1023
AluI AGCT 4 cut(s) 520, 551, 590, 1023
Alw21I GWGCWC 2 cut(s) 920, 971
Alw26I GTCTC 2 cut(s) 124, 236
AlwI GGATC 1 cut(s) 309
AoxI GGCC 3 cut(s) 468, 611, 685
ApaI GGGCCC 1 cut(s) 689
ApeKI GCWGC 4 cut(s) 213, 216, 551, 1023
AspS9I GGNCC 3 cut(s) 685, 686, 770
AsuC2I CCSGG 2 cut(s) 100, 307
AsuHPI GGTGA 2 cut(s) 184, 912
AsuII TTCGAA 1 cut(s) 835
AvaII GGWCC 1 cut(s) 770
BaeGI GKGCMC 1 cut(s) 689
BalI TGGCCA 1 cut(s) 470
BanI GGYRCC 1 cut(s) 147
BanII GRGCYC 1 cut(s) 689
BbsI GAAGAC 3 cut(s) 79, 350, 685
Bbv12I GWGCWC 2 cut(s) 920, 971
BbvI GCAGC 4 cut(s) 225, 228, 538, 1010
BccI CCATC 2 cut(s) 245, 439
BceAI ACGGC 1 cut(s) 340
BciT130I CCWGG 1 cut(s) 83
BciVI GTATCC 1 cut(s) 291
BcnI CCSGG 2 cut(s) 100, 307
BcoDI GTCTC 2 cut(s) 124, 236
BfaI CTAG 2 cut(s) 135, 1001
BfmI CTRYAG 1 cut(s) 789
BfrI CTTAAG 2 cut(s) 607, 710
BfuI GTATCC 1 cut(s) 291
BglI GCCNNNNNGGC 1 cut(s) 156
BisI GCNGC 9 cut(s) 199, 202, 205, 208, 211, 214, 217, 552, 1024
BlsI GCNGC 9 cut(s) 200, 203, 206, 209, 212, 215, 218, 553, 1025
BmcAI AGTACT 1 cut(s) 752
Bme1390I CCNGG 3 cut(s) 83, 100, 307
Bme18I GGWCC 1 cut(s) 770
BmgT120I GGNCC 3 cut(s) 685, 686, 770
BmiI GGNNCC 2 cut(s) 149, 687
BmrFI CCNGG 3 cut(s) 83, 100, 307
BmrI ACTGGG 1 cut(s) 683
BmsI GCATC 3 cut(s) 342, 559, 864
BmuI ACTGGG 1 cut(s) 683
BpiI GAAGAC 3 cut(s) 79, 350, 685
Bpu14I TTCGAA 1 cut(s) 835
BpuEI CTTGAG 1 cut(s) 358
BpuMI CCSGG 2 cut(s) 100, 307
BsaI GGTCTC 1 cut(s) 236
BsaJI CCNNGG 4 cut(s) 81, 429, 667, 923
Bsc4I CCNNNNNNNGG 1 cut(s) 1015
Bse118I RCCGGY 1 cut(s) 155
Bse1I ACTGG 4 cut(s) 139, 325, 400, 689
Bse3DI GCAATG 2 cut(s) 853, 888
BseBI CCWGG 1 cut(s) 83
BseDI CCNNGG 4 cut(s) 81, 429, 667, 923
BseGI GGATG 4 cut(s) 8, 357, 859, 879
BseLI CCNNNNNNNGG 1 cut(s) 1015
BseMI GCAATG 2 cut(s) 853, 888
BseMII CTCAG 2 cut(s) 64, 671
BseNI ACTGG 4 cut(s) 139, 325, 400, 689
BseRI GAGGAG 1 cut(s) 521
BseSI GKGCMC 1 cut(s) 689
BseXI GCAGC 4 cut(s) 225, 228, 538, 1010
Bsh1236I CGCG 1 cut(s) 925
BshFI GGCC 3 cut(s) 470, 613, 687
BshNI GGYRCC 1 cut(s) 147
BsiHKAI GWGCWC 2 cut(s) 920, 971
BsiSI CCGG 3 cut(s) 99, 156, 306
BslI CCNNNNNNNGG 1 cut(s) 1015
BsmAI GTCTC 2 cut(s) 124, 236
BsmBI CGTCTC 1 cut(s) 124
BsnI GGCC 3 cut(s) 470, 613, 687
Bso31I GGTCTC 1 cut(s) 236
Bsp119I TTCGAA 1 cut(s) 835
