pycom13g03820

acetyltransferase component of pyruvate dehydrogenase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Reverse (-)
2539038 .. 2541490
2453 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g03820.4

Sequence Viewer

Length: 1422 bp
ATGGCGTCGTCTCCTTTCCTCTCCAAGACCACCATTTCCTTCTCCTCCTCCATCTCCACCGCCCTCCCATGGCGCCCCTCCCCCTCCTCCTCCTCCACCGCATTCCGCTCCATTCCCCGCAGCCGCACCCTCACCGTCCAATCCAAGATCAGGGAGATCTTCATGCCTGCTCTCAGCTCCACTATGACCGAGGGCAAGATCGTCTCCTGGGTCAAATCCGAGGGCGACGTCCTCTCCAAAGGCGAGAGCGTCGTTGTTGTCGAGTCTGACAAAGCCGACATGGACGTAGAGACCTTCTACGACGGGATTCTCGCCGCAATCGTAGTCGGGGAAGGCGAGACCGCCCCCGTCGGCGCCGCCATCGGGCTTCTCGCTGAGACCGAAGAGGAAGTCGCCGAGGCCAGGGAAAAAGCCAAATCCACTTCGTCTTCTTCATCCCCAGCTGTTACGCCCACGCCTCCTCCTGCTACCGCCACTCCCGCCCCTGCAATTGCCCAGCCTGCTCCATCTGCTACTCCTACTTACACTGCCAAAAAGGGCGTGGCCACTCCTTTTGCTAAGAAGCTAGCCAAGCAGCACAAGGTCGAAATTGCCTCCGTGGTGGGCACCGGCCCATTTGGCCGAATTACGCCTGCTGACGTGGAGGCGGCCGCCGGAATTGTCAAGCCTGCTAAACCCGTCGCTGCCGAGCCCACTCCGGTGGCCGCTGCTCCACCCAAGCCTTCTGCTGCAGCCCCGCCTCTGCTTCCCGGCTCAACCGTGGTGCCATTTACCACGATGCAGGCTGCTGTTTCGAAGAACATGGTCGAAAGTCTCTCGGTGCCGACTTTCCGGGTCGGCTACCCGATTAACAGTGACGCCATCGACGCCCTTTATGAGAAGGTGAAACCAAAGGGTGTGACAATGACTGCATTGTTGGCCAAGGCAGCTGCTATGGCACTTGCTCAGCACCCGGTTGTGAATGCGAGCTGCAAAGACGGGAAGAGCTTTTCGTATAACAGCAGCATAAACATTGCTGTTGCTGTGGCAATCAATGGAGGACTCATAACCCCTGTTCTTCAGGATGCTGATAAGTTGGATTTGTATTTGCTATCCCAGAAATGGAAAGAGTTAGTGGAGAAGGCCCGTTCAAAGCAACTTCAGCCCCACGAGTACACAACAGGAACTTTCACCTTGTCCAATTTGGGCATGTTTGGAGTGGACAGGTTTGATGCTATTCTTCCACCAGGGCAGGGGGCTATCATGGCTGTTGGAGCTTCAAAGCCAACTGTTGTGGCTGATACAGATGGATTCTTCAGTGTAAAAAGTAAAATGCTGGTGAATGTAACTGCTGATCACCGGATTGTTTATGGTGCTGATTTGGCTGCCTTCCTCAAGACATTTGCAAAGATTGTTGAGAACCCAGAGAGCCTCACATTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

474

Amino Acids

49.21

Weight (kDa)

8.63

Isoelectric Point (pI)

42.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0011790)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 231
AccB1I GGYRCC 5 cut(s) 72, 353, 605, 763, 820
AccBSI CCGCTC 1 cut(s) 108
AcoI YGGCCR 5 cut(s) 543, 619, 648, 702, 918
AcuI CTGAAG 3 cut(s) 1043, 1124, 1279
