pycom11g27080

Monoglyceride

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0006691
Physical Location & Seq
Forward (+)
29462467 .. 29466658
4192 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1011 bp
ATGGAGGTAGAATATCAAGAAATGGTTGCCCTTTTCCTCTCCAAAGGCACTTGTGTTCCTTTGCCATGGGTATGGCATGGAGTGCAGCGGTTTCATGAGAGCATTTACATAGAATGTGGAATCCGCCTAGCTAACGGGGGATATGCCGTGTTCGGAATTGACTACGAGGGCCACGGACGTTCGAGAGGGGCCAGATGTTACATCAAGAAGTTCAAAAACATAGTCAACGATTGCGATGAATTCTTCAAGTCGATTTGTGCTGAGGAAGAGTACCAAGACAAGTGTAAGTTTTTGTATGGAGAATCCATGGGAGGGGCAGTTTCTCTACTGCTTCACAAGAAAGATCCCACGTTTTGGAATGGAGCTGTTCTTGTTGCACCCATGTGTAAGATATCAGAAAAGGTCAAGCCACACCCGCTGGTGATCAATGTATTAACCAGAGTGGAGGAGATTATTCCCAAATGGAAGATAGTACCCACCAAAGACGTCATTGACTCCGCCTTCAAAGACCCTGTAAAGCGCGAAGAGATAAGGAGCAACAAACTGATATATCAAGACAAGCCGAGGCTGAAAACAGCACTGGAAATGCTGAGAACTAGCATGAGCCTTGAAGACACTTTGCATGAGGTGAGACTTCCATTCTTTGTGTTGCATGGGGAGGCAGATACAGTTACAGACCCAGAAGTAAGCAGAGCACTGTATGAGAAAGCCAGCAGCACAGACAAAACCATAAAATTGTACCCCGGAATGTGGCATGGTCTAACGTCGGGAGAGCCAGATGGGAACGTTGAAATCGTCTTTGCAGACATCATAACTTGGCTCGAGAAGCACACGAGTGATGACAACTCCATCGTGGTGCAACCAATCCACACGTTTAAGAATGCCATTCTGACAATGAACGGCACGGCATCACCACCACCCCCGACACCAATAAACAAGCAGCGACCGTGGACACCATCGTATTTTTGCGGGTTGAAGGGGCGCAGATTGCTACATCACTCGGCAATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00561 ko01100 ko04714 ko04723 ko04923 ko05225 map00561 map01100 map04714 map04723 map04923 map05225
Pfam Domains
Protein Families
Hydrolase_4

Protein Analysis

337

Amino Acids

38.18

Weight (kDa)

7.18

Isoelectric Point (pI)

