Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0009348

Physical Location & Seq

Genomic Coordinates Reverse (-)

121248 .. 126378

Gene Structure 5131 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1431 bp

ATGCCAATAACAAAGGGGAAAAAAAAAAAAAAAAAAAAAACCAATTTTGCAAAATGCAAAACGTCAAACGGCGCTTTCATTTTGGTCTCTCGAAATATTGGGGTTTGGGAGTGTGAGCGAGCGAGCGCGAGCAAGCGAGTTGTCACCAAAACTATGAACTCGACCCCGGCTTACAGTAACGGCTACCAGCAGCAGCAGCAACAACAACCACACGGGATGAGCCAGAGGGATAGAGTTCGCCGGGGAACACGTGCGAGGTCACGTGAGCTCAGAGACAACTTCGGCAGTGGTGGTAATTTTGGCGGGCTTAGGGTTTCTGAGCACAATAAGCAGCAGCAACAACAACAGGGAGCGCCTTGTACGGACTTCGACATGGCCTATTTCCACTCCTACGCGCACGTTGGCATCCACGAAGAAATGATCAAGGACCGTGTACGCACTGAATCTTATAGGGCGGCAATCATGCAGCACCAGAGCTCTATAGCAGGCAAAGTTGTAGTGGATGTTGGCTGCGGCACAGGCATTCTTTCTATATTTTGTGCTCAGGCTGGTGCAAAACGTGTATATGCTGTTGATGCAAGTGACATTGCAGTGCAGGCAAATGAAGTTGTGAAAGCAAACAATCTATCTGAAACTGTCATCGTACTACATGGGCGAGTTGAGGATGTCAATATTGATGAGGAGGTTGATGTTATAATTTCAGAATGGATGGGCTACATGCTTCTGTATGAGAGTATGCTGGGAAGTGTGATCACAGCAAGAGATCGCTGGCTAAAACCTGGAGGTCTAATACTTCCTTCAAGTGCAACGTTGTACATGGCACCTATCACACATTCTGATAGATACAGTGAAAGCATAGATTTCTGGCGCAATGTTTATGGAATTGACATGTCTGCCATGTTGCCATTGGCAAAACAATGTGCGTTTGAAGAGCCATCTGTTGAGACGATTGTGGGTGAGAATGTTTTGACATGGCCACATGTGGTTAAGCATGTGGATTGCCATACAGTTACACATCATGAGTTAGAATCTGTTACGGCAAACTACAAGTTCAAGTCAATGATGCGAGCTCCACTACATGGGTTTGCATTTTGGTTTGATGTCGAATTCAGTGGACCTACGTTAGCTCCTACAAATAATCAGGCACCATCCTTGCTTTTTAACAATCTTCCAGTGGAGGGTCAGCAGAGGAAGAAACGAGCAAATCCCAACGAAGCATTGGTTCTGTCCACTGCACCTGAGGACCCTCCAACGCATTGGCAACAGACTGTGCTGTACTTCTATGAGCCAATTGAGCTGGAGCAAGATCAACTCATTGAAGGTTCTGTAACACTATCACAAAGCAAGGAAAACCGTCGATTCATGAATATCCACCTTGAATATGCCTCAGGTGGAAGATCCTTTGTAAAAGAATCTGTAATGAGACCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006325 GO:0006355 GO:0006464 GO:0006479 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0008168 GO:0008170 GO:0008213 GO:0008276 GO:0008469 GO:0008757 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0016043 GO:0016273 GO:0016274 GO:0016569 GO:0016570 GO:0016571 GO:0016740 GO:0016741 GO:0018193 GO:0018195 GO:0018216 GO:0019219 GO:0019222 GO:0019538 GO:0019919 GO:0031323 GO:0031326 GO:0032259 GO:0034969 GO:0035242 GO:0035246 GO:0035247 GO:0036211 GO:0042054 GO:0043170 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051276 GO:0060255 GO:0065007 GO:0071704 GO:0071840 GO:0080090 GO:0140096 GO:1901564 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Methyltransf_25 Methyltransf_31 PrmA

Protein Analysis

477

Amino Acids

53.52

Weight (kDa)

8.34

Isoelectric Point (pI)

