pycom11g23430

Gamma-glutamyl

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Reverse (-)
26426179 .. 26430984
4806 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1164 bp
ATGCCCTCCAACTTCCTCACTAATTCCACGTCTACCCCAACGCCCGACCCCTCCGATTCCGCCTCCTCATCCTCCGACGCTCAGTCCGCCGCAGTGTCCCCAAAGACGACACCCGCAGAGATGTGGAGCTGCCTCTGGATTCCTTTCCTAATTTCCCTGTCCAAGGAGCTGAGCTTGGCCAAAGCCCAGTCTACGGTTGTCTTACCAAGTCAACTCGGAACATCCGACTCGTCCTCGGCCAGGTGTACGGCGCCCGACCCCAAGCTCAATTACCGGCCGGTGATCGGCATCCTCAGCCACCCCGGCGACGGCGCGTCCGGCCGGCTCAGCAACGCCTCCACGGCGTCGTATATCGCAGCTTCATATGTCAAGTTCGTCGAATCGGCTGGGGCTCGTGTTATTCCTCTCATCTATAACGAGCCGCGTGATATTCTTTTCCAGAAGCTCGATCTCGTTAATGGCGTGCTTTTCACCGGTGGATGGGCTAAACGTGGGTTGTACTATGATGTTGTTGAGAGAATATTTCAGAAAATTATAGAGAAGAATGACGCTGGAGATCATTTCCCATTATACGCCATCTGCTTAGGTTTTGAACTTCTAACATTGATCATCAGCAAGAACAAGAAAATTCTTGAGTCATTCAGTGCAGTAGATGTGGCGTCAACTTTACAATTTACCGAGAACACCATTATTGAAGGAACTGTATTTCAAAGATTTCCTCCAGACTTGCTTAGGAAGTTGAGTACAGATTGTCTTGTAATGCAAAACCATAAATATGGTATTTCACCAGAGAGGCTTATGGAGAATGAGAATCTGTCTAGTTTCTTTAAGATCTTGACAACTTGTACTGATGAAGATGATAAGGTCTATGTGTCCACTGCACACGCATACAACTATCCTGTGACCGCCTTCCAATGGCATCCAGAGAAAAATGCTTTTGAATGGGGCTTACCAATGATTCCGCACTCAGAGGATGCTATTCAAGTGACTCAGCACGTTGCAAACTTCTTGGTCAGCGAGGCAAGGAAGTCATTAAACAGACCGCCTGTTGGGCAAGTCCTTGACAATCTCATCTACAATTACAGTCCGACTTTTTGTGGGAAGGCTGGGAAGGGATACGACGAAGTTTACATCTTTACACAACCTTCACTCGCTCATTTGTAA

Protein Analysis

388

Amino Acids

42.68

Weight (kDa)

5.65

Isoelectric Point (pI)

