Rh4BG349100

acetyltransferase component of pyruvate dehydrogenase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
OG0011790
Physical Location & Seq
Reverse (-)
51119942 .. 51122845
2904 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG349100.1

Sequence Viewer

Length: 1293 bp
ATGGCCTCCTCTCCTTTCCTCTCCAAGCCCACCATTTCATTCTCCTCCTCCGTCTCCACCTCCCTCCCATGGCGCCCCTCCCTCTCCTCCACCGCATTCCGCTCCAACCCCCGCCGCAGAACCCTGACCGTCCAATCCAAGATCAGGGAGATCTTCATGCCCGCCCTCAGCTCCACCATGACCGAGGGCAAGATCGTCTCCTGGATCAAATCCGAGGGCGACGTCCTCTCCAAGGGCGAGAGCGTCGTCGTTGTAGAGTCCGACAAGGCTGATATGGACGTCGAGACTTTCTACGACGGCATCCTCGCCGCGATTGTCGTCGGCGAGGGCGAGACCGCCCCCGTCGGCGCCGCCATCGGAATTCTCGCCGAGACTGAAGCCGAGCTCGGTGAGGCCAAGGCTAAAGCCAAAGCCGCCGATTCCGGTGCCGCTAAGCCCGAGGCCAGTGCCGTTACGCCCACTCCTCCTCCTGCTACTGCCACTCCCGCACCTGCTATTGCGCAGCCTCCTCCTGCTGCCACGTCAGCGACTCCAGCTGGGCCCAGGAAGACTGTGGCTACTCCCTTCGCGAAGAAGCTAGCTAAGCAACACAAGGTGGACATTGCCACCGTCGTGGGCACCGGCCCATTCGGCAGAATTACTCCTGCTGACGTGGAGGCTGCCGCCGGAATTGAGCCGAAGAAAACCGTGGCTGCCGTGCCTACTCCGGCTGCGGCGGCTCCGGCCAAGTCTGCTGCTTCTTCCGCTCCTGCATTGCCTCTACTTCCAGGTTCCACTGTCGTGCCTTTCACCACAATGCAGGCTGCAGTCTCGAAGAATATGATCGAAAGTCTCTCGGTGCCGACGTTCCGGGTGGGCTATCCGGTGAACAGCGATGCCATAGATGCGATGTATGATAAGGTGAAACGAAGGGGCGTGACCATGACTGCCTTGCTTGCCAAGGCGGTTGCTATGGCACTTGCTCAGCACCCGGTTGTGAATGCCAGCTGCAAAGATGGGAAGAGCTTTTACTACAACAGTAGCATAAACATCGCCGTTGCTGTGGCTATTGATGGTGGGCTGATAACCCCTGTTCTTCAGGATGCAGATAAGGTGGATTTGTATTTGTTATCTCAGAAGTGGAAAGAGCTGGTGGAGAAGGCTCGCTCAAAGCAACTTCAGCCCCATGAGTACAACTCAGGAACTTTCACTCTCTCCAATTTGGGAATGTTTGGAGTGGACAGATTCGATGCTATTCTTCCTCCAGGCCAGGTGAGTTTTAGCCATCAAACTAGGAATTTGCACTTTCATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00010 ko00020 ko00620 ko01100 ko01110 ko01120 ko01130 ko01200 map00010 map00020 map00620 map01100 map01110 map01120 map01130 map01200
Pfam Domains
Protein Families
2-oxoacid_dh Biotin_lipoyl E3_binding

Protein Analysis

430

Amino Acids

44.86

Weight (kDa)

9.14

Isoelectric Point (pI)

49.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Biotin_lipoyl PF00364 50 - 120 3.1e-14 Biotin-requiring enzyme
E3_binding PF02817 185 - 219 1.4e-13 e3 binding domain