AcyI GRCGYC 6 cut(s) 5, 73, 228, 354, 858, 867
AfaI GTAC 1 cut(s) 1154
AfiI CCNNNNNNNGG 6 cut(s) 69, 150, 363, 402, 1101, 1232
AgsI TTSAA 2 cut(s) 1131, 1260
AjiI CACGTC 1 cut(s) 640
AjnI CCWGG 3 cut(s) 206, 401, 1225
AleI CACNNNNGTG 1 cut(s) 698
AluBI AGCT 7 cut(s) 177, 443, 565, 929, 969, 987, 1256
AluI AGCT 7 cut(s) 177, 443, 565, 929, 969, 987, 1256
Alw26I GTCTC 6 cut(s) 15, 208, 284, 332, 371, 818
AoxI GGCC 8 cut(s) 399, 543, 610, 619, 648, 702, 918, 1122
ArsI GACNNNNNNTTYG 2 cut(s) 375, 407
AspLEI GCGC 2 cut(s) 75, 356
AspS9I GGNCC 2 cut(s) 611, 1123
AsuC2I CCSGG 3 cut(s) 750, 833, 953
AsuHPI GGTGA 5 cut(s) 124, 895, 1162, 1328, 1330
AsuII TTCGAA 1 cut(s) 794
AsuNHI GCTAGC 1 cut(s) 565
BaeGI GKGCMC 1 cut(s) 608
BalI TGGCCA 2 cut(s) 545, 920
BanI GGYRCC 5 cut(s) 72, 353, 605, 763, 820
BanII GRGCYC 1 cut(s) 693
BauI CACGAG 1 cut(s) 1148
BbsI GAAGAC 1 cut(s) 420
BccI CCATC 5 cut(s) 59, 368, 514, 869, 1280
BciT130I CCWGG 3 cut(s) 208, 403, 1227
BclI TGATCA 1 cut(s) 1333
BcnI CCSGG 3 cut(s) 750, 833, 953
BcoDI GTCTC 6 cut(s) 15, 208, 284, 332, 371, 818
BfaI CTAG 1 cut(s) 566
BfmI CTRYAG 1 cut(s) 729
BfoI RGCGCY 2 cut(s) 76, 357
BglI GCCNNNNNGGC 1 cut(s) 618
BglII AGATCT 1 cut(s) 156
BlpI GCTNAGC 1 cut(s) 945
Bme1390I CCNGG 6 cut(s) 208, 403, 750, 833, 953, 1227
BmgBI CACGTC 1 cut(s) 640
BmgT120I GGNCC 2 cut(s) 611, 1123
BmiI GGNNCC 5 cut(s) 74, 355, 607, 765, 822
BmrFI CCNGG 6 cut(s) 208, 403, 750, 833, 953, 1227
BmsI GCATC 3 cut(s) 768, 1054, 1201
BmtI GCTAGC 1 cut(s) 569
BpiI GAAGAC 1 cut(s) 420
Bpu1102I GCTNAGC 1 cut(s) 945
Bpu14I TTCGAA 1 cut(s) 794
BpuEI CTTGAG 1 cut(s) 1358
BpuMI CCSGG 3 cut(s) 750, 833, 953
BsaHI GRCGYC 6 cut(s) 5, 73, 228, 354, 858, 867
BsaI GGTCTC 3 cut(s) 284, 332, 371
BsaWI WCCGGW 2 cut(s) 697, 1338
BsaXI ACNNNNNCTCC 6 cut(s) 218, 248, 445, 460, 475, 490
Bsc4I CCNNNNNNNGG 6 cut(s) 69, 150, 363, 402, 1101, 1232
Bse118I RCCGGY 1 cut(s) 608
Bse3DI GCAATG 1 cut(s) 1011
BseBI CCWGG 3 cut(s) 208, 403, 1227
BseGI GGATG 2 cut(s) 434, 1069
BseLI CCNNNNNNNGG 6 cut(s) 69, 150, 363, 402, 1101, 1232
BseMI GCAATG 1 cut(s) 1011
BseMII CTCAG 3 cut(s) 187, 366, 959
