TPL-binding domain in jasmonate signalling
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G36720 AT2G36720 |
| fragaria_vesca | FvH4_6g17100 FvH4_6g17100 FvH4_6g17100 FvH4_6g17100 FvH4_6g17100 FvH4_6g17100 FvH4_6g17100 |
| malus_domestica | MD00G1055800.v1.1 MD12G1104000.v1.1 |
| prunus_persica | Prupe.7G123800_v2.0.a1 |
| pyrus_communis | pycom04g08060 pycom12g10230 pycom12g10240 pycom12g10250 |
| rosa_chinensis | RchiOBHm_Chr3g0471181 |
| rosa_laevigata | RLG00000024200 |
| rosa_multiflora | Rmu_sc0007633.1_g000026 Rmu_sc0010073.1_g000013 |
| rosa_roxburghii | Rroxscaffold_6G00410250 |
| rosa_rugosa | Rorug03G0115800 |
| rosa_samantha | Rh3AG164800 Rh3BG190400 Rh3CG180700 Rh3DG185600 |
| rosa_wichuraiana | Rw3G015550 Rw7G027560 Rw7G029700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 923 |
| Acc16I | TGCGCA | 1 cut(s) | 838 |
| Acc36I | ACCTGC | 2 cut(s) | 278, 1439 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 355 |
| AccII | CGCG | 1 cut(s) | 192 |
| AciI | CCGC | 4 cut(s) | 124, 192, 1104, 1349 |
| AclWI | GGATC | 1 cut(s) | 1058 |
| AcsI | RAATTY | 4 cut(s) | 799, 852, 1139, 1379 |
| AcuI | CTGAAG | 1 cut(s) | 51 |
| AfaI | GTAC | 3 cut(s) | 61, 518, 1154 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 303, 355, 432, 1267, 1491 |
| AflIII | ACRYGT | 1 cut(s) | 1204 |
| AgsI | TTSAA | 7 cut(s) | 30, 545, 781, 1032, 1301, 1321, 1453 |
| AhlI | ACTAGT | 1 cut(s) | 1247 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 624, 656, 753, 785 |
| AluBI | AGCT | 7 cut(s) | 665, 890, 898, 1193, 1306, 1313, 1411 |
| AluI | AGCT | 7 cut(s) | 665, 890, 898, 1193, 1306, 1313, 1411 |
| Alw26I | GTCTC | 5 cut(s) | 348, 471, 947, 976, 1086 |
| AlwI | GGATC | 1 cut(s) | 1058 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 127, 480, 1085 |
| Ama87I | CYCGRG | 1 cut(s) | 1484 |
| AoxI | GGCC | 3 cut(s) | 279, 294, 465 |
| ApeKI | GCWGC | 8 cut(s) | 127, 246, 389, 584, 1306, 1339, 1346, 1408 |
| ApoI | RAATTY | 4 cut(s) | 799, 852, 1139, 1379 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 856 |
| AspA2I | CCTAGG | 1 cut(s) | 461 |
| AspLEI | GCGC | 1 cut(s) | 839 |
| AspS9I | GGNCC | 6 cut(s) | 51, 280, 294, 465, 722, 1371 |
| AsuC2I | CCSGG | 1 cut(s) | 1493 |
| AsuHPI | GGTGA | 3 cut(s) | 521, 1405, 1456 |
| AsuNHI | GCTAGC | 1 cut(s) | 1309 |
| AvaI | CYCGRG | 1 cut(s) | 1484 |
| AvaII | GGWCC | 3 cut(s) | 51, 722, 1371 |
| AvrII | CCTAGG | 1 cut(s) | 461 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1170, 1203 |
| BauI | CACGAG | 2 cut(s) | 350, 504 |