2-oxoacid_dh PF00198 258 - 419 4.2e-44 2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011790)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G25860
fragaria_vesca FvH4_4g27580
malus_domestica MD13G1043400.v1.1 MD16G1044200.v1.1
prunus_persica Prupe.1G309100_v2.0.a1
pyrus_communis pycom13g03820 pycom16g03840
rosa_chinensis RchiOBHm_Chr4g0435441
rosa_laevigata RLG00000006592
rosa_multiflora Rmu_sc0008521.1_g000001
rosa_roxburghii Rroxscaffold_5G00376680
rosa_rugosa Rorug04G0285000 Rorug04G0285100 Rorug05G0266800
rosa_samantha Rh4AG340800 Rh4BG349100 Rh4CG363600 Rh4DG343300
rosa_wichuraiana Rw4G029720

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 499
AatII GACGTC 2 cut(s) 225, 282
Acc16I TGCGCA 1 cut(s) 501
Acc36I ACCTGC 1 cut(s) 499
AccB1I GGYRCC 5 cut(s) 72, 347, 425, 617, 838
AccBSI CCGCTC 2 cut(s) 102, 746
AccII CGCG 2 cut(s) 311, 569
AclWI GGATC 1 cut(s) 212
AcoI YGGCCR 1 cut(s) 723
AcsI RAATTY 2 cut(s) 360, 1276
AcuI CTGAAG 3 cut(s) 396, 1061, 1142
AcyI GRCGYC 4 cut(s) 73, 222, 279, 348
AdeI CACNNNGTG 1 cut(s) 595
AfaI GTAC 1 cut(s) 1172
AfiI CCNNNNNNNGG 3 cut(s) 69, 144, 232
AjiI CACGTC 2 cut(s) 522, 652
AjnI CCWGG 5 cut(s) 200, 542, 766, 1243, 1248
AleI CACNNNNGTG 2 cut(s) 611, 779
AluBI AGCT 8 cut(s) 171, 385, 536, 577, 581, 987, 1005, 1129
AluI AGCT 8 cut(s) 171, 385, 536, 577, 581, 987, 1005, 1129
Alw21I GWGCWC 1 cut(s) 387
Alw26I GTCTC 7 cut(s) 58, 202, 278, 326, 365, 814, 836
AlwI GGATC 1 cut(s) 212
Ama87I CYCGRG 1 cut(s) 437
AoxI GGCC 7 cut(s) 3, 393, 441, 539, 622, 723, 1246
ApaI GGGCCC 1 cut(s) 543
ApeKI GCWGC 8 cut(s) 502, 515, 659, 692, 710, 734, 803, 987
ApoI RAATTY 2 cut(s) 360, 1276
AspLEI GCGC 3 cut(s) 75, 350, 502
AspS9I GGNCC 3 cut(s) 539, 540, 623
AsuC2I CCSGG 2 cut(s) 851, 971
AsuHPI GGTGA 5 cut(s) 401, 781, 877, 913, 1264
AsuNHI GCTAGC 1 cut(s) 577
AvaI CYCGRG 1 cut(s) 437
BaeGI GKGCMC 2 cut(s) 543, 620
BanI GGYRCC 5 cut(s) 72, 347, 425, 617, 838
BanII GRGCYC 2 cut(s) 387, 543
BarI GAAGNNNNNNTAC 2 cut(s) 992, 1024
BbsI GAAGAC 1 cut(s) 554
Bbv12I GWGCWC 1 cut(s) 387
BbvCI CCTCAGC 1 cut(s) 167
BbvI GCAGC 8 cut(s) 502, 514, 646, 679, 697, 721, 790, 974
BccI CCATC 4 cut(s) 362, 989, 1046, 1272