BseRI GAGGAG 6 cut(s) 34, 37, 76, 79, 82, 450
BseSI GKGCMC 1 cut(s) 608
BseX3I CGGCCG 1 cut(s) 648
BseYI CCCAGC 2 cut(s) 439, 495
Bsh1285I CGRYCG 1 cut(s) 651
BshFI GGCC 8 cut(s) 401, 545, 612, 621, 650, 704, 920, 1124
BshNI GGYRCC 5 cut(s) 72, 353, 605, 763, 820
BsiEI CGRYCG 1 cut(s) 651
BsiSI CCGG 7 cut(s) 609, 654, 698, 750, 832, 953, 1339
BslI CCNNNNNNNGG 6 cut(s) 69, 150, 363, 402, 1101, 1232
BsmAI GTCTC 6 cut(s) 15, 208, 284, 332, 371, 818
BsmBI CGTCTC 2 cut(s) 15, 208
BsmI GAATGC 2 cut(s) 101, 967
BsnI GGCC 8 cut(s) 401, 545, 612, 621, 650, 704, 920, 1124
Bso31I GGTCTC 3 cut(s) 284, 332, 371
Bsp119I TTCGAA 1 cut(s) 794
Bsp1286I GDGCHC 2 cut(s) 608, 693
Bsp143I GATC 4 cut(s) 147, 156, 198, 1333
Bsp1720I GCTNAGC 1 cut(s) 945
Bsp19I CCATGG 1 cut(s) 68
BspANI GGCC 8 cut(s) 401, 545, 612, 621, 650, 704, 920, 1124
BspCNI CTCAG 3 cut(s) 186, 367, 958
BspLI GGNNCC 5 cut(s) 74, 355, 607, 765, 822
BspMAI CTGCAG 1 cut(s) 733
BspOI GCTAGC 1 cut(s) 569
BspQI GCTCTTC 1 cut(s) 977
BspT104I TTCGAA 1 cut(s) 794
BspT107I GGYRCC 5 cut(s) 72, 353, 605, 763, 820
BspTNI GGTCTC 3 cut(s) 284, 332, 371
BsrBI CCGCTC 1 cut(s) 108
BsrDI GCAATG 1 cut(s) 1011
BsrFI RCCGGY 1 cut(s) 608
BssAI RCCGGY 1 cut(s) 608
BssMI GATC 4 cut(s) 147, 156, 198, 1333
BssNI GRCGYC 6 cut(s) 5, 73, 228, 354, 858, 867
BssSI CACGAG 1 cut(s) 1148
BssT1I CCWWGG 2 cut(s) 68, 921
Bst2BI CACGAG 1 cut(s) 1148
Bst2UI CCWGG 3 cut(s) 208, 403, 1227
Bst4CI ACNGT 4 cut(s) 136, 760, 854, 1270
Bst6I CTCTTC 2 cut(s) 378, 977
BstACI GRCGYC 6 cut(s) 5, 73, 228, 354, 858, 867
BstBI TTCGAA 1 cut(s) 794
BstC8I GCNNGC 7 cut(s) 168, 501, 567, 633, 669, 783, 967
BstDEI CTNAG 4 cut(s) 173, 375, 558, 945
BstDSI CCRYGG 3 cut(s) 68, 597, 759
BstF5I GGATG 2 cut(s) 434, 1069
BstH2I RGCGCY 2 cut(s) 76, 357
BstHHI GCGC 2 cut(s) 75, 356
BstKTI GATC 4 cut(s) 150, 159, 201, 1336
BstMAI GTCTC 6 cut(s) 15, 208, 284, 332, 371, 818
BstMBI GATC 4 cut(s) 147, 156, 198, 1333
BstMCI CGRYCG 1 cut(s) 651
BstNI CCWGG 3 cut(s) 208, 403, 1227
BstNSI RCATGY 1 cut(s) 1192
BstSCI CCNGG 6 cut(s) 206, 401, 748, 831, 951, 1225
BstSFI CTRYAG 1 cut(s) 729