38.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_C26 PF07722 93 - 309 1.2e-10 Peptidase C26
GATase PF00117 126 - 313 1.1e-09 Glutamine amidotransferase class-I
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 250
AccI GTMKAC 2 cut(s) 32, 191
AccII CGCG 2 cut(s) 314, 424
AciI CCGC 8 cut(s) 60, 87, 90, 114, 422, 906, 962, 1043
AcoI YGGCCR 4 cut(s) 177, 237, 275, 319
AcsI RAATTY 1 cut(s) 627
AcyI GRCGYC 3 cut(s) 251, 344, 659
AfaI GTAC 4 cut(s) 247, 500, 745, 847
AfiI CCNNNNNNNGG 8 cut(s) 163, 193, 240, 284, 308, 480, 915, 1049
AgeI ACCGGT 1 cut(s) 473
AgsI TTSAA 5 cut(s) 593, 695, 710, 941, 983
AhdI GACNNNNNGTC 2 cut(s) 82, 313
AjiI CACGTC 1 cut(s) 30
AjnI CCWGG 1 cut(s) 239
AluBI AGCT 6 cut(s) 129, 169, 174, 265, 359, 445
AluI AGCT 6 cut(s) 129, 169, 174, 265, 359, 445
AoxI GGCC 4 cut(s) 177, 237, 275, 319
ApeKI GCWGC 2 cut(s) 129, 356
ApoI RAATTY 1 cut(s) 627
AsiGI ACCGGT 1 cut(s) 473
AspLEI GCGC 2 cut(s) 253, 314
AsuC2I CCSGG 1 cut(s) 303
AsuHPI GGTGA 3 cut(s) 292, 463, 777
BalI TGGCCA 1 cut(s) 179
BanI GGYRCC 1 cut(s) 250
BanII GRGCYC 1 cut(s) 394
BauI CACGAG 1 cut(s) 393
BbvCI CCTCAGC 1 cut(s) 293
BbvI GCAGC 2 cut(s) 116, 368
BccI CCATC 2 cut(s) 474, 584
BceAI ACGGC 3 cut(s) 264, 325, 357
BciT130I CCWGG 1 cut(s) 241
BciVI GTATCC 1 cut(s) 1109
BclI TGATCA 1 cut(s) 606
BcnI CCSGG 1 cut(s) 303
BfaI CTAG 1 cut(s) 819
BfoI RGCGCY 1 cut(s) 254
BfuI GTATCC 1 cut(s) 1109
BglI GCCNNNNNGGC 3 cut(s) 303, 341, 1051
BglII AGATCT 1 cut(s) 831
BisI GCNGC 4 cut(s) 90, 130, 357, 422
BlpI GCTNAGC 2 cut(s) 170, 326
BlsI GCNGC 4 cut(s) 91, 131, 358, 423
Bme1390I CCNGG 2 cut(s) 241, 303
BmeRI GACNNNNNGTC 2 cut(s) 82, 313
BmgBI CACGTC 1 cut(s) 30
BmiI GGNNCC 1 cut(s) 252
BmrFI CCNGG 2 cut(s) 241, 303
BmrI ACTGGG 1 cut(s) 181
BmsI GCATC 3 cut(s) 297, 928, 964
BmuI ACTGGG 1 cut(s) 181
BpmI CTGGAG 2 cut(s) 573, 705
Bpu10I CCTNAGC 3 cut(s) 293, 583, 731
Bpu1102I GCTNAGC 2 cut(s) 170, 326
BpuEI CTTGAG 1 cut(s) 653
BpuMI CCSGG 1 cut(s) 303
BsaBI GATNNNNATC 1 cut(s) 287
BsaHI GRCGYC 3 cut(s) 251, 344, 659
BsaJI CCNNGG 4 cut(s) 162, 234, 301, 339
BsaWI WCCGGW 1 cut(s) 473
Bsc4I CCNNNNNNNGG 8 cut(s) 163, 193, 240, 284, 308, 480, 915, 1049
Bse118I RCCGGY 4 cut(s) 273, 277, 321, 473
Bse1I ACTGG 1 cut(s) 187
Bse8I GATNNNNATC 1 cut(s) 287
BseBI CCWGG 1 cut(s) 241
BseDI CCNNGG 4 cut(s) 162, 234, 301, 339
BseGI GGATG 6 cut(s) 68, 221, 288, 485, 919, 979
BseJI GATNNNNATC 1 cut(s) 287
BseLI CCNNNNNNNGG 8 cut(s) 163, 193, 240, 284, 308, 480, 915, 1049
BseMII CTCAG 6 cut(s) 95, 161, 307, 340, 981, 1004
BseNI ACTGG 1 cut(s) 187
BseRI GAGGAG 1 cut(s) 55
BseX3I CGGCCG 2 cut(s) 275, 319
