pycom12g12850

ankyrin repeat-containing protein At5g02620-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
Physical Location & Seq
Reverse (-)
15312707 .. 15314686
1980 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom12g12850.2

Sequence Viewer

Length: 1500 bp
ATGGCAGCTCCAGTGAGGCAGCAAAGCTTTGTTGGGAAGAAGATGACTAAGCAGTTGACGGGAAAGCGCGAAGACGGGCCCTTGCATTTGGCAGCAAGAGAAGGAGATTTGGGATTGGTTGTAGAAATCTTGTCTAACTGTGGGGAGGCAGAGCTGAATGAACTTTTGTCGAAACAGAATCACATGGGGGAAACCGCCTTGTATCTGGCGGCTGATTGTGGATATGTTGATTTGGTTAAGGAAATGATGAAGTACTATGATGTTGGTTCAGCTGGTATCAAAGCTCGAAATGGCTGTGATGCATTTCACATTGCTTCCAAGCAAGGGCACTTGGAGGTACTGAAGGTCCTCATGGAGGCGATTCCAGAACTTTCAATGACCGTTGATCGCACAAACACCACAGCATTGCACATCGCTGCAGCACAGGGACACACAGAAGTAGTAAGTTTTCTTTTGGAGACTGGTTGCAGTTTGGTGGCCATTGCAAGAAGCAATGGGAAAACTGCCTTGCATTCTGCAGCAAGGAAAGGGCATTTGGAGGTGATCCAGGCCCTCTTGAGCAAAGATACCGGAATTGCATTAAGAAGAGATAATAAGGGCCAGACAGCTCTCCATATGGCAGTTAAGGGACAGAATGTCGAATTGGTGGGTGAGCTAGCGAAGGCAGATCCTTCGTTGATAAACGTGGTAGATAACAAGGGAAACACTGCCTTGCACGTGGCAACAGGGAAGGGTCACGCTCAGATTGTTCGAACGCTGTTAAGTCATAAGGGAGTGGCGAAAACCATCATTAACAGATCTGGAGAATCTGTTTTTGACACTGCTGAGAAATCTGGGCACACAAAGATTGCTACCATTCTGGCAGAGCATGGGATTCAAAGTGCCAAATCCATGAAGCCGCCAACTATGAACCCAAATCGAGAACTCAAACAAACTGTAAGCGAAATAAAACATGAGGTGCATGATCAGCTTAAGCAAACGAGACAAACACGAAAGCAAGTGCATGGAATGGTAAAGCAGCTCAGTAAAATGCATTTGGATGGGCTTAACAATGCAATAAACTCCACCACAGTTGTGGCTGTACTCATTGCCACTGTCGCCTTTGCTGCAATCTTCACTGTCCCGGGCCAATACCCTGACCCCAAGAAACCTCTTCCTGGTGGATTCTCTCCTGGAGAAGCAAACATTGGCCCCAAACCTGAGTTCGTAGTCTTCTTCATCTTTGACTCTTTTGCTCTCTTCATATCGTTGGCTGTTGTGGTGGTTCAAACTTCTATTGTTGTCGTAGAGAGGGAGGCAAAAGAGAAGATGATGTCAGTCATAAACAAGCTCATGTGGATGGCTTGTGTGATGATTTCGGTTTCATTTCTTGCACTGTCATATATAATTGTTGGAAAAGAAGAGAAATGGCTGGCTATTGGAGTGACAGCTATAGGGACAGTGATCGATGGGAATGACATTTGGAACAATGTGTTATTGGATGGTTGTGCAGCACGTTGA
Functional Annotation

Protein Analysis

500

Amino Acids

53.81

Weight (kDa)

8.81

Isoelectric Point (pI)

