Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0005267

Physical Location & Seq

Genomic Coordinates Forward (+)

32682955 .. 32691553

Gene Structure 8599 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00410250.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1740 bp

ATGAAGCGAGATTTGGCTTCTGTATTGGAGGGCCAGTCTCAACTCGCCGATTCTGTGGTTGGGACTCGCGCCGAGGAGGCGAGCCCTACGCTTCGAGTTTATGAGAGACTGAACTCCAAGAGATTCAAAGGCGCTATTGTTGATGGTTTGATTGTGTATACGCGGGCCAGGAAGCCCGGGATCAATGGCCGGAGTGGTTTATCGGAGGATGCGAAAGCTGCCGCCGCCGGGAGTAAGAGATTGGATGAGGTCAGAAATGATGGAAGCATTTCTGCTCCGGGGTTTGAGAGTGATCATCTGACTGAAGTTGTAGTTAGGGATGAAGGGAGTAGCGGTTTGGTGATACCTAGGAGTAGGGGTGGGAAGGGGAGTGAGATATGGATGCCTTTCGTTGGGGATCACGATATCGATGGGGAGTTGGTTGAAGTTGTAGTTAGAGAAGAGGGCAATTGTAGTTTCGAAATGAGTAGAAAGCGCACTGTTGCCTTGAACGGCAGAGCTGCTAATAGTAGAAAGAGGGGAAAGGATTCACAACCAAGGTCATCGAGGAGGAAGTGCTTCACGCGATCCACATTGAGACCTAGTGTCGAGCCTCTGGTGGAAAATGGATCAGTGGCTGTGCTAGGATCAGAGGCTTTGCCTGGATCAGAGGCCGTGACAGGGTTAGAGATTGTGCCAGTTGAAGCGATTTCTGATGTAGAGGAGGAGAAACTAGTTGAAGTCAGTACACTGCTGTCAAATAGTAAGCTAGAATTGAAAATGTCAAAAAAGGTTGTGCTTGACAGGAAGCCTACTACTGTCAAGGAGCTGTTTGATACAGGCTTGGTTGATGGGGTAACAGTGATTTACATGGGTAGCAAGAAGGCGTTTGGTCTGCGGGGCACAATAAGAGACGGAGGGATTTTGTGTTCATGTATATCTTGCAATGGCTGCAGAGTCATTCCACCATCTCAATTTGAGATTCATGCTTGTAAAACATACAGACGAGCAGCACAGTACATTTGCCTTGAGAATGGAAGGAGCCTGCTCGATCTTCTGAAGGTGTGCAGGAATGCTTCTCTGCATACATTGGAGACAACAATTCAGAAGTTCATCAATTCTTCACCAATAGACAAATATTTCACTTGTAAAAACTGTAGCGTCTCCTTTCCTCCTTATTGTGCTCTTGAAGATGGATCGCTTTGCTATTCTTGCATGGAGTCAAATAAACCTGACAGCCCATCTCAGGAAAATAGTAAAAATCTCAGAGCTTTGCTGCCTGCTTCATTGTCAATGTCCCCAAAAAATGCAAAATCCCCAAAAACTGCAACACCGAAGTCTGCAAGAAATGGAATTTTAAAGACTCCTAAAAGTACAATCTTAAGGCCCCCAAGAGGTGCTATCTCAAAGTCCCCCAAAAGTGCAATCTTAAATTCCACAAAGAGGGCAATCTCAAAGTTCCCAAAAAGTGCAATTTCAAAGTCTCCCAAGAGTGCTTCTCTTTGGAAGACAACTAAGTTATCAACACCAGTTTCGATCTCAAGTCCATCAAAAAGTGCTTCTCCAATGCGCTCAGAATATAAGAGTGGATGGAAGATAACATCAAAGTCATCAAAATCAGTCCTGATCTCAAGGTCCCCAAGTGCTGCTTCAATGTATTTTTCTTCACAAAAGAAAAGTCAGTGGAGGATTACAACTAAAGATCAGCGCCTGCATAAGTTGGTTTTGAGGAAGGTGGATTGCCTGATGGAAGCGAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000118 GO:0000122 GO:0000228 GO:0000785 GO:0000790 GO:0001085 GO:0001103 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005737 GO:0005813 GO:0005815 GO:0005856 GO:0006355 GO:0006357 GO:0008134 GO:0008150 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0015630 GO:0016043 GO:0016581 GO:0017053 GO:0019219 GO:0019222 GO:0019899 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032991 GO:0032993 GO:0042826 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044446 GO:0044451 GO:0044454 GO:0044464 GO:0045892 GO:0045934 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050808 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0060255 GO:0065007 GO:0070013 GO:0070491 GO:0070603 GO:0071840 GO:0072553 GO:0080090 GO:0090545 GO:0090568 GO:0099172 GO:1902494 GO:1902679 GO:1903506 GO:1903507 GO:1904949 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Jas PHD