| BbvI | GCAGC | 8 cut(s) | 114, 233, 401, 571, 1293, 1326, 1333, 1420 |
| BccI | CCATC | 6 cut(s) | 422, 446, 593, 928, 972, 1162 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1413, 1447 |
| BclI | TGATCA | 1 cut(s) | 745 |
| BcnI | CCSGG | 1 cut(s) | 1493 |
| BcoDI | GTCTC | 5 cut(s) | 348, 471, 947, 976, 1086 |
| BcuI | ACTAGT | 1 cut(s) | 1247 |
| BfaI | CTAG | 6 cut(s) | 57, 206, 462, 882, 1248, 1310 |
| BfmI | CTRYAG | 3 cut(s) | 615, 844, 1068 |
| BfuAI | ACCTGC | 2 cut(s) | 278, 1439 |
| BisI | GCNGC | 9 cut(s) | 125, 128, 247, 390, 585, 1307, 1340, 1347, 1409 |
| BlnI | CCTAGG | 1 cut(s) | 461 |
| BlsI | GCNGC | 9 cut(s) | 126, 129, 248, 391, 586, 1308, 1341, 1348, 1410 |
| BmcAI | AGTACT | 1 cut(s) | 61 |
| Bme1390I | CCNGG | 1 cut(s) | 1493 |
| Bme18I | GGWCC | 3 cut(s) | 51, 722, 1371 |
| BmeT110I | CYCGRG | 1 cut(s) | 1484 |
| BmgT120I | GGNCC | 6 cut(s) | 51, 280, 294, 465, 722, 1371 |
| BmiI | GGNNCC | 4 cut(s) | 53, 437, 1133, 1482 |
| BmrFI | CCNGG | 1 cut(s) | 1493 |
| BmsI | GCATC | 5 cut(s) | 423, 446, 626, 668, 1066 |
| BmtI | GCTAGC | 1 cut(s) | 1313 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 330, 362 |
| BpuEI | CTTGAG | 1 cut(s) | 31 |
| BpuMI | CCSGG | 1 cut(s) | 1493 |
| Bsa29I | ATCGAT | 1 cut(s) | 610 |
| BsaAI | YACGTR | 1 cut(s) | 1205 |
| BsaI | GGTCTC | 1 cut(s) | 1086 |
| BsaJI | CCNNGG | 4 cut(s) | 393, 461, 1107, 1261 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 303, 355, 432, 1267, 1491 |
| Bse118I | RCCGGY | 1 cut(s) | 1342 |
| Bse1I | ACTGG | 2 cut(s) | 518, 679 |
| BseCI | ATCGAT | 1 cut(s) | 610 |
| BseDI | CCNNGG | 4 cut(s) | 393, 461, 1107, 1261 |
| BseGI | GGATG | 3 cut(s) | 461, 683, 922 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 303, 355, 432, 1267, 1491 |
| BseMII | CTCAG | 2 cut(s) | 882, 1022 |
| BseNI | ACTGG | 2 cut(s) | 518, 679 |
| BseRI | GAGGAG | 1 cut(s) | 900 |
| BseXI | GCAGC | 8 cut(s) | 114, 233, 401, 571, 1293, 1326, 1333, 1420 |
| Bsh1236I | CGCG | 1 cut(s) | 192 |
| BshFI | GGCC | 3 cut(s) | 281, 296, 467 |
| BshVI | ATCGAT | 1 cut(s) | 610 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1484 |
| BsiSI | CCGG | 3 cut(s) | 1343, 1403, 1492 |
| BslFI | GGGAC | 1 cut(s) | 37 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 303, 355, 432, 1267, 1491 |
| BsmAI | GTCTC | 5 cut(s) | 348, 471, 947, 976, 1086 |
| BsmFI | GGGAC | 1 cut(s) | 37 |
| BsmI | GAATGC | 1 cut(s) | 639 |
| BsnI | GGCC | 3 cut(s) | 281, 296, 467 |
| Bso31I | GGTCTC | 1 cut(s) | 1086 |
| BsoBI | CYCGRG | 1 cut(s) | 1484 |
