Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0001564

Physical Location & Seq

Genomic Coordinates Reverse (-)

3307955 .. 3309883

Gene Structure 1929 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom13g04940.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1929 bp

ATGTCTCAGAAGCTGGACAGCCCAGTACAGACCCAGATGGCAGTGGCACTATTTAGCAATCCGCTCAGTGGGGAGTACCATGGAAGCAACAGAATGGAAAGGAAGCAGCACACTGGTAGGAGGCGAGTTTTTGTGCAAACTGAAAGTGGATGTGTCTTGGGGATGGATTTGGATCGCAGTGATAATGTCCATACTGTGAAGAGAAGATTGCAGATTGCTCTCAATGTCCCAACTGATGGAAGCTCGTTGACATTTGGGGATGTGGTGTTGAAGAACGATCTGAGTGCAGTTAGGAATGACTCCCCTCTTCTTCTCACAAGGAACCTTATGCATAGAAGTTCGTCAACTCCATGTCTCTCGCCTACTGGAAGGGATCTGCAGCAGAGAGATCGGAGTGGTCCTATAGAGATATTGGGGAACTCAGATCGGTTTACTAGGACAAGCCAAGTGGTCAAGGATATGGTGAAGGCCATCAAGATGGGGGTTGATCGAAGTCCTGTTCATAGTGGGCTTGGAGGTGCATACTATTTCAGGAACAGCAGAGGTGAGTGTGTTTCGATAGTGAAGCCAACTGATGAAGAACCTTTTGCGCCTAATAACCCAAAAGGTTTTGTTGGTAAAGCTCTTGGGCAACCAGGTTTGAAGCGCTCGGTGCGAGTTGGGGAGACTGGATTCCGAGAAGTCGCAGCTTACCTGCTTGACAAAGATCACTTTGCCAATGTGCCTCCCACTGCCTTGGTGAAGATCACTCACTCTATCTTTAACATAAACGATGGGGTGAACGGGAACAAGACTCCCCAGAAGAAGCTGGTTAGCAAGATTGCATCTTGCCAACAATTTATACAACATGATTTTGATGCCAGTGATCATGGGACATCCAGCTTCCCTGTAACTTCTGTGCATCGTATAGGGATATTAGACATTAGGATTCTTAACACTGACAGGCATGCAGGTAACCTTTTAGTTAGGAAACTGGACGGTGTCGGGATGTTTGGTCAAGTGGAGCTCATTCCAATTGACCATGGCCTTTGTTTGCCGGAAACTTTGGAGGACCCCTACTTTGAGTGGATTCATTGGCCTCAGGCTTCTATTCCATTCTCAGATGATGAGCTTGAGTACATAGAAAAGCTTGATCCGCTTGAGGATTGTGAGATGCTGCGAAGGGAGCTTCCCATGATTCGAGAGGCTTGTCTCAGGGTTTTGGTTCTTTGCACCATTTTCCTGAAGGAGTCTGCTGCATATGGTCTGTGTCTTGCTGAAGTAGGTGAGATGATGACTAGGGAATTTCGAAGTGGCGAGGAGGAACCTAGTGAACTTGAGGTAATTTGTATGGAGGCAAGGAGGATGTTAGCAGAGAGGGAGGAGGTGCTGTCCCCCAAGGCTGATTCGGGAGATCAGGAGTTCTTATTTGACATAGACTGTGAGGAAGCAGAGGAAGACTGCACCTTCAAATTTGCAGCAGATGATTATCTGACCAGGGCATCATCTTTTCCATTTGCAAATGGGAGTGGGCATGGCCGCTCGCTTCTCTCTAAACTTGAAGAAAGCATCGAGGAGGAAGAGGACAATGAAGTGGAAGAGCAAGGGGCATTAGCAACTCTGCCAACTCCAGAAAAGGTCCCAAGCGTTTCAAAGCTTTCTATGTCACTGAAGAACACAGTTTTGGTGGGAGAGAAGAGCCACCTGAAGCATATGGGTTCCAAACCAGGAAACGGATACATGGTGAATACATCATCGGGGCACAGGAGTGCAAGCGAGCAGCTTCCTGCAAGCATGAGCTTTGTGAAGCTGGCTGACATGAGCGAGGATGACTGGACCTTGTTTCTGGAGAAGTTTCAAGATATGCTGTACCCGGCATTTGCCAAACGCAAATCTGTTACCCTAGGTCAGAGGCAGAGACAGAGGCTTGGCACGTCGTGCCAGTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004430 GO:0005488 GO:0005515 GO:0006464 GO:0006468 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019637 GO:0019899 GO:0019900 GO:0019901 GO:0030258 GO:0036211 GO:0043170 GO:0043412 GO:0043424 GO:0044237 GO:0044238 GO:0044255 GO:0044260 GO:0044267 GO:0046486 GO:0046488 GO:0046777 GO:0046834 GO:0046854 GO:0052742 GO:0071704 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PI3_PI4_kinase