Protein Analysis

579

Amino Acids

62.98

Weight (kDa)

9.76

Isoelectric Point (pI)

53.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TDBD	PF16135	294 - 349	1.8e-12	Tify domain binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005267)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G36720 AT2G36720
fragaria_vesca	FvH4_6g17100 FvH4_6g17100 FvH4_6g17100 FvH4_6g17100 FvH4_6g17100 FvH4_6g17100 FvH4_6g17100
malus_domestica	MD00G1055800.v1.1 MD12G1104000.v1.1
prunus_persica	Prupe.7G123800_v2.0.a1
pyrus_communis	pycom04g08060 pycom12g10230 pycom12g10240 pycom12g10250
rosa_chinensis	RchiOBHm_Chr3g0471181
rosa_laevigata	RLG00000024200
rosa_multiflora	Rmu_sc0007633.1_g000026 Rmu_sc0010073.1_g000013
rosa_roxburghii	Rroxscaffold_6G00410250
rosa_rugosa	Rorug03G0115800
rosa_samantha	Rh3AG164800 Rh3BG190400 Rh3CG180700 Rh3DG185600
rosa_wichuraiana	Rw3G015550 Rw7G027560 Rw7G029700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	158
AccII	CGCG	3 cut(s)	69, 163, 565
AciI	CCGC	5 cut(s)	163, 222, 225, 333, 877
AclWI	GGATC	7 cut(s)	188, 405, 561, 616, 634, 652, 1183
AcoI	YGGCCR	1 cut(s)	187
AcsI	RAATTY	2 cut(s)	1332, 1411
AcuI	CTGAAG	2 cut(s)	324, 1058
AfaI	GTAC	3 cut(s)	727, 998, 1354
AfiI	CCNNNNNNNGG	6 cut(s)	228, 392, 660, 1225, 1373, 1422
AflII	CTTAAG	1 cut(s)	1360
AgsI	TTSAA	9 cut(s)	127, 425, 490, 683, 719, 757, 1169, 1458, 1632
AhdI	GACNNNNNGTC	1 cut(s)	584
AhlI	ACTAGT	1 cut(s)	712
AjnI	CCWGG	2 cut(s)	167, 640
AjuI	GAANNNNNNNTTGG	3 cut(s)	28, 1612, 1644
AloI	GAACNNNNNNTCC	2 cut(s)	892, 924
AluBI	AGCT	5 cut(s)	218, 500, 748, 808, 1250
AluI	AGCT	5 cut(s)	218, 500, 748, 808, 1250
Alw21I	GWGCWC	1 cut(s)	1165
Alw26I	GTCTC	7 cut(s)	42, 100, 571, 885, 1067, 1147, 1467
AlwI	GGATC	7 cut(s)	188, 405, 561, 616, 634, 652, 1183
AlwNI	CAGNNNCTG	2 cut(s)	617, 1690
Ama87I	CYCGRG	1 cut(s)	176
AoxI	GGCC	5 cut(s)	31, 165, 187, 651, 1364
ApeKI	GCWGC	6 cut(s)	218, 500, 930, 989, 1255, 1625
ApoI	RAATTY	2 cut(s)	1332, 1411
ArsI	GACNNNNNNTTYG	2 cut(s)	1642, 1674
Asp700I	GAANNNNTTC	3 cut(s)	268, 526, 557
