pycom12g07890

Cystathionine beta-lyase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
Physical Location & Seq
Forward (+)
8601609 .. 8607721
6113 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom12g07890.2

Sequence Viewer

Length: 1419 bp
ATGGCTGCTTCTTCTTCTCTCTCTTTTAGGTCTTTCTTCAGCTCCGTCGCCGCCGATTCCAATGACGCCGGTTTAACGCCTGGGAATTTCGGACCAAGCTTTGTCGATTCCCGGGTCAGTTTTGGGTTCACAAAGGCAACCAAATCAAGGGGAAAGACGTTGTCCTGTGAGAATAAATTTCAATTCAAGTGTTCGGTGGACAGAGATATGGATCTGAGCACTTCAGCAATATCTGATGGTGTTGCAGACTGCGTAAATGAAGTTGAGCCGAAAGAGCCAAGTATCTCAACTATGCTGATGAACTTTGAGAACAAGTTTGATCCGTTTGATGCAATGAATACGCCACTTTACCAAACAGCTACGTTTAAGCAGCCTTCAGCAACAGAAAATGGTGCTTATGATTATACTAGAAGTGGAAATCCCACACGGGATGCCTTGGAAAGCCTTTTGGCAAAGCTTGATAAAGCAGATCGAGCATTTTGTTTCACTAGTGGAATGGCTGCTTTGGCGGCTGTTGCTCATCTTTTAGGAACAGGTGAGGAGATTGTTGCAGGAGACGACATTTATGGAGGTTCTGATCGGTTGCTATCACAAGTAGTTCCAAAGACTGGAGTTGTGGTGAAACGAGTGAACACAAGTGATTTAGATGAGGTTGCATCTGCTATTGGCCCCTGGACAAAGCTTGTGTGGCTGGAGAGTCCCACCAATCCTCGACAAATGATTTCTGATATTCGTAAAATAGCAGAGATGGCTCATGCACATGGTGCTATTGTGTTAGTGGATAACAGTATAATGTCTCCTGTATTGTCACAGCCACTGGATCTCGGAGCAGACATTGTTATGCACTCGGCCACAAAGTTTATTGCTGGACACAGTGATGTCATGGCAGGTGTTTTAGCTGTTAAAGGCGATAGCTTGGCGAAACAGCTATATTTCCTACAAAATGCAGAAGGCTCTGGATTAGCTCCATTTGACTGTTGGGTCTGTTTACGAGGAATTAAGACAATGGCCTTGCGTGTTGAGAAGCAACAGGATAATGCTCAAAAAATTGCTGAGTTCCTCGCTTCCCATCCACGAGTGACACAAGTTAATTACGCTGGGCTTTCTGGTCACCCTGGACGTGCCTTGCATTATTCTCAGGCAAGGGGTGCAGGATCTGTATTGAGTTTTCTGACAGGTTCATTGTCACTATCAAAGCATATTGTCGAGACTACCAAATACTTCAGTATAACTGTCAGTTTTGGGAGTGTGAAGTCCCTTATAAGCCTGCCGTGCTTCATGTCTCATGCAAGCATACCATCTGCAGTGCGTGAGGCCAGAGGCCTATCTGAAGATCTTGTTCGTATTTCTGTGGGGATCGAGGATGTGAATGATCTGATTGCTGATTTGGACCATGCACTTAAAACTGGCCCTCTGTAG

Protein Analysis

473

Amino Acids

50.49

Weight (kDa)

5.79

Isoelectric Point (pI)