33.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Abhydrolase_6 PF12697 22 - 253 1.2e-06 Alpha/beta hydrolase family
Hydrolase_4 PF12146 32 - 259 1.2e-59 Serine aminopeptidase, S33
Abhydrolase_1 PF00561 43 - 136 4.4e-06 alpha/beta hydrolase fold
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 489
AccB7I CCANNNNNTGG 1 cut(s) 354
AccII CGCG 1 cut(s) 522
AciI CCGC 5 cut(s) 88, 124, 416, 498, 969
AclI AACGTT 1 cut(s) 786
AclWI GGATC 1 cut(s) 338
AcsI RAATTY 1 cut(s) 239
AcyI GRCGYC 1 cut(s) 486
AfaI GTAC 3 cut(s) 272, 474, 740
AfiI CCNNNNNNNGG 3 cut(s) 312, 354, 750
AflIII ACRYGT 1 cut(s) 870
AgsI TTSAA 6 cut(s) 214, 247, 505, 611, 791, 976
AleI CACNNNNGTG 2 cut(s) 382, 834
AluBI AGCT 2 cut(s) 131, 365
AluI AGCT 2 cut(s) 131, 365
Alw21I GWGCWC 1 cut(s) 697
Alw26I GTCTC 1 cut(s) 625
AlwI GGATC 1 cut(s) 338
Ama87I CYCGRG 1 cut(s) 821
AoxI GGCC 2 cut(s) 169, 189
ApeKI GCWGC 3 cut(s) 85, 714, 940
ApoI RAATTY 1 cut(s) 239
ArsI GACNNNNNNTTYG 2 cut(s) 207, 239
AspLEI GCGC 2 cut(s) 522, 984
AspS9I GGNCC 2 cut(s) 169, 189
AsuC2I CCSGG 1 cut(s) 744
AsuHPI GGTGA 3 cut(s) 433, 640, 903
AvaI CYCGRG 1 cut(s) 821
BauI CACGAG 1 cut(s) 832
BbsI GAAGAC 1 cut(s) 618
Bbv12I GWGCWC 1 cut(s) 697
BbvCI CCTCAGC 1 cut(s) 261
BbvI GCAGC 3 cut(s) 97, 726, 952
BccI CCATC 3 cut(s) 773, 857, 964
BceAI ACGGC 3 cut(s) 131, 916, 921
BclI TGATCA 1 cut(s) 423
BcnI CCSGG 1 cut(s) 744
BcoDI GTCTC 1 cut(s) 625
BfaI CTAG 2 cut(s) 128, 597
BisI GCNGC 3 cut(s) 86, 715, 941
BlsI GCNGC 3 cut(s) 87, 716, 942
Bme1390I CCNGG 1 cut(s) 744
BmeT110I CYCGRG 1 cut(s) 821
BmgT120I GGNCC 2 cut(s) 169, 189
BmiI GGNNCC 1 cut(s) 190
BmrFI CCNGG 1 cut(s) 744
BmsI GCATC 1 cut(s) 917
BpiI GAAGAC 1 cut(s) 618
Bpu10I CCTNAGC 1 cut(s) 261
BpuMI CCSGG 1 cut(s) 744
BsaHI GRCGYC 1 cut(s) 486
BsaJI CCNNGG 6 cut(s) 65, 172, 306, 563, 742, 947
BsaXI ACNNNNNCTCC 2 cut(s) 303, 333
Bsc4I CCNNNNNNNGG 3 cut(s) 312, 354, 750
Bse1I ACTGG 1 cut(s) 585
Bse3DI GCAATG 1 cut(s) 1011
BseDI CCNNGG 6 cut(s) 65, 172, 306, 563, 742, 947
BseLI CCNNNNNNNGG 3 cut(s) 312, 354, 750
BseMI GCAATG 1 cut(s) 1011
BseMII CTCAG 2 cut(s) 252, 581
BseNI ACTGG 1 cut(s) 585
BseRI GAGGAG 1 cut(s) 461
BseXI GCAGC 3 cut(s) 97, 726, 952
BsgI GTGCAG 1 cut(s) 104
Bsh1236I CGCG 1 cut(s) 522
Bsh1285I CGRYCG 1 cut(s) 947
BshFI GGCC 2 cut(s) 171, 191
BsiEI CGRYCG 1 cut(s) 947
BsiHKAI GWGCWC 1 cut(s) 697
BsiHKCI CYCGRG 1 cut(s) 821
BsiSI CCGG 1 cut(s) 744
BslI CCNNNNNNNGG 3 cut(s) 312, 354, 750
BsmAI GTCTC 1 cut(s) 625
BsmI GAATGC 1 cut(s) 886
BsnI GGCC 2 cut(s) 171, 191
BsoBI CYCGRG 1 cut(s) 821
Bsp1286I GDGCHC 1 cut(s) 697
Bsp143I GATC 2 cut(s) 343, 423
Bsp19I CCATGG 2 cut(s) 65, 306
BspACI CCGC 5 cut(s) 88, 124, 416, 498, 969
BspANI GGCC 2 cut(s) 171, 191
BspCNI CTCAG 2 cut(s) 253, 582
BspFNI CGCG 1 cut(s) 522
BspHI TCATGA 1 cut(s) 94
BspLI GGNNCC 1 cut(s) 190