28.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 69
AciI CCGC 3 cut(s) 195, 209, 899
AclWI GGATC 2 cut(s) 538, 662
AcoI YGGCCR 1 cut(s) 477
AcuI CTGAAG 1 cut(s) 362
AcvI CACGTG 1 cut(s) 718
AfaI GTAC 3 cut(s) 254, 339, 1083
AfiI CCNNNNNNNGG 3 cut(s) 324, 355, 1157
AflII CTTAAG 1 cut(s) 971
AgsI TTSAA 3 cut(s) 375, 878, 1268
AhdI GACNNNNNGTC 1 cut(s) 635
AjnI CCWGG 3 cut(s) 546, 1156, 1171
AjuI GAANNNNNNNTTGG 8 cut(s) 518, 550, 626, 658, 1170, 1187, 1202, 1219
AleI CACNNNNGTG 1 cut(s) 1073
Alw26I GTCTC 2 cut(s) 452, 976
AlwI GGATC 2 cut(s) 538, 662
Ama87I CYCGRG 1 cut(s) 1123
AoxI GGCC 6 cut(s) 77, 477, 549, 598, 1126, 1189
ApaI GGGCCC 1 cut(s) 81
ApeKI GCWGC 9 cut(s) 5, 19, 92, 416, 419, 518, 1018, 1106, 1490
AspLEI GCGC 1 cut(s) 69
AspS9I GGNCC 7 cut(s) 77, 78, 346, 550, 598, 1126, 1190
AsuC2I CCSGG 2 cut(s) 1124, 1125
AsuHPI GGTGA 2 cut(s) 553, 662
AsuII TTCGAA 1 cut(s) 751
AsuNHI GCTAGC 1 cut(s) 655
AvaI CYCGRG 1 cut(s) 1123
AvaII GGWCC 1 cut(s) 346
BaeGI GKGCMC 3 cut(s) 81, 330, 840
BalI TGGCCA 1 cut(s) 479
BanII GRGCYC 1 cut(s) 81
BbrPI CACGTG 1 cut(s) 718
BbsI GAAGAC 2 cut(s) 78, 1204
BbvI GCAGC 8 cut(s) 17, 31, 104, 403, 431, 530, 1030, 1093
BccI CCATC 5 cut(s) 794, 1034, 1333, 1442, 1475
BcgI CGANNNNNNTGC 2 cut(s) 654, 688
BciT130I CCWGG 3 cut(s) 548, 1158, 1173
BclI TGATCA 1 cut(s) 964
BcnI CCSGG 2 cut(s) 1124, 1125
BcoDI GTCTC 2 cut(s) 452, 976
BfaI CTAG 1 cut(s) 656
BfmI CTRYAG 3 cut(s) 417, 516, 1431
BfrI CTTAAG 1 cut(s) 971
BglII AGATCT 1 cut(s) 797
BmcAI AGTACT 1 cut(s) 254
Bme1390I CCNGG 5 cut(s) 548, 1124, 1125, 1158, 1173
Bme18I GGWCC 1 cut(s) 346
BmeRI GACNNNNNGTC 1 cut(s) 635
BmeT110I CYCGRG 1 cut(s) 1123
BmgT120I GGNCC 7 cut(s) 77, 78, 346, 550, 598, 1126, 1190
BmiI GGNNCC 2 cut(s) 79, 1192
BmrFI CCNGG 5 cut(s) 548, 1124, 1125, 1158, 1173
BmsI GCATC 1 cut(s) 289
BmtI GCTAGC 1 cut(s) 659
BpiI GAAGAC 2 cut(s) 78, 1204
BpmI CTGGAG 2 cut(s) 822, 1194
Bpu14I TTCGAA 1 cut(s) 751
BpuEI CTTGAG 1 cut(s) 577
BpuMI CCSGG 2 cut(s) 1124, 1125
Bsa29I ATCGAT 1 cut(s) 1446
BsaAI YACGTR 1 cut(s) 718
BsaJI CCNNGG 1 cut(s) 1123
BsaWI WCCGGW 1 cut(s) 569
BsaXI ACNNNNNCTCC 2 cut(s) 795, 825
Bsc4I CCNNNNNNNGG 3 cut(s) 324, 355, 1157
