Rroxscaffold_5G00376680

acetyltransferase component of pyruvate dehydrogenase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0011790
Physical Location & Seq
Reverse (-)
57332398 .. 57335594
3197 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00376680.1

Sequence Viewer

Length: 1380 bp
ATGGCCTCCTCTCCTTTCCTCTCCAAGCCCACCATTTCATTCTCCTCCTCCGTCTCCACCTCCCTCCCATGTCGCCCCTCCCTCTCCTCCACCGCATTTCGCGCCAACCCCGGCCGCAGAACCCTGACCGTCCAATCCAAGATCAGGGAGATCTTCATGCCCGCCCTCAGCTCCACCATGACCGAGGGCAAGATCGTCTCCTGGATCAAATCCGAGGGCGACGTCCTCTCCAAGGGCGAGAGCGTCGTCGTTGTAGAGTCCGACAAGGCTGATATGGACGTCGAGACTTTCTACGACGGCATCCTCGCCGCGATTGTCGTCGGCGAGGGCGAGACCGCCCCCGTCGGCGCTGCCATCGGAATTCTCGCCGAGACTGAAGCCGAGCTCGATGAGGCCAAGGCTAAAGCCAAAGCCGCCGATTCCGGTGACGCTAATCCCGAGGCCAGTGCCGTTACGCCCACTCCTCCTCCTGCTGCTACTGCCACTCCTGCACCTGCTATAGCGCAGCCTACTCCTGCTGCCACGTCAGCGGCTCCAGCTGGGCCCAGGAAGACTGTGGCTACCCCCTTCGCGAAGAAGCTAGCTAAGCAACACAAGGTGGACATTGCCACCGTCGTCGGCACCGGCCCATTCGGCAGAATTACTCCTGCTGACGTGGAGGCTGCCGCCGGAATTGAGCCGAAGAAAACCGTGGCTGCCGTGCCTACTCCGGCTGCGGCGGCTCCGGCCAAGTCTGCTGCTTCTTCCGCTCCTGCATTGCCTCTACTTCCAGGTTCCACTGTCGTGCCTTTTACCACAATGCAGGCTGCAGTCTCGAAGAACATGATCGAAAGTCTCTCGGTGCCGACGTTCCGGGTGGGCTATCCGGTGAACAGCGATGCCATAGATGCGATGTATGATAAGGTGAAACGAAAGGGCGTGACCATGACTGCCTTGCTTGCCAAGGCGGTTGCTATGGCACTTGCTCAGCACCCGGTTGTGAATGCCAGCTGCAAAGATGGGAAGAGCTTTTACTACAACAGTAGTATAAACATCGCTGTTGCTGTCGCTATTGATGGTGGGCTGATAACCCCTGTTCTTCAGGATGCAGATAAGGTGGATTTGTATTTGTTATCTCAGAAGTGGAAAGAGCTGGTGGAGAAGGCTCGCTCAAAGCAACTTCAGCCCCATGAGTACAACTCAGGTTATACTGAATCCTATGTAGGAACTTTCACTCTCTCCAATTTGGGAATGTTTGGAGTGGACAGATTCGATGCTATTCTTCCTCCAGGCCAGGTGAATGTAACAGCTGATCACCGAATTGTTTATGGAGCTGATTTGGCTGCCTTCCTACAGACATTTGCAAAGATTGTTGAGAACCCAGAAAGCCTGACAATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00010 ko00020 ko00620 ko01100 ko01110 ko01120 ko01130 ko01200 map00010 map00020 map00620 map01100 map01110 map01120 map01130 map01200
Pfam Domains
Protein Families
2-oxoacid_dh Biotin_lipoyl E3_binding

Protein Analysis

459

Amino Acids

47.69

Weight (kDa)

6.17

Isoelectric Point (pI)

43.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Biotin_lipoyl PF00364 50 - 120 3.4e-14 Biotin-requiring enzyme
E3_binding PF02817 186 - 220 1.5e-13 e3 binding domain
2-oxoacid_dh PF00198 259 - 427 2.6e-40 2-oxoacid dehydrogenases acyltransferase (catalytic domain)
2-oxoacid_dh PF00198 426 - 458 2.3e-06 2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011790)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G25860
fragaria_vesca FvH4_4g27580
malus_domestica MD13G1043400.v1.1 MD16G1044200.v1.1
prunus_persica Prupe.1G309100_v2.0.a1
pyrus_communis pycom13g03820 pycom16g03840
rosa_chinensis RchiOBHm_Chr4g0435441
rosa_laevigata RLG00000006592
rosa_multiflora Rmu_sc0008521.1_g000001
rosa_roxburghii Rroxscaffold_5G00376680
rosa_rugosa Rorug04G0285000 Rorug04G0285100 Rorug05G0266800
rosa_samantha Rh4AG340800 Rh4BG349100 Rh4CG363600 Rh4DG343300
rosa_wichuraiana Rw4G029720