BseXI GCAGC 2 cut(s) 116, 368
BseYI CCCAGC 2 cut(s) 386, 1106
BsgI GTGCAG 2 cut(s) 666, 864
Bsh1236I CGCG 2 cut(s) 314, 424
Bsh1285I CGRYCG 2 cut(s) 278, 322
BshFI GGCC 4 cut(s) 179, 239, 277, 321
BshNI GGYRCC 1 cut(s) 250
BshTI ACCGGT 1 cut(s) 473
BsiEI CGRYCG 2 cut(s) 278, 322
BsiSI CCGG 6 cut(s) 274, 278, 303, 318, 322, 474
BslFI GGGAC 1 cut(s) 82
BslI CCNNNNNNNGG 8 cut(s) 163, 193, 240, 284, 308, 480, 915, 1049
BsmFI GGGAC 1 cut(s) 82
BsnI GGCC 4 cut(s) 179, 239, 277, 321
Bsp1286I GDGCHC 1 cut(s) 394
Bsp143I GATC 5 cut(s) 282, 448, 556, 606, 831
Bsp1720I GCTNAGC 2 cut(s) 170, 326
BspACI CCGC 8 cut(s) 60, 87, 90, 114, 422, 906, 962, 1043
BspANI GGCC 4 cut(s) 179, 239, 277, 321
BspCNI CTCAG 6 cut(s) 94, 162, 306, 339, 980, 1003
BspFNI CGCG 2 cut(s) 314, 424
BspLI GGNNCC 1 cut(s) 252
BspT107I GGYRCC 1 cut(s) 250
BsrFI RCCGGY 4 cut(s) 273, 277, 321, 473
BsrI ACTGG 1 cut(s) 187
BssAI RCCGGY 4 cut(s) 273, 277, 321, 473
BssECI CCNNGG 4 cut(s) 162, 234, 301, 339
BssMI GATC 5 cut(s) 282, 448, 556, 606, 831
BssNI GRCGYC 3 cut(s) 251, 344, 659
BssSI CACGAG 1 cut(s) 393
BssT1I CCWWGG 1 cut(s) 162
Bst2BI CACGAG 1 cut(s) 393
Bst2UI CCWGG 1 cut(s) 241
Bst4CI ACNGT 3 cut(s) 196, 703, 1085
BstACI GRCGYC 3 cut(s) 251, 344, 659
BstC8I GCNNGC 2 cut(s) 323, 464
BstDEI CTNAG 8 cut(s) 81, 170, 293, 326, 583, 731, 967, 990
BstDSI CCRYGG 1 cut(s) 339
BstENI CCTNNNNNAGG 2 cut(s) 161, 238
BstF5I GGATG 6 cut(s) 68, 221, 288, 485, 919, 979
BstFNI CGCG 2 cut(s) 314, 424
BstH2I RGCGCY 1 cut(s) 254
BstHHI GCGC 2 cut(s) 253, 314
BstKTI GATC 5 cut(s) 285, 451, 559, 609, 834
BstMBI GATC 5 cut(s) 282, 448, 556, 606, 831
BstMCI CGRYCG 2 cut(s) 278, 322
BstMWI GCNNNNNNNGC 7 cut(s) 86, 294, 303, 318, 327, 341, 1051
BstNI CCWGG 1 cut(s) 241
BstSCI CCNGG 2 cut(s) 239, 301
BstUI CGCG 2 cut(s) 314, 424
BstV1I GCAGC 2 cut(s) 116, 368
BstX2I RGATCY 1 cut(s) 831
BstXI CCANNNNNNTGG 1 cut(s) 776
BstYI RGATCY 1 cut(s) 831
BstZI CGGCCG 2 cut(s) 275, 319
BsuI GTATCC 1 cut(s) 1109
BsuRI GGCC 4 cut(s) 179, 239, 277, 321
BtgI CCRYGG 1 cut(s) 339
BtrI CACGTC 1 cut(s) 30
BtsCI GGATG 6 cut(s) 68, 221, 288, 485, 919, 979
BtsI GCAGTG 2 cut(s) 99, 876
BtsIMutI CAGTG 3 cut(s) 99, 649, 876
Cac8I GCNNGC 2 cut(s) 323, 464
CfoI GCGC 2 cut(s) 253, 314
Cfr10I RCCGGY 4 cut(s) 273, 277, 321, 473
CseI GACGC 5 cut(s) 86, 303, 333, 557, 648
Csp6I GTAC 4 cut(s) 246, 499, 744, 846
CspAI ACCGGT 1 cut(s) 473
CviQI GTAC 4 cut(s) 246, 499, 744, 846
DdeI CTNAG 8 cut(s) 81, 170, 293, 326, 583, 731, 967, 990
DinI GGCGCC 1 cut(s) 252
DpnI GATC 5 cut(s) 284, 450, 558, 608, 833
DpnII GATC 5 cut(s) 282, 448, 556, 606, 831