Protein Analysis

643

Amino Acids

71.57

Weight (kDa)

5.52

Isoelectric Point (pI)

54.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PI3_PI4_kinase	PF00454	172 - 419	2.9e-47	Phosphatidylinositol 3- and 4-kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001564)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G13640 AT1G13640 AT1G26270 AT2G03890 AT2G03890
fragaria_vesca	FvH4_4g29190 FvH4_4g29190 FvH4_6g46200 FvH4_6g46200 FvH4_6g46200 FvH4_6g46200 FvH4_6g46200
malus_domestica	MD13G1055800.v1.1 MD16G1054900.v1.1 MD17G1066800.v1.1
prunus_persica	Prupe.1G295100_v2.0.a1 Prupe.3G247900_v2.0.a1 Prupe.3G247900_v2.0.a1 Prupe.3G247900_v2.0.a1 Prupe.3G247900_v2.0.a1 Prupe.3G247900_v2.0.a1 Prupe.3G247900_v2.0.a1 Prupe.3G247900_v2.0.a1 Prupe.3G247900_v2.0.a1 Prupe.3G247900_v2.0.a1 Prupe.3G247900_v2.0.a1 Prupe.3G247900_v2.0.a1
pyrus_communis	pycom13g04940 pycom16g04780 pycom17g06720
rosa_chinensis	RchiOBHm_Chr2g0164641 RchiOBHm_Chr4g0437261
rosa_laevigata	RLG00000006453 RLG00000021473
rosa_multiflora	Rmu_sc0004339.1_g000020 Rmu_ssc0000076.1_g000009
rosa_roxburghii	Rroxscaffold_2G00086410 Rroxscaffold_5G00378380
rosa_rugosa	Rorug02G0509500 Rorug04G0298800
rosa_samantha	Rh2AG577400 Rh2BG588600 Rh2CG559400 Rh2DG599200 Rh4AG353700 Rh4BG363500 Rh4CG377700 Rh4DG357600
rosa_wichuraiana	Rw2G047950 Rw4G031030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	702, 941
AccB7I	CCANNNNNTGG	1 cut(s)	236
AccBSI	CCGCTC	2 cut(s)	64, 1521
AciI	CCGC	3 cut(s)	62, 1136, 1519
AclWI	GGATC	3 cut(s)	180, 381, 1127
AcoI	YGGCCR	1 cut(s)	1516
AcsI	RAATTY	2 cut(s)	1283, 1451
AcuI	CTGAAG	4 cut(s)	1244, 1278, 1670, 1706
AdeI	CACNNNGTG	1 cut(s)	1917
AfaI	GTAC	4 cut(s)	27, 77, 1118, 1850
AfeI	AGCGCT	1 cut(s)	647
AfiI	CCNNNNNNNGG	3 cut(s)	68, 236, 1712
AgsI	TTSAA	6 cut(s)	271, 643, 1450, 1541, 1632, 1838
AjiI	CACGTC	1 cut(s)	1914
AjnI	CCWGG	3 cut(s)	634, 1475, 1705
AjuI	GAANNNNNNNTTGG	2 cut(s)	1646, 1678
AleI	CACNNNNGTG	1 cut(s)	1746
Alw21I	GWGCWC	1 cut(s)	1008
Alw26I	GTCTC	5 cut(s)	9, 359, 659, 1196, 1891
AlwI	GGATC	3 cut(s)	180, 381, 1127
AlwNI	CAGNNNCTG	1 cut(s)	13
Aor51HI	AGCGCT	1 cut(s)	647
AoxI	GGCC	4 cut(s)	468, 1024, 1076, 1516
ApeKI	GCWGC	7 cut(s)	106, 379, 686, 1156, 1235, 1457, 1759
ApoI	RAATTY	2 cut(s)	1283, 1451
ArsI	GACNNNNNNTTYG	2 cut(s)	1043, 1075
AspA2I	CCTAGG	1 cut(s)	1882
AspLEI	GCGC	2 cut(s)	592, 648