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 502
AatII GACGTC 2 cut(s) 225, 282
Acc36I ACCTGC 1 cut(s) 502
AccB1I GGYRCC 2 cut(s) 620, 841
AccBSI CCGCTC 1 cut(s) 749
AccII CGCG 3 cut(s) 102, 311, 572
AclWI GGATC 1 cut(s) 212
AcoI YGGCCR 2 cut(s) 112, 726
AcsI RAATTY 1 cut(s) 360
AcuI CTGAAG 3 cut(s) 396, 1064, 1145
AcyI GRCGYC 2 cut(s) 222, 279
AdeI CACNNNGTG 1 cut(s) 598
AfaI GTAC 1 cut(s) 1175
AfiI CCNNNNNNNGG 2 cut(s) 144, 232
AjiI CACGTC 2 cut(s) 525, 655
AjnI CCWGG 5 cut(s) 200, 545, 769, 1267, 1272
AleI CACNNNNGTG 1 cut(s) 782
Alw21I GWGCWC 1 cut(s) 387
Alw26I GTCTC 7 cut(s) 58, 202, 278, 326, 365, 817, 839
AlwI GGATC 1 cut(s) 212
Ama87I CYCGRG 1 cut(s) 437
AoxI GGCC 8 cut(s) 3, 112, 393, 441, 542, 625, 726, 1270
ApaI GGGCCC 1 cut(s) 546
ApoI RAATTY 1 cut(s) 360
AspLEI GCGC 3 cut(s) 104, 350, 505
AspS9I GGNCC 3 cut(s) 542, 543, 626
AsuC2I CCSGG 3 cut(s) 111, 854, 974
AsuHPI GGTGA 5 cut(s) 437, 880, 916, 1286, 1288
AsuNHI GCTAGC 1 cut(s) 580
AvaI CYCGRG 1 cut(s) 437
BaeGI GKGCMC 1 cut(s) 546
BanI GGYRCC 2 cut(s) 620, 841
BanII GRGCYC 2 cut(s) 387, 546
BarI GAAGNNNNNNTAC 2 cut(s) 995, 1027
BbsI GAAGAC 1 cut(s) 557
Bbv12I GWGCWC 1 cut(s) 387
BbvCI CCTCAGC 1 cut(s) 167
BccI CCATC 3 cut(s) 362, 992, 1049
BceAI ACGGC 3 cut(s) 313, 434, 683
BcgI CGANNNNNNTGC 2 cut(s) 428, 462
BciT130I CCWGG 5 cut(s) 202, 547, 771, 1269, 1274
BclI TGATCA 1 cut(s) 1291
BcnI CCSGG 3 cut(s) 111, 854, 974
BcoDI GTCTC 7 cut(s) 58, 202, 278, 326, 365, 817, 839
BfaI CTAG 1 cut(s) 581
BfmI CTRYAG 3 cut(s) 498, 807, 1331
BfoI RGCGCY 1 cut(s) 351
BfuAI ACCTGC 1 cut(s) 502
BglI GCCNNNNNGGC 1 cut(s) 633
BglII AGATCT 1 cut(s) 150
BlpI GCTNAGC 2 cut(s) 585, 966
Bme1390I CCNGG 8 cut(s) 111, 202, 547, 771, 854, 974, 1269, 1274
BmeT110I CYCGRG 1 cut(s) 437
BmgBI CACGTC 2 cut(s) 525, 655
BmgT120I GGNCC 3 cut(s) 542, 543, 626
BmiI GGNNCC 6 cut(s) 534, 544, 622, 723, 775, 843
BmrFI CCNGG 8 cut(s) 111, 202, 547, 771, 854, 974, 1269, 1274
BmsI GCATC 5 cut(s) 309, 868, 877, 1075, 1243
BmtI GCTAGC 1 cut(s) 584
BpiI GAAGAC 1 cut(s) 557
BplI GAGNNNNNCTC 2 cut(s) 1163, 1195
BpmI CTGGAG 2 cut(s) 519, 1251
Bpu10I CCTNAGC 1 cut(s) 167
Bpu1102I GCTNAGC 2 cut(s) 585, 966
BpuMI CCSGG 3 cut(s) 111, 854, 974
BsaHI GRCGYC 2 cut(s) 222, 279
BsaI GGTCTC 1 cut(s) 326