BspPI GGATC 1 cut(s) 338
BsrDI GCAATG 1 cut(s) 1011
BsrI ACTGG 1 cut(s) 585
BssECI CCNNGG 6 cut(s) 65, 172, 306, 563, 742, 947
BssMI GATC 2 cut(s) 343, 423
BssNI GRCGYC 1 cut(s) 486
BssSI CACGAG 1 cut(s) 832
BssT1I CCWWGG 2 cut(s) 65, 306
Bst2BI CACGAG 1 cut(s) 832
Bst4CI ACNGT 3 cut(s) 670, 699, 948
Bst6I CTCTTC 2 cut(s) 261, 519
BstACI GRCGYC 1 cut(s) 486
BstAPI GCANNNNNTGC 1 cut(s) 82
BstC8I GCNNGC 1 cut(s) 712
BstDEI CTNAG 2 cut(s) 261, 590
BstDSI CCRYGG 4 cut(s) 65, 172, 306, 947
BstFNI CGCG 1 cut(s) 522
BstHHI GCGC 2 cut(s) 522, 984
BstKTI GATC 2 cut(s) 346, 426
BstMAI GTCTC 1 cut(s) 625
BstMBI GATC 2 cut(s) 343, 423
BstMCI CGRYCG 1 cut(s) 947
BstMWI GCNNNNNNNGC 4 cut(s) 82, 415, 826, 988
BstSCI CCNGG 1 cut(s) 742
BstUI CGCG 1 cut(s) 522
BstV1I GCAGC 3 cut(s) 97, 726, 952
BstV2I GAAGAC 1 cut(s) 618
BstX2I RGATCY 1 cut(s) 343
BstXI CCANNNNNNTGG 1 cut(s) 72
BstYI RGATCY 1 cut(s) 343
BsuRI GGCC 2 cut(s) 171, 191
BtgI CCRYGG 4 cut(s) 65, 172, 306, 947
BtgZI GCGATG 1 cut(s) 249
BtsIMutI CAGTG 2 cut(s) 578, 695
Cac8I GCNNGC 1 cut(s) 712
CciI TCATGA 1 cut(s) 94
CfoI GCGC 2 cut(s) 522, 984
Cfr13I GGNCC 2 cut(s) 169, 189
Csp6I GTAC 3 cut(s) 271, 473, 739
CviAII CATG 9 cut(s) 66, 77, 95, 307, 382, 601, 623, 653, 755
CviQI GTAC 3 cut(s) 271, 473, 739
DdeI CTNAG 2 cut(s) 261, 590
DpnI GATC 2 cut(s) 345, 425
DpnII GATC 2 cut(s) 343, 423
Eam1104I CTCTTC 2 cut(s) 261, 519
EarI CTCTTC 2 cut(s) 261, 519
EciI GGCGGA 2 cut(s) 113, 487
Eco130I CCWWGG 2 cut(s) 65, 306
Eco32I GATATC 1 cut(s) 393
Eco88I CYCGRG 1 cut(s) 821
EcoRI GAATTC 1 cut(s) 239
EcoRV GATATC 1 cut(s) 393
EcoT14I CCWWGG 2 cut(s) 65, 306
ErhI CCWWGG 2 cut(s) 65, 306
FaeI CATG 9 cut(s) 69, 80, 98, 310, 385, 604, 626, 656, 758
FatI CATG 9 cut(s) 65, 76, 94, 306, 381, 600, 622, 652, 754
FauI CCCGC 2 cut(s) 423, 962
FbaI TGATCA 1 cut(s) 423
Fnu4HI GCNGC 3 cut(s) 86, 715, 941
Fsp4HI GCNGC 3 cut(s) 86, 715, 941
FspBI CTAG 2 cut(s) 128, 597
GlaI GCGC 2 cut(s) 521, 983
GluI GCNGC 3 cut(s) 86, 715, 941
HaeIII GGCC 2 cut(s) 171, 191
HapII CCGG 1 cut(s) 744
HhaI GCGC 2 cut(s) 522, 984
Hin1I GRCGYC 1 cut(s) 486
Hin1II CATG 9 cut(s) 69, 80, 98, 310, 385, 604, 626, 656, 758
Hin6I GCGC 2 cut(s) 520, 982
HinP1I GCGC 2 cut(s) 520, 982
HincII GTYRAC 1 cut(s) 226
HindII GTYRAC 1 cut(s) 226
HinfI GANTC 3 cut(s) 120, 302, 494
HpaII CCGG 1 cut(s) 744
HphI GGTGA 3 cut(s) 433, 640, 903
Hpy166II GTNNAC 2 cut(s) 226, 951
Hpy188I TCNGA 3 cut(s) 155, 397, 891
Hpy188III TCNNGA 7 cut(s) 17, 95, 183, 205, 554, 768, 823
Hpy8I GTNNAC 2 cut(s) 226, 951
Hpy99I CGWCG 1 cut(s) 769
HpyAV CCTTC 2 cut(s) 511, 970
HpyCH4III ACNGT 3 cut(s) 670, 699, 948
HpyCH4IV ACGT 6 cut(s) 178, 350, 486, 764, 786, 872
HpyCH4V TGCA 6 cut(s) 85, 377, 622, 652, 803, 859
HpyF10VI GCNNNNNNNGC 4 cut(s) 82, 415, 826, 988
HpyF3I CTNAG 2 cut(s) 261, 590
