Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0006334

Physical Location & Seq

Genomic Coordinates Forward (+)

26860661 .. 26864613

Gene Structure 3953 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0256500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2031 bp

ATGAACAAAGACTTATGGACGACACAGAGAATTTGGAGAGCTGCTTTAACAAAAGTGTCAAATTTCTCTGGCTGGAATTCAAAGGACTGGGGGTACGAATTAGAGCTCATCAAGAACATTGTTGCTGCAGTAAGGACGAAATCGCGCCCGACATTGTTTAGTTCGATGGAGAACTTGGTTGGGATAGATTCAAGAGTAGAAGCAGTTAATTTGCTTTTAGGTGTAGGGGTGAATGATGCTAACTTTATAGGGATATCGGGAATGGGTGGAATTGGTAAGACAACTATTGCCAAAGTACTTTTTGATCGAGTCTCTCATCAATTTGAGTTCAGCAGCTTTATGTCTAATGTTAGAAGCAATGAAGAAACAAGTGGTCTGGTTCAGTTACAAAAGAAACTTATTTCTAGGATGCTGGGGAAAGAGATTGACGTTCTTCTCGTTCTTGATGATGTTAATCATTCGGACCAGTTGGACAGTTTGGCTGGAAAGGAAGATTGGTTTGGTTCTGGAAGTATAGTTATCATCACAACTAGAGATGATCACTTATTTGAGGCCCAGGGACTAAATATTAATGAAGCTCTTCAGCTTTTTTGCCGGAAGGCCTTTAAAAAAGATTACCCTGAACGAAGCTACCAGCTGGATTTGTCTAATTATGTTGTGAATTATGCCAAAGGTCTTCCTCTGGCTCTTAAAGTCTTGGGTTCTTTTTTGCATGGAAGAGGTCGAAGTGCGTGGGAAAGTGCGTTGGCAAAATTGAGAAAAATGACAATGAGAAGAAAATCTTCCCAGACATTGCATGTTTCTACAGAGGGTACGAGAAAAAAAAAAGCAATAGAAAGACTTGACATGTGTGGCTTTTTTGCAACTATTGCAATTGATGTACTTGTGGAGAGATCTCTCTTAACTATTTCAGATGCTGGCACTCTACAAATGCATGATTTGCTCCAAGAAATGGGCCTAGAAATTGTTCGCCAAGAATCTCCAGACGAGCCAGGCAAGCGCAGCAGGTTGTGCCTTAAAGAAGACTTTATTCATGTCATGAGAAAAAATACGGGAACAGAAGCAGTGGAAGGCATAGTCCTGCGCGGGAATGATGTTGCAGACATATTGGATTTGCACTTGCATGCAAAATCCTTTTCGATGATGAAAAATTTGAGAATACTGATACTTTATGGTGTTTATATGCACCTCTCTGACGACTTTCTGTATCTTTCAAGTGAGTTACGGTTACTCGTATGGTGGAACCGTGGAAGCGTCCTCTACAATCATTGGCATCACTTATCAACCTGGAGAACTTACAAGAACTTGAAATGTGCCATAGCCAAATTGAATATCTGTGGGAGAGTAAACAGGACCACCGATATCTATGTTGCTGCCTTCCTTTGCTGGTTTGTAAGGTTGGATCTCTCGCACTGCAATCTTTTGGAAGGAGCCATCCCCAATGATCTCGGCTGCCTATCATCTTTAAGAGAATTATATCTAGAGAATAACCAATTTGTTAGCCATCCTGAGAGCCTCGGTCAACTTTACAGTCTTGAAGAGCTGCATTTGCAAGATTGCCATAACCTTCAAAAATTACCAAAGCTTCCATCTCGTGTAATTGTAAAAGCAAGTAATTGCATTTCATTGGAGATTGTGCCAGAACATCTGTCACTGGCATATTTTTTTAATTGTTTGAAACTGATGAAGCAAGGGTGTAGGAGTGTGGCATTCACATCAATGAAGCGACACCTTCAGACAACAGAGTTGAAACAAATTGAATTTTCATTTCAAGTCTGTGGCCAAGGCTTGTACGTTGTGAAGAAATGTTGGGTCCGTTTAGTATATGAACAAGATGTGGAAGAGTTTAACCAGAGCAACGTTAACATTTCTGATGAGGCTTTGGAAATTCCTCGTTGTGATTCTGGAAAAGCAGCAGTTGTATCACATTCCATTTCCAAGCGAGGCCTTCCTCAGTCTCATGGAGGAGGAGGACCTAGTGGAAGTGCCTTTCCTTTTTATAAGGAACCTCGCCCTCATTTTCTGAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000096 GO:0000097 GO:0003674 GO:0003824 GO:0003962 GO:0004121 GO:0004123 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006520 GO:0006534 GO:0006555 GO:0006790 GO:0006807 GO:0008144 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009066 GO:0009067 GO:0009069 GO:0009070 GO:0009086 GO:0009092 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0016053 GO:0016740 GO:0016765 GO:0016829 GO:0016846 GO:0017144 GO:0019279 GO:0019343 GO:0019344 GO:0019346 GO:0019752 GO:0019842 GO:0030170 GO:0036094 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044272 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0048037 GO:0050662 GO:0050667 GO:0070279 GO:0071265 GO:0071266 GO:0071704 GO:0097159 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607

