Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr12

Orthogroup ID

OG0005267

Physical Location & Seq

Genomic Coordinates Forward (+)

12236877 .. 12240970

Gene Structure 4094 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1509 bp

ATGGAAGATAACACCAAATATCTATCTTCAAAATCAATTCTAATCTCAAGGTCCCCTAGTACTTCTTCAGTGTATTTTTCTTCGCAGAAGAAAAGTCAGTGGAGGATTACAACAAAAGATCAGCGGCTGCATAAGTTGGTTTTCGAGGAAGGTGGATTGCCTGACGGAACAGAAGTAGCATATTATGCACGCGGACAGAAATTGCTAGTTGGTTACAAGAAAGGATTTGGAATATTTTGTTGTTGCTGCAACAGTGAGGTCAGCCCGTCACAGTTTGAGGCCCATGCAGGTTGGGCCACACGCAGGAAACCCTATGCATACATTTACACATCTAATGGAGTGTCTCTCCACGAGTTGGCTATATCTTTGTCAAGAGGTCGGAAATATGCAGCCAAGGATAATGATGACTTGTGCATCATTTGTGCCGATGGTGGGAACCTTGTGCTTTGTGATGGATGCCCTAGGGCCTTCCACAGAGACTGTGCTTCTCTACCAAGTGTTCCTCGTGGTGACTGGTACTGTAAGTTTTGTCAAAATATGTTTCAAAGAGAAAAGTTTGTGGAACATAATGAAAATGCTGTCGCTGCTGGAAGGATTGATGGAATTGATCGATCTATAGAACAGATAACCCAAAGATGCATTCGTATTGTCAAAGACATAGAAGCTGAACTAACTGGATGCGTTTTATGTAGAGGTTATGATTTTAGCAAATCAGGATTTGGTCCACGAACTATTATACTTTGTGATCAGTGTGAGAAGGAATATCATGTTGGCTGTTTGAAGAAACATAAAATGGCAAATTTAAAGGAATTGCCAAAAGGGAAGTGGTTTTGTTGCGCAGACTGCAGTAGAATTCATTCTATTTTGCAAAGGTTGCTGACTAGAGGAGCTGAGAAGCTTCCTGACTCTCATTTGGATGTTATAAAGAAGAAGATGGAGGCAAACGGTTTGGAGACTGTCAGTGGGTTTGATGTGAGATGGAGACTCATTAGTGGCAAAATTGCTTCTCAGGAATGTCGTTTTTTACTTTCAAAGGCTGTTGCTATCTTCCATGATTGTTTTGATCCTATAGTTGATGCAGAATCTGGGCGAGACCTTATTCCCGCCATGGTTTATGGAAGGAATGTTAGGAGCCAAGAATTTGGGAATATGTACTGTGCAATACTGATGGTCAACTCGACTGTGGTATCAGCTGGAATTATACGTGTTTTTGGTCATGAAGTTGCTGAACTTCCTTTGGTTGCCACTAGTAATGGTAACCATGGCAAGGGCTACTTCCAACTATTGTTCTCCTGCATTGAAAAGCTGCTAGCTTTCTTGAATGTGAAAAGTATTGTGCTGCCGGCTGCGGAAGAAGCAGAATCCATATGGACCGATAAATTTGGTTTTACAAAAATGAAGCCGGAGCAGCTCACCACCTACCGAAGAACCTGCTACCAAATGGTGACATTCAAAGGAACGTCCATGCTACATAAAAGGGTTCCCGAGTGCCGGGTTGTAAGCACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000118 GO:0000122 GO:0000228 GO:0000785 GO:0000790 GO:0001085 GO:0001103 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005737 GO:0005813 GO:0005815 GO:0005856 GO:0006355 GO:0006357 GO:0008134 GO:0008150 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0015630 GO:0016043 GO:0016581 GO:0017053 GO:0019219 GO:0019222 GO:0019899 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032991 GO:0032993 GO:0042826 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044430 GO:0044446 GO:0044451 GO:0044454 GO:0044464 GO:0045892 GO:0045934 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050808 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0060255 GO:0065007 GO:0070013 GO:0070491 GO:0070603 GO:0071840 GO:0072553 GO:0080090 GO:0090545 GO:0090568 GO:0099172 GO:1902494 GO:1902679 GO:1903506 GO:1903507 GO:1904949 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Jas PHD