AspA2I	CCTAGG	1 cut(s)	347
AspLEI	GCGC	5 cut(s)	71, 134, 477, 1551, 1689
AspS9I	GGNCC	4 cut(s)	31, 165, 1365, 1614
AsuC2I	CCSGG	4 cut(s)	177, 178, 229, 279
AsuHPI	GGTGA	2 cut(s)	352, 1095
AsuII	TTCGAA	1 cut(s)	459
AvaI	CYCGRG	1 cut(s)	176
AvaII	GGWCC	1 cut(s)	1614
AvrII	CCTAGG	1 cut(s)	347
BaeGI	GKGCMC	1 cut(s)	884
BanII	GRGCYC	1 cut(s)	86
BbsI	GAAGAC	1 cut(s)	1493
Bbv12I	GWGCWC	1 cut(s)	1165
BbvI	GCAGC	6 cut(s)	205, 487, 917, 1001, 1242, 1612
BceAI	ACGGC	2 cut(s)	508, 638
BciT130I	CCWGG	2 cut(s)	169, 642
BclI	TGATCA	1 cut(s)	292
BcnI	CCSGG	4 cut(s)	177, 178, 229, 279
BcoDI	GTCTC	7 cut(s)	42, 100, 571, 885, 1067, 1147, 1467
BcuI	ACTAGT	1 cut(s)	712
BfaI	CTAG	5 cut(s)	348, 582, 623, 713, 749
BfmI	CTRYAG	2 cut(s)	931, 1135
BfoI	RGCGCY	2 cut(s)	135, 1690
BfrI	CTTAAG	1 cut(s)	1360
BglI	GCCNNNNNGGC	1 cut(s)	77
BisI	GCNGC	8 cut(s)	219, 222, 225, 501, 931, 990, 1256, 1626
BlnI	CCTAGG	1 cut(s)	347
BlsI	GCNGC	8 cut(s)	220, 223, 226, 502, 932, 991, 1257, 1627
Bme1390I	CCNGG	6 cut(s)	169, 177, 178, 229, 279, 642
Bme18I	GGWCC	1 cut(s)	1614
BmeRI	GACNNNNNGTC	1 cut(s)	584
BmeT110I	CYCGRG	1 cut(s)	176
BmgT120I	GGNCC	4 cut(s)	31, 165, 1365, 1614
BmiI	GGNNCC	3 cut(s)	1022, 1367, 1616
BmrFI	CCNGG	6 cut(s)	169, 177, 178, 229, 279, 642
BmsI	GCATC	2 cut(s)	199, 372
BpiI	GAAGAC	1 cut(s)	1493
BplI	GAGNNNNNCTC	2 cut(s)	1462, 1494
Bpu14I	TTCGAA	1 cut(s)	459
BpuEI	CTTGAG	3 cut(s)	1028, 1504, 1594
BpuMI	CCSGG	4 cut(s)	177, 178, 229, 279
Bsa29I	ATCGAT	1 cut(s)	408
BsaI	GGTCTC	1 cut(s)	571
BsaJI	CCNNGG	5 cut(s)	72, 176, 278, 347, 536
BsaXI	ACNNNNNCTCC	6 cut(s)	20, 50, 319, 343, 349, 373
Bsc4I	CCNNNNNNNGG	6 cut(s)	228, 392, 660, 1225, 1373, 1422
Bse1I	ACTGG	3 cut(s)	34, 677, 1508
Bse3DI	GCAATG	1 cut(s)	931
BseBI	CCWGG	2 cut(s)	169, 642
BseCI	ATCGAT	1 cut(s)	408
BseDI	CCNNGG	5 cut(s)	72, 176, 278, 347, 536
BseGI	GGATG	5 cut(s)	214, 250, 325, 387, 1574
BseLI	CCNNNNNNNGG	6 cut(s)	228, 392, 660, 1225, 1373, 1422
BseMI	GCAATG	1 cut(s)	931
BseMII	CTCAG	3 cut(s)	1238, 1258, 1566
BseNI	ACTGG	3 cut(s)	34, 677, 1508
BseRI	GAGGAG	4 cut(s)	89, 562, 716, 719
