RLG00000006592

acetyltransferase component of pyruvate dehydrogenase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0011790
Physical Location & Seq
Forward (+)
8772395 .. 8775017
2623 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000006592

Sequence Viewer

Length: 1440 bp
ATGGCCTCCTCTCCTTTCCTCTCCAAGCCCACCATTTCATTCTCCTCCTCCGTCTCCACTTCCCTCCCATGGCGCCCCTCCCTCTCCTCCACCGCATTTCGCGCCAACCCCCGCCGCAGAACCCTGACCGTCCAATCCAAGATCAGGGAGATCTTCATGCCCGCCCTCAGCTCCACCATGACCGAGGGCAAGATCGTCTCCTGGATCAAGTCCGAGGGCGACGTCCTCTCCAAAGGCGAGAGCGTCGTCGTTGTAGAGTCCGATAAGGCTGATATGGACGTCGAGACTTTCTACGACGGAATCCTCGCCGCGATTGTCGTCGGCGAGGGCGAGACCGCCCCCGTCGGCGCCGCCATCGGAATTCTCGCCGAGACTGAAGCCGAGCTCGATGAGGCCAAGGCTAAAGCCAAAGCCGCCGATTCCGGTGCCGCTAAGCCCGAGGCCAGTGCCGTTACGCCCACTCCTCCTCCTGCTACTGCCACTCCTGCACCTGCTATAGCGCAGCCTCCTCCTGCTGCCACGTCAGCGGCTCCAGCTGAGCCCAGGAAGACTGTGGCTACCCCCTTTGCGAAGAAGCTGGCTAAGCAACACAAGGTGGACATTGCCACCGTCGTGGGCACCGGCCCATTCGGCAGAATTACTCCTGCTGACGTGGAGGCTGCCGCCGGAATTGAGCCGAAGAAAACCGTGGCCGCCGTGCCTACTCCGGCTGCGGCGGCTCCGGCCAAGTCTGCTGCTTCTTCCGCTCCTGCATTGCCTCTACTTCCAGGTTCCACTGTCGTGCCTTTCACCACAATGCAGGCTGCAGTCTCGAAGAACATGATTGAAAGTCTTTCGGTGCCGACGTTCCGGGTGGGCTATCCGGTGAACAGCGATGCCATAGATGCGATGTATGATAAGGTGAAACGAAAGGGCGTGACCATGACTGCCTTGCTTGCCAAGGCGGTTGCTATGGCACTTGCTCAGCACCCGGTTGTGAATGCCAGCTGCAAAGATGGGAAGAGCTTTTACTACAACAGTAGCATAAACATCGCTGTTGCTGTGGCTATTGATGGTGGGCTGATAACCCCTGTTCTTCAGGATGCAGATAAGGTGGATTTGTATTTGTTATCTCAGAAGTGGAAAGAGCTGGTGGAGAAGGCTCGCTCAAAGCAACTTCAGCCCCATGAGTACAACTCAGGAACTTTCACTCTTTCCAATTTGGGAATGTTTGGAGTGGACAGATTCGATGCTATTCTTCCTCCTGGCCAGGGTGCTATCATGGCTGTTGGAGCTTCAAAACCCACAGTTGTAGCTGATGCTGACGGATTCTTCAGTGTAAAAAGTAAAATGCTGGTGAATGTAACAGCTGATCACCGAATTGTTTATGGAGCTGATTTGGCTGCCTTCCTACAGACATTTGCAAAGATTGTTGAGAACCCAGAAAGCCTGACAATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00010 ko00020 ko00620 ko01100 ko01110 ko01120 ko01130 ko01200 map00010 map00020 map00620 map01100 map01110 map01120 map01130 map01200
Pfam Domains
Protein Families
2-oxoacid_dh Biotin_lipoyl E3_binding

Protein Analysis

480

Amino Acids

49.82

Weight (kDa)

8.33

Isoelectric Point (pI)

44.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Biotin_lipoyl PF00364 50 - 120 3.7e-14 Biotin-requiring enzyme
E3_binding PF02817 185 - 219 1.6e-13 e3 binding domain
2-oxoacid_dh PF00198 258 - 478 8.1e-64 2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011790)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G25860
fragaria_vesca FvH4_4g27580
malus_domestica MD13G1043400.v1.1 MD16G1044200.v1.1
prunus_persica Prupe.1G309100_v2.0.a1
pyrus_communis pycom13g03820 pycom16g03840
rosa_chinensis RchiOBHm_Chr4g0435441
rosa_laevigata RLG00000006592
rosa_multiflora Rmu_sc0008521.1_g000001
rosa_roxburghii Rroxscaffold_5G00376680
rosa_rugosa Rorug04G0285000 Rorug04G0285100 Rorug05G0266800
rosa_samantha Rh4AG340800 Rh4BG349100 Rh4CG363600 Rh4DG343300
rosa_wichuraiana Rw4G029720