Protein Analysis

503

Amino Acids

56.45

Weight (kDa)

8.83

Isoelectric Point (pI)

37.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TDBD	PF16135	74 - 119	2.6e-13	Tify domain binding domain
PHD-1st_NSD	PF23011	134 - 178	7.6e-08	Histone-lysine N-methyltransferase NSD-like, PHD zinc finger 1
PHD	PF00628	138 - 177	1.1e-07	PHD-finger
IDM1_C	PF23209	354 - 492	1.5e-53	Increased DNA methylation 1, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0005267)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G36720 AT2G36720
fragaria_vesca	FvH4_6g17100 FvH4_6g17100 FvH4_6g17100 FvH4_6g17100 FvH4_6g17100 FvH4_6g17100 FvH4_6g17100
malus_domestica	MD00G1055800.v1.1 MD12G1104000.v1.1
prunus_persica	Prupe.7G123800_v2.0.a1
pyrus_communis	pycom04g08060 pycom12g10230 pycom12g10240 pycom12g10250
rosa_chinensis	RchiOBHm_Chr3g0471181
rosa_laevigata	RLG00000024200
rosa_multiflora	Rmu_sc0007633.1_g000026 Rmu_sc0010073.1_g000013
rosa_roxburghii	Rroxscaffold_6G00410250
rosa_rugosa	Rorug03G0115800
rosa_samantha	Rh3AG164800 Rh3BG190400 Rh3CG180700 Rh3DG185600
rosa_wichuraiana	Rw3G015550 Rw7G027560 Rw7G029700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	923
Acc16I	TGCGCA	1 cut(s)	838
Acc36I	ACCTGC	2 cut(s)	278, 1439
AccB7I	CCANNNNNTGG	1 cut(s)	355
AccII	CGCG	1 cut(s)	192
AciI	CCGC	4 cut(s)	124, 192, 1104, 1349
AclWI	GGATC	1 cut(s)	1058
AcsI	RAATTY	4 cut(s)	799, 852, 1139, 1379
AcuI	CTGAAG	1 cut(s)	51
AfaI	GTAC	3 cut(s)	61, 518, 1154
AfiI	CCNNNNNNNGG	5 cut(s)	303, 355, 432, 1267, 1491
AflIII	ACRYGT	1 cut(s)	1204
AgsI	TTSAA	7 cut(s)	30, 545, 781, 1032, 1301, 1321, 1453
AhlI	ACTAGT	1 cut(s)	1247
AjuI	GAANNNNNNNTTGG	4 cut(s)	624, 656, 753, 785
AluBI	AGCT	7 cut(s)	665, 890, 898, 1193, 1306, 1313, 1411
AluI	AGCT	7 cut(s)	665, 890, 898, 1193, 1306, 1313, 1411
Alw26I	GTCTC	5 cut(s)	348, 471, 947, 976, 1086
AlwI	GGATC	1 cut(s)	1058
AlwNI	CAGNNNCTG	3 cut(s)	127, 480, 1085
Ama87I	CYCGRG	1 cut(s)	1484
AoxI	GGCC	3 cut(s)	279, 294, 465
ApeKI	GCWGC	8 cut(s)	127, 246, 389, 584, 1306, 1339, 1346, 1408
ApoI	RAATTY	4 cut(s)	799, 852, 1139, 1379