AspS9I	GGNCC	4 cut(s)	398, 1051, 1618, 1815
AsuC2I	CCSGG	1 cut(s)	1853
AsuHPI	GGTGA	6 cut(s)	475, 557, 751, 790, 1277, 1735
AsuII	TTCGAA	1 cut(s)	1288
AvaII	GGWCC	4 cut(s)	398, 1051, 1618, 1815
AvrII	CCTAGG	1 cut(s)	1882
AxyI	CCTNAGG	1 cut(s)	1080
BaeGI	GKGCMC	1 cut(s)	1743
BanII	GRGCYC	1 cut(s)	1008
BbsI	GAAGAC	1 cut(s)	1443
Bbv12I	GWGCWC	1 cut(s)	1008
BbvI	GCAGC	7 cut(s)	118, 391, 698, 1143, 1222, 1469, 1771
BccI	CCATC	6 cut(s)	31, 157, 230, 472, 479, 767
BcgI	CGANNNNNNTGC	4 cut(s)	266, 300, 371, 405
BciT130I	CCWGG	3 cut(s)	636, 1477, 1707
BciVI	GTATCC	1 cut(s)	1709
BclI	TGATCA	1 cut(s)	865
BcnI	CCSGG	1 cut(s)	1853
BcoDI	GTCTC	5 cut(s)	9, 359, 659, 1196, 1891
BfaI	CTAG	4 cut(s)	435, 1278, 1308, 1883
BfmI	CTRYAG	2 cut(s)	377, 402
BfoI	RGCGCY	1 cut(s)	649
BfuAI	ACCTGC	2 cut(s)	702, 941
BfuI	GTATCC	1 cut(s)	1709
BisI	GCNGC	8 cut(s)	107, 380, 687, 1157, 1236, 1458, 1519, 1760
BlnI	CCTAGG	1 cut(s)	1882
BlsI	GCNGC	8 cut(s)	108, 381, 688, 1158, 1237, 1459, 1520, 1761
Bme1390I	CCNGG	4 cut(s)	636, 1477, 1707, 1853
Bme18I	GGWCC	4 cut(s)	398, 1051, 1618, 1815
BmgBI	CACGTC	1 cut(s)	1914
BmgT120I	GGNCC	4 cut(s)	398, 1051, 1618, 1815
BmiI	GGNNCC	5 cut(s)	323, 1053, 1305, 1620, 1699
BmrFI	CCNGG	4 cut(s)	636, 1477, 1707, 1853
BmrI	ACTGGG	1 cut(s)	17
BmsI	GCATC	6 cut(s)	833, 847, 910, 1143, 1490, 1557
BmuI	ACTGGG	1 cut(s)	17
BpiI	GAAGAC	1 cut(s)	1443
BpmI	CTGGAG	2 cut(s)	1593, 1847
Bpu14I	TTCGAA	1 cut(s)	1288
BpuEI	CTTGAG	3 cut(s)	1133, 1160, 1337
BpuMI	CCSGG	1 cut(s)	1853
BsaBI	GATNNNNATC	2 cut(s)	171, 1467
BsaJI	CCNNGG	6 cut(s)	79, 735, 1021, 1377, 1476, 1882
BsaXI	ACNNNNNCTCC	2 cut(s)	1355, 1385
Bsc4I	CCNNNNNNNGG	3 cut(s)	68, 236, 1712
Bse1I	ACTGG	8 cut(s)	23, 118, 370, 673, 861, 978, 1817, 1921
Bse21I	CCTNAGG	1 cut(s)	1080
Bse8I	GATNNNNATC	2 cut(s)	171, 1467
BseBI	CCWGG	3 cut(s)	636, 1477, 1707
BseDI	CCNNGG	6 cut(s)	79, 735, 1021, 1377, 1476, 1882
BseGI	GGATG	7 cut(s)	155, 168, 265, 875, 993, 1350, 1813
BseJI	GATNNNNATC	2 cut(s)	171, 1467
BseLI	CCNNNNNNNGG	3 cut(s)	68, 236, 1712
BseMII	CTCAG	7 cut(s)	20, 79, 272, 435, 1094, 1113, 1207
BseNI	ACTGG	8 cut(s)	23, 118, 370, 673, 861, 978, 1817, 1921
BseRI	GAGGAG	3 cut(s)	1313, 1376, 1568
BseSI	GKGCMC	1 cut(s)	1743
BseXI	GCAGC	7 cut(s)	118, 391, 698, 1143, 1222, 1469, 1771
BsgI	GTGCAG	2 cut(s)	306, 1426
BshFI	GGCC	4 cut(s)	470, 1026, 1078, 1518
BsiHKAI	GWGCWC	1 cut(s)	1008