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 499
AatII GACGTC 2 cut(s) 225, 282
Acc36I ACCTGC 1 cut(s) 499
AccB1I GGYRCC 5 cut(s) 72, 347, 425, 617, 838
AccBSI CCGCTC 1 cut(s) 746
AccII CGCG 2 cut(s) 102, 311
AclWI GGATC 1 cut(s) 212
AcoI YGGCCR 3 cut(s) 690, 723, 1246
AcsI RAATTY 1 cut(s) 360
AcuI CTGAAG 4 cut(s) 396, 1061, 1142, 1297
AcyI GRCGYC 4 cut(s) 73, 222, 279, 348
AdeI CACNNNGTG 1 cut(s) 595
AfaI GTAC 1 cut(s) 1172
AfiI CCNNNNNNNGG 3 cut(s) 69, 144, 1250
AgsI TTSAA 2 cut(s) 827, 1278
AjiI CACGTC 2 cut(s) 522, 652
AjnI CCWGG 5 cut(s) 200, 542, 766, 1243, 1248
AleI CACNNNNGTG 2 cut(s) 611, 779
Alw21I GWGCWC 1 cut(s) 387
Alw26I GTCTC 6 cut(s) 58, 202, 278, 326, 365, 814
AlwI GGATC 1 cut(s) 212
Ama87I CYCGRG 1 cut(s) 437
AoxI GGCC 7 cut(s) 3, 393, 441, 622, 690, 723, 1246
ApeKI GCWGC 8 cut(s) 502, 515, 659, 710, 734, 803, 987, 1382
ApoI RAATTY 1 cut(s) 360
AspLEI GCGC 4 cut(s) 75, 104, 350, 502
AspS9I GGNCC 1 cut(s) 623
AsuC2I CCSGG 2 cut(s) 851, 971
AsuHPI GGTGA 5 cut(s) 781, 877, 913, 1346, 1348
AvaI CYCGRG 1 cut(s) 437
BaeGI GKGCMC 1 cut(s) 620
BalI TGGCCA 1 cut(s) 1248
BanI GGYRCC 5 cut(s) 72, 347, 425, 617, 838
BanII GRGCYC 2 cut(s) 387, 543
BarI GAAGNNNNNNTAC 2 cut(s) 992, 1024
BbsI GAAGAC 1 cut(s) 554
Bbv12I GWGCWC 1 cut(s) 387
BbvCI CCTCAGC 1 cut(s) 167
BbvI GCAGC 8 cut(s) 502, 514, 646, 697, 721, 790, 974, 1369
BccI CCATC 3 cut(s) 362, 989, 1046
BceAI ACGGC 2 cut(s) 434, 680
BcgI CGANNNNNNTGC 6 cut(s) 407, 428, 441, 462, 1012, 1046
BciT130I CCWGG 5 cut(s) 202, 544, 768, 1245, 1250
BclI TGATCA 1 cut(s) 1351
BcnI CCSGG 2 cut(s) 851, 971
BcoDI GTCTC 6 cut(s) 58, 202, 278, 326, 365, 814
BfmI CTRYAG 3 cut(s) 495, 804, 1391
BfoI RGCGCY 2 cut(s) 76, 351
BfuAI ACCTGC 1 cut(s) 499
BglI GCCNNNNNGGC 1 cut(s) 630
BglII AGATCT 1 cut(s) 150
BlpI GCTNAGC 4 cut(s) 432, 537, 582, 963
Bme1390I CCNGG 7 cut(s) 202, 544, 768, 851, 971, 1245, 1250
BmeT110I CYCGRG 1 cut(s) 437
BmgBI CACGTC 2 cut(s) 522, 652
BmgT120I GGNCC 1 cut(s) 623
BmiI GGNNCC 8 cut(s) 74, 349, 427, 531, 619, 720, 772, 840
BmrFI CCNGG 7 cut(s) 202, 544, 768, 851, 971, 1245, 1250
BmsI GCATC 5 cut(s) 865, 874, 1072, 1219, 1288
BpiI GAAGAC 1 cut(s) 554
BplI GAGNNNNNCTC 2 cut(s) 1160, 1192
BpmI CTGGAG 1 cut(s) 516
Bpu10I CCTNAGC 1 cut(s) 167
Bpu1102I GCTNAGC 4 cut(s) 432, 537, 582, 963
BpuMI CCSGG 2 cut(s) 851, 971