Asp700I	GAANNNNTTC	1 cut(s)	856
AspA2I	CCTAGG	1 cut(s)	461
AspLEI	GCGC	1 cut(s)	839
AspS9I	GGNCC	6 cut(s)	51, 280, 294, 465, 722, 1371
AsuC2I	CCSGG	1 cut(s)	1493
AsuHPI	GGTGA	3 cut(s)	521, 1405, 1456
AsuNHI	GCTAGC	1 cut(s)	1309
AvaI	CYCGRG	1 cut(s)	1484
AvaII	GGWCC	3 cut(s)	51, 722, 1371
AvrII	CCTAGG	1 cut(s)	461
BaeI	ACNNNNGTAYC	2 cut(s)	1170, 1203
BauI	CACGAG	2 cut(s)	350, 504
BbvI	GCAGC	8 cut(s)	114, 233, 401, 571, 1293, 1326, 1333, 1420
BccI	CCATC	6 cut(s)	422, 446, 593, 928, 972, 1162
BcgI	CGANNNNNNTGC	2 cut(s)	1413, 1447
BclI	TGATCA	1 cut(s)	745
BcnI	CCSGG	1 cut(s)	1493
BcoDI	GTCTC	5 cut(s)	348, 471, 947, 976, 1086
BcuI	ACTAGT	1 cut(s)	1247
BfaI	CTAG	6 cut(s)	57, 206, 462, 882, 1248, 1310
BfmI	CTRYAG	3 cut(s)	615, 844, 1068
BfuAI	ACCTGC	2 cut(s)	278, 1439
BisI	GCNGC	9 cut(s)	125, 128, 247, 390, 585, 1307, 1340, 1347, 1409
BlnI	CCTAGG	1 cut(s)	461
BlsI	GCNGC	9 cut(s)	126, 129, 248, 391, 586, 1308, 1341, 1348, 1410
BmcAI	AGTACT	1 cut(s)	61
Bme1390I	CCNGG	1 cut(s)	1493
Bme18I	GGWCC	3 cut(s)	51, 722, 1371
BmeT110I	CYCGRG	1 cut(s)	1484
BmgT120I	GGNCC	6 cut(s)	51, 280, 294, 465, 722, 1371
BmiI	GGNNCC	4 cut(s)	53, 437, 1133, 1482
BmrFI	CCNGG	1 cut(s)	1493
BmsI	GCATC	5 cut(s)	423, 446, 626, 668, 1066
BmtI	GCTAGC	1 cut(s)	1313
BplI	GAGNNNNNCTC	2 cut(s)	330, 362
BpuEI	CTTGAG	1 cut(s)	31
BpuMI	CCSGG	1 cut(s)	1493
Bsa29I	ATCGAT	1 cut(s)	610
BsaAI	YACGTR	1 cut(s)	1205
BsaI	GGTCTC	1 cut(s)	1086
BsaJI	CCNNGG	4 cut(s)	393, 461, 1107, 1261
Bsc4I	CCNNNNNNNGG	5 cut(s)	303, 355, 432, 1267, 1491
Bse118I	RCCGGY	1 cut(s)	1342
Bse1I	ACTGG	2 cut(s)	518, 679
BseCI	ATCGAT	1 cut(s)	610
BseDI	CCNNGG	4 cut(s)	393, 461, 1107, 1261
BseGI	GGATG	3 cut(s)	461, 683, 922
BseLI	CCNNNNNNNGG	5 cut(s)	303, 355, 432, 1267, 1491
BseMII	CTCAG	2 cut(s)	882, 1022
BseNI	ACTGG	2 cut(s)	518, 679
BseRI	GAGGAG	1 cut(s)	900
BseXI	GCAGC	8 cut(s)	114, 233, 401, 571, 1293, 1326, 1333, 1420
Bsh1236I	CGCG	1 cut(s)	192
BshFI	GGCC	3 cut(s)	281, 296, 467
BshVI	ATCGAT	1 cut(s)	610
BsiHKCI	CYCGRG	1 cut(s)	1484
BsiSI	CCGG	3 cut(s)	1343, 1403, 1492