KEGG Pathways

Metabolic & Signaling

ko00270 ko00450 ko01100 ko01110 ko01230 map00270 map00450 map01100 map01110 map01230

Pfam Domains

Protein Families

Cys_Met_Meta_PP

Protein Analysis

676

Amino Acids

76.57

Weight (kDa)

8.71

Isoelectric Point (pI)

43.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WHD_ROQ1	PF23282	277 - 327	4.2e-12	Disease resistance protein Roq1-like, winged-helix domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006334)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G57050 AT3G57050 AT3G57050 AT3G57050 AT3G57050
fragaria_vesca	FvH4_3g30150 FvH4_3g30150 FvH4_3g30150 FvH4_3g30150 FvH4_3g30150
malus_domestica	MD12G1093700.v1.1
prunus_persica	Prupe.7G042400_v2.0.a1 Prupe.7G042400_v2.0.a1 Prupe.7G042400_v2.0.a1
pyrus_communis	pycom12g07890
rosa_chinensis	RchiOBHm_Chr2g0125281
rosa_laevigata	RLG00000018853
rosa_multiflora	Rmu_sc0003505.1_g000036
rosa_roxburghii	Rroxscaffold_2G00118120 Rroxscaffold_2G00118630
rosa_rugosa	Rorug02G0256500 Rorug02G0256600
rosa_samantha	Rh2AG314800 Rh2BG322900 Rh2CG304900 Rh2DG341100
rosa_wichuraiana	Rw2G025440