Bsp120I GGGCCC 1 cut(s) 685
Bsp1286I GDGCHC 3 cut(s) 689, 920, 971
Bsp1407I TGTACA 1 cut(s) 929
Bsp143I GATC 4 cut(s) 66, 167, 314, 616
BspACI CCGC 7 cut(s) 198, 201, 204, 207, 210, 923, 925
BspANI GGCC 3 cut(s) 470, 613, 687
BspCNI CTCAG 2 cut(s) 63, 670
BspFNI CGCG 1 cut(s) 925
BspLI GGNNCC 2 cut(s) 149, 687
BspMAI CTGCAG 1 cut(s) 793
BspPI GGATC 1 cut(s) 309
BspT104I TTCGAA 1 cut(s) 835
BspT107I GGYRCC 1 cut(s) 147
BspTI CTTAAG 2 cut(s) 607, 710
BspTNI GGTCTC 1 cut(s) 236
BsrDI GCAATG 2 cut(s) 853, 888
BsrFI RCCGGY 1 cut(s) 155
BsrGI TGTACA 1 cut(s) 929
BsrI ACTGG 4 cut(s) 139, 325, 400, 689
BssAI RCCGGY 1 cut(s) 155
BssECI CCNNGG 4 cut(s) 81, 429, 667, 923
BssMI GATC 4 cut(s) 66, 167, 314, 616
BssT1I CCWWGG 2 cut(s) 429, 667
Bst2UI CCWGG 1 cut(s) 83
Bst4CI ACNGT 4 cut(s) 61, 230, 333, 1042
Bst6I CTCTTC 1 cut(s) 498
BstAFI CTTAAG 2 cut(s) 607, 710
BstAUI TGTACA 1 cut(s) 929
BstBI TTCGAA 1 cut(s) 835
BstC8I GCNNGC 3 cut(s) 31, 518, 879
BstDEI CTNAG 3 cut(s) 50, 657, 818
BstDSI CCRYGG 1 cut(s) 923
BstF5I GGATG 4 cut(s) 8, 357, 859, 879
BstFNI CGCG 1 cut(s) 925
BstKTI GATC 4 cut(s) 69, 170, 317, 619
BstMAI GTCTC 2 cut(s) 124, 236
BstMBI GATC 4 cut(s) 66, 167, 314, 616
BstMWI GCNNNNNNNGC 9 cut(s) 156, 204, 207, 210, 213, 216, 446, 557, 788
BstNI CCWGG 1 cut(s) 83
BstSCI CCNGG 3 cut(s) 81, 98, 305
BstSFI CTRYAG 1 cut(s) 789
BstSLI GKGCMC 1 cut(s) 689
BstUI CGCG 1 cut(s) 925
BstV1I GCAGC 4 cut(s) 225, 228, 538, 1010
BstV2I GAAGAC 3 cut(s) 79, 350, 685
BstXI CCANNNNNNTGG 2 cut(s) 400, 767
BsuI GTATCC 1 cut(s) 291
BsuRI GGCC 3 cut(s) 470, 613, 687
BtgI CCRYGG 1 cut(s) 923
BtsCI GGATG 4 cut(s) 8, 357, 859, 879
BtsI GCAGTG 2 cut(s) 626, 954
BtsIMutI CAGTG 6 cut(s) 318, 393, 626, 696, 954, 1047
Cac8I GCNNGC 3 cut(s) 31, 518, 879
Cfr10I RCCGGY 1 cut(s) 155
Cfr13I GGNCC 3 cut(s) 685, 686, 770
Cfr42I CCGCGG 1 cut(s) 926
Csp6I GTAC 4 cut(s) 142, 511, 751, 930
CviAII CATG 4 cut(s) 283, 676, 761, 870
CviQI GTAC 4 cut(s) 142, 511, 751, 930
DdeI CTNAG 3 cut(s) 50, 657, 818
DpnI GATC 4 cut(s) 68, 169, 316, 618
DpnII GATC 4 cut(s) 66, 167, 314, 616
EaeI YGGCCR 1 cut(s) 468
Eam1104I CTCTTC 1 cut(s) 498
EarI CTCTTC 1 cut(s) 498
Eco130I CCWWGG 2 cut(s) 429, 667
Eco24I GRGCYC 1 cut(s) 689
Eco31I GGTCTC 1 cut(s) 236
Eco47I GGWCC 1 cut(s) 770