BslFI	GGGAC	1 cut(s)	37
BslI	CCNNNNNNNGG	5 cut(s)	303, 355, 432, 1267, 1491
BsmAI	GTCTC	5 cut(s)	348, 471, 947, 976, 1086
BsmFI	GGGAC	1 cut(s)	37
BsmI	GAATGC	1 cut(s)	639
BsnI	GGCC	3 cut(s)	281, 296, 467
Bso31I	GGTCTC	1 cut(s)	1086
BsoBI	CYCGRG	1 cut(s)	1484
Bsp143I	GATC	5 cut(s)	118, 607, 611, 745, 1063
Bsp19I	CCATGG	2 cut(s)	1107, 1261
BspACI	CCGC	4 cut(s)	124, 192, 1104, 1349
BspANI	GGCC	3 cut(s)	281, 296, 467
BspCNI	CTCAG	2 cut(s)	883, 1021
BspDI	ATCGAT	1 cut(s)	610
BspFNI	CGCG	1 cut(s)	192
BspHI	TCATGA	1 cut(s)	1216
BspLI	GGNNCC	4 cut(s)	53, 437, 1133, 1482
BspMAI	CTGCAG	1 cut(s)	848
BspMI	ACCTGC	2 cut(s)	278, 1439
BspOI	GCTAGC	1 cut(s)	1313
BspPI	GGATC	1 cut(s)	1058
BspTNI	GGTCTC	1 cut(s)	1086
BsrFI	RCCGGY	1 cut(s)	1342
BsrI	ACTGG	2 cut(s)	518, 679
BssAI	RCCGGY	1 cut(s)	1342
BssECI	CCNNGG	4 cut(s)	393, 461, 1107, 1261
BssMI	GATC	5 cut(s)	118, 607, 611, 745, 1063
BssSI	CACGAG	2 cut(s)	350, 504
BssT1I	CCWWGG	4 cut(s)	393, 461, 1107, 1261
Bst2BI	CACGAG	2 cut(s)	350, 504
Bst4CI	ACNGT	8 cut(s)	254, 273, 482, 521, 947, 958, 1157, 1183
BstAPI	GCANNNNNTGC	2 cut(s)	185, 874
BstBAI	YACGTR	1 cut(s)	1205
BstC8I	GCNNGC	3 cut(s)	190, 1311, 1344
BstDEI	CTNAG	2 cut(s)	891, 1008
BstDSI	CCRYGG	2 cut(s)	1107, 1261
BstEII	GGTNACC	1 cut(s)	1256
BstF5I	GGATG	3 cut(s)	461, 683, 922
BstFNI	CGCG	1 cut(s)	192
BstHHI	GCGC	1 cut(s)	839
BstKTI	GATC	5 cut(s)	121, 610, 614, 748, 1066
BstMAI	GTCTC	5 cut(s)	348, 471, 947, 976, 1086
BstMBI	GATC	5 cut(s)	118, 607, 611, 745, 1063
BstMWI	GCNNNNNNNGC	7 cut(s)	185, 293, 584, 843, 874, 1355, 1408
BstPI	GGTNACC	1 cut(s)	1256
BstSCI	CCNGG	1 cut(s)	1491
BstSFI	CTRYAG	3 cut(s)	615, 844, 1068
BstUI	CGCG	1 cut(s)	192
BstV1I	GCAGC	8 cut(s)	114, 233, 401, 571, 1293, 1326, 1333, 1420
BstXI	CCANNNNNNTGG	1 cut(s)	1142
Bsu15I	ATCGAT	1 cut(s)	610
BsuRI	GGCC	3 cut(s)	281, 296, 467
BsuTUI	ATCGAT	1 cut(s)	610
BtgI	CCRYGG	2 cut(s)	1107, 1261
BtsCI	GGATG	3 cut(s)	461, 683, 922
BtsIMutI	CAGTG	5 cut(s)	75, 104, 259, 755, 967
BveI	ACCTGC	2 cut(s)	278, 1439
Cac8I	GCNNGC	3 cut(s)	190, 1311, 1344