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2001
Acc36I	ACCTGC	1 cut(s)	996
AccB7I	CCANNNNNTGG	1 cut(s)	952
AccII	CGCG	2 cut(s)	145, 1086
AciI	CCGC	1 cut(s)	1086
AclI	AACGTT	1 cut(s)	1860
AclWI	GGATC	1 cut(s)	1410
AcoI	YGGCCR	1 cut(s)	1780
AcsI	RAATTY	6 cut(s)	30, 61, 76, 1150, 1760, 1887
AcuI	CTGAAG	2 cut(s)	566, 1718
AfaI	GTAC	5 cut(s)	95, 297, 814, 882, 1793
AfiI	CCNNNNNNNGG	1 cut(s)	952
AflIII	ACRYGT	1 cut(s)	846
AjnI	CCWGG	3 cut(s)	555, 991, 1286
AjuI	GAANNNNNNNTTGG	4 cut(s)	478, 483, 510, 515
AluBI	AGCT	9 cut(s)	41, 106, 336, 578, 586, 630, 637, 1543, 1585
AluI	AGCT	9 cut(s)	41, 106, 336, 578, 586, 630, 637, 1543, 1585
Alw21I	GWGCWC	1 cut(s)	108
Alw26I	GTCTC	2 cut(s)	316, 1962
AlwI	GGATC	1 cut(s)	1410
AlwNI	CAGNNNCTG	1 cut(s)	917
AoxI	GGCC	5 cut(s)	552, 600, 955, 1780, 1945
ApeKI	GCWGC	8 cut(s)	41, 125, 333, 1002, 1373, 1452, 1543, 1913
ApoI	RAATTY	6 cut(s)	30, 61, 76, 1150, 1760, 1887
AseI	ATTAAT	1 cut(s)	570
Asp700I	GAANNNNTTC	3 cut(s)	579, 781, 966
AspLEI	GCGC	3 cut(s)	147, 1002, 1086
AspS9I	GGNCC	6 cut(s)	463, 553, 955, 1353, 1813, 1973
AsuHPI	GGTGA	1 cut(s)	241
AvaII	GGWCC	4 cut(s)	463, 1353, 1813, 1973
BalI	TGGCCA	1 cut(s)	1782
BanII	GRGCYC	1 cut(s)	108
BauI	CACGAG	1 cut(s)	1593
BbsI	GAAGAC	2 cut(s)	668, 1029
Bbv12I	GWGCWC	1 cut(s)	108
BbvI	GCAGC	8 cut(s)	28, 112, 345, 1014, 1360, 1439, 1530, 1925
BccI	CCATC	4 cut(s)	160, 1442, 1512, 1597
BciT130I	CCWGG	3 cut(s)	557, 993, 1288
BclI	TGATCA	1 cut(s)	538
BcoDI	GTCTC	2 cut(s)	316, 1962
BfaI	CTAG	5 cut(s)	405, 531, 959, 1481, 1977
BfmI	CTRYAG	2 cut(s)	126, 804
BfuAI	ACCTGC	1 cut(s)	996
BglII	AGATCT	1 cut(s)	893
BisI	GCNGC	8 cut(s)	42, 126, 334, 1003, 1374, 1453, 1544, 1914
BlsI	GCNGC	8 cut(s)	43, 127, 335, 1004, 1375, 1454, 1545, 1915
BmcAI	AGTACT	1 cut(s)	297
Bme1390I	CCNGG	3 cut(s)	557, 993, 1288
Bme18I	GGWCC	4 cut(s)	463, 1353, 1813, 1973
BmgT120I	GGNCC	6 cut(s)	463, 553, 955, 1353, 1813, 1973
BmiI	GGNNCC	4 cut(s)	1244, 1432, 1814, 2007
BmrFI	CCNGG	3 cut(s)	557, 993, 1288
BmrI	ACTGGG	1 cut(s)	97
BmsI	GCATC	4 cut(s)	226, 399, 904, 1282
BmuI	ACTGGG	1 cut(s)	97
BpiI	GAAGAC	2 cut(s)	668, 1029
BpmI	CTGGAG	2 cut(s)	966, 1309
BsaBI	GATNNNNATC	1 cut(s)	453
BsaJI	CCNNGG	5 cut(s)	555, 556, 1246, 1516, 1783
Bsc4I	CCNNNNNNNGG	1 cut(s)	952
Bse1I	ACTGG	3 cut(s)	92, 466, 1659
Bse3DI	GCAATG	2 cut(s)	364, 791
Bse8I	GATNNNNATC	1 cut(s)	453