BsaHI GRCGYC 4 cut(s) 73, 222, 279, 348
BsaI GGTCTC 1 cut(s) 326
BsaJI CCNNGG 9 cut(s) 68, 183, 213, 396, 438, 542, 687, 939, 1249
BsaWI WCCGGW 2 cut(s) 422, 862
BsaXI ACNNNNNCTCC 8 cut(s) 212, 242, 445, 451, 466, 475, 481, 496
Bsc4I CCNNNNNNNGG 3 cut(s) 69, 144, 1250
Bse118I RCCGGY 1 cut(s) 620
Bse1I ACTGG 1 cut(s) 444
Bse3DI GCAATG 2 cut(s) 600, 752
BseBI CCWGG 5 cut(s) 202, 544, 768, 1245, 1250
BseDI CCNNGG 9 cut(s) 68, 183, 213, 396, 438, 542, 687, 939, 1249
BseGI GGATG 1 cut(s) 1087
BseLI CCNNNNNNNGG 3 cut(s) 69, 144, 1250
BseMI GCAATG 2 cut(s) 600, 752
BseMII CTCAG 5 cut(s) 181, 528, 977, 1127, 1191
BseNI ACTGG 1 cut(s) 444
BseRI GAGGAG 6 cut(s) 34, 37, 76, 453, 456, 498
BseSI GKGCMC 1 cut(s) 620
BseXI GCAGC 8 cut(s) 502, 514, 646, 697, 721, 790, 974, 1369
BsgI GTGCAG 1 cut(s) 471
Bsh1236I CGCG 2 cut(s) 102, 311
BshFI GGCC 7 cut(s) 5, 395, 443, 624, 692, 725, 1248
BshNI GGYRCC 5 cut(s) 72, 347, 425, 617, 838
BsiHKAI GWGCWC 1 cut(s) 387
BsiHKCI CYCGRG 1 cut(s) 437
BsiSI CCGG 8 cut(s) 423, 621, 666, 707, 722, 850, 863, 971
BslI CCNNNNNNNGG 3 cut(s) 69, 144, 1250
BsmAI GTCTC 6 cut(s) 58, 202, 278, 326, 365, 814
BsmBI CGTCTC 2 cut(s) 58, 202
BsmI GAATGC 1 cut(s) 985
BsnI GGCC 7 cut(s) 5, 395, 443, 624, 692, 725, 1248
Bso31I GGTCTC 1 cut(s) 326
BsoBI CYCGRG 1 cut(s) 437
Bsp1286I GDGCHC 3 cut(s) 387, 543, 620
Bsp143I GATC 5 cut(s) 141, 150, 192, 204, 1351
Bsp1720I GCTNAGC 4 cut(s) 432, 537, 582, 963
Bsp19I CCATGG 1 cut(s) 68
BspANI GGCC 7 cut(s) 5, 395, 443, 624, 692, 725, 1248
BspCNI CTCAG 5 cut(s) 180, 529, 976, 1126, 1190
BspFNI CGCG 2 cut(s) 102, 311
BspLI GGNNCC 8 cut(s) 74, 349, 427, 531, 619, 720, 772, 840
BspMAI CTGCAG 1 cut(s) 808
BspMI ACCTGC 1 cut(s) 499
BspPI GGATC 1 cut(s) 212
BspQI GCTCTTC 1 cut(s) 995
BspT107I GGYRCC 5 cut(s) 72, 347, 425, 617, 838
BspTNI GGTCTC 1 cut(s) 326
BsrBI CCGCTC 1 cut(s) 746
BsrDI GCAATG 2 cut(s) 600, 752
BsrFI RCCGGY 1 cut(s) 620
BsrI ACTGG 1 cut(s) 444
BssAI RCCGGY 1 cut(s) 620
BssECI CCNNGG 9 cut(s) 68, 183, 213, 396, 438, 542, 687, 939, 1249
BssMI GATC 5 cut(s) 141, 150, 192, 204, 1351
BssNI GRCGYC 4 cut(s) 73, 222, 279, 348
BssT1I CCWWGG 3 cut(s) 68, 396, 939
Bst2UI CCWGG 5 cut(s) 202, 544, 768, 1245, 1250
Bst4CI ACNGT 7 cut(s) 130, 553, 610, 688, 778, 1019, 1288
Bst6I CTCTTC 1 cut(s) 995
BstACI GRCGYC 4 cut(s) 73, 222, 279, 348