| Bsp143I | GATC | 5 cut(s) | 118, 607, 611, 745, 1063 |
| Bsp19I | CCATGG | 2 cut(s) | 1107, 1261 |
| BspACI | CCGC | 4 cut(s) | 124, 192, 1104, 1349 |
| BspANI | GGCC | 3 cut(s) | 281, 296, 467 |
| BspCNI | CTCAG | 2 cut(s) | 883, 1021 |
| BspDI | ATCGAT | 1 cut(s) | 610 |
| BspFNI | CGCG | 1 cut(s) | 192 |
| BspHI | TCATGA | 1 cut(s) | 1216 |
| BspLI | GGNNCC | 4 cut(s) | 53, 437, 1133, 1482 |
| BspMAI | CTGCAG | 1 cut(s) | 848 |
| BspMI | ACCTGC | 2 cut(s) | 278, 1439 |
| BspOI | GCTAGC | 1 cut(s) | 1313 |
| BspPI | GGATC | 1 cut(s) | 1058 |
| BspTNI | GGTCTC | 1 cut(s) | 1086 |
| BsrFI | RCCGGY | 1 cut(s) | 1342 |
| BsrI | ACTGG | 2 cut(s) | 518, 679 |
| BssAI | RCCGGY | 1 cut(s) | 1342 |
| BssECI | CCNNGG | 4 cut(s) | 393, 461, 1107, 1261 |
| BssMI | GATC | 5 cut(s) | 118, 607, 611, 745, 1063 |
| BssSI | CACGAG | 2 cut(s) | 350, 504 |
| BssT1I | CCWWGG | 4 cut(s) | 393, 461, 1107, 1261 |
| Bst2BI | CACGAG | 2 cut(s) | 350, 504 |
| Bst4CI | ACNGT | 8 cut(s) | 254, 273, 482, 521, 947, 958, 1157, 1183 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 185, 874 |
| BstBAI | YACGTR | 1 cut(s) | 1205 |
| BstC8I | GCNNGC | 3 cut(s) | 190, 1311, 1344 |
| BstDEI | CTNAG | 2 cut(s) | 891, 1008 |
| BstDSI | CCRYGG | 2 cut(s) | 1107, 1261 |
| BstEII | GGTNACC | 1 cut(s) | 1256 |
| BstF5I | GGATG | 3 cut(s) | 461, 683, 922 |
| BstFNI | CGCG | 1 cut(s) | 192 |
| BstHHI | GCGC | 1 cut(s) | 839 |
| BstKTI | GATC | 5 cut(s) | 121, 610, 614, 748, 1066 |
| BstMAI | GTCTC | 5 cut(s) | 348, 471, 947, 976, 1086 |
| BstMBI | GATC | 5 cut(s) | 118, 607, 611, 745, 1063 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 185, 293, 584, 843, 874, 1355, 1408 |
| BstPI | GGTNACC | 1 cut(s) | 1256 |
| BstSCI | CCNGG | 1 cut(s) | 1491 |
| BstSFI | CTRYAG | 3 cut(s) | 615, 844, 1068 |
| BstUI | CGCG | 1 cut(s) | 192 |
| BstV1I | GCAGC | 8 cut(s) | 114, 233, 401, 571, 1293, 1326, 1333, 1420 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1142 |
| Bsu15I | ATCGAT | 1 cut(s) | 610 |
| BsuRI | GGCC | 3 cut(s) | 281, 296, 467 |
| BsuTUI | ATCGAT | 1 cut(s) | 610 |
| BtgI | CCRYGG | 2 cut(s) | 1107, 1261 |
| BtsCI | GGATG | 3 cut(s) | 461, 683, 922 |
| BtsIMutI | CAGTG | 5 cut(s) | 75, 104, 259, 755, 967 |
| BveI | ACCTGC | 2 cut(s) | 278, 1439 |
| Cac8I | GCNNGC | 3 cut(s) | 190, 1311, 1344 |
| CaiI | CAGNNNCTG | 3 cut(s) | 127, 480, 1085 |
| CciI | TCATGA | 1 cut(s) | 1216 |
| CfoI | GCGC | 1 cut(s) | 839 |
| Cfr10I | RCCGGY | 1 cut(s) | 1342 |
| Cfr13I | GGNCC | 6 cut(s) | 51, 280, 294, 465, 722, 1371 |
| ClaI | ATCGAT | 1 cut(s) | 610 |