BsaJI CCNNGG 9 cut(s) 109, 183, 213, 231, 396, 438, 545, 690, 942
BsaWI WCCGGW 2 cut(s) 422, 865
BsaXI ACNNNNNCTCC 8 cut(s) 212, 242, 445, 451, 469, 475, 481, 499
Bsc4I CCNNNNNNNGG 2 cut(s) 144, 232
Bse118I RCCGGY 1 cut(s) 623
Bse1I ACTGG 1 cut(s) 444
Bse3DI GCAATG 2 cut(s) 603, 755
BseBI CCWGG 5 cut(s) 202, 547, 771, 1269, 1274
BseDI CCNNGG 9 cut(s) 109, 183, 213, 231, 396, 438, 545, 690, 942
BseGI GGATG 2 cut(s) 300, 1090
BseLI CCNNNNNNNGG 2 cut(s) 144, 232
BseMI GCAATG 2 cut(s) 603, 755
BseMII CTCAG 4 cut(s) 181, 980, 1130, 1194
BseNI ACTGG 1 cut(s) 444
BseRI GAGGAG 5 cut(s) 34, 37, 76, 453, 456
BseSI GKGCMC 1 cut(s) 546
BseX3I CGGCCG 1 cut(s) 112
BseYI CCCAGC 1 cut(s) 539
BsgI GTGCAG 1 cut(s) 474
Bsh1236I CGCG 3 cut(s) 102, 311, 572
Bsh1285I CGRYCG 1 cut(s) 115
BshFI GGCC 8 cut(s) 5, 114, 395, 443, 544, 627, 728, 1272
BshNI GGYRCC 2 cut(s) 620, 841
BsiEI CGRYCG 1 cut(s) 115
BsiHKAI GWGCWC 1 cut(s) 387
BsiHKCI CYCGRG 1 cut(s) 437
BsiSI CCGG 9 cut(s) 111, 423, 624, 669, 710, 725, 853, 866, 974
BslI CCNNNNNNNGG 2 cut(s) 144, 232
BsmAI GTCTC 7 cut(s) 58, 202, 278, 326, 365, 817, 839
BsmBI CGTCTC 2 cut(s) 58, 202
BsmI GAATGC 1 cut(s) 988
BsnI GGCC 8 cut(s) 5, 114, 395, 443, 544, 627, 728, 1272
Bso31I GGTCTC 1 cut(s) 326
BsoBI CYCGRG 1 cut(s) 437
Bsp120I GGGCCC 1 cut(s) 542
Bsp1286I GDGCHC 2 cut(s) 387, 546
Bsp143I GATC 6 cut(s) 141, 150, 192, 204, 825, 1291
Bsp1720I GCTNAGC 2 cut(s) 585, 966
Bsp68I TCGCGA 1 cut(s) 572
BspANI GGCC 8 cut(s) 5, 114, 395, 443, 544, 627, 728, 1272
BspCNI CTCAG 4 cut(s) 180, 979, 1129, 1193
BspFNI CGCG 3 cut(s) 102, 311, 572
BspLI GGNNCC 6 cut(s) 534, 544, 622, 723, 775, 843
BspMAI CTGCAG 1 cut(s) 811
BspMI ACCTGC 1 cut(s) 502
BspOI GCTAGC 1 cut(s) 584
BspPI GGATC 1 cut(s) 212
BspQI GCTCTTC 1 cut(s) 998
BspT107I GGYRCC 2 cut(s) 620, 841
BspTNI GGTCTC 1 cut(s) 326
BsrBI CCGCTC 1 cut(s) 749
BsrDI GCAATG 2 cut(s) 603, 755
BsrFI RCCGGY 1 cut(s) 623
BsrI ACTGG 1 cut(s) 444
BssAI RCCGGY 1 cut(s) 623
BssECI CCNNGG 9 cut(s) 109, 183, 213, 231, 396, 438, 545, 690, 942
BssMI GATC 6 cut(s) 141, 150, 192, 204, 825, 1291
BssNI GRCGYC 2 cut(s) 222, 279
BssT1I CCWWGG 3 cut(s) 231, 396, 942
Bst2UI CCWGG 5 cut(s) 202, 547, 771, 1269, 1274
Bst4CI ACNGT 6 cut(s) 130, 556, 613, 691, 781, 1022
Bst6I CTCTTC 1 cut(s) 998