BceAI ACGGC 4 cut(s) 313, 434, 680, 1019
BcgI CGANNNNNNTGC 6 cut(s) 407, 428, 441, 462, 1012, 1046
BciT130I CCWGG 5 cut(s) 202, 544, 768, 1245, 1250
BcnI CCSGG 2 cut(s) 851, 971
BcoDI GTCTC 7 cut(s) 58, 202, 278, 326, 365, 814, 836
BfaI CTAG 2 cut(s) 578, 1272
BfmI CTRYAG 1 cut(s) 804
BfoI RGCGCY 2 cut(s) 76, 351
BfuAI ACCTGC 1 cut(s) 499
BglI GCCNNNNNGGC 1 cut(s) 630
BglII AGATCT 1 cut(s) 150
BlpI GCTNAGC 3 cut(s) 432, 582, 963
Bme1390I CCNGG 7 cut(s) 202, 544, 768, 851, 971, 1245, 1250
BmeT110I CYCGRG 1 cut(s) 437
BmgBI CACGTC 2 cut(s) 522, 652
BmgT120I GGNCC 3 cut(s) 539, 540, 623
BmiI GGNNCC 8 cut(s) 74, 349, 427, 541, 619, 720, 772, 840
BmrFI CCNGG 7 cut(s) 202, 544, 768, 851, 971, 1245, 1250
BmsI GCATC 5 cut(s) 309, 865, 874, 1072, 1219
BmtI GCTAGC 1 cut(s) 581
BpiI GAAGAC 1 cut(s) 554
BplI GAGNNNNNCTC 2 cut(s) 1160, 1192
BpmI CTGGAG 2 cut(s) 516, 1227
Bpu10I CCTNAGC 1 cut(s) 167
Bpu1102I GCTNAGC 3 cut(s) 432, 582, 963
BpuMI CCSGG 2 cut(s) 851, 971
BsaHI GRCGYC 4 cut(s) 73, 222, 279, 348
BsaI GGTCTC 1 cut(s) 326
BsaJI CCNNGG 9 cut(s) 68, 183, 213, 231, 396, 438, 542, 687, 939
BsaWI WCCGGW 2 cut(s) 422, 862
BsaXI ACNNNNNCTCC 8 cut(s) 212, 242, 445, 451, 466, 475, 481, 496
Bsc4I CCNNNNNNNGG 3 cut(s) 69, 144, 232
Bse118I RCCGGY 1 cut(s) 620
Bse1I ACTGG 1 cut(s) 444
Bse3DI GCAATG 2 cut(s) 600, 752
BseBI CCWGG 5 cut(s) 202, 544, 768, 1245, 1250
BseDI CCNNGG 9 cut(s) 68, 183, 213, 231, 396, 438, 542, 687, 939
BseGI GGATG 2 cut(s) 300, 1087
BseLI CCNNNNNNNGG 3 cut(s) 69, 144, 232
BseMI GCAATG 2 cut(s) 600, 752
BseMII CTCAG 4 cut(s) 181, 977, 1127, 1191
BseNI ACTGG 1 cut(s) 444
BseRI GAGGAG 6 cut(s) 34, 37, 76, 453, 456, 498
BseSI GKGCMC 2 cut(s) 543, 620
BseXI GCAGC 8 cut(s) 502, 514, 646, 679, 697, 721, 790, 974
BseYI CCCAGC 1 cut(s) 536
Bsh1236I CGCG 2 cut(s) 311, 569
BshFI GGCC 7 cut(s) 5, 395, 443, 541, 624, 725, 1248
BshNI GGYRCC 5 cut(s) 72, 347, 425, 617, 838
BsiHKAI GWGCWC 1 cut(s) 387
BsiHKCI CYCGRG 1 cut(s) 437
BsiSI CCGG 8 cut(s) 423, 621, 666, 707, 722, 850, 863, 971
BslI CCNNNNNNNGG 3 cut(s) 69, 144, 232
BsmAI GTCTC 7 cut(s) 58, 202, 278, 326, 365, 814, 836