30.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1262
AarI CACCTGC 1 cut(s) 878
AasI GACNNNNNNGTC 1 cut(s) 980
Acc36I ACCTGC 1 cut(s) 878
AccB7I CCANNNNNTGG 1 cut(s) 608
AciI CCGC 2 cut(s) 51, 509
AclWI GGATC 5 cut(s) 219, 314, 828, 1162, 1364
AcoI YGGCCR 1 cut(s) 849
AcsI RAATTY 2 cut(s) 85, 176
AcuI CTGAAG 5 cut(s) 22, 207, 360, 1207, 1350
AcyI GRCGYC 1 cut(s) 66
AdeI CACNNNGTG 1 cut(s) 764
AfiI CCNNNNNNNGG 2 cut(s) 147, 608
AgsI TTSAA 2 cut(s) 182, 187
AhlI ACTAGT 1 cut(s) 488
AjiI CACGTC 1 cut(s) 1121
AjnI CCWGG 3 cut(s) 79, 671, 1114
AluBI AGCT 9 cut(s) 42, 99, 359, 457, 682, 899, 915, 928, 965
AluI AGCT 9 cut(s) 42, 99, 359, 457, 682, 899, 915, 928, 965
Alw21I GWGCWC 1 cut(s) 221
Alw26I GTCTC 4 cut(s) 549, 801, 1202, 1287
AlwI GGATC 5 cut(s) 219, 314, 828, 1162, 1364
AlwNI CAGNNNCTG 2 cut(s) 817, 1157
Ama87I CYCGRG 1 cut(s) 111
AoxI GGCC 6 cut(s) 667, 849, 1008, 1314, 1321, 1408
ApeKI GCWGC 3 cut(s) 5, 370, 500
ApoI RAATTY 2 cut(s) 85, 176
AspS9I GGNCC 4 cut(s) 92, 668, 1390, 1409
AsuC2I CCSGG 2 cut(s) 112, 113
AsuHPI GGTGA 3 cut(s) 548, 631, 1103
AvaI CYCGRG 1 cut(s) 111
AvaII GGWCC 2 cut(s) 92, 1390
BauI CACGAG 1 cut(s) 1074
Bbv12I GWGCWC 1 cut(s) 221
BbvI GCAGC 2 cut(s) 382, 487
BccI CCATC 4 cut(s) 230, 742, 1077, 1306
BceAI ACGGC 1 cut(s) 1255
BciT130I CCWGG 3 cut(s) 81, 673, 1116
BcnI CCSGG 2 cut(s) 112, 113
BcoDI GTCTC 4 cut(s) 549, 801, 1202, 1287
BcuI ACTAGT 1 cut(s) 488
BfaI CTAG 2 cut(s) 408, 489
BfmI CTRYAG 2 cut(s) 1302, 1415
BfuAI ACCTGC 1 cut(s) 878
BglII AGATCT 1 cut(s) 1333
BisI GCNGC 5 cut(s) 6, 51, 371, 501, 510
BlsI GCNGC 5 cut(s) 7, 52, 372, 502, 511
Bme1390I CCNGG 5 cut(s) 81, 112, 113, 673, 1116
Bme18I GGWCC 2 cut(s) 92, 1390
BmeT110I CYCGRG 1 cut(s) 111
BmgBI CACGTC 1 cut(s) 1121
BmgT120I GGNCC 4 cut(s) 92, 668, 1390, 1409
BmiI GGNNCC 1 cut(s) 670
BmrFI CCNGG 5 cut(s) 81, 112, 113, 673, 1116
BmsI GCATC 3 cut(s) 319, 421, 665
BpmI CTGGAG 2 cut(s) 630, 713
BpuMI CCSGG 2 cut(s) 112, 113
BsaBI GATNNNNATC 1 cut(s) 210
BsaHI GRCGYC 1 cut(s) 66
BsaJI CCNNGG 5 cut(s) 80, 111, 435, 671, 1114
BsaXI ACNNNNNCTCC 2 cut(s) 603, 633
Bsc4I CCNNNNNNNGG 2 cut(s) 147, 608
Bse118I RCCGGY 1 cut(s) 68
Bse1I ACTGG 3 cut(s) 613, 822, 1411
Bse3DI GCAATG 1 cut(s) 339
Bse8I GATNNNNATC 1 cut(s) 210
BseBI CCWGG 3 cut(s) 81, 673, 1116
BseDI CCNNGG 5 cut(s) 80, 111, 435, 671, 1114
BseGI GGATG 3 cut(s) 436, 1069, 1369
BseJI GATNNNNATC 1 cut(s) 210
BseLI CCNNNNNNNGG 2 cut(s) 147, 608
BseMI GCAATG 1 cut(s) 339
BseMII CTCAG 3 cut(s) 206, 1044, 1151