BstACI GRCGYC 2 cut(s) 222, 279
BstC8I GCNNGC 6 cut(s) 162, 582, 804, 939, 988, 1147
BstDEI CTNAG 5 cut(s) 167, 585, 966, 1116, 1180
BstDSI CCRYGG 1 cut(s) 690
BstENI CCTNNNNNAGG 1 cut(s) 230
BstF5I GGATG 2 cut(s) 300, 1090
BstFNI CGCG 3 cut(s) 102, 311, 572
BstH2I RGCGCY 1 cut(s) 351
BstHHI GCGC 3 cut(s) 104, 350, 505
BstKTI GATC 6 cut(s) 144, 153, 195, 207, 828, 1294
BstMAI GTCTC 7 cut(s) 58, 202, 278, 326, 365, 817, 839
BstMBI GATC 6 cut(s) 141, 150, 192, 204, 825, 1291
BstMCI CGRYCG 1 cut(s) 115
BstNI CCWGG 5 cut(s) 202, 547, 771, 1269, 1274
BstSCI CCNGG 8 cut(s) 109, 200, 545, 769, 852, 972, 1267, 1272
BstSFI CTRYAG 3 cut(s) 498, 807, 1331
BstSLI GKGCMC 1 cut(s) 546
BstUI CGCG 3 cut(s) 102, 311, 572
BstV2I GAAGAC 1 cut(s) 557
BstX2I RGATCY 1 cut(s) 150
BstYI RGATCY 1 cut(s) 150
BstZI CGGCCG 1 cut(s) 112
BsuRI GGCC 8 cut(s) 5, 114, 395, 443, 544, 627, 728, 1272
BtgI CCRYGG 1 cut(s) 690
BtgZI GCGATG 3 cut(s) 891, 905, 1018
BtrI CACGTC 2 cut(s) 525, 655
BtsCI GGATG 2 cut(s) 300, 1090
BtsIMutI CAGTG 2 cut(s) 451, 777
BtuMI TCGCGA 1 cut(s) 572
BveI ACCTGC 1 cut(s) 502
Cac8I GCNNGC 6 cut(s) 162, 582, 804, 939, 988, 1147
CfoI GCGC 3 cut(s) 104, 350, 505
Cfr10I RCCGGY 1 cut(s) 623
Cfr13I GGNCC 3 cut(s) 542, 543, 626
CseI GACGC 2 cut(s) 232, 437
Csp6I GTAC 1 cut(s) 1174
CviAII CATG 6 cut(s) 69, 157, 178, 823, 925, 1169
CviQI GTAC 1 cut(s) 1174
DdeI CTNAG 5 cut(s) 167, 585, 966, 1116, 1180
DpnI GATC 6 cut(s) 143, 152, 194, 206, 827, 1293
DpnII GATC 6 cut(s) 141, 150, 192, 204, 825, 1291
DraIII CACNNNGTG 1 cut(s) 598
EaeI YGGCCR 2 cut(s) 112, 726
EagI CGGCCG 1 cut(s) 112
Eam1104I CTCTTC 1 cut(s) 998
EarI CTCTTC 1 cut(s) 998
Ecl136II GAGCTC 1 cut(s) 385
EclXI CGGCCG 1 cut(s) 112
Eco130I CCWWGG 3 cut(s) 231, 396, 942
Eco24I GRGCYC 2 cut(s) 387, 546
Eco31I GGTCTC 1 cut(s) 326
Eco52I CGGCCG 1 cut(s) 112
Eco53kI GAGCTC 1 cut(s) 385
Eco57I CTGAAG 3 cut(s) 396, 1064, 1145
Eco88I CYCGRG 1 cut(s) 437
EcoICRI GAGCTC 1 cut(s) 385
EcoNI CCTNNNNNAGG 1 cut(s) 230
EcoRI GAATTC 1 cut(s) 360
EcoRII CCWGG 5 cut(s) 200, 545, 769, 1267, 1272
EcoT14I CCWWGG 3 cut(s) 231, 396, 942
EcoT38I GRGCYC 2 cut(s) 387, 546
ErhI CCWWGG 3 cut(s) 231, 396, 942
Esp3I CGTCTC 2 cut(s) 58, 202
FaeI CATG 6 cut(s) 72, 160, 181, 826, 928, 1172
FatI CATG 6 cut(s) 68, 156, 177, 822, 924, 1168