CaiI	CAGNNNCTG	3 cut(s)	127, 480, 1085
CciI	TCATGA	1 cut(s)	1216
CfoI	GCGC	1 cut(s)	839
Cfr10I	RCCGGY	1 cut(s)	1342
Cfr13I	GGNCC	6 cut(s)	51, 280, 294, 465, 722, 1371
ClaI	ATCGAT	1 cut(s)	610
Csp6I	GTAC	3 cut(s)	60, 517, 1153
CviAII	CATG	8 cut(s)	284, 767, 1052, 1108, 1217, 1262, 1465, 1506
CviQI	GTAC	3 cut(s)	60, 517, 1153
DdeI	CTNAG	2 cut(s)	891, 1008
DpnI	GATC	5 cut(s)	120, 609, 613, 747, 1065
DpnII	GATC	5 cut(s)	118, 607, 611, 745, 1063
DraI	TTTAAA	1 cut(s)	804
Eco130I	CCWWGG	4 cut(s)	393, 461, 1107, 1261
Eco31I	GGTCTC	1 cut(s)	1086
Eco47I	GGWCC	3 cut(s)	51, 722, 1371
Eco57I	CTGAAG	1 cut(s)	51
Eco88I	CYCGRG	1 cut(s)	1484
Eco91I	GGTNACC	1 cut(s)	1256
EcoO109I	RGGNCCY	2 cut(s)	51, 465
EcoO65I	GGTNACC	1 cut(s)	1256
EcoRI	GAATTC	1 cut(s)	852
EcoT14I	CCWWGG	4 cut(s)	393, 461, 1107, 1261
EcoT22I	ATGCAT	2 cut(s)	319, 641
ErhI	CCWWGG	4 cut(s)	393, 461, 1107, 1261
FaeI	CATG	8 cut(s)	287, 770, 1055, 1111, 1220, 1265, 1468, 1509
FalI	AAGNNNNNCTT	2 cut(s)	1259, 1291
FaqI	GGGAC	1 cut(s)	37
FatI	CATG	8 cut(s)	283, 766, 1051, 1107, 1216, 1261, 1464, 1505
FauI	CCCGC	1 cut(s)	1111
FauNDI	CATATG	1 cut(s)	1367
FbaI	TGATCA	1 cut(s)	745
Fnu4HI	GCNGC	9 cut(s)	125, 128, 247, 390, 585, 1307, 1340, 1347, 1409
FokI	GGATG	3 cut(s)	468, 690, 929
Fsp4HI	GCNGC	9 cut(s)	125, 128, 247, 390, 585, 1307, 1340, 1347, 1409
FspBI	CTAG	6 cut(s)	57, 206, 462, 882, 1248, 1310
FspI	TGCGCA	1 cut(s)	838
GlaI	GCGC	1 cut(s)	838
GluI	GCNGC	9 cut(s)	125, 128, 247, 390, 585, 1307, 1340, 1347, 1409
HaeIII	GGCC	3 cut(s)	281, 296, 467
HapII	CCGG	3 cut(s)	1343, 1403, 1492
HhaI	GCGC	1 cut(s)	839
Hin1II	CATG	8 cut(s)	287, 770, 1055, 1111, 1220, 1265, 1468, 1509
Hin6I	GCGC	1 cut(s)	837
HinP1I	GCGC	1 cut(s)	837
HincII	GTYRAC	1 cut(s)	1174
HindII	GTYRAC	1 cut(s)	1174
HindIII	AAGCTT	1 cut(s)	896
HinfI	GANTC	4 cut(s)	905, 984, 1082, 1361
HpaII	CCGG	3 cut(s)	1343, 1403, 1492
HphI	GGTGA	3 cut(s)	521, 1405, 1456
Hpy166II	GTNNAC	2 cut(s)	725, 1174
Hpy188I	TCNGA	1 cut(s)	381
Hpy188III	TCNNGA	7 cut(s)	372, 714, 902, 1010, 1217, 1318, 1484
Hpy8I	GTNNAC	2 cut(s)	725, 1174