BstSLI GKGCMC 1 cut(s) 608
BstV2I GAAGAC 1 cut(s) 420
BstX2I RGATCY 1 cut(s) 156
BstXI CCANNNNNNTGG 1 cut(s) 700
BstYI RGATCY 1 cut(s) 156
BstZI CGGCCG 1 cut(s) 648
BsuRI GGCC 8 cut(s) 401, 545, 612, 621, 650, 704, 920, 1124
BtgI CCRYGG 3 cut(s) 68, 597, 759
BtrI CACGTC 1 cut(s) 640
BtsCI GGATG 2 cut(s) 434, 1069
BtsI GCAGTG 1 cut(s) 525
BtsIMutI CAGTG 3 cut(s) 525, 859, 1303
Cac8I GCNNGC 7 cut(s) 168, 501, 567, 633, 669, 783, 967
CciNI GCGGCCGC 1 cut(s) 648
CfoI GCGC 2 cut(s) 75, 356
Cfr10I RCCGGY 1 cut(s) 608
Cfr13I GGNCC 2 cut(s) 611, 1123
CseI GACGC 3 cut(s) 238, 866, 875
Csp6I GTAC 1 cut(s) 1153
CspCI CAANNNNNGTGG 4 cut(s) 535, 570, 1254, 1289
CviAII CATG 6 cut(s) 69, 163, 280, 802, 1189, 1243
CviQI GTAC 1 cut(s) 1153
DdeI CTNAG 4 cut(s) 173, 375, 558, 945
DinI GGCGCC 2 cut(s) 74, 355
DpnI GATC 4 cut(s) 149, 158, 200, 1335
DpnII GATC 4 cut(s) 147, 156, 198, 1333
EaeI YGGCCR 5 cut(s) 543, 619, 648, 702, 918
EagI CGGCCG 1 cut(s) 648
Eam1104I CTCTTC 2 cut(s) 378, 977
EarI CTCTTC 2 cut(s) 378, 977
EclXI CGGCCG 1 cut(s) 648
Eco130I CCWWGG 2 cut(s) 68, 921
Eco24I GRGCYC 1 cut(s) 693
Eco31I GGTCTC 3 cut(s) 284, 332, 371
Eco52I CGGCCG 1 cut(s) 648
Eco57I CTGAAG 3 cut(s) 1043, 1124, 1279
EcoRII CCWGG 3 cut(s) 206, 401, 1225
EcoT14I CCWWGG 2 cut(s) 68, 921
EcoT38I GRGCYC 1 cut(s) 693
EgeI GGCGCC 2 cut(s) 74, 355
EheI GGCGCC 2 cut(s) 74, 355
ErhI CCWWGG 2 cut(s) 68, 921
Esp3I CGTCTC 2 cut(s) 15, 208
FaeI CATG 6 cut(s) 72, 166, 283, 805, 1192, 1246
FatI CATG 6 cut(s) 68, 162, 279, 801, 1188, 1242
FauI CCCGC 3 cut(s) 125, 487, 744
FbaI TGATCA 1 cut(s) 1333
FokI GGATG 2 cut(s) 421, 1076
FriOI GRGCYC 1 cut(s) 693
FspBI CTAG 1 cut(s) 566
GlaI GCGC 2 cut(s) 74, 355
GsaI CCCAGC 2 cut(s) 443, 499
HaeII RGCGCY 2 cut(s) 76, 357
HaeIII GGCC 8 cut(s) 401, 545, 612, 621, 650, 704, 920, 1124
HapII CCGG 7 cut(s) 609, 654, 698, 750, 832, 953, 1339
HgaI GACGC 3 cut(s) 238, 866, 875
HhaI GCGC 2 cut(s) 75, 356
Hin1I GRCGYC 6 cut(s) 5, 73, 228, 354, 858, 867
Hin1II CATG 6 cut(s) 72, 166, 283, 805, 1192, 1246
Hin6I GCGC 2 cut(s) 73, 354
HinP1I GCGC 2 cut(s) 73, 354