BseBI	CCWGG	3 cut(s)	557, 993, 1288
BseDI	CCNNGG	5 cut(s)	555, 556, 1246, 1516, 1783
BseGI	GGATG	3 cut(s)	414, 1434, 1504
BseJI	GATNNNNATC	1 cut(s)	453
BseLI	CCNNNNNNNGG	1 cut(s)	952
BseMI	GCAATG	2 cut(s)	364, 791
BseMII	CTCAG	2 cut(s)	1500, 1967
BseNI	ACTGG	3 cut(s)	92, 466, 1659
BseRI	GAGGAG	2 cut(s)	1980, 1983
BseXI	GCAGC	8 cut(s)	28, 112, 345, 1014, 1360, 1439, 1530, 1925
BseYI	CCCAGC	1 cut(s)	412
Bsh1236I	CGCG	2 cut(s)	145, 1086
BshFI	GGCC	5 cut(s)	554, 602, 957, 1782, 1947
BsiHKAI	GWGCWC	1 cut(s)	108
BsiSI	CCGG	1 cut(s)	595
BslFI	GGGAC	1 cut(s)	573
BslI	CCNNNNNNNGG	1 cut(s)	952
BsmAI	GTCTC	2 cut(s)	316, 1962
BsmFI	GGGAC	1 cut(s)	573
BsmI	GAATGC	1 cut(s)	1709
BsnI	GGCC	5 cut(s)	554, 602, 957, 1782, 1947
Bsp1286I	GDGCHC	1 cut(s)	108
Bsp143I	GATC	5 cut(s)	304, 538, 893, 1402, 1444
BspACI	CCGC	1 cut(s)	1086
BspANI	GGCC	5 cut(s)	554, 602, 957, 1782, 1947
BspCNI	CTCAG	2 cut(s)	1501, 1966
BspFNI	CGCG	2 cut(s)	145, 1086
BspHI	TCATGA	1 cut(s)	1038
BspLI	GGNNCC	4 cut(s)	1244, 1432, 1814, 2007
BspMAI	CTGCAG	1 cut(s)	130
BspMI	ACCTGC	1 cut(s)	996
BspPI	GGATC	1 cut(s)	1410
BspQI	GCTCTTC	2 cut(s)	585, 1533
BsrDI	GCAATG	2 cut(s)	364, 791
BsrI	ACTGG	3 cut(s)	92, 466, 1659
BssECI	CCNNGG	5 cut(s)	555, 556, 1246, 1516, 1783
BssMI	GATC	5 cut(s)	304, 538, 893, 1402, 1444
BssSI	CACGAG	1 cut(s)	1593
BssT1I	CCWWGG	1 cut(s)	1783
Bst2BI	CACGAG	1 cut(s)	1593
Bst2UI	CCWGG	3 cut(s)	557, 993, 1288
Bst4CI	ACNGT	4 cut(s)	476, 1227, 1247, 1532
Bst6I	CTCTTC	4 cut(s)	585, 712, 1533, 1836
BstAPI	GCANNNNNTGC	3 cut(s)	869, 940, 1011
BstC8I	GCNNGC	3 cut(s)	919, 998, 1125
BstDEI	CTNAG	2 cut(s)	1509, 1953
BstDSI	CCRYGG	1 cut(s)	1246
BstF5I	GGATG	3 cut(s)	414, 1434, 1504
BstFNI	CGCG	2 cut(s)	145, 1086
BstHHI	GCGC	3 cut(s)	147, 1002, 1086
BstKTI	GATC	5 cut(s)	307, 541, 896, 1405, 1447
BstMAI	GTCTC	2 cut(s)	316, 1962
BstMBI	GATC	5 cut(s)	304, 538, 893, 1402, 1444
BstMWI	GCNNNNNNNGC	6 cut(s)	869, 940, 997, 1002, 1011, 1549
BstNI	CCWGG	3 cut(s)	557, 993, 1288
BstNSI	RCATGY	3 cut(s)	800, 850, 1127
BstSCI	CCNGG	3 cut(s)	555, 991, 1286
BstSFI	CTRYAG	2 cut(s)	126, 804
BstUI	CGCG	2 cut(s)	145, 1086
BstV1I	GCAGC	8 cut(s)	28, 112, 345, 1014, 1360, 1439, 1530, 1925
BstV2I	GAAGAC	2 cut(s)	668, 1029
BstX2I	RGATCY	2 cut(s)	893, 1402
BstYI	RGATCY	2 cut(s)	893, 1402
BsuRI	GGCC	5 cut(s)	554, 602, 957, 1782, 1947
BtgI	CCRYGG	1 cut(s)	1246