BsmBI CGTCTC 2 cut(s) 58, 202
BsmI GAATGC 2 cut(s) 95, 985
BsnI GGCC 7 cut(s) 5, 395, 443, 541, 624, 725, 1248
Bso31I GGTCTC 1 cut(s) 326
BsoBI CYCGRG 1 cut(s) 437
Bsp120I GGGCCC 1 cut(s) 539
Bsp1286I GDGCHC 3 cut(s) 387, 543, 620
Bsp143I GATC 5 cut(s) 141, 150, 192, 204, 822
Bsp1720I GCTNAGC 3 cut(s) 432, 582, 963
Bsp19I CCATGG 1 cut(s) 68
Bsp68I TCGCGA 1 cut(s) 569
BspANI GGCC 7 cut(s) 5, 395, 443, 541, 624, 725, 1248
BspCNI CTCAG 4 cut(s) 180, 976, 1126, 1190
BspFNI CGCG 2 cut(s) 311, 569
BspLI GGNNCC 8 cut(s) 74, 349, 427, 541, 619, 720, 772, 840
BspMAI CTGCAG 1 cut(s) 808
BspMI ACCTGC 1 cut(s) 499
BspOI GCTAGC 1 cut(s) 581
BspPI GGATC 1 cut(s) 212
BspQI GCTCTTC 1 cut(s) 995
BspT107I GGYRCC 5 cut(s) 72, 347, 425, 617, 838
BspTNI GGTCTC 1 cut(s) 326
BsrBI CCGCTC 2 cut(s) 102, 746
BsrDI GCAATG 2 cut(s) 600, 752
BsrFI RCCGGY 1 cut(s) 620
BsrI ACTGG 1 cut(s) 444
BssAI RCCGGY 1 cut(s) 620
BssECI CCNNGG 9 cut(s) 68, 183, 213, 231, 396, 438, 542, 687, 939
BssMI GATC 5 cut(s) 141, 150, 192, 204, 822
BssNI GRCGYC 4 cut(s) 73, 222, 279, 348
BssT1I CCWWGG 4 cut(s) 68, 231, 396, 939
Bst2UI CCWGG 5 cut(s) 202, 544, 768, 1245, 1250
Bst4CI ACNGT 6 cut(s) 130, 553, 610, 688, 778, 1019
Bst6I CTCTTC 1 cut(s) 995
BstACI GRCGYC 4 cut(s) 73, 222, 279, 348
BstC8I GCNNGC 6 cut(s) 162, 579, 801, 936, 985, 1144
BstDEI CTNAG 6 cut(s) 167, 432, 582, 963, 1113, 1177
BstDSI CCRYGG 2 cut(s) 68, 687
BstENI CCTNNNNNAGG 1 cut(s) 230
BstF5I GGATG 2 cut(s) 300, 1087
BstFNI CGCG 2 cut(s) 311, 569
BstH2I RGCGCY 2 cut(s) 76, 351
BstHHI GCGC 3 cut(s) 75, 350, 502
BstKTI GATC 5 cut(s) 144, 153, 195, 207, 825
BstMAI GTCTC 7 cut(s) 58, 202, 278, 326, 365, 814, 836
BstMBI GATC 5 cut(s) 141, 150, 192, 204, 822
BstNI CCWGG 5 cut(s) 202, 544, 768, 1245, 1250
BstSCI CCNGG 7 cut(s) 200, 542, 766, 849, 969, 1243, 1248
BstSFI CTRYAG 1 cut(s) 804
BstSLI GKGCMC 2 cut(s) 543, 620
BstUI CGCG 2 cut(s) 311, 569
BstV1I GCAGC 8 cut(s) 502, 514, 646, 679, 697, 721, 790, 974
BstV2I GAAGAC 1 cut(s) 554
BstX2I RGATCY 1 cut(s) 150
BstXI CCANNNNNNTGG 1 cut(s) 613
BstYI RGATCY 1 cut(s) 150
BsuRI GGCC 7 cut(s) 5, 395, 443, 541, 624, 725, 1248
BtgI CCRYGG 2 cut(s) 68, 687