BseNI ACTGG 3 cut(s) 613, 822, 1411
BseRI GAGGAG 1 cut(s) 554
BseXI GCAGC 2 cut(s) 382, 487
BseYI CCCAGC 1 cut(s) 1097
BsgI GTGCAG 1 cut(s) 1170
BshFI GGCC 6 cut(s) 669, 851, 1010, 1316, 1323, 1410
BsiHKAI GWGCWC 1 cut(s) 221
BsiHKCI CYCGRG 1 cut(s) 111
BsiSI CCGG 2 cut(s) 69, 112
BslFI GGGAC 2 cut(s) 684, 1240
BslI CCNNNNNNNGG 2 cut(s) 147, 608
BsmAI GTCTC 4 cut(s) 549, 801, 1202, 1287
BsmBI CGTCTC 1 cut(s) 549
BsmFI GGGAC 2 cut(s) 684, 1240
BsnI GGCC 6 cut(s) 669, 851, 1010, 1316, 1323, 1410
BsoBI CYCGRG 1 cut(s) 111
Bsp1286I GDGCHC 1 cut(s) 221
Bsp143I GATC 9 cut(s) 211, 319, 469, 577, 820, 1154, 1333, 1356, 1372
BspACI CCGC 2 cut(s) 51, 509
BspANI GGCC 6 cut(s) 669, 851, 1010, 1316, 1323, 1410
BspCNI CTCAG 3 cut(s) 207, 1045, 1150
BspLI GGNNCC 1 cut(s) 670
BspMAI CTGCAG 1 cut(s) 1306
BspMI ACCTGC 1 cut(s) 878
BspPI GGATC 5 cut(s) 219, 314, 828, 1162, 1364
BsrDI GCAATG 1 cut(s) 339
BsrFI RCCGGY 1 cut(s) 68
BsrI ACTGG 3 cut(s) 613, 822, 1411
BssAI RCCGGY 1 cut(s) 68
BssECI CCNNGG 5 cut(s) 80, 111, 435, 671, 1114
BssMI GATC 9 cut(s) 211, 319, 469, 577, 820, 1154, 1333, 1356, 1372
BssNI GRCGYC 1 cut(s) 66
BssSI CACGAG 1 cut(s) 1074
BssT1I CCWWGG 1 cut(s) 435
Bst2BI CACGAG 1 cut(s) 1074
Bst2UI CCWGG 3 cut(s) 81, 673, 1116
Bst4CI ACNGT 4 cut(s) 788, 875, 977, 1234
BstACI GRCGYC 1 cut(s) 66
BstAPI GCANNNNNTGC 2 cut(s) 764, 1148
BstC8I GCNNGC 2 cut(s) 1268, 1291
BstDEI CTNAG 3 cut(s) 215, 1053, 1137
BstEII GGTNACC 1 cut(s) 1109
BstF5I GGATG 3 cut(s) 436, 1069, 1369
BstKTI GATC 9 cut(s) 214, 322, 472, 580, 823, 1157, 1336, 1359, 1375
BstMAI GTCTC 4 cut(s) 549, 801, 1202, 1287
BstMBI GATC 9 cut(s) 211, 319, 469, 577, 820, 1154, 1333, 1356, 1372
BstNI CCWGG 3 cut(s) 81, 673, 1116
BstPI GGTNACC 1 cut(s) 1109
BstSCI CCNGG 5 cut(s) 79, 110, 111, 671, 1114
BstSFI CTRYAG 2 cut(s) 1302, 1415
BstV1I GCAGC 2 cut(s) 382, 487
BstX2I RGATCY 4 cut(s) 211, 820, 1154, 1333
BstYI RGATCY 4 cut(s) 211, 820, 1154, 1333
BsuRI GGCC 6 cut(s) 669, 851, 1010, 1316, 1323, 1410
BtrI CACGTC 1 cut(s) 1121
BtsCI GGATG 3 cut(s) 436, 1069, 1369
BtsI GCAGTG 1 cut(s) 1311
BtsIMutI CAGTG 3 cut(s) 815, 880, 1311
BveI ACCTGC 1 cut(s) 878
Cac8I GCNNGC 2 cut(s) 1268, 1291
CaiI CAGNNNCTG 2 cut(s) 817, 1157
Cfr10I RCCGGY 1 cut(s) 68
Cfr13I GGNCC 4 cut(s) 92, 668, 1390, 1409
Cfr9I CCCGGG 1 cut(s) 111
CseI GACGC 1 cut(s) 74
CviAII CATG 6 cut(s) 755, 761, 883, 1279, 1286, 1394
DdeI CTNAG 3 cut(s) 215, 1053, 1137
DpnI GATC 9 cut(s) 213, 321, 471, 579, 822, 1156, 1335, 1358, 1374