HinfI GANTC 4 cut(s) 263, 307, 1041, 1290
HpaII CCGG 7 cut(s) 609, 654, 698, 750, 832, 953, 1339
HphI GGTGA 5 cut(s) 124, 895, 1162, 1328, 1330
Hpy166II GTNNAC 2 cut(s) 1155, 1201
Hpy188I TCNGA 2 cut(s) 220, 268
Hpy188III TCNNGA 2 cut(s) 1061, 1375
Hpy8I GTNNAC 2 cut(s) 1155, 1201
Hpy99I CGWCG 7 cut(s) 10, 230, 254, 305, 353, 683, 869
HpyAV CCTTC 7 cut(s) 49, 304, 326, 732, 874, 1114, 1378
HpyCH4III ACNGT 4 cut(s) 136, 760, 854, 1270
HpyCH4IV ACGT 3 cut(s) 228, 285, 639
HpyCH4V TGCA 6 cut(s) 488, 731, 781, 911, 972, 1385
HpyF3I CTNAG 4 cut(s) 173, 375, 558, 945
HpySE526I ACGT 3 cut(s) 228, 285, 639
Hsp92I GRCGYC 6 cut(s) 5, 73, 228, 354, 858, 867
Hsp92II CATG 6 cut(s) 72, 166, 283, 805, 1192, 1246
HspAI GCGC 2 cut(s) 73, 354
KasI GGCGCC 2 cut(s) 72, 353
Ksp22I TGATCA 1 cut(s) 1333
Kzo9I GATC 4 cut(s) 147, 156, 198, 1333
LguI GCTCTTC 1 cut(s) 977
LmnI GCTCC 5 cut(s) 113, 182, 508, 715, 1253
LweI GCATC 3 cut(s) 768, 1054, 1201
MaeI CTAG 1 cut(s) 566
MaeII ACGT 3 cut(s) 228, 285, 639
MaeIII GTNAC 4 cut(s) 445, 854, 898, 1324
MalI GATC 4 cut(s) 149, 158, 200, 1335
MbiI CCGCTC 1 cut(s) 108
MboI GATC 4 cut(s) 147, 156, 198, 1333
MboII GAAGA 9 cut(s) 151, 395, 420, 423, 808, 994, 1049, 1211, 1285
MfeI CAATTG 1 cut(s) 489
MflI RGATCY 1 cut(s) 156
MhlI GDGCHC 2 cut(s) 608, 693
MlsI TGGCCA 2 cut(s) 545, 920
MluCI AATT 5 cut(s) 489, 588, 624, 657, 1180
MluNI TGGCCA 2 cut(s) 545, 920
Mly113I GGCGCC 2 cut(s) 73, 354
MlyI GAGTC 2 cut(s) 272, 1035
MmeI TCCRAC 2 cut(s) 1056, 1231
Mox20I TGGCCA 2 cut(s) 545, 920
MscI TGGCCA 2 cut(s) 545, 920
MseI TTAA 1 cut(s) 849
MslI CAYNNNNRTG 1 cut(s) 698
Msp20I TGGCCA 2 cut(s) 545, 920
MspA1I CMGCKG 3 cut(s) 443, 707, 929
MspI CCGG 7 cut(s) 609, 654, 698, 750, 832, 953, 1339
MspR9I CCNGG 6 cut(s) 208, 403, 750, 833, 953, 1227
MunI CAATTG 1 cut(s) 489
Mva1269I GAATGC 2 cut(s) 101, 967
MvaI CCWGG 3 cut(s) 208, 403, 1227
NarI GGCGCC 2 cut(s) 73, 354
NciI CCSGG 3 cut(s) 750, 833, 953
NcoI CCATGG 1 cut(s) 68
NdeII GATC 4 cut(s) 147, 156, 198, 1333
NheI GCTAGC 1 cut(s) 565
NlaIII CATG 6 cut(s) 72, 166, 283, 805, 1192, 1246
NlaIV GGNNCC 5 cut(s) 74, 355, 607, 765, 822