BseSI	GKGCMC	1 cut(s)	884
BseXI	GCAGC	6 cut(s)	205, 487, 917, 1001, 1242, 1612
BsgI	GTGCAG	1 cut(s)	1066
Bsh1236I	CGCG	3 cut(s)	69, 163, 565
BshFI	GGCC	5 cut(s)	33, 167, 189, 653, 1366
BshVI	ATCGAT	1 cut(s)	408
BsiHKAI	GWGCWC	1 cut(s)	1165
BsiHKCI	CYCGRG	1 cut(s)	176
BsiSI	CCGG	4 cut(s)	177, 190, 228, 278
BslFI	GGGAC	4 cut(s)	76, 1261, 1375, 1600
BslI	CCNNNNNNNGG	6 cut(s)	228, 392, 660, 1225, 1373, 1422
BsmAI	GTCTC	7 cut(s)	42, 100, 571, 885, 1067, 1147, 1467
BsmBI	CGTCTC	2 cut(s)	885, 1147
BsmFI	GGGAC	4 cut(s)	76, 1261, 1375, 1600
BsmI	GAATGC	1 cut(s)	1057
BsnI	GGCC	5 cut(s)	33, 167, 189, 653, 1366
Bso31I	GGTCTC	1 cut(s)	571
BsoBI	CYCGRG	1 cut(s)	176
Bsp119I	TTCGAA	1 cut(s)	459
Bsp1286I	GDGCHC	3 cut(s)	86, 884, 1165
BspACI	CCGC	5 cut(s)	163, 222, 225, 333, 877
BspANI	GGCC	5 cut(s)	33, 167, 189, 653, 1366
BspCNI	CTCAG	3 cut(s)	1237, 1257, 1565
BspDI	ATCGAT	1 cut(s)	408
BspFNI	CGCG	3 cut(s)	69, 163, 565
BspLI	GGNNCC	3 cut(s)	1022, 1367, 1616
BspMAI	CTGCAG	1 cut(s)	935
BspPI	GGATC	7 cut(s)	188, 405, 561, 616, 634, 652, 1183
BspT104I	TTCGAA	1 cut(s)	459
BspTI	CTTAAG	1 cut(s)	1360
BspTNI	GGTCTC	1 cut(s)	571
BsrDI	GCAATG	1 cut(s)	931
BsrI	ACTGG	3 cut(s)	34, 677, 1508
BssECI	CCNNGG	5 cut(s)	72, 176, 278, 347, 536
BssNAI	GTATAC	1 cut(s)	159
BssT1I	CCWWGG	2 cut(s)	347, 536
Bst1107I	GTATAC	1 cut(s)	159
Bst2UI	CCWGG	2 cut(s)	169, 642
Bst4CI	ACNGT	5 cut(s)	481, 799, 841, 996, 1136
Bst6I	CTCTTC	1 cut(s)	435
BstAFI	CTTAAG	1 cut(s)	1360
BstAPI	GCANNNNNTGC	1 cut(s)	930
BstBI	TTCGAA	1 cut(s)	459
BstC8I	GCNNGC	5 cut(s)	82, 165, 1025, 1260, 1691
BstDEI	CTNAG	4 cut(s)	1224, 1244, 1494, 1552
BstF5I	GGATG	5 cut(s)	214, 250, 325, 387, 1574
BstFNI	CGCG	3 cut(s)	69, 163, 565
BstH2I	RGCGCY	2 cut(s)	135, 1690
BstHHI	GCGC	5 cut(s)	71, 134, 477, 1551, 1689
BstMAI	GTCTC	7 cut(s)	42, 100, 571, 885, 1067, 1147, 1467
BstMWI	GCNNNNNNNGC	5 cut(s)	77, 218, 224, 930, 1191
BstNI	CCWGG	2 cut(s)	169, 642
BstSCI	CCNGG	6 cut(s)	167, 175, 176, 227, 277, 640
BstSFI	CTRYAG	2 cut(s)	931, 1135
BstSLI	GKGCMC	1 cut(s)	884