49.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Methyltransf_9	PF08003	144 - 267	5.1e-07	Protein of unknown function (DUF1698)
TRM5-TYW2_MTfase	PF02475	151 - 239	3.3e-07	TRM5/TYW2 methyltransferase domain
TehB	PF03848	152 - 265	9.1e-07	Tellurite resistance protein TehB
MTS	PF05175	156 - 234	3.9e-08	Methyltransferase small domain
Methyltransf_23	PF13489	161 - 269	2.1e-06	Methyltransferase domain
PrmA	PF06325	162 - 235	3.9e-13	Ribosomal protein L11 methyltransferase (PrmA)
Methyltransf_31	PF13847	163 - 269	2.6e-07	Methyltransferase domain
Methyltransf_25	PF13649	166 - 262	1.1e-11	Methyltransferase domain
Methyltransf_11	PF08241	167 - 264	6.5e-10	Methyltransferase domain
PRMT_C	PF22528	268 - 372	7.5e-21	Arginine methyltransferase oligomerization subdomain
PRMT_C	PF22528	405 - 463	1.9e-14	Arginine methyltransferase oligomerization subdomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0009348)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G20020 AT3G20020 AT3G20020
fragaria_vesca	FvH4_4g37250 FvH4_4g37250
malus_domestica	MD13G1002200.v1.1
prunus_persica	Prupe.1G350300_v2.0.a1 Prupe.1G350300_v2.0.a1
pyrus_communis	pycom13g00190 pycom16g00120
rosa_chinensis	RchiOBHm_Chr4g0447051
rosa_laevigata	RLG00000005609
rosa_multiflora	Rmu_co8488887.1_g000001 Rmu_sc0014071.1_g000006 Rmu_sc0019356.1_g000005
rosa_roxburghii	Rroxscaffold_5G00387370
rosa_rugosa	Rorug04G0377700
rosa_samantha	Rh4AG439000 Rh4BG447900 Rh4CG465000 Rh4DG446400
rosa_wichuraiana	Rw4G037540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	695
AccB1I	GGYRCC	2 cut(s)	820, 1144
AccB7I	CCANNNNNTGG	1 cut(s)	1079
AccII	CGCG	2 cut(s)	128, 395
AciI	CCGC	3 cut(s)	303, 455, 513
AclI	AACGTT	1 cut(s)	809
AclWI	GGATC	1 cut(s)	1392
AcoI	YGGCCR	1 cut(s)	974
AcsI	RAATTY	1 cut(s)	1106
AcvI	CACGTG	2 cut(s)	251, 263
AfaI	GTAC	5 cut(s)	361, 435, 645, 815, 1277
AfiI	CCNNNNNNNGG	2 cut(s)	1079, 1178
AflIII	ACRYGT	4 cut(s)	248, 559, 888, 979
AgsI	TTSAA	5 cut(s)	801, 929, 1054, 1319, 1379
AjnI	CCWGG	1 cut(s)	778
AluBI	AGCT	5 cut(s)	268, 477, 1070, 1127, 1297
AluI	AGCT	5 cut(s)	268, 477, 1070, 1127, 1297
Alw21I	GWGCWC	5 cut(s)	270, 324, 479, 544, 1072
Alw26I	GTCTC	4 cut(s)	91, 267, 938, 1417
AlwI	GGATC	1 cut(s)	1392
AoxI	GGCC	2 cut(s)	375, 974
ApeKI	GCWGC	7 cut(s)	190, 193, 196, 331, 334, 466, 510
ApoI	RAATTY	1 cut(s)	1106
AspLEI	GCGC	5 cut(s)	74, 128, 355, 397, 870
AspS9I	GGNCC	3 cut(s)	427, 1115, 1243
AsuC2I	CCSGG	2 cut(s)	167, 242