Bse1I ACTGG 2 cut(s) 11, 466
Bse3DI GCAATG 5 cut(s) 309, 404, 480, 499, 1086
BseBI CCWGG 3 cut(s) 548, 1158, 1173
BseCI ATCGAT 1 cut(s) 1446
BseDI CCNNGG 1 cut(s) 1123
BseGI GGATG 3 cut(s) 1045, 1344, 1486
BseLI CCNNNNNNNGG 3 cut(s) 324, 355, 1157
BseMI GCAATG 5 cut(s) 309, 404, 480, 499, 1086
BseMII CTCAG 4 cut(s) 755, 816, 1036, 1191
BseNI ACTGG 2 cut(s) 11, 466
BseSI GKGCMC 3 cut(s) 81, 330, 840
BseXI GCAGC 8 cut(s) 17, 31, 104, 403, 431, 530, 1030, 1093
Bsh1236I CGCG 1 cut(s) 69
BshFI GGCC 6 cut(s) 79, 479, 551, 600, 1128, 1191
BshVI ATCGAT 1 cut(s) 1446
BsiHKCI CYCGRG 1 cut(s) 1123
BsiSI CCGG 2 cut(s) 570, 1124
BslFI GGGAC 4 cut(s) 441, 642, 1106, 1450
BslI CCNNNNNNNGG 3 cut(s) 324, 355, 1157
BsmAI GTCTC 2 cut(s) 452, 976
BsmFI GGGAC 4 cut(s) 441, 642, 1106, 1450
BsmI GAATGC 1 cut(s) 511
BsnI GGCC 6 cut(s) 79, 479, 551, 600, 1128, 1191
BsoBI CYCGRG 1 cut(s) 1123
Bsp119I TTCGAA 1 cut(s) 751
Bsp120I GGGCCC 1 cut(s) 77
Bsp1286I GDGCHC 3 cut(s) 81, 330, 840
Bsp143I GATC 6 cut(s) 385, 543, 667, 797, 964, 1443
BspACI CCGC 3 cut(s) 195, 209, 899
BspANI GGCC 6 cut(s) 79, 479, 551, 600, 1128, 1191
BspCNI CTCAG 4 cut(s) 754, 817, 1035, 1192
BspDI ATCGAT 1 cut(s) 1446
BspFNI CGCG 1 cut(s) 69
BspLI GGNNCC 2 cut(s) 79, 1192
BspMAI CTGCAG 2 cut(s) 421, 520
BspOI GCTAGC 1 cut(s) 659
BspPI GGATC 2 cut(s) 538, 662
BspT104I TTCGAA 1 cut(s) 751
BspTI CTTAAG 1 cut(s) 971
BsrDI GCAATG 5 cut(s) 309, 404, 480, 499, 1086
BsrI ACTGG 2 cut(s) 11, 466
BssECI CCNNGG 1 cut(s) 1123
BssMI GATC 6 cut(s) 385, 543, 667, 797, 964, 1443
Bst2UI CCWGG 3 cut(s) 548, 1158, 1173
Bst4CI ACNGT 8 cut(s) 140, 382, 937, 1072, 1096, 1120, 1377, 1441
Bst6I CTCTTC 4 cut(s) 580, 1158, 1244, 1395
BstAFI CTTAAG 1 cut(s) 971
BstBAI YACGTR 1 cut(s) 718
BstBI TTCGAA 1 cut(s) 751
BstC8I GCNNGC 2 cut(s) 657, 1413
BstDEI CTNAG 5 cut(s) 48, 741, 825, 1022, 1200
BstENI CCTNNNNNAGG 1 cut(s) 353
BstF5I GGATG 3 cut(s) 1045, 1344, 1486
BstFNI CGCG 1 cut(s) 69
BstHHI GCGC 1 cut(s) 69
BstKTI GATC 6 cut(s) 388, 546, 670, 800, 967, 1446
BstMAI GTCTC 2 cut(s) 452, 976
BstMBI GATC 6 cut(s) 385, 543, 667, 797, 964, 1443
BstMWI GCNNNNNNNGC 3 cut(s) 967, 1097, 1106
BstNI CCWGG 3 cut(s) 548, 1158, 1173
BstSCI CCNGG 5 cut(s) 546, 1122, 1123, 1156, 1171