BstUI	CGCG	3 cut(s)	69, 163, 565
BstV1I	GCAGC	6 cut(s)	205, 487, 917, 1001, 1242, 1612
BstV2I	GAAGAC	1 cut(s)	1493
BstZ17I	GTATAC	1 cut(s)	159
Bsu15I	ATCGAT	1 cut(s)	408
BsuRI	GGCC	5 cut(s)	33, 167, 189, 653, 1366
BsuTUI	ATCGAT	1 cut(s)	408
BtsCI	GGATG	5 cut(s)	214, 250, 325, 387, 1574
BtsI	GCAGTG	1 cut(s)	728
BtsIMutI	CAGTG	5 cut(s)	477, 618, 728, 846, 1667
Cac8I	GCNNGC	5 cut(s)	82, 165, 1025, 1260, 1691
CaiI	CAGNNNCTG	2 cut(s)	617, 1690
CfoI	GCGC	5 cut(s)	71, 134, 477, 1551, 1689
Cfr13I	GGNCC	4 cut(s)	31, 165, 1365, 1614
Cfr9I	CCCGGG	1 cut(s)	176
ClaI	ATCGAT	1 cut(s)	408
CseI	GACGC	1 cut(s)	1129
Csp6I	GTAC	3 cut(s)	726, 997, 1353
CviAII	CATG	4 cut(s)	850, 912, 965, 1195
CviQI	GTAC	3 cut(s)	726, 997, 1353
DdeI	CTNAG	4 cut(s)	1224, 1244, 1494, 1552
DraI	TTTAAA	1 cut(s)	1338
DriI	GACNNNNNGTC	1 cut(s)	584
EaeI	YGGCCR	1 cut(s)	187
Eam1104I	CTCTTC	1 cut(s)	435
Eam1105I	GACNNNNNGTC	1 cut(s)	584
EarI	CTCTTC	1 cut(s)	435
Eco130I	CCWWGG	2 cut(s)	347, 536
Eco24I	GRGCYC	1 cut(s)	86
Eco31I	GGTCTC	1 cut(s)	571
Eco32I	GATATC	1 cut(s)	406
Eco47I	GGWCC	1 cut(s)	1614
Eco57I	CTGAAG	2 cut(s)	324, 1058
Eco88I	CYCGRG	1 cut(s)	176
EcoO109I	RGGNCCY	2 cut(s)	1365, 1614
EcoRII	CCWGG	2 cut(s)	167, 640
EcoRV	GATATC	1 cut(s)	406
EcoT14I	CCWWGG	2 cut(s)	347, 536
EcoT38I	GRGCYC	1 cut(s)	86
ErhI	CCWWGG	2 cut(s)	347, 536
Esp3I	CGTCTC	2 cut(s)	885, 1147
FaeI	CATG	4 cut(s)	853, 915, 968, 1198
FalI	AAGNNNNNCTT	2 cut(s)	1612, 1644
FaqI	GGGAC	4 cut(s)	76, 1261, 1375, 1600
FatI	CATG	4 cut(s)	849, 911, 964, 1194
FauI	CCCGC	2 cut(s)	156, 870
FbaI	TGATCA	1 cut(s)	292
FblI	GTMKAC	1 cut(s)	158
Fnu4HI	GCNGC	8 cut(s)	219, 222, 225, 501, 931, 990, 1256, 1626
FokI	GGATG	5 cut(s)	221, 257, 332, 394, 1581
FriOI	GRGCYC	1 cut(s)	86
Fsp4HI	GCNGC	8 cut(s)	219, 222, 225, 501, 931, 990, 1256, 1626
FspBI	CTAG	5 cut(s)	348, 582, 623, 713, 749
GlaI	GCGC	5 cut(s)	70, 133, 476, 1550, 1688
GluI	GCNGC	8 cut(s)	219, 222, 225, 501, 931, 990, 1256, 1626
HaeII	RGCGCY	2 cut(s)	135, 1690
HaeIII	GGCC	5 cut(s)	33, 167, 189, 653, 1366
HapII	CCGG	4 cut(s)	177, 190, 228, 278