BstC8I GCNNGC 6 cut(s) 162, 579, 801, 936, 985, 1144
BstDEI CTNAG 7 cut(s) 167, 432, 537, 582, 963, 1113, 1177
BstDSI CCRYGG 2 cut(s) 68, 687
BstF5I GGATG 1 cut(s) 1087
BstFNI CGCG 2 cut(s) 102, 311
BstH2I RGCGCY 2 cut(s) 76, 351
BstHHI GCGC 4 cut(s) 75, 104, 350, 502
BstKTI GATC 5 cut(s) 144, 153, 195, 207, 1354
BstMAI GTCTC 6 cut(s) 58, 202, 278, 326, 365, 814
BstMBI GATC 5 cut(s) 141, 150, 192, 204, 1351
BstNI CCWGG 5 cut(s) 202, 544, 768, 1245, 1250
BstSCI CCNGG 7 cut(s) 200, 542, 766, 849, 969, 1243, 1248
BstSFI CTRYAG 3 cut(s) 495, 804, 1391
BstSLI GKGCMC 1 cut(s) 620
BstUI CGCG 2 cut(s) 102, 311
BstV1I GCAGC 8 cut(s) 502, 514, 646, 697, 721, 790, 974, 1369
BstV2I GAAGAC 1 cut(s) 554
BstX2I RGATCY 1 cut(s) 150
BstXI CCANNNNNNTGG 1 cut(s) 613
BstYI RGATCY 1 cut(s) 150
BsuRI GGCC 7 cut(s) 5, 395, 443, 624, 692, 725, 1248
BtgI CCRYGG 2 cut(s) 68, 687
BtgZI GCGATG 3 cut(s) 888, 902, 1015
BtrI CACGTC 2 cut(s) 522, 652
BtsCI GGATG 1 cut(s) 1087
BtsIMutI CAGTG 3 cut(s) 451, 774, 1321
BveI ACCTGC 1 cut(s) 499
Cac8I GCNNGC 6 cut(s) 162, 579, 801, 936, 985, 1144
CfoI GCGC 4 cut(s) 75, 104, 350, 502
Cfr10I RCCGGY 1 cut(s) 620
Cfr13I GGNCC 1 cut(s) 623
CseI GACGC 1 cut(s) 232
Csp6I GTAC 1 cut(s) 1171
CviAII CATG 7 cut(s) 69, 157, 178, 820, 922, 1166, 1261
CviQI GTAC 1 cut(s) 1171
DdeI CTNAG 7 cut(s) 167, 432, 537, 582, 963, 1113, 1177
DinI GGCGCC 2 cut(s) 74, 349
DpnI GATC 5 cut(s) 143, 152, 194, 206, 1353
DpnII GATC 5 cut(s) 141, 150, 192, 204, 1351
DraIII CACNNNGTG 1 cut(s) 595
EaeI YGGCCR 3 cut(s) 690, 723, 1246
Eam1104I CTCTTC 1 cut(s) 995
EarI CTCTTC 1 cut(s) 995
Ecl136II GAGCTC 1 cut(s) 385
Eco130I CCWWGG 3 cut(s) 68, 396, 939
Eco24I GRGCYC 2 cut(s) 387, 543
Eco31I GGTCTC 1 cut(s) 326
Eco53kI GAGCTC 1 cut(s) 385
Eco57I CTGAAG 4 cut(s) 396, 1061, 1142, 1297
Eco88I CYCGRG 1 cut(s) 437
EcoICRI GAGCTC 1 cut(s) 385
EcoRI GAATTC 1 cut(s) 360
EcoRII CCWGG 5 cut(s) 200, 542, 766, 1243, 1248
EcoT14I CCWWGG 3 cut(s) 68, 396, 939
EcoT38I GRGCYC 2 cut(s) 387, 543
EgeI GGCGCC 2 cut(s) 74, 349
EheI GGCGCC 2 cut(s) 74, 349
ErhI CCWWGG 3 cut(s) 68, 396, 939
Esp3I CGTCTC 2 cut(s) 58, 202
FaeI CATG 7 cut(s) 72, 160, 181, 823, 925, 1169, 1264
FatI CATG 7 cut(s) 68, 156, 177, 819, 921, 1165, 1260
FauI CCCGC 2 cut(s) 119, 169
FbaI TGATCA 1 cut(s) 1351
FokI GGATG 1 cut(s) 1094