BstSFI CTRYAG 3 cut(s) 417, 516, 1431
BstSLI GKGCMC 3 cut(s) 81, 330, 840
BstUI CGCG 1 cut(s) 69
BstV1I GCAGC 8 cut(s) 17, 31, 104, 403, 431, 530, 1030, 1093
BstV2I GAAGAC 2 cut(s) 78, 1204
BstX2I RGATCY 2 cut(s) 667, 797
BstXI CCANNNNNNTGG 1 cut(s) 1075
BstYI RGATCY 2 cut(s) 667, 797
Bsu15I ATCGAT 1 cut(s) 1446
BsuRI GGCC 6 cut(s) 79, 479, 551, 600, 1128, 1191
BsuTUI ATCGAT 1 cut(s) 1446
BtgZI GCGATG 1 cut(s) 397
BtsCI GGATG 3 cut(s) 1045, 1344, 1486
BtsI GCAGTG 2 cut(s) 705, 819
BtsIMutI CAGTG 7 cut(s) 18, 705, 819, 1092, 1116, 1373, 1446
Cac8I GCNNGC 2 cut(s) 657, 1413
CfoI GCGC 1 cut(s) 69
Cfr13I GGNCC 7 cut(s) 77, 78, 346, 550, 598, 1126, 1190
Cfr9I CCCGGG 1 cut(s) 1123
ClaI ATCGAT 1 cut(s) 1446
Csp6I GTAC 3 cut(s) 253, 338, 1082
CspCI CAANNNNNGTGG 2 cut(s) 1054, 1089
CviAII CATG 8 cut(s) 184, 352, 869, 892, 953, 962, 1004, 1333
CviQI GTAC 3 cut(s) 253, 338, 1082
DdeI CTNAG 5 cut(s) 48, 741, 825, 1022, 1200
DpnI GATC 6 cut(s) 387, 545, 669, 799, 966, 1445
DpnII GATC 6 cut(s) 385, 543, 667, 797, 964, 1443
DriI GACNNNNNGTC 1 cut(s) 635
EaeI YGGCCR 1 cut(s) 477
Eam1104I CTCTTC 4 cut(s) 580, 1158, 1244, 1395
Eam1105I GACNNNNNGTC 1 cut(s) 635
EarI CTCTTC 4 cut(s) 580, 1158, 1244, 1395
Eco24I GRGCYC 1 cut(s) 81
Eco47I GGWCC 1 cut(s) 346
Eco57I CTGAAG 1 cut(s) 362
Eco72I CACGTG 1 cut(s) 718
Eco88I CYCGRG 1 cut(s) 1123
EcoNI CCTNNNNNAGG 1 cut(s) 353
EcoO109I RGGNCCY 3 cut(s) 78, 346, 550
EcoRII CCWGG 3 cut(s) 546, 1156, 1171
EcoT22I ATGCAT 2 cut(s) 304, 1035
EcoT38I GRGCYC 1 cut(s) 81
FaeI CATG 8 cut(s) 187, 355, 872, 895, 956, 965, 1007, 1336
FaqI GGGAC 4 cut(s) 441, 642, 1106, 1450
FatI CATG 8 cut(s) 183, 351, 868, 891, 952, 961, 1003, 1332
FauNDI CATATG 1 cut(s) 615
FbaI TGATCA 1 cut(s) 964
FokI GGATG 3 cut(s) 1052, 1351, 1493
FriOI GRGCYC 1 cut(s) 81
FspBI CTAG 1 cut(s) 656
GlaI GCGC 1 cut(s) 68
GsuI CTGGAG 2 cut(s) 822, 1194
HaeIII GGCC 6 cut(s) 79, 479, 551, 600, 1128, 1191
HapII CCGG 2 cut(s) 570, 1124
HhaI GCGC 1 cut(s) 69
Hin1II CATG 8 cut(s) 187, 355, 872, 895, 956, 965, 1007, 1336
Hin6I GCGC 1 cut(s) 67
HinP1I GCGC 1 cut(s) 67
HincII GTYRAC 1 cut(s) 57
HindII GTYRAC 1 cut(s) 57
HindIII AAGCTT 1 cut(s) 25