BtgZI GCGATG 3 cut(s) 888, 902, 1015
BtrI CACGTC 2 cut(s) 522, 652
BtsCI GGATG 2 cut(s) 300, 1087
BtsIMutI CAGTG 2 cut(s) 451, 774
BtuMI TCGCGA 1 cut(s) 569
BveI ACCTGC 1 cut(s) 499
Cac8I GCNNGC 6 cut(s) 162, 579, 801, 936, 985, 1144
CfoI GCGC 3 cut(s) 75, 350, 502
Cfr10I RCCGGY 1 cut(s) 620
Cfr13I GGNCC 3 cut(s) 539, 540, 623
CseI GACGC 1 cut(s) 232
Csp6I GTAC 1 cut(s) 1171
CviAII CATG 5 cut(s) 69, 157, 178, 922, 1166
CviQI GTAC 1 cut(s) 1171
DdeI CTNAG 6 cut(s) 167, 432, 582, 963, 1113, 1177
DinI GGCGCC 2 cut(s) 74, 349
DpnI GATC 5 cut(s) 143, 152, 194, 206, 824
DpnII GATC 5 cut(s) 141, 150, 192, 204, 822
DraIII CACNNNGTG 1 cut(s) 595
EaeI YGGCCR 1 cut(s) 723
Eam1104I CTCTTC 1 cut(s) 995
EarI CTCTTC 1 cut(s) 995
Ecl136II GAGCTC 1 cut(s) 385
Eco130I CCWWGG 4 cut(s) 68, 231, 396, 939
Eco24I GRGCYC 2 cut(s) 387, 543
Eco31I GGTCTC 1 cut(s) 326
Eco53kI GAGCTC 1 cut(s) 385
Eco57I CTGAAG 3 cut(s) 396, 1061, 1142
Eco88I CYCGRG 1 cut(s) 437
EcoICRI GAGCTC 1 cut(s) 385
EcoNI CCTNNNNNAGG 1 cut(s) 230
EcoRI GAATTC 1 cut(s) 360
EcoRII CCWGG 5 cut(s) 200, 542, 766, 1243, 1248
EcoT14I CCWWGG 4 cut(s) 68, 231, 396, 939
EcoT38I GRGCYC 2 cut(s) 387, 543
EgeI GGCGCC 2 cut(s) 74, 349
EheI GGCGCC 2 cut(s) 74, 349
ErhI CCWWGG 4 cut(s) 68, 231, 396, 939
Esp3I CGTCTC 2 cut(s) 58, 202
FaeI CATG 5 cut(s) 72, 160, 181, 925, 1169
FatI CATG 5 cut(s) 68, 156, 177, 921, 1165
FauI CCCGC 3 cut(s) 119, 169, 493
FokI GGATG 2 cut(s) 287, 1094
FriOI GRGCYC 2 cut(s) 387, 543
FspBI CTAG 2 cut(s) 578, 1272
FspI TGCGCA 1 cut(s) 501
GlaI GCGC 3 cut(s) 74, 349, 501
GsaI CCCAGC 1 cut(s) 540
GsuI CTGGAG 2 cut(s) 516, 1227
HaeII RGCGCY 2 cut(s) 76, 351
HaeIII GGCC 7 cut(s) 5, 395, 443, 541, 624, 725, 1248
HapII CCGG 8 cut(s) 423, 621, 666, 707, 722, 850, 863, 971
HgaI GACGC 1 cut(s) 232
HhaI GCGC 3 cut(s) 75, 350, 502
Hin1I GRCGYC 4 cut(s) 73, 222, 279, 348
Hin1II CATG 5 cut(s) 72, 160, 181, 925, 1169
Hin6I GCGC 3 cut(s) 73, 348, 500
HinP1I GCGC 3 cut(s) 73, 348, 500
HinfI GANTC 4 cut(s) 257, 419, 529, 1224
HpaII CCGG 8 cut(s) 423, 621, 666, 707, 722, 850, 863, 971
HphI GGTGA 5 cut(s) 401, 781, 877, 913, 1264
Hpy166II GTNNAC 3 cut(s) 598, 868, 1219