FriOI GRGCYC 2 cut(s) 387, 543
GlaI GCGC 4 cut(s) 74, 103, 349, 501
GsuI CTGGAG 1 cut(s) 516
HaeII RGCGCY 2 cut(s) 76, 351
HaeIII GGCC 7 cut(s) 5, 395, 443, 624, 692, 725, 1248
HapII CCGG 8 cut(s) 423, 621, 666, 707, 722, 850, 863, 971
HgaI GACGC 1 cut(s) 232
HhaI GCGC 4 cut(s) 75, 104, 350, 502
Hin1I GRCGYC 4 cut(s) 73, 222, 279, 348
Hin1II CATG 7 cut(s) 72, 160, 181, 823, 925, 1169, 1264
Hin6I GCGC 4 cut(s) 73, 102, 348, 500
HinP1I GCGC 4 cut(s) 73, 102, 348, 500
HinfI GANTC 5 cut(s) 257, 300, 419, 1224, 1308
HpaII CCGG 8 cut(s) 423, 621, 666, 707, 722, 850, 863, 971
HphI GGTGA 5 cut(s) 781, 877, 913, 1346, 1348
Hpy166II GTNNAC 3 cut(s) 598, 868, 1219
Hpy188I TCNGA 4 cut(s) 214, 262, 359, 1116
Hpy188III TCNNGA 4 cut(s) 283, 811, 1079, 1179
Hpy8I GTNNAC 3 cut(s) 598, 868, 1219
Hpy99I CGWCG 9 cut(s) 224, 248, 251, 284, 299, 323, 347, 614, 847
HpyAV CCTTC 2 cut(s) 1132, 1396
HpyCH4III ACNGT 7 cut(s) 130, 553, 610, 688, 778, 1019, 1288
HpyCH4IV ACGT 5 cut(s) 222, 279, 521, 651, 845
HpyCH4V TGCA 7 cut(s) 488, 752, 799, 806, 990, 1085, 1403
HpyF3I CTNAG 7 cut(s) 167, 432, 537, 582, 963, 1113, 1177
HpySE526I ACGT 5 cut(s) 222, 279, 521, 651, 845
Hsp92I GRCGYC 4 cut(s) 73, 222, 279, 348
Hsp92II CATG 7 cut(s) 72, 160, 181, 823, 925, 1169, 1264
HspAI GCGC 4 cut(s) 73, 102, 348, 500
KasI GGCGCC 2 cut(s) 72, 347
Ksp22I TGATCA 1 cut(s) 1351
Kzo9I GATC 5 cut(s) 141, 150, 192, 204, 1351
LguI GCTCTTC 1 cut(s) 995
LmnI GCTCC 6 cut(s) 176, 535, 724, 751, 1271, 1370
Lsp1109I GCAGC 8 cut(s) 502, 514, 646, 697, 721, 790, 974, 1369
LweI GCATC 5 cut(s) 865, 874, 1072, 1219, 1288
MaeII ACGT 5 cut(s) 222, 279, 521, 651, 845
MaeIII GTNAC 3 cut(s) 451, 916, 1342
MalI GATC 5 cut(s) 143, 152, 194, 206, 1353
MbiI CCGCTC 1 cut(s) 746
MboI GATC 5 cut(s) 141, 150, 192, 204, 1351
MflI RGATCY 1 cut(s) 150
MhlI GDGCHC 3 cut(s) 387, 543, 620
MlsI TGGCCA 1 cut(s) 1248
MluCI AATT 5 cut(s) 360, 636, 669, 1198, 1359
MluNI TGGCCA 1 cut(s) 1248
Mly113I GGCGCC 2 cut(s) 73, 348
MlyI GAGTC 1 cut(s) 266
MmeI TCCRAC 1 cut(s) 1249
Mox20I TGGCCA 1 cut(s) 1248
MscI TGGCCA 1 cut(s) 1248
MslI CAYNNNNRTG 3 cut(s) 611, 779, 794
Msp20I TGGCCA 1 cut(s) 1248
MspA1I CMGCKG 4 cut(s) 527, 536, 987, 1349
MspI CCGG 8 cut(s) 423, 621, 666, 707, 722, 850, 863, 971
MspR9I CCNGG 7 cut(s) 202, 544, 768, 851, 971, 1245, 1250
Mva1269I GAATGC 1 cut(s) 985