EcoO109I RGGNCCY 1 cut(s) 685
EcoRII CCWGG 1 cut(s) 81
EcoT14I CCWWGG 2 cut(s) 429, 667
EcoT38I GRGCYC 1 cut(s) 689
ErhI CCWWGG 2 cut(s) 429, 667
Esp3I CGTCTC 1 cut(s) 124
FaeI CATG 4 cut(s) 286, 679, 764, 873
FatI CATG 4 cut(s) 282, 675, 760, 869
FblI GTMKAC 1 cut(s) 328
Fnu4HI GCNGC 9 cut(s) 199, 202, 205, 208, 211, 214, 217, 552, 1024
FokI GGATG 3 cut(s) 364, 866, 886
FriOI GRGCYC 1 cut(s) 689
Fsp4HI GCNGC 9 cut(s) 199, 202, 205, 208, 211, 214, 217, 552, 1024
FspBI CTAG 2 cut(s) 135, 1001
GluI GCNGC 9 cut(s) 199, 202, 205, 208, 211, 214, 217, 552, 1024
HaeIII GGCC 3 cut(s) 470, 613, 687
HapII CCGG 3 cut(s) 99, 156, 306
Hin1II CATG 4 cut(s) 286, 679, 764, 873
HincII GTYRAC 1 cut(s) 892
HindII GTYRAC 1 cut(s) 892
HinfI GANTC 4 cut(s) 93, 114, 706, 1046
HpaII CCGG 3 cut(s) 99, 156, 306
HphI GGTGA 2 cut(s) 184, 912
Hpy166II GTNNAC 3 cut(s) 329, 892, 930
Hpy188I TCNGA 7 cut(s) 53, 66, 92, 113, 660, 963, 1051
Hpy8I GTNNAC 3 cut(s) 329, 892, 930
Hpy99I CGWCG 1 cut(s) 74
HpyAV CCTTC 3 cut(s) 15, 85, 169
HpyCH4III ACNGT 4 cut(s) 61, 230, 333, 1042
HpyCH4IV ACGT 1 cut(s) 533
HpyCH4V TGCA 8 cut(s) 560, 675, 791, 803, 869, 881, 947, 981
HpyF10VI GCNNNNNNNGC 9 cut(s) 156, 204, 207, 210, 213, 216, 446, 557, 788
HpyF3I CTNAG 3 cut(s) 50, 657, 818
HpySE526I ACGT 1 cut(s) 533
Hsp92II CATG 4 cut(s) 286, 679, 764, 873
KspI CCGCGG 1 cut(s) 926
Kzo9I GATC 4 cut(s) 66, 167, 314, 616
LmnI GCTCC 1 cut(s) 525
Lsp1109I GCAGC 4 cut(s) 225, 228, 538, 1010
LweI GCATC 3 cut(s) 342, 559, 864
MaeI CTAG 2 cut(s) 135, 1001
MaeII ACGT 1 cut(s) 533
MaeIII GTNAC 1 cut(s) 856
MalI GATC 4 cut(s) 68, 169, 316, 618
MboI GATC 4 cut(s) 66, 167, 314, 616
MboII GAAGA 8 cut(s) 13, 79, 100, 355, 398, 515, 535, 685
MfeI CAATTG 1 cut(s) 861
MhlI GDGCHC 3 cut(s) 689, 920, 971
MlsI TGGCCA 1 cut(s) 470
MluCI AATT 2 cut(s) 861, 995
MluNI TGGCCA 1 cut(s) 470
MlyI GAGTC 1 cut(s) 87
MmeI TCCRAC 1 cut(s) 226
MnlI CCTC 7 cut(s) 48, 52, 264, 333, 457, 499, 844
Mox20I TGGCCA 1 cut(s) 470
MscI TGGCCA 1 cut(s) 470
MseI TTAA 3 cut(s) 585, 608, 711
MslI CAYNNNNRTG 2 cut(s) 765, 925
Msp20I TGGCCA 1 cut(s) 470
MspA1I CMGCKG 1 cut(s) 925
MspCI CTTAAG 2 cut(s) 607, 710
MspI CCGG 3 cut(s) 99, 156, 306
MspR9I CCNGG 3 cut(s) 83, 100, 307
MunI CAATTG 1 cut(s) 861
MvaI CCWGG 1 cut(s) 83