FauI CCCGC 1 cut(s) 169
FbaI TGATCA 1 cut(s) 1291
FokI GGATG 2 cut(s) 287, 1097
FriOI GRGCYC 2 cut(s) 387, 546
FspBI CTAG 1 cut(s) 581
GlaI GCGC 3 cut(s) 103, 349, 504
GsaI CCCAGC 1 cut(s) 543
GsuI CTGGAG 2 cut(s) 519, 1251
HaeII RGCGCY 1 cut(s) 351
HaeIII GGCC 8 cut(s) 5, 114, 395, 443, 544, 627, 728, 1272
HapII CCGG 9 cut(s) 111, 423, 624, 669, 710, 725, 853, 866, 974
HgaI GACGC 2 cut(s) 232, 437
HhaI GCGC 3 cut(s) 104, 350, 505
Hin1I GRCGYC 2 cut(s) 222, 279
Hin1II CATG 6 cut(s) 72, 160, 181, 826, 928, 1172
Hin6I GCGC 3 cut(s) 102, 348, 503
HinP1I GCGC 3 cut(s) 102, 348, 503
HinfI GANTC 4 cut(s) 257, 419, 1193, 1248
HpaII CCGG 9 cut(s) 111, 423, 624, 669, 710, 725, 853, 866, 974
HphI GGTGA 5 cut(s) 437, 880, 916, 1286, 1288
Hpy166II GTNNAC 3 cut(s) 601, 871, 1243
Hpy188I TCNGA 4 cut(s) 214, 262, 359, 1119
Hpy188III TCNNGA 5 cut(s) 283, 437, 571, 814, 1082
Hpy8I GTNNAC 3 cut(s) 601, 871, 1243
HpyAV CCTTC 3 cut(s) 577, 1135, 1336
HpyCH4III ACNGT 6 cut(s) 130, 556, 613, 691, 781, 1022
HpyCH4IV ACGT 5 cut(s) 222, 279, 524, 654, 848
HpyCH4V TGCA 7 cut(s) 491, 755, 802, 809, 993, 1088, 1343
HpyF3I CTNAG 5 cut(s) 167, 585, 966, 1116, 1180
HpySE526I ACGT 5 cut(s) 222, 279, 524, 654, 848
Hsp92I GRCGYC 2 cut(s) 222, 279
Hsp92II CATG 6 cut(s) 72, 160, 181, 826, 928, 1172
HspAI GCGC 3 cut(s) 102, 348, 503
Ksp22I TGATCA 1 cut(s) 1291
Kzo9I GATC 6 cut(s) 141, 150, 192, 204, 825, 1291
LguI GCTCTTC 1 cut(s) 998
LmnI GCTCC 5 cut(s) 176, 538, 727, 754, 1310
LweI GCATC 5 cut(s) 309, 868, 877, 1075, 1243
MaeI CTAG 1 cut(s) 581
MaeII ACGT 5 cut(s) 222, 279, 524, 654, 848
MaeIII GTNAC 4 cut(s) 425, 451, 919, 1282
MalI GATC 6 cut(s) 143, 152, 194, 206, 827, 1293
MbiI CCGCTC 1 cut(s) 749
MboI GATC 6 cut(s) 141, 150, 192, 204, 825, 1291
MboII GAAGA 9 cut(s) 145, 562, 586, 694, 735, 829, 1015, 1070, 1253
MflI RGATCY 1 cut(s) 150
MhlI GDGCHC 2 cut(s) 387, 546
MluCI AATT 5 cut(s) 360, 639, 672, 1222, 1299
MlyI GAGTC 1 cut(s) 266
MmeI TCCRAC 1 cut(s) 285
MslI CAYNNNNRTG 1 cut(s) 782
MspA1I CMGCKG 4 cut(s) 530, 539, 990, 1289
MspI CCGG 9 cut(s) 111, 423, 624, 669, 710, 725, 853, 866, 974
MspR9I CCNGG 8 cut(s) 111, 202, 547, 771, 854, 974, 1269, 1274
Mva1269I GAATGC 1 cut(s) 988
MvaI CCWGG 5 cut(s) 202, 547, 771, 1269, 1274
MvnI CGCG 3 cut(s) 102, 311, 572