HgaI	GACGC	1 cut(s)	1129
HhaI	GCGC	5 cut(s)	71, 134, 477, 1551, 1689
Hin1II	CATG	4 cut(s)	853, 915, 968, 1198
Hin6I	GCGC	5 cut(s)	69, 132, 475, 1549, 1687
HinP1I	GCGC	5 cut(s)	69, 132, 475, 1549, 1687
HinfI	GANTC	8 cut(s)	50, 64, 123, 527, 936, 961, 1199, 1342
HpaII	CCGG	4 cut(s)	177, 190, 228, 278
HphI	GGTGA	2 cut(s)	352, 1095
Hpy166II	GTNNAC	2 cut(s)	159, 728
Hpy188III	TCNNGA	4 cut(s)	401, 1166, 1226, 1603
Hpy8I	GTNNAC	2 cut(s)	159, 728
HpyAV	CCTTC	6 cut(s)	317, 358, 856, 1011, 1033, 1705
HpyCH4III	ACNGT	5 cut(s)	481, 799, 841, 996, 1136
HpyF10VI	GCNNNNNNNGC	5 cut(s)	77, 218, 224, 930, 1191
HpyF3I	CTNAG	4 cut(s)	1224, 1244, 1494, 1552
Hsp92II	CATG	4 cut(s)	853, 915, 968, 1198
HspAI	GCGC	5 cut(s)	69, 132, 475, 1549, 1687
Ksp22I	TGATCA	1 cut(s)	292
LmnI	GCTCC	3 cut(s)	280, 805, 1020
Lsp1109I	GCAGC	6 cut(s)	205, 487, 917, 1001, 1242, 1612
LweI	GCATC	2 cut(s)	199, 372
MaeI	CTAG	5 cut(s)	348, 582, 623, 713, 749
MaeIII	GTNAC	2 cut(s)	655, 835
MboII	GAAGA	7 cut(s)	452, 1025, 1092, 1181, 1498, 1585, 1635
MfeI	CAATTG	1 cut(s)	448
MhlI	GDGCHC	3 cut(s)	86, 884, 1165
MluCI	AATT	8 cut(s)	448, 752, 953, 1080, 1096, 1332, 1411, 1452
MlyI	GAGTC	4 cut(s)	58, 945, 1208, 1336
MroXI	GAANNNNTTC	3 cut(s)	268, 526, 557
MseI	TTAA	3 cut(s)	1337, 1361, 1409
MspCI	CTTAAG	1 cut(s)	1360
MspI	CCGG	4 cut(s)	177, 190, 228, 278
MspR9I	CCNGG	6 cut(s)	169, 177, 178, 229, 279, 642
MunI	CAATTG	1 cut(s)	448
Mva1269I	GAATGC	1 cut(s)	1057
MvaI	CCWGG	2 cut(s)	169, 642
MvnI	CGCG	3 cut(s)	69, 163, 565
MwoI	GCNNNNNNNGC	5 cut(s)	77, 218, 224, 930, 1191
NciI	CCSGG	4 cut(s)	177, 178, 229, 279
NlaIII	CATG	4 cut(s)	853, 915, 968, 1198
NlaIV	GGNNCC	3 cut(s)	1022, 1367, 1616
NmeAIII	GCCGAG	1 cut(s)	97
NmuCI	GTSAC	1 cut(s)	655
NspV	TTCGAA	1 cut(s)	459
PcsI	WCGNNNNNNNCGW	1 cut(s)	209
PctI	GAATGC	1 cut(s)	1057
PdmI	GAANNNNTTC	3 cut(s)	268, 526, 557
PfeI	GAWTC	4 cut(s)	50, 123, 527, 961
PkrI	GCNGC	8 cut(s)	220, 223, 226, 502, 932, 991, 1257, 1627
PleI	GAGTC	4 cut(s)	58, 944, 1207, 1336
PpsI	GAGTC	4 cut(s)	58, 944, 1207, 1336
PpuMI	RGGWCCY	1 cut(s)	1614