HpyAV	CCTTC	5 cut(s)	143, 478, 585, 751, 1113
HpyCH4III	ACNGT	8 cut(s)	254, 273, 482, 521, 947, 958, 1157, 1183
HpyCH4IV	ACGT	2 cut(s)	1204, 1460
HpyF10VI	GCNNNNNNNGC	7 cut(s)	185, 293, 584, 843, 874, 1355, 1408
HpyF3I	CTNAG	2 cut(s)	891, 1008
HpySE526I	ACGT	2 cut(s)	1204, 1460
Hsp92II	CATG	8 cut(s)	287, 770, 1055, 1111, 1220, 1265, 1468, 1509
HspAI	GCGC	1 cut(s)	837
KroI	GCCGGC	1 cut(s)	1342
KroNI	GCCGGC	1 cut(s)	1344
Ksp22I	TGATCA	1 cut(s)	745
Kzo9I	GATC	5 cut(s)	118, 607, 611, 745, 1063
LmnI	GCTCC	3 cut(s)	887, 1131, 1405
Lsp1109I	GCAGC	8 cut(s)	114, 233, 401, 571, 1293, 1326, 1333, 1420
LweI	GCATC	5 cut(s)	423, 446, 626, 668, 1066
MaeI	CTAG	6 cut(s)	57, 206, 462, 882, 1248, 1310
MaeII	ACGT	2 cut(s)	1204, 1460
MaeIII	GTNAC	5 cut(s)	212, 267, 509, 1256, 1444
MalI	GATC	5 cut(s)	120, 609, 613, 747, 1065
MboI	GATC	5 cut(s)	118, 607, 611, 745, 1063
MlyI	GAGTC	2 cut(s)	899, 978
MmeI	TCCRAC	2 cut(s)	359, 1303
MnlI	CCTC	9 cut(s)	96, 139, 250, 271, 368, 513, 686, 878, 931
Mph1103I	ATGCAT	2 cut(s)	319, 641
MroNI	GCCGGC	1 cut(s)	1342
MroXI	GAANNNNTTC	1 cut(s)	856
MseI	TTAA	1 cut(s)	803
MslI	CAYNNNNRTG	1 cut(s)	915
MspA1I	CMGCKG	2 cut(s)	124, 1193
MspI	CCGG	3 cut(s)	1343, 1403, 1492
MspR9I	CCNGG	1 cut(s)	1493
Mva1269I	GAATGC	1 cut(s)	639
MvnI	CGCG	1 cut(s)	192
MwoI	GCNNNNNNNGC	7 cut(s)	185, 293, 584, 843, 874, 1355, 1408
NaeI	GCCGGC	1 cut(s)	1344
NciI	CCSGG	1 cut(s)	1493
NcoI	CCATGG	2 cut(s)	1107, 1261
NdeI	CATATG	1 cut(s)	1367
NdeII	GATC	5 cut(s)	118, 607, 611, 745, 1063
NgoMIV	GCCGGC	1 cut(s)	1342
NheI	GCTAGC	1 cut(s)	1309
NlaIII	CATG	8 cut(s)	287, 770, 1055, 1111, 1220, 1265, 1468, 1509
NlaIV	GGNNCC	4 cut(s)	53, 437, 1133, 1482
NmuCI	GTSAC	3 cut(s)	267, 509, 1444
NsbI	TGCGCA	1 cut(s)	838
NsiI	ATGCAT	2 cut(s)	319, 641
PagI	TCATGA	1 cut(s)	1216
PctI	GAATGC	1 cut(s)	639
PdiI	GCCGGC	1 cut(s)	1344
PdmI	GAANNNNTTC	1 cut(s)	856
PfeI	GAWTC	2 cut(s)	1082, 1361
PflMI	CCANNNNNTGG	1 cut(s)	355
PkrI	GCNGC	9 cut(s)	126, 129, 248, 391, 586, 1308, 1341, 1348, 1410
PleI	GAGTC	2 cut(s)	899, 978
PpsI	GAGTC	2 cut(s)	899, 978