Hpy188I TCNGA 4 cut(s) 214, 262, 359, 1116
Hpy188III TCNNGA 5 cut(s) 283, 568, 811, 1079, 1179
Hpy8I GTNNAC 3 cut(s) 598, 868, 1219
Hpy99I CGWCG 9 cut(s) 224, 248, 251, 284, 299, 323, 347, 614, 847
HpyAV CCTTC 3 cut(s) 574, 903, 1132
HpyCH4III ACNGT 6 cut(s) 130, 553, 610, 688, 778, 1019
HpyCH4IV ACGT 5 cut(s) 222, 279, 521, 651, 845
HpyCH4V TGCA 6 cut(s) 752, 799, 806, 990, 1085, 1282
HpyF3I CTNAG 6 cut(s) 167, 432, 582, 963, 1113, 1177
HpySE526I ACGT 5 cut(s) 222, 279, 521, 651, 845
Hsp92I GRCGYC 4 cut(s) 73, 222, 279, 348
Hsp92II CATG 5 cut(s) 72, 160, 181, 925, 1169
HspAI GCGC 3 cut(s) 73, 348, 500
KasI GGCGCC 2 cut(s) 72, 347
Kzo9I GATC 5 cut(s) 141, 150, 192, 204, 822
LguI GCTCTTC 1 cut(s) 995
LmnI GCTCC 4 cut(s) 107, 176, 724, 751
Lsp1109I GCAGC 8 cut(s) 502, 514, 646, 679, 697, 721, 790, 974
LweI GCATC 5 cut(s) 309, 865, 874, 1072, 1219
MaeI CTAG 2 cut(s) 578, 1272
MaeII ACGT 5 cut(s) 222, 279, 521, 651, 845
MaeIII GTNAC 2 cut(s) 451, 916
MalI GATC 5 cut(s) 143, 152, 194, 206, 824
MbiI CCGCTC 2 cut(s) 102, 746
MboI GATC 5 cut(s) 141, 150, 192, 204, 822
MboII GAAGA 9 cut(s) 145, 559, 583, 691, 732, 826, 1012, 1067, 1229
MflI RGATCY 1 cut(s) 150
MhlI GDGCHC 3 cut(s) 387, 543, 620
MluCI AATT 5 cut(s) 360, 636, 669, 1198, 1276
Mly113I GGCGCC 2 cut(s) 73, 348
MlyI GAGTC 2 cut(s) 266, 523
MmeI TCCRAC 2 cut(s) 129, 285
MseI TTAA 1 cut(s) 1291
MslI CAYNNNNRTG 3 cut(s) 611, 779, 794
MspA1I CMGCKG 2 cut(s) 536, 987
MspI CCGG 8 cut(s) 423, 621, 666, 707, 722, 850, 863, 971
MspR9I CCNGG 7 cut(s) 202, 544, 768, 851, 971, 1245, 1250
Mva1269I GAATGC 2 cut(s) 95, 985
MvaI CCWGG 5 cut(s) 202, 544, 768, 1245, 1250
MvnI CGCG 2 cut(s) 311, 569
NarI GGCGCC 2 cut(s) 73, 348
NciI CCSGG 2 cut(s) 851, 971
NcoI CCATGG 1 cut(s) 68
NdeII GATC 5 cut(s) 141, 150, 192, 204, 822
NheI GCTAGC 1 cut(s) 577
NlaIII CATG 5 cut(s) 72, 160, 181, 925, 1169
NlaIV GGNNCC 8 cut(s) 74, 349, 427, 541, 619, 720, 772, 840
NmeAIII GCCGAG 2 cut(s) 394, 406
NmuCI GTSAC 1 cut(s) 916
NruI TCGCGA 1 cut(s) 569
NsbI TGCGCA 1 cut(s) 501
OliI CACNNNNGTG 2 cut(s) 611, 779
PaqCI CACCTGC 1 cut(s) 499
PciSI GCTCTTC 1 cut(s) 995