DriI GACNNNNNGTC 2 cut(s) 82, 313
EaeI YGGCCR 4 cut(s) 177, 237, 275, 319
EagI CGGCCG 2 cut(s) 275, 319
Eam1105I GACNNNNNGTC 2 cut(s) 82, 313
EciI GGCGGA 2 cut(s) 49, 76
EclXI CGGCCG 2 cut(s) 275, 319
Eco130I CCWWGG 1 cut(s) 162
Eco24I GRGCYC 1 cut(s) 394
Eco52I CGGCCG 2 cut(s) 275, 319
EcoNI CCTNNNNNAGG 2 cut(s) 161, 238
EcoRII CCWGG 1 cut(s) 239
EcoT14I CCWWGG 1 cut(s) 162
EcoT38I GRGCYC 1 cut(s) 394
EgeI GGCGCC 1 cut(s) 252
EheI GGCGCC 1 cut(s) 252
ErhI CCWWGG 1 cut(s) 162
FaqI GGGAC 1 cut(s) 82
FauI CCCGC 1 cut(s) 121
FauNDI CATATG 1 cut(s) 364
FbaI TGATCA 1 cut(s) 606
FblI GTMKAC 2 cut(s) 32, 191
Fnu4HI GCNGC 4 cut(s) 90, 130, 357, 422
FokI GGATG 6 cut(s) 55, 208, 275, 492, 906, 986
FriOI GRGCYC 1 cut(s) 394
Fsp4HI GCNGC 4 cut(s) 90, 130, 357, 422
FspBI CTAG 1 cut(s) 819
GlaI GCGC 2 cut(s) 252, 313
GluI GCNGC 4 cut(s) 90, 130, 357, 422
GsaI CCCAGC 2 cut(s) 390, 1110
GsuI CTGGAG 2 cut(s) 573, 705
HaeII RGCGCY 1 cut(s) 254
HaeIII GGCC 4 cut(s) 179, 239, 277, 321
HapII CCGG 6 cut(s) 274, 278, 303, 318, 322, 474
HgaI GACGC 5 cut(s) 86, 303, 333, 557, 648
HhaI GCGC 2 cut(s) 253, 314
Hin1I GRCGYC 3 cut(s) 251, 344, 659
Hin6I GCGC 2 cut(s) 251, 312
HinP1I GCGC 2 cut(s) 251, 312
HincII GTYRAC 2 cut(s) 212, 663
HindII GTYRAC 2 cut(s) 212, 663
HinfI GANTC 8 cut(s) 56, 139, 227, 380, 635, 811, 958, 988
HpaII CCGG 6 cut(s) 274, 278, 303, 318, 322, 474
HphI GGTGA 3 cut(s) 292, 463, 777
Hpy166II GTNNAC 7 cut(s) 33, 192, 212, 246, 663, 876, 1129
Hpy188I TCNGA 7 cut(s) 55, 76, 218, 226, 528, 970, 1089
Hpy188III TCNNGA 6 cut(s) 136, 439, 632, 722, 835, 923
Hpy8I GTNNAC 7 cut(s) 33, 192, 212, 246, 663, 876, 1129
Hpy99I CGWCG 5 cut(s) 80, 311, 349, 380, 1124
HpyAV CCTTC 5 cut(s) 689, 919, 1096, 1105, 1155
HpyCH4III ACNGT 3 cut(s) 196, 703, 1085
HpyCH4IV ACGT 3 cut(s) 29, 490, 996
HpyCH4V TGCA 4 cut(s) 647, 763, 881, 1001
HpyF10VI GCNNNNNNNGC 7 cut(s) 86, 294, 303, 318, 327, 341, 1051
HpyF3I CTNAG 8 cut(s) 81, 170, 293, 326, 583, 731, 967, 990
HpySE526I ACGT 3 cut(s) 29, 490, 996
Hsp92I GRCGYC 3 cut(s) 251, 344, 659
HspAI GCGC 2 cut(s) 251, 312
KasI GGCGCC 1 cut(s) 250
KroI GCCGGC 1 cut(s) 321
KroNI GCCGGC 1 cut(s) 323
Ksp22I TGATCA 1 cut(s) 606
Kzo9I GATC 5 cut(s) 282, 448, 556, 606, 831
LmnI GCTCC 2 cut(s) 126, 166
Lsp1109I GCAGC 2 cut(s) 116, 368
LweI GCATC 3 cut(s) 297, 928, 964
MaeI CTAG 1 cut(s) 819
MaeII ACGT 3 cut(s) 29, 490, 996
MaeIII GTNAC 2 cut(s) 901, 985
MalI GATC 5 cut(s) 284, 450, 558, 608, 833
MboI GATC 5 cut(s) 282, 448, 556, 606, 831
MboII GAAGA 2 cut(s) 553, 866
MflI RGATCY 1 cut(s) 831
MhlI GDGCHC 1 cut(s) 394
MlsI TGGCCA 1 cut(s) 179