Ppu21I	YACGTR	1 cut(s)	1205
PpuMI	RGGWCCY	1 cut(s)	51
PsiI	TTATAA	1 cut(s)	923
Psp5II	RGGWCCY	1 cut(s)	51
PspEI	GGTNACC	1 cut(s)	1256
PspN4I	GGNNCC	4 cut(s)	53, 437, 1133, 1482
PspPI	GGNCC	6 cut(s)	51, 280, 294, 465, 722, 1371
PspPPI	RGGWCCY	1 cut(s)	51
PstI	CTGCAG	1 cut(s)	848
PstNI	CAGNNNCTG	3 cut(s)	127, 480, 1085
PvuII	CAGCTG	1 cut(s)	1193
RsaI	GTAC	3 cut(s)	61, 518, 1154
RsaNI	GTAC	3 cut(s)	60, 517, 1153
RseI	CAYNNNNRTG	1 cut(s)	915
SaqAI	TTAA	1 cut(s)	803
SatI	GCNGC	9 cut(s)	125, 128, 247, 390, 585, 1307, 1340, 1347, 1409
Sau3AI	GATC	5 cut(s)	118, 607, 611, 745, 1063
Sau96I	GGNCC	6 cut(s)	51, 280, 294, 465, 722, 1371
ScaI	AGTACT	1 cut(s)	61
SchI	GAGTC	2 cut(s)	899, 978
ScrFI	CCNGG	1 cut(s)	1493
SfaNI	GCATC	5 cut(s)	423, 446, 626, 668, 1066
SfcI	CTRYAG	3 cut(s)	615, 844, 1068
SinI	GGWCC	3 cut(s)	51, 722, 1371
SmiMI	CAYNNNNRTG	1 cut(s)	915
SmlI	CTYRAG	1 cut(s)	46
SmoI	CTYRAG	1 cut(s)	46
SpeI	ACTAGT	1 cut(s)	1247
SsiI	CCGC	4 cut(s)	124, 192, 1104, 1349
SspI	AATATT	1 cut(s)	234
SspMI	CTAG	6 cut(s)	57, 206, 462, 882, 1248, 1310
StyD4I	CCNGG	1 cut(s)	1491
StyI	CCWWGG	4 cut(s)	393, 461, 1107, 1261
TaaI	ACNGT	8 cut(s)	254, 273, 482, 521, 947, 958, 1157, 1183
TaiI	ACGT	2 cut(s)	1207, 1463
TaqI	TCGA	3 cut(s)	144, 610, 1178
TaqII	GACCGA	1 cut(s)	1388
TatI	WGTACW	2 cut(s)	59, 1152
TauI	GCSGC	1 cut(s)	127
TfiI	GAWTC	2 cut(s)	1082, 1361
Tru1I	TTAA	1 cut(s)	803
Tru9I	TTAA	1 cut(s)	803
TscAI	CASTG	5 cut(s)	75, 104, 259, 755, 967
TseFI	GTSAC	3 cut(s)	267, 509, 1444
TseI	GCWGC	8 cut(s)	127, 246, 389, 584, 1306, 1339, 1346, 1408
Tsp45I	GTSAC	3 cut(s)	267, 509, 1444
TspDTI	ATGAA	4 cut(s)	585, 845, 1233, 1412
TspGWI	ACGGA	1 cut(s)	180
TspRI	CASTG	5 cut(s)	75, 104, 259, 755, 967
Van91I	CCANNNNNTGG	1 cut(s)	355
VpaK11BI	GGWCC	3 cut(s)	51, 722, 1371
XapI	RAATTY	4 cut(s)	799, 852, 1139, 1379
XcmI	CCANNNNNNNNNTGG	1 cut(s)	822
XmaJI	CCTAGG	1 cut(s)	461
XmnI	GAANNNNTTC	1 cut(s)	856
XspI	CTAG	6 cut(s)	57, 206, 462, 882, 1248, 1310
ZrmI	AGTACT	1 cut(s)	61
Zsp2I	ATGCAT	2 cut(s)	319, 641

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.