| Csp6I | GTAC | 3 cut(s) | 60, 517, 1153 |
| CviAII | CATG | 8 cut(s) | 284, 767, 1052, 1108, 1217, 1262, 1465, 1506 |
| CviQI | GTAC | 3 cut(s) | 60, 517, 1153 |
| DdeI | CTNAG | 2 cut(s) | 891, 1008 |
| DpnI | GATC | 5 cut(s) | 120, 609, 613, 747, 1065 |
| DpnII | GATC | 5 cut(s) | 118, 607, 611, 745, 1063 |
| DraI | TTTAAA | 1 cut(s) | 804 |
| Eco130I | CCWWGG | 4 cut(s) | 393, 461, 1107, 1261 |
| Eco31I | GGTCTC | 1 cut(s) | 1086 |
| Eco47I | GGWCC | 3 cut(s) | 51, 722, 1371 |
| Eco57I | CTGAAG | 1 cut(s) | 51 |
| Eco88I | CYCGRG | 1 cut(s) | 1484 |
| Eco91I | GGTNACC | 1 cut(s) | 1256 |
| EcoO109I | RGGNCCY | 2 cut(s) | 51, 465 |
| EcoO65I | GGTNACC | 1 cut(s) | 1256 |
| EcoRI | GAATTC | 1 cut(s) | 852 |
| EcoT14I | CCWWGG | 4 cut(s) | 393, 461, 1107, 1261 |
| EcoT22I | ATGCAT | 2 cut(s) | 319, 641 |
| ErhI | CCWWGG | 4 cut(s) | 393, 461, 1107, 1261 |
| FaeI | CATG | 8 cut(s) | 287, 770, 1055, 1111, 1220, 1265, 1468, 1509 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1259, 1291 |
| FaqI | GGGAC | 1 cut(s) | 37 |
| FatI | CATG | 8 cut(s) | 283, 766, 1051, 1107, 1216, 1261, 1464, 1505 |
| FauI | CCCGC | 1 cut(s) | 1111 |
| FauNDI | CATATG | 1 cut(s) | 1367 |
| FbaI | TGATCA | 1 cut(s) | 745 |
| Fnu4HI | GCNGC | 9 cut(s) | 125, 128, 247, 390, 585, 1307, 1340, 1347, 1409 |
| FokI | GGATG | 3 cut(s) | 468, 690, 929 |
| Fsp4HI | GCNGC | 9 cut(s) | 125, 128, 247, 390, 585, 1307, 1340, 1347, 1409 |
| FspBI | CTAG | 6 cut(s) | 57, 206, 462, 882, 1248, 1310 |
| FspI | TGCGCA | 1 cut(s) | 838 |
| GlaI | GCGC | 1 cut(s) | 838 |
| GluI | GCNGC | 9 cut(s) | 125, 128, 247, 390, 585, 1307, 1340, 1347, 1409 |
| HaeIII | GGCC | 3 cut(s) | 281, 296, 467 |
| HapII | CCGG | 3 cut(s) | 1343, 1403, 1492 |
| HhaI | GCGC | 1 cut(s) | 839 |
| Hin1II | CATG | 8 cut(s) | 287, 770, 1055, 1111, 1220, 1265, 1468, 1509 |
| Hin6I | GCGC | 1 cut(s) | 837 |
| HinP1I | GCGC | 1 cut(s) | 837 |
| HincII | GTYRAC | 1 cut(s) | 1174 |
| HindII | GTYRAC | 1 cut(s) | 1174 |
| HindIII | AAGCTT | 1 cut(s) | 896 |
| HinfI | GANTC | 4 cut(s) | 905, 984, 1082, 1361 |
| HpaII | CCGG | 3 cut(s) | 1343, 1403, 1492 |
| HphI | GGTGA | 3 cut(s) | 521, 1405, 1456 |
| Hpy166II | GTNNAC | 2 cut(s) | 725, 1174 |
| Hpy188I | TCNGA | 1 cut(s) | 381 |
| Hpy188III | TCNNGA | 7 cut(s) | 372, 714, 902, 1010, 1217, 1318, 1484 |
| Hpy8I | GTNNAC | 2 cut(s) | 725, 1174 |
| HpyAV | CCTTC | 5 cut(s) | 143, 478, 585, 751, 1113 |
| HpyCH4III | ACNGT | 8 cut(s) | 254, 273, 482, 521, 947, 958, 1157, 1183 |