BtsCI	GGATG	3 cut(s)	414, 1434, 1504
BtsI	GCAGTG	2 cut(s)	1071, 1411
BtsIMutI	CAGTG	3 cut(s)	1071, 1411, 1652
BveI	ACCTGC	1 cut(s)	996
Cac8I	GCNNGC	3 cut(s)	919, 998, 1125
CaiI	CAGNNNCTG	1 cut(s)	917
CciI	TCATGA	1 cut(s)	1038
CfoI	GCGC	3 cut(s)	147, 1002, 1086
Cfr13I	GGNCC	6 cut(s)	463, 553, 955, 1353, 1813, 1973
CseI	GACGC	1 cut(s)	1243
Csp6I	GTAC	5 cut(s)	94, 296, 813, 881, 1792
CviAII	CATG	8 cut(s)	713, 797, 847, 935, 1034, 1039, 1124, 1961
CviQI	GTAC	5 cut(s)	94, 296, 813, 881, 1792
DdeI	CTNAG	2 cut(s)	1509, 1953
DpnI	GATC	5 cut(s)	306, 540, 895, 1404, 1446
DpnII	GATC	5 cut(s)	304, 538, 893, 1402, 1444
DraI	TTTAAA	1 cut(s)	607
EaeI	YGGCCR	1 cut(s)	1780
Eam1104I	CTCTTC	4 cut(s)	585, 712, 1533, 1836
EarI	CTCTTC	4 cut(s)	585, 712, 1533, 1836
Ecl136II	GAGCTC	1 cut(s)	106
Eco130I	CCWWGG	1 cut(s)	1783
Eco147I	AGGCCT	2 cut(s)	602, 1947
Eco24I	GRGCYC	1 cut(s)	108
Eco32I	GATATC	2 cut(s)	255, 1363
Eco47I	GGWCC	4 cut(s)	463, 1353, 1813, 1973
Eco53kI	GAGCTC	1 cut(s)	106
Eco57I	CTGAAG	2 cut(s)	566, 1718
EcoICRI	GAGCTC	1 cut(s)	106
EcoO109I	RGGNCCY	1 cut(s)	1973
EcoRI	GAATTC	1 cut(s)	76
EcoRII	CCWGG	3 cut(s)	555, 991, 1286
EcoRV	GATATC	2 cut(s)	255, 1363
EcoT14I	CCWWGG	1 cut(s)	1783
EcoT22I	ATGCAT	1 cut(s)	936
EcoT38I	GRGCYC	1 cut(s)	108
ErhI	CCWWGG	1 cut(s)	1783
FaeI	CATG	8 cut(s)	716, 800, 850, 938, 1037, 1042, 1127, 1964
FalI	AAGNNNNNCTT	2 cut(s)	766, 798
FaqI	GGGAC	1 cut(s)	573
FatI	CATG	8 cut(s)	712, 796, 846, 934, 1033, 1038, 1123, 1960
FauI	CCCGC	1 cut(s)	1079
FbaI	TGATCA	1 cut(s)	538
Fnu4HI	GCNGC	8 cut(s)	42, 126, 334, 1003, 1374, 1453, 1544, 1914
FokI	GGATG	3 cut(s)	421, 1421, 1491
FriOI	GRGCYC	1 cut(s)	108
Fsp4HI	GCNGC	8 cut(s)	42, 126, 334, 1003, 1374, 1453, 1544, 1914
FspBI	CTAG	5 cut(s)	405, 531, 959, 1481, 1977
GlaI	GCGC	3 cut(s)	146, 1001, 1085
GluI	GCNGC	8 cut(s)	42, 126, 334, 1003, 1374, 1453, 1544, 1914
GsaI	CCCAGC	1 cut(s)	416
GsuI	CTGGAG	2 cut(s)	966, 1309
HaeIII	GGCC	5 cut(s)	554, 602, 957, 1782, 1947
HapII	CCGG	1 cut(s)	595
HgaI	GACGC	1 cut(s)	1243
HhaI	GCGC	3 cut(s)	147, 1002, 1086
Hin1II	CATG	8 cut(s)	716, 800, 850, 938, 1037, 1042, 1127, 1964
Hin6I	GCGC	3 cut(s)	145, 1000, 1084
HinP1I	GCGC	3 cut(s)	145, 1000, 1084
HincII	GTYRAC	2 cut(s)	1523, 1864
HindII	GTYRAC	2 cut(s)	1523, 1864
HindIII	AAGCTT	1 cut(s)	1583
HinfI	GANTC	4 cut(s)	188, 309, 977, 1901
HpaI	GTTAAC	1 cut(s)	1864