DpnII GATC 9 cut(s) 211, 319, 469, 577, 820, 1154, 1333, 1356, 1372
DraIII CACNNNGTG 1 cut(s) 764
DrdI GACNNNNNNGTC 1 cut(s) 980
DseDI GACNNNNNNGTC 1 cut(s) 980
EaeI YGGCCR 1 cut(s) 849
Eco130I CCWWGG 1 cut(s) 435
Eco147I AGGCCT 1 cut(s) 1323
Eco47I GGWCC 2 cut(s) 92, 1390
Eco57I CTGAAG 5 cut(s) 22, 207, 360, 1207, 1350
Eco88I CYCGRG 1 cut(s) 111
Eco91I GGTNACC 1 cut(s) 1109
EcoO65I GGTNACC 1 cut(s) 1109
EcoRII CCWGG 3 cut(s) 79, 671, 1114
EcoT14I CCWWGG 1 cut(s) 435
ErhI CCWWGG 1 cut(s) 435
Esp3I CGTCTC 1 cut(s) 549
FaeI CATG 6 cut(s) 758, 764, 886, 1282, 1289, 1397
FaqI GGGAC 2 cut(s) 684, 1240
FatI CATG 6 cut(s) 754, 760, 882, 1278, 1285, 1393
Fnu4HI GCNGC 5 cut(s) 6, 51, 371, 501, 510
FokI GGATG 3 cut(s) 443, 1056, 1376
Fsp4HI GCNGC 5 cut(s) 6, 51, 371, 501, 510
FspBI CTAG 2 cut(s) 408, 489
GluI GCNGC 5 cut(s) 6, 51, 371, 501, 510
GsaI CCCAGC 1 cut(s) 1101
GsuI CTGGAG 2 cut(s) 630, 713
HaeIII GGCC 6 cut(s) 669, 851, 1010, 1316, 1323, 1410
HapII CCGG 2 cut(s) 69, 112
HgaI GACGC 1 cut(s) 74
Hin1I GRCGYC 1 cut(s) 66
Hin1II CATG 6 cut(s) 758, 764, 886, 1282, 1289, 1397
HindIII AAGCTT 3 cut(s) 97, 455, 680
HinfI GANTC 3 cut(s) 56, 107, 697
HpaII CCGG 2 cut(s) 69, 112
HphI GGTGA 3 cut(s) 548, 631, 1103
Hpy166II GTNNAC 4 cut(s) 129, 199, 631, 989
Hpy188I TCNGA 9 cut(s) 92, 216, 235, 577, 727, 827, 1173, 1330, 1377
Hpy188III TCNNGA 2 cut(s) 957, 1207
Hpy8I GTNNAC 4 cut(s) 129, 199, 631, 989
Hpy99I CGWCG 1 cut(s) 50
HpyAV CCTTC 2 cut(s) 384, 944
HpyCH4III ACNGT 4 cut(s) 788, 875, 977, 1234
HpyCH4IV ACGT 3 cut(s) 158, 362, 1120
HpyF3I CTNAG 3 cut(s) 215, 1053, 1137
HpySE526I ACGT 3 cut(s) 158, 362, 1120
Hsp92I GRCGYC 1 cut(s) 66
Hsp92II CATG 6 cut(s) 758, 764, 886, 1282, 1289, 1397
Kzo9I GATC 9 cut(s) 211, 319, 469, 577, 820, 1154, 1333, 1356, 1372
LmnI GCTCC 3 cut(s) 47, 827, 970
Lsp1109I GCAGC 2 cut(s) 382, 487
LweI GCATC 3 cut(s) 319, 421, 665
MaeI CTAG 2 cut(s) 408, 489
MaeII ACGT 3 cut(s) 158, 362, 1120
MaeIII GTNAC 4 cut(s) 807, 1078, 1109, 1185
MalI GATC 9 cut(s) 213, 321, 471, 579, 822, 1156, 1335, 1358, 1374
MboI GATC 9 cut(s) 211, 319, 469, 577, 820, 1154, 1333, 1356, 1372
MboII GAAGA 4 cut(s) 3, 6, 28, 1343
MflI RGATCY 4 cut(s) 211, 820, 1154, 1333
MhlI GDGCHC 1 cut(s) 221
MluCI AATT 6 cut(s) 85, 176, 182, 996, 1047, 1090
MlyI GAGTC 1 cut(s) 706
MnlI CCTC 9 cut(s) 532, 563, 643, 720, 986, 1070, 1306, 1313, 1354
MseI TTAA 6 cut(s) 74, 366, 903, 999, 1089, 1401
MslI CAYNNNNRTG 3 cut(s) 759, 839, 876
MspI CCGG 2 cut(s) 69, 112
MspR9I CCNGG 5 cut(s) 81, 112, 113, 673, 1116