Psp5II	RGGWCCY	1 cut(s)	1614
Psp6I	CCWGG	2 cut(s)	167, 640
PspGI	CCWGG	2 cut(s)	167, 640
PspN4I	GGNNCC	3 cut(s)	1022, 1367, 1616
PspPI	GGNCC	4 cut(s)	31, 165, 1365, 1614
PspPPI	RGGWCCY	1 cut(s)	1614
PstI	CTGCAG	1 cut(s)	935
PstNI	CAGNNNCTG	2 cut(s)	617, 1690
RsaI	GTAC	3 cut(s)	727, 998, 1354
RsaNI	GTAC	3 cut(s)	726, 997, 1353
SaqAI	TTAA	3 cut(s)	1337, 1361, 1409
SatI	GCNGC	8 cut(s)	219, 222, 225, 501, 931, 990, 1256, 1626
Sau96I	GGNCC	4 cut(s)	31, 165, 1365, 1614
SchI	GAGTC	4 cut(s)	58, 945, 1208, 1336
ScrFI	CCNGG	6 cut(s)	169, 177, 178, 229, 279, 642
SduI	GDGCHC	3 cut(s)	86, 884, 1165
SfaNI	GCATC	2 cut(s)	199, 372
SfcI	CTRYAG	2 cut(s)	931, 1135
SfuI	TTCGAA	1 cut(s)	459
SinI	GGWCC	1 cut(s)	1614
SmaI	CCCGGG	1 cut(s)	178
SmlI	CTYRAG	4 cut(s)	1007, 1360, 1519, 1609
SmoI	CTYRAG	4 cut(s)	1007, 1360, 1519, 1609
SpeI	ACTAGT	1 cut(s)	712
Sse9I	AATT	8 cut(s)	448, 752, 953, 1080, 1096, 1332, 1411, 1452
SsiI	CCGC	5 cut(s)	163, 222, 225, 333, 877
SspI	AATATT	1 cut(s)	1118
SspMI	CTAG	5 cut(s)	348, 582, 623, 713, 749
StyD4I	CCNGG	6 cut(s)	167, 175, 176, 227, 277, 640
StyI	CCWWGG	2 cut(s)	347, 536
TaaI	ACNGT	5 cut(s)	481, 799, 841, 996, 1136
TaqI	TCGA	7 cut(s)	94, 408, 459, 545, 588, 1029, 1514
TasI	AATT	8 cut(s)	448, 752, 953, 1080, 1096, 1332, 1411, 1452
TatI	WGTACW	3 cut(s)	725, 996, 1352
TauI	GCSGC	2 cut(s)	224, 227
TfiI	GAWTC	4 cut(s)	50, 123, 527, 961
Tru1I	TTAA	3 cut(s)	1337, 1361, 1409
Tru9I	TTAA	3 cut(s)	1337, 1361, 1409
TscAI	CASTG	5 cut(s)	484, 618, 735, 846, 1667
TseFI	GTSAC	1 cut(s)	655
TseI	GCWGC	6 cut(s)	218, 500, 930, 989, 1255, 1625
Tsp45I	GTSAC	1 cut(s)	655
TspDTI	ATGAA	6 cut(s)	17, 336, 900, 953, 1081, 1254
TspGWI	ACGGA	1 cut(s)	909
TspMI	CCCGGG	1 cut(s)	176
TspRI	CASTG	5 cut(s)	484, 618, 735, 846, 1667
Vha464I	CTTAAG	1 cut(s)	1360
VpaK11BI	GGWCC	1 cut(s)	1614
XapI	RAATTY	2 cut(s)	1332, 1411
XmaI	CCCGGG	1 cut(s)	176
XmaJI	CCTAGG	1 cut(s)	347
XmiI	GTMKAC	1 cut(s)	158
XmnI	GAANNNNTTC	3 cut(s)	268, 526, 557
XspI	CTAG	5 cut(s)	348, 582, 623, 713, 749

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.