MvnI CGCG 1 cut(s) 925
MwoI GCNNNNNNNGC 9 cut(s) 156, 204, 207, 210, 213, 216, 446, 557, 788
NciI CCSGG 2 cut(s) 100, 307
NdeII GATC 4 cut(s) 66, 167, 314, 616
NlaIII CATG 4 cut(s) 286, 679, 764, 873
NlaIV GGNNCC 2 cut(s) 149, 687
NmuCI GTSAC 1 cut(s) 856
NspV TTCGAA 1 cut(s) 835
OliI CACNNNNGTG 1 cut(s) 925
PfeI GAWTC 3 cut(s) 114, 706, 1046
PkrI GCNGC 9 cut(s) 200, 203, 206, 209, 212, 215, 218, 553, 1025
PleI GAGTC 1 cut(s) 87
PpsI GAGTC 1 cut(s) 87
Psp1406I AACGTT 1 cut(s) 533
Psp6I CCWGG 1 cut(s) 81
PspGI CCWGG 1 cut(s) 81
PspN4I GGNNCC 2 cut(s) 149, 687
PspOMI GGGCCC 1 cut(s) 685
PspPI GGNCC 3 cut(s) 685, 686, 770
PstI CTGCAG 1 cut(s) 793
RsaI GTAC 4 cut(s) 143, 512, 752, 931
RsaNI GTAC 4 cut(s) 142, 511, 751, 930
RseI CAYNNNNRTG 2 cut(s) 765, 925
SacII CCGCGG 1 cut(s) 926
SaqAI TTAA 3 cut(s) 585, 608, 711
SatI GCNGC 9 cut(s) 199, 202, 205, 208, 211, 214, 217, 552, 1024
Sau3AI GATC 4 cut(s) 66, 167, 314, 616
Sau96I GGNCC 3 cut(s) 685, 686, 770
ScaI AGTACT 1 cut(s) 752
SchI GAGTC 1 cut(s) 87
ScrFI CCNGG 3 cut(s) 83, 100, 307
SduI GDGCHC 3 cut(s) 689, 920, 971
SfaNI GCATC 3 cut(s) 342, 559, 864
SfcI CTRYAG 1 cut(s) 789
Sfr303I CCGCGG 1 cut(s) 926
SfuI TTCGAA 1 cut(s) 835
SgrBI CCGCGG 1 cut(s) 926
SinI GGWCC 1 cut(s) 770
SmiMI CAYNNNNRTG 2 cut(s) 765, 925
SmlI CTYRAG 3 cut(s) 337, 607, 710
SmoI CTYRAG 3 cut(s) 337, 607, 710
Sse9I AATT 2 cut(s) 861, 995
SsiI CCGC 7 cut(s) 198, 201, 204, 207, 210, 923, 925
SspMI CTAG 2 cut(s) 135, 1001
StyD4I CCNGG 3 cut(s) 81, 98, 305
StyI CCWWGG 2 cut(s) 429, 667
TaaI ACNGT 4 cut(s) 61, 230, 333, 1042
TaiI ACGT 1 cut(s) 536
TaqI TCGA 2 cut(s) 313, 835
TasI AATT 2 cut(s) 861, 995
TatI WGTACW 4 cut(s) 141, 510, 750, 929
TauI GCSGC 5 cut(s) 201, 204, 207, 210, 213
TfiI GAWTC 3 cut(s) 114, 706, 1046
Tru1I TTAA 3 cut(s) 585, 608, 711
Tru9I TTAA 3 cut(s) 585, 608, 711
TscAI CASTG 6 cut(s) 325, 400, 633, 703, 954, 1047
TseFI GTSAC 1 cut(s) 856
TseI GCWGC 4 cut(s) 213, 216, 551, 1023
Tsp45I GTSAC 1 cut(s) 856
TspDTI ATGAA 3 cut(s) 94, 692, 899
TspRI CASTG 6 cut(s) 325, 400, 633, 703, 954, 1047
Vha464I CTTAAG 2 cut(s) 607, 710
VpaK11BI GGWCC 1 cut(s) 770
XmiI GTMKAC 1 cut(s) 328
XspI CTAG 2 cut(s) 135, 1001
ZrmI AGTACT 1 cut(s) 752
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.