HinfI GANTC 6 cut(s) 178, 361, 806, 874, 1164, 1226
HpaII CCGG 2 cut(s) 570, 1124
HphI GGTGA 2 cut(s) 553, 662
Hpy166II GTNNAC 1 cut(s) 57
Hpy188I TCNGA 1 cut(s) 744
Hpy188III TCNNGA 4 cut(s) 365, 556, 801, 920
Hpy8I GTNNAC 1 cut(s) 57
HpyAV CCTTC 5 cut(s) 95, 337, 655, 681, 724
HpyCH4III ACNGT 8 cut(s) 140, 382, 937, 1072, 1096, 1120, 1377, 1441
HpyCH4IV ACGT 3 cut(s) 684, 717, 1495
HpyF10VI GCNNNNNNNGC 3 cut(s) 967, 1097, 1106
HpyF3I CTNAG 5 cut(s) 48, 741, 825, 1022, 1200
HpySE526I ACGT 3 cut(s) 684, 717, 1495
Hsp92II CATG 8 cut(s) 187, 355, 872, 895, 956, 965, 1007, 1336
HspAI GCGC 1 cut(s) 67
Ksp22I TGATCA 1 cut(s) 964
Kzo9I GATC 6 cut(s) 385, 543, 667, 797, 964, 1443
LmnI GCTCC 1 cut(s) 13
Lsp1109I GCAGC 8 cut(s) 17, 31, 104, 403, 431, 530, 1030, 1093
LweI GCATC 1 cut(s) 289
MaeI CTAG 1 cut(s) 656
MaeII ACGT 3 cut(s) 684, 717, 1495
MaeIII GTNAC 2 cut(s) 734, 1423
MalI GATC 6 cut(s) 387, 545, 669, 799, 966, 1445
MboI GATC 6 cut(s) 385, 543, 667, 797, 964, 1443
MflI RGATCY 2 cut(s) 667, 797
MhlI GDGCHC 3 cut(s) 81, 330, 840
MlsI TGGCCA 1 cut(s) 479
MluCI AATT 3 cut(s) 573, 641, 1386
MluNI TGGCCA 1 cut(s) 479
MlyI GAGTC 1 cut(s) 1220
MmeI TCCRAC 1 cut(s) 1372
Mox20I TGGCCA 1 cut(s) 479
Mph1103I ATGCAT 2 cut(s) 304, 1035
MscI TGGCCA 1 cut(s) 479
MseI TTAA 7 cut(s) 237, 581, 624, 761, 792, 972, 1047
MslI CAYNNNNRTG 3 cut(s) 1038, 1073, 1337
Msp20I TGGCCA 1 cut(s) 479
MspA1I CMGCKG 1 cut(s) 272
MspCI CTTAAG 1 cut(s) 971
MspI CCGG 2 cut(s) 570, 1124
MspR9I CCNGG 5 cut(s) 548, 1124, 1125, 1158, 1173
Mva1269I GAATGC 1 cut(s) 511
MvaI CCWGG 3 cut(s) 548, 1158, 1173
MvnI CGCG 1 cut(s) 69
MwoI GCNNNNNNNGC 3 cut(s) 967, 1097, 1106
NciI CCSGG 2 cut(s) 1124, 1125
NdeI CATATG 1 cut(s) 615
NdeII GATC 6 cut(s) 385, 543, 667, 797, 964, 1443
NheI GCTAGC 1 cut(s) 655
NlaIII CATG 8 cut(s) 187, 355, 872, 895, 956, 965, 1007, 1336
NlaIV GGNNCC 2 cut(s) 79, 1192
NmuCI GTSAC 2 cut(s) 734, 1423
NsiI ATGCAT 2 cut(s) 304, 1035
NspV TTCGAA 1 cut(s) 751
OliI CACNNNNGTG 1 cut(s) 1073
PctI GAATGC 1 cut(s) 511
PfeI GAWTC 5 cut(s) 178, 361, 806, 874, 1164
PfoI TCCNGGA 1 cut(s) 1171
PleI GAGTC 1 cut(s) 1220
PmaCI CACGTG 1 cut(s) 718
PmlI CACGTG 1 cut(s) 718
PpsI GAGTC 1 cut(s) 1220