AsuHPI	GGTGA	2 cut(s)	136, 968
AvaII	GGWCC	3 cut(s)	427, 1115, 1243
AxyI	CCTNAGG	2 cut(s)	1239, 1387
BalI	TGGCCA	1 cut(s)	976
BanI	GGYRCC	2 cut(s)	820, 1144
BanII	GRGCYC	3 cut(s)	270, 479, 1072
BbrPI	CACGTG	2 cut(s)	251, 263
Bbv12I	GWGCWC	5 cut(s)	270, 324, 479, 544, 1072
BbvI	GCAGC	7 cut(s)	202, 205, 208, 343, 346, 478, 497
BccI	CCATC	3 cut(s)	703, 943, 1156
BceAI	ACGGC	3 cut(s)	85, 196, 1053
BciT130I	CCWGG	1 cut(s)	780
BclI	TGATCA	2 cut(s)	420, 750
BcnI	CCSGG	2 cut(s)	167, 242
BcoDI	GTCTC	4 cut(s)	91, 267, 938, 1417
BfmI	CTRYAG	1 cut(s)	480
BfoI	RGCGCY	2 cut(s)	75, 356
BisI	GCNGC	9 cut(s)	191, 194, 197, 332, 335, 456, 467, 511, 514
BlsI	GCNGC	9 cut(s)	192, 195, 198, 333, 336, 457, 468, 512, 515
Bme1390I	CCNGG	3 cut(s)	167, 242, 780
Bme18I	GGWCC	3 cut(s)	427, 1115, 1243
BmgT120I	GGNCC	3 cut(s)	427, 1115, 1243
BmiI	GGNNCC	3 cut(s)	822, 1146, 1245
BmrFI	CCNGG	3 cut(s)	167, 242, 780
BmsI	GCATC	3 cut(s)	414, 565, 1053
BpmI	CTGGAG	2 cut(s)	801, 1319
Bpu10I	CCTNAGC	2 cut(s)	308, 543
BpuMI	CCSGG	2 cut(s)	167, 242
BsaAI	YACGTR	2 cut(s)	251, 263
BsaI	GGTCTC	2 cut(s)	91, 1417
BsaJI	CCNNGG	2 cut(s)	165, 241
BsaXI	ACNNNNNCTCC	2 cut(s)	1111, 1141
Bsc4I	CCNNNNNNNGG	2 cut(s)	1079, 1178
Bse1I	ACTGG	1 cut(s)	1172
Bse21I	CCTNAGG	2 cut(s)	1239, 1387
Bse3DI	GCAATG	2 cut(s)	585, 877
BseBI	CCWGG	1 cut(s)	780
BseDI	CCNNGG	2 cut(s)	165, 241
BseGI	GGATG	6 cut(s)	222, 405, 508, 670, 714, 1148
BseLI	CCNNNNNNNGG	2 cut(s)	1079, 1178
BseMI	GCAATG	2 cut(s)	585, 877
BseMII	CTCAG	5 cut(s)	283, 309, 557, 1230, 1401
BseNI	ACTGG	1 cut(s)	1172
BseRI	GAGGAG	1 cut(s)	695
BseXI	GCAGC	7 cut(s)	202, 205, 208, 343, 346, 478, 497
BseYI	CCCAGC	1 cut(s)	739
BsgI	GTGCAG	2 cut(s)	614, 1218
Bsh1236I	CGCG	2 cut(s)	128, 395
BshFI	GGCC	2 cut(s)	377, 976
BshNI	GGYRCC	2 cut(s)	820, 1144
BsiHKAI	GWGCWC	5 cut(s)	270, 324, 479, 544, 1072
BsiSI	CCGG	2 cut(s)	167, 241
BslI	CCNNNNNNNGG	2 cut(s)	1079, 1178
BsmAI	GTCTC	4 cut(s)	91, 267, 938, 1417
BsmBI	CGTCTC	1 cut(s)	938
BsmI	GAATGC	1 cut(s)	522
BsnI	GGCC	2 cut(s)	377, 976
Bso31I	GGTCTC	2 cut(s)	91, 1417
Bsp1286I	GDGCHC	5 cut(s)	270, 324, 479, 544, 1072
Bsp1407I	TGTACA	1 cut(s)	813
Bsp143I	GATC	5 cut(s)	420, 750, 763, 1306, 1397
BspACI	CCGC	3 cut(s)	303, 455, 513
BspANI	GGCC	2 cut(s)	377, 976
BspCNI	CTCAG	5 cut(s)	282, 310, 556, 1231, 1400
BspFNI	CGCG	2 cut(s)	128, 395
BspHI	TCATGA	2 cut(s)	1018, 1362
BspLI	GGNNCC	3 cut(s)	822, 1146, 1245
BspPI	GGATC	1 cut(s)	1392
BspQI	GCTCTTC	1 cut(s)	924
BspT107I	GGYRCC	2 cut(s)	820, 1144