PcsI WCGNNNNNNNCGW 2 cut(s) 327, 842
PctI GAATGC 2 cut(s) 95, 985
PfeI GAWTC 2 cut(s) 419, 1224
PfoI TCCNGGA 1 cut(s) 200
PleI GAGTC 2 cut(s) 265, 523
PluTI GGCGCC 2 cut(s) 76, 351
PpsI GAGTC 2 cut(s) 265, 523
Psp124BI GAGCTC 1 cut(s) 387
Psp6I CCWGG 5 cut(s) 200, 542, 766, 1243, 1248
PspFI CCCAGC 1 cut(s) 536
PspGI CCWGG 5 cut(s) 200, 542, 766, 1243, 1248
PspN4I GGNNCC 8 cut(s) 74, 349, 427, 541, 619, 720, 772, 840
PspOMI GGGCCC 1 cut(s) 539
PspPI GGNCC 3 cut(s) 539, 540, 623
PstI CTGCAG 1 cut(s) 808
PsuI RGATCY 1 cut(s) 150
PvuII CAGCTG 2 cut(s) 536, 987
RruI TCGCGA 1 cut(s) 569
RsaI GTAC 1 cut(s) 1172
RsaNI GTAC 1 cut(s) 1171
RseI CAYNNNNRTG 3 cut(s) 611, 779, 794
SacI GAGCTC 1 cut(s) 387
SapI GCTCTTC 1 cut(s) 995
SaqAI TTAA 1 cut(s) 1291
Sau3AI GATC 5 cut(s) 141, 150, 192, 204, 822
Sau96I GGNCC 3 cut(s) 539, 540, 623
SchI GAGTC 2 cut(s) 266, 523
ScrFI CCNGG 7 cut(s) 202, 544, 768, 851, 971, 1245, 1250
SduI GDGCHC 3 cut(s) 387, 543, 620
SfaNI GCATC 5 cut(s) 309, 865, 874, 1072, 1219
SfcI CTRYAG 1 cut(s) 804
SfoI GGCGCC 2 cut(s) 74, 349
SmiMI CAYNNNNRTG 3 cut(s) 611, 779, 794
Sse9I AATT 5 cut(s) 360, 636, 669, 1198, 1276
SspDI GGCGCC 2 cut(s) 72, 347
SspMI CTAG 2 cut(s) 578, 1272
SstI GAGCTC 1 cut(s) 387
StyD4I CCNGG 7 cut(s) 200, 542, 766, 849, 969, 1243, 1248
StyI CCWWGG 4 cut(s) 68, 231, 396, 939
TaaI ACNGT 6 cut(s) 130, 553, 610, 688, 778, 1019
TaiI ACGT 5 cut(s) 225, 282, 524, 654, 848
TaqI TCGA 4 cut(s) 282, 812, 825, 1227
TaqII GACCGA 1 cut(s) 197
TasI AATT 5 cut(s) 360, 636, 669, 1198, 1276
TatI WGTACW 1 cut(s) 1170
TauI GCSGC 8 cut(s) 117, 311, 353, 416, 431, 665, 716, 719
TfiI GAWTC 2 cut(s) 419, 1224
Tru1I TTAA 1 cut(s) 1291
Tru9I TTAA 1 cut(s) 1291
TscAI CASTG 2 cut(s) 451, 781
TseFI GTSAC 1 cut(s) 916
TseI GCWGC 8 cut(s) 502, 515, 659, 692, 710, 734, 803, 987
Tsp45I GTSAC 1 cut(s) 916
TspDTI ATGAA 3 cut(s) 27, 145, 1277
TspGWI ACGGA 1 cut(s) 40
TspRI CASTG 2 cut(s) 451, 781
XagI CCTNNNNNAGG 1 cut(s) 230
XapI RAATTY 2 cut(s) 360, 1276
XcmI CCANNNNNNNNNTGG 1 cut(s) 550
XspI CTAG 2 cut(s) 578, 1272
ZraI GACGTC 2 cut(s) 223, 280
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.