HpySE526I ACGT 6 cut(s) 178, 350, 486, 764, 786, 872
Hsp92I GRCGYC 1 cut(s) 486
Hsp92II CATG 9 cut(s) 69, 80, 98, 310, 385, 604, 626, 656, 758
HspAI GCGC 2 cut(s) 520, 982
Ksp22I TGATCA 1 cut(s) 423
Kzo9I GATC 2 cut(s) 343, 423
LmnI GCTCC 2 cut(s) 362, 534
LpnPI CCDG 9 cut(s) 205, 404, 451, 525, 566, 693, 724, 757, 789
Lsp1109I GCAGC 3 cut(s) 97, 726, 952
LweI GCATC 1 cut(s) 917
MaeI CTAG 2 cut(s) 128, 597
MaeII ACGT 6 cut(s) 178, 350, 486, 764, 786, 872
MaeIII GTNAC 2 cut(s) 197, 670
MalI GATC 2 cut(s) 345, 425
MboI GATC 2 cut(s) 343, 423
MboII GAAGA 5 cut(s) 235, 278, 478, 536, 623
MflI RGATCY 1 cut(s) 343
MhlI GDGCHC 1 cut(s) 697
MluCI AATT 3 cut(s) 156, 239, 734
MlyI GAGTC 1 cut(s) 488
MnlI CCTC 9 cut(s) 47, 160, 179, 256, 305, 439, 558, 619, 652
MseI TTAA 2 cut(s) 434, 876
MslI CAYNNNNRTG 4 cut(s) 70, 382, 834, 854
MspA1I CMGCKG 2 cut(s) 88, 418
MspI CCGG 1 cut(s) 744
MspR9I CCNGG 1 cut(s) 744
Mva1269I GAATGC 1 cut(s) 886
MvnI CGCG 1 cut(s) 522
MwoI GCNNNNNNNGC 4 cut(s) 82, 415, 826, 988
NciI CCSGG 1 cut(s) 744
NcoI CCATGG 2 cut(s) 65, 306
NdeII GATC 2 cut(s) 343, 423
NlaIII CATG 9 cut(s) 69, 80, 98, 310, 385, 604, 626, 656, 758
NlaIV GGNNCC 1 cut(s) 190
NmeAIII GCCGAG 2 cut(s) 588, 980
OliI CACNNNNGTG 2 cut(s) 382, 834
PaeR7I CTCGAG 1 cut(s) 821
PagI TCATGA 1 cut(s) 94
PcsI WCGNNNNNNNCGW 1 cut(s) 792
PctI GAATGC 1 cut(s) 886
PfeI GAWTC 2 cut(s) 120, 302
PflMI CCANNNNNTGG 1 cut(s) 354
PkrI GCNGC 3 cut(s) 87, 716, 942
PleI GAGTC 1 cut(s) 488
PpsI GAGTC 1 cut(s) 488
Psp1406I AACGTT 1 cut(s) 786
PspN4I GGNNCC 1 cut(s) 190
PspPI GGNCC 2 cut(s) 169, 189
PsuI RGATCY 1 cut(s) 343
RsaI GTAC 3 cut(s) 272, 474, 740
RsaNI GTAC 3 cut(s) 271, 473, 739
RseI CAYNNNNRTG 4 cut(s) 70, 382, 834, 854
SaqAI TTAA 2 cut(s) 434, 876
SatI GCNGC 3 cut(s) 86, 715, 941
Sau3AI GATC 2 cut(s) 343, 423
Sau96I GGNCC 2 cut(s) 169, 189
SchI GAGTC 1 cut(s) 488
ScrFI CCNGG 1 cut(s) 744
SduI GDGCHC 1 cut(s) 697
SfaNI GCATC 1 cut(s) 917
Sfr274I CTCGAG 1 cut(s) 821
SlaI CTCGAG 1 cut(s) 821
SmiMI CAYNNNNRTG 4 cut(s) 70, 382, 834, 854
SmlI CTYRAG 1 cut(s) 821
SmoI CTYRAG 1 cut(s) 821
Sse9I AATT 3 cut(s) 156, 239, 734
SsiI CCGC 5 cut(s) 88, 124, 416, 498, 969
SspMI CTAG 2 cut(s) 128, 597
StyD4I CCNGG 1 cut(s) 742
StyI CCWWGG 2 cut(s) 65, 306
TaaI ACNGT 3 cut(s) 670, 699, 948
TaiI ACGT 6 cut(s) 181, 353, 489, 767, 789, 875
TaqI TCGA 3 cut(s) 182, 251, 822
TasI AATT 3 cut(s) 156, 239, 734
TfiI GAWTC 2 cut(s) 120, 302
Tru1I TTAA 2 cut(s) 434, 876
Tru9I TTAA 2 cut(s) 434, 876
TscAI CASTG 2 cut(s) 585, 702
TseI GCWGC 3 cut(s) 85, 714, 940
TspDTI ATGAA 3 cut(s) 83, 252, 911
TspGWI ACGGA 1 cut(s) 189
TspRI CASTG 2 cut(s) 585, 702
Van91I CCANNNNNTGG 1 cut(s) 354
XapI RAATTY 1 cut(s) 239
XhoI CTCGAG 1 cut(s) 821
XspI CTAG 2 cut(s) 128, 597
ZraI GACGTC 1 cut(s) 487
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.