BspTNI	GGTCTC	2 cut(s)	91, 1417
BsrDI	GCAATG	2 cut(s)	585, 877
BsrGI	TGTACA	1 cut(s)	813
BsrI	ACTGG	1 cut(s)	1172
BssECI	CCNNGG	2 cut(s)	165, 241
BssMI	GATC	5 cut(s)	420, 750, 763, 1306, 1397
Bst2UI	CCWGG	1 cut(s)	780
Bst4CI	ACNGT	7 cut(s)	176, 431, 637, 848, 1009, 1270, 1355
Bst6I	CTCTTC	1 cut(s)	924
BstAUI	TGTACA	1 cut(s)	813
BstBAI	YACGTR	2 cut(s)	251, 263
BstC8I	GCNNGC	9 cut(s)	120, 124, 130, 134, 305, 487, 597, 770, 1068
BstDEI	CTNAG	6 cut(s)	269, 308, 318, 543, 1239, 1387
BstF5I	GGATG	6 cut(s)	222, 405, 508, 670, 714, 1148
BstFNI	CGCG	2 cut(s)	128, 395
BstH2I	RGCGCY	2 cut(s)	75, 356
BstHHI	GCGC	5 cut(s)	74, 128, 355, 397, 870
BstKTI	GATC	5 cut(s)	423, 753, 766, 1309, 1400
BstMAI	GTCTC	4 cut(s)	91, 267, 938, 1417
BstMBI	GATC	5 cut(s)	420, 750, 763, 1306, 1397
BstMWI	GCNNNNNNNGC	6 cut(s)	196, 328, 519, 575, 596, 1294
BstNI	CCWGG	1 cut(s)	780
BstNSI	RCATGY	4 cut(s)	721, 892, 983, 995
BstSCI	CCNGG	3 cut(s)	165, 240, 778
BstSFI	CTRYAG	1 cut(s)	480
BstUI	CGCG	2 cut(s)	128, 395
BstV1I	GCAGC	7 cut(s)	202, 205, 208, 343, 346, 478, 497
BstX2I	RGATCY	1 cut(s)	1397
BstXI	CCANNNNNNTGG	1 cut(s)	1257
BstYI	RGATCY	1 cut(s)	1397
Bsu36I	CCTNAGG	2 cut(s)	1239, 1387
BsuRI	GGCC	2 cut(s)	377, 976
BtsCI	GGATG	6 cut(s)	222, 405, 508, 670, 714, 1148
BtsI	GCAGTG	3 cut(s)	292, 597, 1230
BtsIMutI	CAGTG	7 cut(s)	292, 438, 597, 853, 1117, 1179, 1230
Cac8I	GCNNGC	9 cut(s)	120, 124, 130, 134, 305, 487, 597, 770, 1068
CciI	TCATGA	2 cut(s)	1018, 1362
CfoI	GCGC	5 cut(s)	74, 128, 355, 397, 870
Cfr13I	GGNCC	3 cut(s)	427, 1115, 1243
Csp6I	GTAC	5 cut(s)	360, 434, 644, 814, 1276
CviQI	GTAC	5 cut(s)	360, 434, 644, 814, 1276
DdeI	CTNAG	6 cut(s)	269, 308, 318, 543, 1239, 1387
DpnI	GATC	5 cut(s)	422, 752, 765, 1308, 1399
DpnII	GATC	5 cut(s)	420, 750, 763, 1306, 1397
EaeI	YGGCCR	1 cut(s)	974
Eam1104I	CTCTTC	1 cut(s)	924
EarI	CTCTTC	1 cut(s)	924
Ecl136II	GAGCTC	3 cut(s)	268, 477, 1070
Eco24I	GRGCYC	3 cut(s)	270, 479, 1072
Eco31I	GGTCTC	2 cut(s)	91, 1417
Eco47I	GGWCC	3 cut(s)	427, 1115, 1243
Eco53kI	GAGCTC	3 cut(s)	268, 477, 1070
Eco72I	CACGTG	2 cut(s)	251, 263
Eco81I	CCTNAGG	2 cut(s)	1239, 1387
EcoICRI	GAGCTC	3 cut(s)	268, 477, 1070
EcoO109I	RGGNCCY	1 cut(s)	1243
EcoRI	GAATTC	1 cut(s)	1106
EcoRII	CCWGG	1 cut(s)	778
EcoT38I	GRGCYC	3 cut(s)	270, 479, 1072
Esp3I	CGTCTC	1 cut(s)	938
FauI	CCCGC	1 cut(s)	296
FbaI	TGATCA	2 cut(s)	420, 750
Fnu4HI	GCNGC	9 cut(s)	191, 194, 197, 332, 335, 456, 467, 511, 514