NmeAIII GCCGAG 2 cut(s) 421, 712
NmuCI GTSAC 2 cut(s) 854, 898
NotI GCGGCCGC 1 cut(s) 648
NspI RCATGY 1 cut(s) 1192
NspV TTCGAA 1 cut(s) 794
OliI CACNNNNGTG 1 cut(s) 698
PciSI GCTCTTC 1 cut(s) 977
PcsI WCGNNNNNNNCGW 4 cut(s) 258, 318, 333, 378
PctI GAATGC 2 cut(s) 101, 967
PfeI GAWTC 2 cut(s) 307, 1290
PleI GAGTC 2 cut(s) 271, 1035
PluTI GGCGCC 2 cut(s) 76, 357
PpsI GAGTC 2 cut(s) 271, 1035
Psp6I CCWGG 3 cut(s) 206, 401, 1225
PspFI CCCAGC 2 cut(s) 439, 495
PspGI CCWGG 3 cut(s) 206, 401, 1225
PspN4I GGNNCC 5 cut(s) 74, 355, 607, 765, 822
PspPI GGNCC 2 cut(s) 611, 1123
PstI CTGCAG 1 cut(s) 733
PsuI RGATCY 1 cut(s) 156
PvuII CAGCTG 2 cut(s) 443, 929
RsaI GTAC 1 cut(s) 1154
RsaNI GTAC 1 cut(s) 1153
RseI CAYNNNNRTG 1 cut(s) 698
SapI GCTCTTC 1 cut(s) 977
SaqAI TTAA 1 cut(s) 849
Sau3AI GATC 4 cut(s) 147, 156, 198, 1333
Sau96I GGNCC 2 cut(s) 611, 1123
SchI GAGTC 2 cut(s) 272, 1035
ScrFI CCNGG 6 cut(s) 208, 403, 750, 833, 953, 1227
SduI GDGCHC 2 cut(s) 608, 693
SfaNI GCATC 3 cut(s) 768, 1054, 1201
SfcI CTRYAG 1 cut(s) 729
SfiI GGCCNNNNNGGCC 1 cut(s) 618
SfoI GGCGCC 2 cut(s) 74, 355
SfuI TTCGAA 1 cut(s) 794
SmiMI CAYNNNNRTG 1 cut(s) 698
SmlI CTYRAG 1 cut(s) 1373
SmoI CTYRAG 1 cut(s) 1373
Sse9I AATT 5 cut(s) 489, 588, 624, 657, 1180
SspDI GGCGCC 2 cut(s) 72, 353
SspMI CTAG 1 cut(s) 566
StyD4I CCNGG 6 cut(s) 206, 401, 748, 831, 951, 1225
StyI CCWWGG 2 cut(s) 68, 921
TaaI ACNGT 4 cut(s) 136, 760, 854, 1270
TaiI ACGT 3 cut(s) 231, 288, 642
TaqI TCGA 5 cut(s) 261, 585, 794, 807, 864
TaqII GACCGA 2 cut(s) 203, 395
TasI AATT 5 cut(s) 489, 588, 624, 657, 1180
TatI WGTACW 1 cut(s) 1152
TauI GCSGC 6 cut(s) 126, 317, 359, 650, 653, 707
TfiI GAWTC 2 cut(s) 307, 1290
Tru1I TTAA 1 cut(s) 849
Tru9I TTAA 1 cut(s) 849
TscAI CASTG 3 cut(s) 532, 859, 1303
TseFI GTSAC 2 cut(s) 854, 898
Tsp45I GTSAC 2 cut(s) 854, 898
TspDTI ATGAA 2 cut(s) 151, 423
TspGWI ACGGA 1 cut(s) 586
TspRI CASTG 3 cut(s) 532, 859, 1303
XceI RCATGY 1 cut(s) 1192
XcmI CCANNNNNNNNNTGG 1 cut(s) 538
XspI CTAG 1 cut(s) 566
ZraI GACGTC 1 cut(s) 229
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.