| HpyCH4IV | ACGT | 2 cut(s) | 1204, 1460 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 185, 293, 584, 843, 874, 1355, 1408 |
| HpyF3I | CTNAG | 2 cut(s) | 891, 1008 |
| HpySE526I | ACGT | 2 cut(s) | 1204, 1460 |
| Hsp92II | CATG | 8 cut(s) | 287, 770, 1055, 1111, 1220, 1265, 1468, 1509 |
| HspAI | GCGC | 1 cut(s) | 837 |
| KroI | GCCGGC | 1 cut(s) | 1342 |
| KroNI | GCCGGC | 1 cut(s) | 1344 |
| Ksp22I | TGATCA | 1 cut(s) | 745 |
| Kzo9I | GATC | 5 cut(s) | 118, 607, 611, 745, 1063 |
| LmnI | GCTCC | 3 cut(s) | 887, 1131, 1405 |
| Lsp1109I | GCAGC | 8 cut(s) | 114, 233, 401, 571, 1293, 1326, 1333, 1420 |
| LweI | GCATC | 5 cut(s) | 423, 446, 626, 668, 1066 |
| MaeI | CTAG | 6 cut(s) | 57, 206, 462, 882, 1248, 1310 |
| MaeII | ACGT | 2 cut(s) | 1204, 1460 |
| MaeIII | GTNAC | 5 cut(s) | 212, 267, 509, 1256, 1444 |
| MalI | GATC | 5 cut(s) | 120, 609, 613, 747, 1065 |
| MboI | GATC | 5 cut(s) | 118, 607, 611, 745, 1063 |
| MlyI | GAGTC | 2 cut(s) | 899, 978 |
| MmeI | TCCRAC | 2 cut(s) | 359, 1303 |
| MnlI | CCTC | 9 cut(s) | 96, 139, 250, 271, 368, 513, 686, 878, 931 |
| Mph1103I | ATGCAT | 2 cut(s) | 319, 641 |
| MroNI | GCCGGC | 1 cut(s) | 1342 |
| MroXI | GAANNNNTTC | 1 cut(s) | 856 |
| MseI | TTAA | 1 cut(s) | 803 |
| MslI | CAYNNNNRTG | 1 cut(s) | 915 |
| MspA1I | CMGCKG | 2 cut(s) | 124, 1193 |
| MspI | CCGG | 3 cut(s) | 1343, 1403, 1492 |
| MspR9I | CCNGG | 1 cut(s) | 1493 |
| Mva1269I | GAATGC | 1 cut(s) | 639 |
| MvnI | CGCG | 1 cut(s) | 192 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 185, 293, 584, 843, 874, 1355, 1408 |
| NaeI | GCCGGC | 1 cut(s) | 1344 |
| NciI | CCSGG | 1 cut(s) | 1493 |
| NcoI | CCATGG | 2 cut(s) | 1107, 1261 |
| NdeI | CATATG | 1 cut(s) | 1367 |
| NdeII | GATC | 5 cut(s) | 118, 607, 611, 745, 1063 |
| NgoMIV | GCCGGC | 1 cut(s) | 1342 |
| NheI | GCTAGC | 1 cut(s) | 1309 |
| NlaIII | CATG | 8 cut(s) | 287, 770, 1055, 1111, 1220, 1265, 1468, 1509 |
| NlaIV | GGNNCC | 4 cut(s) | 53, 437, 1133, 1482 |
| NmuCI | GTSAC | 3 cut(s) | 267, 509, 1444 |
| NsbI | TGCGCA | 1 cut(s) | 838 |
| NsiI | ATGCAT | 2 cut(s) | 319, 641 |
| PagI | TCATGA | 1 cut(s) | 1216 |
| PctI | GAATGC | 1 cut(s) | 639 |
| PdiI | GCCGGC | 1 cut(s) | 1344 |
| PdmI | GAANNNNTTC | 1 cut(s) | 856 |
| PfeI | GAWTC | 2 cut(s) | 1082, 1361 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 355 |
| PkrI | GCNGC | 9 cut(s) | 126, 129, 248, 391, 586, 1308, 1341, 1348, 1410 |
| PleI | GAGTC | 2 cut(s) | 899, 978 |
| PpsI | GAGTC | 2 cut(s) | 899, 978 |
| Ppu21I | YACGTR | 1 cut(s) | 1205 |
| PpuMI | RGGWCCY | 1 cut(s) | 51 |
