pycom12426g00070

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
tig00012426
Physical Location & Seq
Forward (+)
31419 .. 31637
219 bp
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UTR
Exon/CDS
Intron
pycom12426g00070.1

Sequence Viewer

Length: 219 bp
ATGGTACGGGGTTGCCACTTTGTGGTTGATGTTGTACTTCTTCATCAAGGATTCAAAAGGTTTGTTGCAGAAATGGCTGCCACCATCACTAATAATAGCTCTTGGGGTTCCAAACCTACAAAAAATCACATCTTTAAGAAAATTCAACACAACCTTATGATCATTAGTTCTTGTAGCAATGGCTTCAACCCATTTGGATACGTAATCCACTGCCACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

73

Amino Acids

8.15

Weight (kDa)

9.57

Isoelectric Point (pI)

30.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 22
AcsI RAATTY 1 cut(s) 141
AdeI CACNNNGTG 1 cut(s) 22
AfaI GTAC 2 cut(s) 6, 36
AfiI CCNNNNNNNGG 1 cut(s) 22
AgsI TTSAA 3 cut(s) 55, 146, 187
AluBI AGCT 1 cut(s) 99
AluI AGCT 1 cut(s) 99
ApeKI GCWGC 1 cut(s) 77
ApoI RAATTY 1 cut(s) 141
BbvI GCAGC 1 cut(s) 64
BccI CCATC 1 cut(s) 92
BciVI GTATCC 1 cut(s) 191
BclI TGATCA 1 cut(s) 159
BfuI GTATCC 1 cut(s) 191
BisI GCNGC 1 cut(s) 78
BlsI GCNGC 1 cut(s) 79
BmiI GGNNCC 1 cut(s) 109
BsaAI YACGTR 1 cut(s) 202
Bsc4I CCNNNNNNNGG 1 cut(s) 22
Bse3DI GCAATG 1 cut(s) 184
BseLI CCNNNNNNNGG 1 cut(s) 22
BseMI GCAATG 1 cut(s) 184
BseXI GCAGC 1 cut(s) 64
BslI CCNNNNNNNGG 1 cut(s) 22
Bsp143I GATC 1 cut(s) 159
BspLI GGNNCC 1 cut(s) 109
BsrDI GCAATG 1 cut(s) 184
BssMI GATC 1 cut(s) 159
BstBAI YACGTR 1 cut(s) 202
BstKTI GATC 1 cut(s) 162
BstMBI GATC 1 cut(s) 159
BstMWI GCNNNNNNNGC 1 cut(s) 74
BstSNI TACGTA 1 cut(s) 202
BstV1I GCAGC 1 cut(s) 64
BsuI GTATCC 1 cut(s) 191
BtsI GCAGTG 1 cut(s) 208
BtsIMutI CAGTG 1 cut(s) 208
Csp6I GTAC 2 cut(s) 5, 35
CviJI RGCY 3 cut(s) 77, 99, 183
CviKI_1 RGCY 3 cut(s) 77, 99, 183
CviQI GTAC 2 cut(s) 5, 35
DpnI GATC 1 cut(s) 161
DpnII GATC 1 cut(s) 159
DraIII CACNNNGTG 1 cut(s) 22
Eco105I TACGTA 1 cut(s) 202
FaiI YATR 1 cut(s) 158
FbaI TGATCA 1 cut(s) 159
Fnu4HI GCNGC 1 cut(s) 78
Fsp4HI GCNGC 1 cut(s) 78
GluI GCNGC 1 cut(s) 78
HinfI GANTC 1 cut(s) 51
HpyCH4IV ACGT 1 cut(s) 201
HpyCH4V TGCA 1 cut(s) 68
HpyF10VI GCNNNNNNNGC 1 cut(s) 74
HpySE526I ACGT 1 cut(s) 201
Ksp22I TGATCA 1 cut(s) 159
Kzo9I GATC 1 cut(s) 159
Lsp1109I GCAGC 1 cut(s) 64
MaeII ACGT 1 cut(s) 201
MalI GATC 1 cut(s) 161
MboI GATC 1 cut(s) 159
MboII GAAGA 1 cut(s) 32
MluCI AATT 1 cut(s) 141
MseI TTAA 1 cut(s) 135
MwoI GCNNNNNNNGC 1 cut(s) 74
NdeII GATC 1 cut(s) 159
NlaIV GGNNCC 1 cut(s) 109
PfeI GAWTC 1 cut(s) 51
PflMI CCANNNNNTGG 1 cut(s) 22
PkrI GCNGC 1 cut(s) 79
Ppu21I YACGTR 1 cut(s) 202
PspN4I GGNNCC 1 cut(s) 109
RsaI GTAC 2 cut(s) 6, 36
RsaNI GTAC 2 cut(s) 5, 35
SaqAI TTAA 1 cut(s) 135
SatI GCNGC 1 cut(s) 78
Sau3AI GATC 1 cut(s) 159
SetI ASST 5 cut(s) 62, 101, 118, 156, 204
SgeI CNNG 4 cut(s) 20, 59, 114, 183
SnaBI TACGTA 1 cut(s) 202
Sse9I AATT 1 cut(s) 141
TaiI ACGT 1 cut(s) 204
TasI AATT 1 cut(s) 141
TatI WGTACW 1 cut(s) 34
TfiI GAWTC 1 cut(s) 51
Tru1I TTAA 1 cut(s) 135
Tru9I TTAA 1 cut(s) 135
TscAI CASTG 1 cut(s) 215
TseI GCWGC 1 cut(s) 77
TspDTI ATGAA 1 cut(s) 32
TspRI CASTG 1 cut(s) 215
Van91I CCANNNNNTGG 1 cut(s) 22
XapI RAATTY 1 cut(s) 141
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.