MvaI CCWGG 3 cut(s) 81, 673, 1116
NciI CCSGG 2 cut(s) 112, 113
NdeII GATC 9 cut(s) 211, 319, 469, 577, 820, 1154, 1333, 1356, 1372
NlaIII CATG 6 cut(s) 758, 764, 886, 1282, 1289, 1397
NlaIV GGNNCC 1 cut(s) 670
NmeAIII GCCGAG 1 cut(s) 827
NmuCI GTSAC 4 cut(s) 807, 1078, 1109, 1185
PaqCI CACCTGC 1 cut(s) 878
PceI AGGCCT 1 cut(s) 1323
PfeI GAWTC 2 cut(s) 56, 107
PflFI GACNNNGTC 1 cut(s) 160
PflMI CCANNNNNTGG 1 cut(s) 608
PkrI GCNGC 5 cut(s) 7, 52, 372, 502, 511
PleI GAGTC 1 cut(s) 705
PpsI GAGTC 1 cut(s) 705
PsiI TTATAA 1 cut(s) 1262
Psp6I CCWGG 3 cut(s) 79, 671, 1114
PspEI GGTNACC 1 cut(s) 1109
PspFI CCCAGC 1 cut(s) 1097
PspGI CCWGG 3 cut(s) 79, 671, 1114
PspN4I GGNNCC 1 cut(s) 670
PspPI GGNCC 4 cut(s) 92, 668, 1390, 1409
PstI CTGCAG 1 cut(s) 1306
PstNI CAGNNNCTG 2 cut(s) 817, 1157
PsuI RGATCY 4 cut(s) 211, 820, 1154, 1333
PsyI GACNNNGTC 1 cut(s) 160
RseI CAYNNNNRTG 3 cut(s) 759, 839, 876
SaqAI TTAA 6 cut(s) 74, 366, 903, 999, 1089, 1401
SatI GCNGC 5 cut(s) 6, 51, 371, 501, 510
Sau3AI GATC 9 cut(s) 211, 319, 469, 577, 820, 1154, 1333, 1356, 1372
Sau96I GGNCC 4 cut(s) 92, 668, 1390, 1409
SchI GAGTC 1 cut(s) 706
ScrFI CCNGG 5 cut(s) 81, 112, 113, 673, 1116
SduI GDGCHC 1 cut(s) 221
SfaNI GCATC 3 cut(s) 319, 421, 665
SfcI CTRYAG 2 cut(s) 1302, 1415
SinI GGWCC 2 cut(s) 92, 1390
SmaI CCCGGG 1 cut(s) 113
SmiMI CAYNNNNRTG 3 cut(s) 759, 839, 876
SpeI ACTAGT 1 cut(s) 488
Sse9I AATT 6 cut(s) 85, 176, 182, 996, 1047, 1090
SseBI AGGCCT 1 cut(s) 1323
SsiI CCGC 2 cut(s) 51, 509
SspMI CTAG 2 cut(s) 408, 489
StuI AGGCCT 1 cut(s) 1323
StyD4I CCNGG 5 cut(s) 79, 110, 111, 671, 1114
StyI CCWWGG 1 cut(s) 435
TaaI ACNGT 4 cut(s) 788, 875, 977, 1234
TaiI ACGT 3 cut(s) 161, 365, 1123
TaqI TCGA 5 cut(s) 105, 472, 712, 1206, 1359
TasI AATT 6 cut(s) 85, 176, 182, 996, 1047, 1090
TauI GCSGC 2 cut(s) 53, 512
TfiI GAWTC 2 cut(s) 56, 107
Tru1I TTAA 6 cut(s) 74, 366, 903, 999, 1089, 1401
Tru9I TTAA 6 cut(s) 74, 366, 903, 999, 1089, 1401
TscAI CASTG 3 cut(s) 822, 880, 1311
TseFI GTSAC 4 cut(s) 807, 1078, 1109, 1185
TseI GCWGC 3 cut(s) 5, 370, 500
Tsp45I GTSAC 4 cut(s) 807, 1078, 1109, 1185
TspDTI ATGAA 5 cut(s) 273, 314, 350, 1170, 1267
TspGWI ACGGA 2 cut(s) 34, 312
TspMI CCCGGG 1 cut(s) 111
TspRI CASTG 3 cut(s) 822, 880, 1311
Tth111I GACNNNGTC 1 cut(s) 160
Van91I CCANNNNNTGG 1 cut(s) 608
VpaK11BI GGWCC 2 cut(s) 92, 1390
XapI RAATTY 2 cut(s) 85, 176
XcmI CCANNNNNNNNNTGG 1 cut(s) 975
XmaI CCCGGG 1 cut(s) 111
XspI CTAG 2 cut(s) 408, 489
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.