HpaII	CCGG	1 cut(s)	595
HphI	GGTGA	1 cut(s)	241
Hpy166II	GTNNAC	3 cut(s)	1348, 1523, 1864
Hpy188I	TCNGA	6 cut(s)	463, 913, 1195, 1737, 1873, 2025
Hpy8I	GTNNAC	3 cut(s)	1348, 1523, 1864
HpyAV	CCTTC	7 cut(s)	592, 1064, 1387, 1421, 1577, 1742, 1958
HpyCH4III	ACNGT	4 cut(s)	476, 1227, 1247, 1532
HpyCH4IV	ACGT	3 cut(s)	429, 1794, 1860
HpyF10VI	GCNNNNNNNGC	6 cut(s)	869, 940, 997, 1002, 1011, 1549
HpyF3I	CTNAG	2 cut(s)	1509, 1953
HpySE526I	ACGT	3 cut(s)	429, 1794, 1860
Hsp92II	CATG	8 cut(s)	716, 800, 850, 938, 1037, 1042, 1127, 1964
HspAI	GCGC	3 cut(s)	145, 1000, 1084
Ksp22I	TGATCA	1 cut(s)	538
KspAI	GTTAAC	1 cut(s)	1864
Kzo9I	GATC	5 cut(s)	304, 538, 893, 1402, 1444
LguI	GCTCTTC	2 cut(s)	585, 1533
LmnI	GCTCC	2 cut(s)	948, 1430
Lsp1109I	GCAGC	8 cut(s)	28, 112, 345, 1014, 1360, 1439, 1530, 1925
LweI	GCATC	4 cut(s)	226, 399, 904, 1282
MaeI	CTAG	5 cut(s)	405, 531, 959, 1481, 1977
MaeII	ACGT	3 cut(s)	429, 1794, 1860
MaeIII	GTNAC	4 cut(s)	384, 1221, 1227, 1650
MalI	GATC	5 cut(s)	306, 540, 895, 1404, 1446
MboI	GATC	5 cut(s)	304, 538, 893, 1402, 1444
MfeI	CAATTG	1 cut(s)	873
MflI	RGATCY	2 cut(s)	893, 1402
MhlI	GDGCHC	1 cut(s)	108
MlsI	TGGCCA	1 cut(s)	1782
MluNI	TGGCCA	1 cut(s)	1782
MlyI	GAGTC	1 cut(s)	318
MmeI	TCCRAC	2 cut(s)	450, 1380
Mox20I	TGGCCA	1 cut(s)	1782
Mph1103I	ATGCAT	1 cut(s)	936
MroXI	GAANNNNTTC	3 cut(s)	579, 781, 966
MscI	TGGCCA	1 cut(s)	1782
MslI	CAYNNNNRTG	2 cut(s)	1122, 1718
Msp20I	TGGCCA	1 cut(s)	1782
MspA1I	CMGCKG	1 cut(s)	637
MspI	CCGG	1 cut(s)	595
MspR9I	CCNGG	3 cut(s)	557, 993, 1288
MunI	CAATTG	1 cut(s)	873
Mva1269I	GAATGC	1 cut(s)	1709
MvaI	CCWGG	3 cut(s)	557, 993, 1288
MvnI	CGCG	2 cut(s)	145, 1086
MwoI	GCNNNNNNNGC	6 cut(s)	869, 940, 997, 1002, 1011, 1549
NdeII	GATC	5 cut(s)	304, 538, 893, 1402, 1444
NlaIII	CATG	8 cut(s)	716, 800, 850, 938, 1037, 1042, 1127, 1964
NlaIV	GGNNCC	4 cut(s)	1244, 1432, 1814, 2007
NmeAIII	GCCGAG	1 cut(s)	1428
NmuCI	GTSAC	1 cut(s)	1650
NsiI	ATGCAT	1 cut(s)	936
NspI	RCATGY	3 cut(s)	800, 850, 1127
PaeI	GCATGC	1 cut(s)	1127
PagI	TCATGA	1 cut(s)	1038
PasI	CCCWGGG	1 cut(s)	556
PceI	AGGCCT	2 cut(s)	602, 1947
PciI	ACATGT	1 cut(s)	846
PciSI	GCTCTTC	2 cut(s)	585, 1533
PcsI	WCGNNNNNNNCGW	1 cut(s)	435
PctI	GAATGC	1 cut(s)	1709
PdmI	GAANNNNTTC	3 cut(s)	579, 781, 966
PfeI	GAWTC	3 cut(s)	188, 977, 1901
PflMI	CCANNNNNTGG	1 cut(s)	952