MluCI AATT 7 cut(s) 22, 150, 268, 531, 627, 671, 1078
MluNI TGGCCA 1 cut(s) 179
Mly113I GGCGCC 1 cut(s) 251
MlyI GAGTC 3 cut(s) 221, 644, 982
MmeI TCCRAC 4 cut(s) 33, 99, 249, 1112
Mox20I TGGCCA 1 cut(s) 179
MroNI GCCGGC 1 cut(s) 321
MscI TGGCCA 1 cut(s) 179
MseI TTAA 3 cut(s) 456, 828, 1034
MslI CAYNNNNRTG 1 cut(s) 774
Msp20I TGGCCA 1 cut(s) 179
MspI CCGG 6 cut(s) 274, 278, 303, 318, 322, 474
MspR9I CCNGG 2 cut(s) 241, 303
MvaI CCWGG 1 cut(s) 241
MvnI CGCG 2 cut(s) 314, 424
MwoI GCNNNNNNNGC 7 cut(s) 86, 294, 303, 318, 327, 341, 1051
NaeI GCCGGC 1 cut(s) 323
NarI GGCGCC 1 cut(s) 251
NciI CCSGG 1 cut(s) 303
NdeI CATATG 1 cut(s) 364
NdeII GATC 5 cut(s) 282, 448, 556, 606, 831
NgoMIV GCCGGC 1 cut(s) 321
NlaIV GGNNCC 1 cut(s) 252
NmeAIII GCCGAG 1 cut(s) 215
NmuCI GTSAC 2 cut(s) 901, 985
PcsI WCGNNNNNNNCGW 2 cut(s) 222, 459
PdiI GCCGGC 1 cut(s) 323
PfeI GAWTC 5 cut(s) 56, 139, 380, 811, 958
PinAI ACCGGT 1 cut(s) 473
PkrI GCNGC 4 cut(s) 91, 131, 358, 423
PleI GAGTC 3 cut(s) 221, 643, 982
PluTI GGCGCC 1 cut(s) 254
PpsI GAGTC 3 cut(s) 221, 643, 982
Psp6I CCWGG 1 cut(s) 239
PspFI CCCAGC 2 cut(s) 386, 1106
PspGI CCWGG 1 cut(s) 239
PspN4I GGNNCC 1 cut(s) 252
PsuI RGATCY 1 cut(s) 831
RsaI GTAC 4 cut(s) 247, 500, 745, 847
RsaNI GTAC 4 cut(s) 246, 499, 744, 846
RseI CAYNNNNRTG 1 cut(s) 774
SaqAI TTAA 3 cut(s) 456, 828, 1034
SatI GCNGC 4 cut(s) 90, 130, 357, 422
Sau3AI GATC 5 cut(s) 282, 448, 556, 606, 831
SchI GAGTC 3 cut(s) 221, 644, 982
ScrFI CCNGG 2 cut(s) 241, 303
SduI GDGCHC 1 cut(s) 394
SfaNI GCATC 3 cut(s) 297, 928, 964
SfoI GGCGCC 1 cut(s) 252
SgrAI CRCCGGYG 1 cut(s) 473
SmiMI CAYNNNNRTG 1 cut(s) 774
SmlI CTYRAG 1 cut(s) 632
SmoI CTYRAG 1 cut(s) 632
Sse9I AATT 7 cut(s) 22, 150, 268, 531, 627, 671, 1078
SsiI CCGC 8 cut(s) 60, 87, 90, 114, 422, 906, 962, 1043
SspDI GGCGCC 1 cut(s) 250
SspI AATATT 1 cut(s) 522
SspMI CTAG 1 cut(s) 819
StyD4I CCNGG 2 cut(s) 239, 301
StyI CCWWGG 1 cut(s) 162
TaaI ACNGT 3 cut(s) 196, 703, 1085
TaiI ACGT 3 cut(s) 32, 493, 999
TaqI TCGA 2 cut(s) 378, 447
TasI AATT 7 cut(s) 22, 150, 268, 531, 627, 671, 1078
TatI WGTACW 3 cut(s) 498, 743, 845
TauI GCSGC 2 cut(s) 92, 424
TfiI GAWTC 5 cut(s) 56, 139, 380, 811, 958
Tru1I TTAA 3 cut(s) 456, 828, 1034
Tru9I TTAA 3 cut(s) 456, 828, 1034
TscAI CASTG 3 cut(s) 99, 649, 883
TseFI GTSAC 2 cut(s) 901, 985
TseI GCWGC 2 cut(s) 129, 356
Tsp45I GTSAC 2 cut(s) 901, 985
TspDTI ATGAA 2 cut(s) 351, 867
TspRI CASTG 3 cut(s) 99, 649, 883
XagI CCTNNNNNAGG 2 cut(s) 161, 238
XapI RAATTY 1 cut(s) 627
XmiI GTMKAC 2 cut(s) 32, 191
XspI CTAG 1 cut(s) 819
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.