FokI	GGATG	6 cut(s)	229, 392, 515, 677, 721, 1135
FriOI	GRGCYC	3 cut(s)	270, 479, 1072
Fsp4HI	GCNGC	9 cut(s)	191, 194, 197, 332, 335, 456, 467, 511, 514
GlaI	GCGC	5 cut(s)	73, 127, 354, 396, 869
GluI	GCNGC	9 cut(s)	191, 194, 197, 332, 335, 456, 467, 511, 514
GsaI	CCCAGC	1 cut(s)	743
GsuI	CTGGAG	2 cut(s)	801, 1319
HaeII	RGCGCY	2 cut(s)	75, 356
HaeIII	GGCC	2 cut(s)	377, 976
HapII	CCGG	2 cut(s)	167, 241
HhaI	GCGC	5 cut(s)	74, 128, 355, 397, 870
Hin6I	GCGC	5 cut(s)	72, 126, 353, 395, 868
HinP1I	GCGC	5 cut(s)	72, 126, 353, 395, 868
HinfI	GANTC	4 cut(s)	443, 1028, 1359, 1412
HpaII	CCGG	2 cut(s)	167, 241
HphI	GGTGA	2 cut(s)	136, 968
Hpy166II	GTNNAC	3 cut(s)	434, 1115, 1230
Hpy188I	TCNGA	5 cut(s)	272, 319, 631, 703, 838
Hpy188III	TCNNGA	3 cut(s)	90, 1019, 1363
Hpy8I	GTNNAC	3 cut(s)	434, 1115, 1230
Hpy99I	CGWCG	1 cut(s)	1359
HpyAV	CCTTC	2 cut(s)	807, 1313
HpyCH4III	ACNGT	7 cut(s)	176, 431, 637, 848, 1009, 1270, 1355
HpyCH4IV	ACGT	7 cut(s)	62, 250, 262, 399, 559, 809, 1121
HpyF10VI	GCNNNNNNNGC	6 cut(s)	196, 328, 519, 575, 596, 1294
HpyF3I	CTNAG	6 cut(s)	269, 308, 318, 543, 1239, 1387
HpySE526I	ACGT	7 cut(s)	62, 250, 262, 399, 559, 809, 1121
HspAI	GCGC	5 cut(s)	72, 126, 353, 395, 868
Ksp22I	TGATCA	2 cut(s)	420, 750
Kzo9I	GATC	5 cut(s)	420, 750, 763, 1306, 1397
LguI	GCTCTTC	1 cut(s)	924
LmnI	GCTCC	4 cut(s)	350, 1075, 1132, 1300
Lsp1109I	GCAGC	7 cut(s)	202, 205, 208, 343, 346, 478, 497
LweI	GCATC	3 cut(s)	414, 565, 1053
MaeII	ACGT	7 cut(s)	62, 250, 262, 399, 559, 809, 1121
MaeIII	GTNAC	7 cut(s)	142, 176, 258, 581, 1009, 1033, 1327
MalI	GATC	5 cut(s)	422, 752, 765, 1308, 1399
MboI	GATC	5 cut(s)	420, 750, 763, 1306, 1397
MboII	GAAGA	5 cut(s)	425, 941, 1160, 1204, 1407
MfeI	CAATTG	1 cut(s)	1290
MflI	RGATCY	1 cut(s)	1397
MhlI	GDGCHC	5 cut(s)	270, 324, 479, 544, 1072
MlsI	TGGCCA	1 cut(s)	976
MluCI	AATT	6 cut(s)	43, 295, 696, 882, 1106, 1290
MluNI	TGGCCA	1 cut(s)	976
MmeI	TCCRAC	1 cut(s)	1274
Mox20I	TGGCCA	1 cut(s)	976
MscI	TGGCCA	1 cut(s)	976
MseI	TTAA	2 cut(s)	987, 1161
MslI	CAYNNNNRTG	1 cut(s)	590
Msp20I	TGGCCA	1 cut(s)	976
MspI	CCGG	2 cut(s)	167, 241
MspR9I	CCNGG	3 cut(s)	167, 242, 780
MunI	CAATTG	1 cut(s)	1290
Mva1269I	GAATGC	1 cut(s)	522
MvaI	CCWGG	1 cut(s)	780
MvnI	CGCG	2 cut(s)	128, 395
MwoI	GCNNNNNNNGC	6 cut(s)	196, 328, 519, 575, 596, 1294
NciI	CCSGG	2 cut(s)	167, 242
NdeII	GATC	5 cut(s)	420, 750, 763, 1306, 1397
NlaIV	GGNNCC	3 cut(s)	822, 1146, 1245
NmuCI	GTSAC	3 cut(s)	142, 258, 581
NspI	RCATGY	4 cut(s)	721, 892, 983, 995