MvaI CCWGG 5 cut(s) 202, 544, 768, 1245, 1250
MvnI CGCG 2 cut(s) 102, 311
NarI GGCGCC 2 cut(s) 73, 348
NciI CCSGG 2 cut(s) 851, 971
NcoI CCATGG 1 cut(s) 68
NdeII GATC 5 cut(s) 141, 150, 192, 204, 1351
NlaIII CATG 7 cut(s) 72, 160, 181, 823, 925, 1169, 1264
NlaIV GGNNCC 8 cut(s) 74, 349, 427, 531, 619, 720, 772, 840
NmeAIII GCCGAG 2 cut(s) 394, 406
NmuCI GTSAC 1 cut(s) 916
OliI CACNNNNGTG 2 cut(s) 611, 779
PaqCI CACCTGC 1 cut(s) 499
PciSI GCTCTTC 1 cut(s) 995
PcsI WCGNNNNNNNCGW 2 cut(s) 327, 842
PctI GAATGC 1 cut(s) 985
PfeI GAWTC 4 cut(s) 300, 419, 1224, 1308
PfoI TCCNGGA 1 cut(s) 200
PleI GAGTC 1 cut(s) 265
PluTI GGCGCC 2 cut(s) 76, 351
PpsI GAGTC 1 cut(s) 265
Psp124BI GAGCTC 1 cut(s) 387
Psp6I CCWGG 5 cut(s) 200, 542, 766, 1243, 1248
PspGI CCWGG 5 cut(s) 200, 542, 766, 1243, 1248
PspN4I GGNNCC 8 cut(s) 74, 349, 427, 531, 619, 720, 772, 840
PspPI GGNCC 1 cut(s) 623
PstI CTGCAG 1 cut(s) 808
PsuI RGATCY 1 cut(s) 150
PvuII CAGCTG 3 cut(s) 536, 987, 1349
RsaI GTAC 1 cut(s) 1172
RsaNI GTAC 1 cut(s) 1171
RseI CAYNNNNRTG 3 cut(s) 611, 779, 794
SacI GAGCTC 1 cut(s) 387
SapI GCTCTTC 1 cut(s) 995
Sau3AI GATC 5 cut(s) 141, 150, 192, 204, 1351
Sau96I GGNCC 1 cut(s) 623
SchI GAGTC 1 cut(s) 266
ScrFI CCNGG 7 cut(s) 202, 544, 768, 851, 971, 1245, 1250
SduI GDGCHC 3 cut(s) 387, 543, 620
SfaNI GCATC 5 cut(s) 865, 874, 1072, 1219, 1288
SfcI CTRYAG 3 cut(s) 495, 804, 1391
SfoI GGCGCC 2 cut(s) 74, 349
SmiMI CAYNNNNRTG 3 cut(s) 611, 779, 794
Sse9I AATT 5 cut(s) 360, 636, 669, 1198, 1359
SspDI GGCGCC 2 cut(s) 72, 347
SstI GAGCTC 1 cut(s) 387
StyD4I CCNGG 7 cut(s) 200, 542, 766, 849, 969, 1243, 1248
StyI CCWWGG 3 cut(s) 68, 396, 939
TaaI ACNGT 7 cut(s) 130, 553, 610, 688, 778, 1019, 1288
TaiI ACGT 5 cut(s) 225, 282, 524, 654, 848
TaqI TCGA 4 cut(s) 282, 387, 812, 1227
TaqII GACCGA 1 cut(s) 197
TasI AATT 5 cut(s) 360, 636, 669, 1198, 1359
TatI WGTACW 1 cut(s) 1170
TfiI GAWTC 4 cut(s) 300, 419, 1224, 1308
TscAI CASTG 3 cut(s) 451, 781, 1321
TseFI GTSAC 1 cut(s) 916
TseI GCWGC 8 cut(s) 502, 515, 659, 710, 734, 803, 987, 1382
Tsp45I GTSAC 1 cut(s) 916
TspDTI ATGAA 2 cut(s) 27, 145
TspGWI ACGGA 3 cut(s) 40, 312, 1320
TspRI CASTG 3 cut(s) 451, 781, 1321
XapI RAATTY 1 cut(s) 360
XcmI CCANNNNNNNNNTGG 1 cut(s) 550
ZraI GACGTC 2 cut(s) 223, 280
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.