| PsiI | TTATAA | 1 cut(s) | 923 |
| Psp5II | RGGWCCY | 1 cut(s) | 51 |
| PspEI | GGTNACC | 1 cut(s) | 1256 |
| PspN4I | GGNNCC | 4 cut(s) | 53, 437, 1133, 1482 |
| PspPI | GGNCC | 6 cut(s) | 51, 280, 294, 465, 722, 1371 |
| PspPPI | RGGWCCY | 1 cut(s) | 51 |
| PstI | CTGCAG | 1 cut(s) | 848 |
| PstNI | CAGNNNCTG | 3 cut(s) | 127, 480, 1085 |
| PvuII | CAGCTG | 1 cut(s) | 1193 |
| RsaI | GTAC | 3 cut(s) | 61, 518, 1154 |
| RsaNI | GTAC | 3 cut(s) | 60, 517, 1153 |
| RseI | CAYNNNNRTG | 1 cut(s) | 915 |
| SaqAI | TTAA | 1 cut(s) | 803 |
| SatI | GCNGC | 9 cut(s) | 125, 128, 247, 390, 585, 1307, 1340, 1347, 1409 |
| Sau3AI | GATC | 5 cut(s) | 118, 607, 611, 745, 1063 |
| Sau96I | GGNCC | 6 cut(s) | 51, 280, 294, 465, 722, 1371 |
| ScaI | AGTACT | 1 cut(s) | 61 |
| SchI | GAGTC | 2 cut(s) | 899, 978 |
| ScrFI | CCNGG | 1 cut(s) | 1493 |
| SfaNI | GCATC | 5 cut(s) | 423, 446, 626, 668, 1066 |
| SfcI | CTRYAG | 3 cut(s) | 615, 844, 1068 |
| SinI | GGWCC | 3 cut(s) | 51, 722, 1371 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 915 |
| SmlI | CTYRAG | 1 cut(s) | 46 |
| SmoI | CTYRAG | 1 cut(s) | 46 |
| SpeI | ACTAGT | 1 cut(s) | 1247 |
| SsiI | CCGC | 4 cut(s) | 124, 192, 1104, 1349 |
| SspI | AATATT | 1 cut(s) | 234 |
| SspMI | CTAG | 6 cut(s) | 57, 206, 462, 882, 1248, 1310 |
| StyD4I | CCNGG | 1 cut(s) | 1491 |
| StyI | CCWWGG | 4 cut(s) | 393, 461, 1107, 1261 |
| TaaI | ACNGT | 8 cut(s) | 254, 273, 482, 521, 947, 958, 1157, 1183 |
| TaiI | ACGT | 2 cut(s) | 1207, 1463 |
| TaqI | TCGA | 3 cut(s) | 144, 610, 1178 |
| TaqII | GACCGA | 1 cut(s) | 1388 |
| TatI | WGTACW | 2 cut(s) | 59, 1152 |
| TauI | GCSGC | 1 cut(s) | 127 |
| TfiI | GAWTC | 2 cut(s) | 1082, 1361 |
| Tru1I | TTAA | 1 cut(s) | 803 |
| Tru9I | TTAA | 1 cut(s) | 803 |
| TscAI | CASTG | 5 cut(s) | 75, 104, 259, 755, 967 |
| TseFI | GTSAC | 3 cut(s) | 267, 509, 1444 |
| TseI | GCWGC | 8 cut(s) | 127, 246, 389, 584, 1306, 1339, 1346, 1408 |
| Tsp45I | GTSAC | 3 cut(s) | 267, 509, 1444 |
| TspDTI | ATGAA | 4 cut(s) | 585, 845, 1233, 1412 |
| TspGWI | ACGGA | 1 cut(s) | 180 |
| TspRI | CASTG | 5 cut(s) | 75, 104, 259, 755, 967 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 355 |
| VpaK11BI | GGWCC | 3 cut(s) | 51, 722, 1371 |
| XapI | RAATTY | 4 cut(s) | 799, 852, 1139, 1379 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 822 |
| XmaJI | CCTAGG | 1 cut(s) | 461 |
| XmnI | GAANNNNTTC | 1 cut(s) | 856 |
| XspI | CTAG | 6 cut(s) | 57, 206, 462, 882, 1248, 1310 |
| ZrmI | AGTACT | 1 cut(s) | 61 |
| Zsp2I | ATGCAT | 2 cut(s) | 319, 641 |