PagI	TCATGA	2 cut(s)	1018, 1362
PciI	ACATGT	2 cut(s)	888, 979
PciSI	GCTCTTC	1 cut(s)	924
PctI	GAATGC	1 cut(s)	522
PfeI	GAWTC	4 cut(s)	443, 1028, 1359, 1412
PflMI	CCANNNNNTGG	1 cut(s)	1079
PkrI	GCNGC	9 cut(s)	192, 195, 198, 333, 336, 457, 468, 512, 515
PmaCI	CACGTG	2 cut(s)	251, 263
PmlI	CACGTG	2 cut(s)	251, 263
Ppu21I	YACGTR	2 cut(s)	251, 263
PpuMI	RGGWCCY	1 cut(s)	1243
PscI	ACATGT	2 cut(s)	888, 979
PsiI	TTATAA	1 cut(s)	695
Psp124BI	GAGCTC	3 cut(s)	270, 479, 1072
Psp1406I	AACGTT	1 cut(s)	809
Psp5II	RGGWCCY	1 cut(s)	1243
Psp6I	CCWGG	1 cut(s)	778
PspCI	CACGTG	2 cut(s)	251, 263
PspFI	CCCAGC	1 cut(s)	739
PspGI	CCWGG	1 cut(s)	778
PspN4I	GGNNCC	3 cut(s)	822, 1146, 1245
PspPI	GGNCC	3 cut(s)	427, 1115, 1243
PspPPI	RGGWCCY	1 cut(s)	1243
PsuI	RGATCY	1 cut(s)	1397
RsaI	GTAC	5 cut(s)	361, 435, 645, 815, 1277
RsaNI	GTAC	5 cut(s)	360, 434, 644, 814, 1276
RseI	CAYNNNNRTG	1 cut(s)	590
SacI	GAGCTC	3 cut(s)	270, 479, 1072
SapI	GCTCTTC	1 cut(s)	924
SaqAI	TTAA	2 cut(s)	987, 1161
SatI	GCNGC	9 cut(s)	191, 194, 197, 332, 335, 456, 467, 511, 514
Sau3AI	GATC	5 cut(s)	420, 750, 763, 1306, 1397
Sau96I	GGNCC	3 cut(s)	427, 1115, 1243
ScrFI	CCNGG	3 cut(s)	167, 242, 780
SduI	GDGCHC	5 cut(s)	270, 324, 479, 544, 1072
SfaNI	GCATC	3 cut(s)	414, 565, 1053
SfcI	CTRYAG	1 cut(s)	480
SinI	GGWCC	3 cut(s)	427, 1115, 1243
SmiMI	CAYNNNNRTG	1 cut(s)	590
Sse9I	AATT	6 cut(s)	43, 295, 696, 882, 1106, 1290
SsiI	CCGC	3 cut(s)	303, 455, 513
SspI	AATATT	2 cut(s)	97, 673
SstI	GAGCTC	3 cut(s)	270, 479, 1072
StyD4I	CCNGG	3 cut(s)	165, 240, 778
TaaI	ACNGT	7 cut(s)	176, 431, 637, 848, 1009, 1270, 1355
TaiI	ACGT	7 cut(s)	65, 253, 265, 402, 562, 812, 1124
TaqI	TCGA	5 cut(s)	91, 161, 369, 1104, 1357
TasI	AATT	6 cut(s)	43, 295, 696, 882, 1106, 1290
TatI	WGTACW	2 cut(s)	813, 1275
TauI	GCSGC	2 cut(s)	458, 516
TfiI	GAWTC	4 cut(s)	443, 1028, 1359, 1412
Tru1I	TTAA	2 cut(s)	987, 1161
Tru9I	TTAA	2 cut(s)	987, 1161
TscAI	CASTG	7 cut(s)	292, 445, 597, 853, 1117, 1179, 1237
TseFI	GTSAC	3 cut(s)	142, 258, 581
TseI	GCWGC	7 cut(s)	190, 193, 196, 331, 334, 466, 510
Tsp45I	GTSAC	3 cut(s)	142, 258, 581
TspDTI	ATGAA	5 cut(s)	67, 170, 618, 1351, 1379
TspGWI	ACGGA	1 cut(s)	377
TspRI	CASTG	7 cut(s)	292, 445, 597, 853, 1117, 1179, 1237
Van91I	CCANNNNNTGG	1 cut(s)	1079
VpaK11BI	GGWCC	3 cut(s)	427, 1115, 1243
XapI	RAATTY	1 cut(s)	1106
XceI	RCATGY	4 cut(s)	721, 892, 983, 995
XcmI	CCANNNNNNNNNTGG	2 cut(s)	904, 1216

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.