Ppu21I YACGTR 1 cut(s) 718
PpuMI RGGWCCY 1 cut(s) 346
Psp5II RGGWCCY 1 cut(s) 346
Psp6I CCWGG 3 cut(s) 546, 1156, 1171
PspCI CACGTG 1 cut(s) 718
PspGI CCWGG 3 cut(s) 546, 1156, 1171
PspN4I GGNNCC 2 cut(s) 79, 1192
PspOMI GGGCCC 1 cut(s) 77
PspPI GGNCC 7 cut(s) 77, 78, 346, 550, 598, 1126, 1190
PspPPI RGGWCCY 1 cut(s) 346
PstI CTGCAG 2 cut(s) 421, 520
PsuI RGATCY 2 cut(s) 667, 797
PvuII CAGCTG 1 cut(s) 272
RsaI GTAC 3 cut(s) 254, 339, 1083
RsaNI GTAC 3 cut(s) 253, 338, 1082
RseI CAYNNNNRTG 3 cut(s) 1038, 1073, 1337
SaqAI TTAA 7 cut(s) 237, 581, 624, 761, 792, 972, 1047
Sau3AI GATC 6 cut(s) 385, 543, 667, 797, 964, 1443
Sau96I GGNCC 7 cut(s) 77, 78, 346, 550, 598, 1126, 1190
ScaI AGTACT 1 cut(s) 254
SchI GAGTC 1 cut(s) 1220
ScrFI CCNGG 5 cut(s) 548, 1124, 1125, 1158, 1173
SduI GDGCHC 3 cut(s) 81, 330, 840
SfaNI GCATC 1 cut(s) 289
SfcI CTRYAG 3 cut(s) 417, 516, 1431
SfuI TTCGAA 1 cut(s) 751
SinI GGWCC 1 cut(s) 346
SmaI CCCGGG 1 cut(s) 1125
SmiMI CAYNNNNRTG 3 cut(s) 1038, 1073, 1337
SmlI CTYRAG 2 cut(s) 556, 971
SmoI CTYRAG 2 cut(s) 556, 971
Sse9I AATT 3 cut(s) 573, 641, 1386
SsiI CCGC 3 cut(s) 195, 209, 899
SspMI CTAG 1 cut(s) 656
StyD4I CCNGG 5 cut(s) 546, 1122, 1123, 1156, 1171
TaaI ACNGT 8 cut(s) 140, 382, 937, 1072, 1096, 1120, 1377, 1441
TaiI ACGT 3 cut(s) 687, 720, 1498
TaqI TCGA 6 cut(s) 170, 286, 639, 751, 919, 1446
TasI AATT 3 cut(s) 573, 641, 1386
TatI WGTACW 2 cut(s) 252, 1081
TauI GCSGC 2 cut(s) 212, 901
TfiI GAWTC 5 cut(s) 178, 361, 806, 874, 1164
Tru1I TTAA 7 cut(s) 237, 581, 624, 761, 792, 972, 1047
Tru9I TTAA 7 cut(s) 237, 581, 624, 761, 792, 972, 1047
TscAI CASTG 7 cut(s) 18, 712, 826, 1099, 1123, 1380, 1446
TseFI GTSAC 2 cut(s) 734, 1423
TseI GCWGC 9 cut(s) 5, 19, 92, 416, 419, 518, 1018, 1106, 1490
Tsp45I GTSAC 2 cut(s) 734, 1423
TspDTI ATGAA 7 cut(s) 174, 263, 908, 923, 1207, 1231, 1353
TspMI CCCGGG 1 cut(s) 1123
TspRI CASTG 7 cut(s) 18, 712, 826, 1099, 1123, 1380, 1446
Vha464I CTTAAG 1 cut(s) 971
VpaK11BI GGWCC 1 cut(s) 346
XagI CCTNNNNNAGG 1 cut(s) 353
XcmI CCANNNNNNNNNTGG 1 cut(s) 1072
XmaI CCCGGG 1 cut(s) 1123
XspI CTAG 1 cut(s) 656
ZrmI AGTACT 1 cut(s) 254
Zsp2I ATGCAT 2 cut(s) 304, 1035
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.