NciI CCSGG 3 cut(s) 111, 854, 974
NdeII GATC 6 cut(s) 141, 150, 192, 204, 825, 1291
NheI GCTAGC 1 cut(s) 580
NlaIII CATG 6 cut(s) 72, 160, 181, 826, 928, 1172
NlaIV GGNNCC 6 cut(s) 534, 544, 622, 723, 775, 843
NmeAIII GCCGAG 2 cut(s) 394, 406
NmuCI GTSAC 2 cut(s) 425, 919
NruI TCGCGA 1 cut(s) 572
OliI CACNNNNGTG 1 cut(s) 782
PaqCI CACCTGC 1 cut(s) 502
PciSI GCTCTTC 1 cut(s) 998
PcsI WCGNNNNNNNCGW 3 cut(s) 327, 435, 845
PctI GAATGC 1 cut(s) 988
PfeI GAWTC 3 cut(s) 419, 1193, 1248
PfoI TCCNGGA 1 cut(s) 200
PleI GAGTC 1 cut(s) 265
PpsI GAGTC 1 cut(s) 265
Psp124BI GAGCTC 1 cut(s) 387
Psp6I CCWGG 5 cut(s) 200, 545, 769, 1267, 1272
PspFI CCCAGC 1 cut(s) 539
PspGI CCWGG 5 cut(s) 200, 545, 769, 1267, 1272
PspN4I GGNNCC 6 cut(s) 534, 544, 622, 723, 775, 843
PspOMI GGGCCC 1 cut(s) 542
PspPI GGNCC 3 cut(s) 542, 543, 626
PstI CTGCAG 1 cut(s) 811
PsuI RGATCY 1 cut(s) 150
PvuII CAGCTG 3 cut(s) 539, 990, 1289
RruI TCGCGA 1 cut(s) 572
RsaI GTAC 1 cut(s) 1175
RsaNI GTAC 1 cut(s) 1174
RseI CAYNNNNRTG 1 cut(s) 782
SacI GAGCTC 1 cut(s) 387
SapI GCTCTTC 1 cut(s) 998
Sau3AI GATC 6 cut(s) 141, 150, 192, 204, 825, 1291
Sau96I GGNCC 3 cut(s) 542, 543, 626
SchI GAGTC 1 cut(s) 266
ScrFI CCNGG 8 cut(s) 111, 202, 547, 771, 854, 974, 1269, 1274
SduI GDGCHC 2 cut(s) 387, 546
SfaNI GCATC 5 cut(s) 309, 868, 877, 1075, 1243
SfcI CTRYAG 3 cut(s) 498, 807, 1331
SmiMI CAYNNNNRTG 1 cut(s) 782
Sse9I AATT 5 cut(s) 360, 639, 672, 1222, 1299
SspMI CTAG 1 cut(s) 581
SstI GAGCTC 1 cut(s) 387
StyD4I CCNGG 8 cut(s) 109, 200, 545, 769, 852, 972, 1267, 1272
StyI CCWWGG 3 cut(s) 231, 396, 942
TaaI ACNGT 6 cut(s) 130, 556, 613, 691, 781, 1022
TaiI ACGT 5 cut(s) 225, 282, 527, 657, 851
TaqI TCGA 5 cut(s) 282, 387, 815, 828, 1251
TaqII GACCGA 1 cut(s) 197
TasI AATT 5 cut(s) 360, 639, 672, 1222, 1299
TatI WGTACW 1 cut(s) 1173
TauI GCSGC 7 cut(s) 117, 311, 416, 533, 668, 719, 722
TfiI GAWTC 3 cut(s) 419, 1193, 1248
TscAI CASTG 2 cut(s) 451, 784
TseFI GTSAC 2 cut(s) 425, 919
Tsp45I GTSAC 2 cut(s) 425, 919
TspDTI ATGAA 2 cut(s) 27, 145
TspGWI ACGGA 1 cut(s) 40
TspRI CASTG 2 cut(s) 451, 784
XagI CCTNNNNNAGG 1 cut(s) 230
XapI RAATTY 1 cut(s) 360
XcmI CCANNNNNNNNNTGG 1 cut(s) 553
XspI CTAG 1 cut(s) 581
ZraI GACGTC 2 cut(s) 223, 280
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.