PkrI	GCNGC	8 cut(s)	43, 127, 335, 1004, 1375, 1454, 1545, 1915
PleI	GAGTC	1 cut(s)	317
PpsI	GAGTC	1 cut(s)	317
PpuMI	RGGWCCY	1 cut(s)	1973
PscI	ACATGT	1 cut(s)	846
PshBI	ATTAAT	1 cut(s)	570
PsiI	TTATAA	1 cut(s)	2001
Psp124BI	GAGCTC	1 cut(s)	108
Psp1406I	AACGTT	1 cut(s)	1860
Psp5II	RGGWCCY	1 cut(s)	1973
Psp6I	CCWGG	3 cut(s)	555, 991, 1286
PspFI	CCCAGC	1 cut(s)	412
PspGI	CCWGG	3 cut(s)	555, 991, 1286
PspN4I	GGNNCC	4 cut(s)	1244, 1432, 1814, 2007
PspPI	GGNCC	6 cut(s)	463, 553, 955, 1353, 1813, 1973
PspPPI	RGGWCCY	1 cut(s)	1973
PstI	CTGCAG	1 cut(s)	130
PstNI	CAGNNNCTG	1 cut(s)	917
PsuI	RGATCY	2 cut(s)	893, 1402
PvuII	CAGCTG	1 cut(s)	637
RsaI	GTAC	5 cut(s)	95, 297, 814, 882, 1793
RsaNI	GTAC	5 cut(s)	94, 296, 813, 881, 1792
RseI	CAYNNNNRTG	2 cut(s)	1122, 1718
SacI	GAGCTC	1 cut(s)	108
SapI	GCTCTTC	2 cut(s)	585, 1533
SatI	GCNGC	8 cut(s)	42, 126, 334, 1003, 1374, 1453, 1544, 1914
Sau3AI	GATC	5 cut(s)	304, 538, 893, 1402, 1444
Sau96I	GGNCC	6 cut(s)	463, 553, 955, 1353, 1813, 1973
ScaI	AGTACT	1 cut(s)	297
SchI	GAGTC	1 cut(s)	318
ScrFI	CCNGG	3 cut(s)	557, 993, 1288
SduI	GDGCHC	1 cut(s)	108
SfaNI	GCATC	4 cut(s)	226, 399, 904, 1282
SfcI	CTRYAG	2 cut(s)	126, 804
SinI	GGWCC	4 cut(s)	463, 1353, 1813, 1973
SmiMI	CAYNNNNRTG	2 cut(s)	1122, 1718
SphI	GCATGC	1 cut(s)	1127
SseBI	AGGCCT	2 cut(s)	602, 1947
SsiI	CCGC	1 cut(s)	1086
SspI	AATATT	1 cut(s)	568
SspMI	CTAG	5 cut(s)	405, 531, 959, 1481, 1977
SstI	GAGCTC	1 cut(s)	108
StuI	AGGCCT	2 cut(s)	602, 1947
StyD4I	CCNGG	3 cut(s)	555, 991, 1286
StyI	CCWWGG	1 cut(s)	1783
TaaI	ACNGT	4 cut(s)	476, 1227, 1247, 1532
TaiI	ACGT	3 cut(s)	432, 1797, 1863
TaqI	TCGA	4 cut(s)	164, 307, 724, 1139
TaqII	GACCGA	1 cut(s)	1508
TatI	WGTACW	2 cut(s)	295, 880
TfiI	GAWTC	3 cut(s)	188, 977, 1901
TscAI	CASTG	3 cut(s)	1071, 1418, 1659
TseFI	GTSAC	1 cut(s)	1650
TseI	GCWGC	8 cut(s)	41, 125, 333, 1002, 1373, 1452, 1543, 1913
Tsp45I	GTSAC	1 cut(s)	1650
TspGWI	ACGGA	1 cut(s)	1805
TspRI	CASTG	3 cut(s)	1071, 1418, 1659
Van91I	CCANNNNNTGG	1 cut(s)	952
VpaK11BI	GGWCC	4 cut(s)	463, 1353, 1813, 1973
VspI	ATTAAT	1 cut(s)	570
XapI	RAATTY	6 cut(s)	30, 61, 76, 1150, 1760, 1887
XbaI	TCTAGA	1 cut(s)	1480
XceI	RCATGY	3 cut(s)	800, 850, 1127
XmnI	GAANNNNTTC	3 cut(s)	579, 781, 966
XspI	CTAG	5 cut(s)	405, 531, 959, 1481, 1977
ZrmI	AGTACT	1 cut(s)	297
Zsp2I	ATGCAT	1 cut(s)	936

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.