BsiSI	CCGG	2 cut(s)	1037, 1853
BslFI	GGGAC	4 cut(s)	212, 886, 1357, 1604
BslI	CCNNNNNNNGG	3 cut(s)	68, 236, 1712
BsmAI	GTCTC	5 cut(s)	9, 359, 659, 1196, 1891
BsmFI	GGGAC	4 cut(s)	212, 886, 1357, 1604
BsnI	GGCC	4 cut(s)	470, 1026, 1078, 1518
Bsp119I	TTCGAA	1 cut(s)	1288
Bsp1286I	GDGCHC	2 cut(s)	1008, 1743
Bsp19I	CCATGG	2 cut(s)	79, 1021
BspACI	CCGC	3 cut(s)	62, 1136, 1519
BspANI	GGCC	4 cut(s)	470, 1026, 1078, 1518
BspCNI	CTCAG	7 cut(s)	19, 78, 273, 434, 1093, 1112, 1206
BspLI	GGNNCC	5 cut(s)	323, 1053, 1305, 1620, 1699
BspMAI	CTGCAG	1 cut(s)	381
BspMI	ACCTGC	2 cut(s)	702, 941
BspPI	GGATC	3 cut(s)	180, 381, 1127
BspQI	GCTCTTC	2 cut(s)	1572, 1670
BspT104I	TTCGAA	1 cut(s)	1288
BsrBI	CCGCTC	2 cut(s)	64, 1521
BsrI	ACTGG	8 cut(s)	23, 118, 370, 673, 861, 978, 1817, 1921
BssECI	CCNNGG	6 cut(s)	79, 735, 1021, 1377, 1476, 1882
BssT1I	CCWWGG	5 cut(s)	79, 735, 1021, 1377, 1882
Bst2UI	CCWGG	3 cut(s)	636, 1477, 1707
Bst4CI	ACNGT	4 cut(s)	196, 980, 1421, 1660
Bst6I	CTCTTC	5 cut(s)	194, 312, 1554, 1572, 1670
BstAPI	GCANNNNNTGC	1 cut(s)	1917
BstBI	TTCGAA	1 cut(s)	1288
BstC8I	GCNNGC	6 cut(s)	948, 1523, 1753, 1757, 1771, 1791
BstDEI	CTNAG	7 cut(s)	6, 65, 281, 421, 1080, 1099, 1193
BstDSI	CCRYGG	2 cut(s)	79, 1021
BstEII	GGTNACC	1 cut(s)	953
BstF5I	GGATG	7 cut(s)	155, 168, 265, 875, 993, 1350, 1813
BstH2I	RGCGCY	1 cut(s)	649
BstHHI	GCGC	2 cut(s)	592, 648
BstMAI	GTCTC	5 cut(s)	9, 359, 659, 1196, 1891
BstMWI	GCNNNNNNNGC	4 cut(s)	652, 1135, 1165, 1917
BstNI	CCWGG	3 cut(s)	636, 1477, 1707
BstNSI	RCATGY	1 cut(s)	950
BstPI	GGTNACC	1 cut(s)	953
BstSCI	CCNGG	4 cut(s)	634, 1475, 1705, 1851
BstSFI	CTRYAG	2 cut(s)	377, 402
BstSLI	GKGCMC	1 cut(s)	1743
BstV1I	GCAGC	7 cut(s)	118, 391, 698, 1143, 1222, 1469, 1771
BstV2I	GAAGAC	1 cut(s)	1443
BstX2I	RGATCY	1 cut(s)	373
BstXI	CCANNNNNNTGG	2 cut(s)	478, 736
BstYI	RGATCY	1 cut(s)	373
Bsu36I	CCTNAGG	1 cut(s)	1080
BsuI	GTATCC	1 cut(s)	1709
BsuRI	GGCC	4 cut(s)	470, 1026, 1078, 1518
BtgI	CCRYGG	2 cut(s)	79, 1021
BtrI	CACGTC	1 cut(s)	1914
BtsCI	GGATG	7 cut(s)	155, 168, 265, 875, 993, 1350, 1813
BtsI	GCAGTG	3 cut(s)	48, 184, 729
BtsIMutI	CAGTG	8 cut(s)	48, 73, 111, 184, 729, 868, 936, 1646
BveI	ACCTGC	2 cut(s)	702, 941
Cac8I	GCNNGC	6 cut(s)	948, 1523, 1753, 1757, 1771, 1791
CaiI	CAGNNNCTG	1 cut(s)	13
CfoI	GCGC	2 cut(s)	592, 648
Cfr13I	GGNCC	4 cut(s)	398, 1051, 1618, 1815
CsiI	ACCWGGT	1 cut(s)	634
Csp6I	GTAC	4 cut(s)	26, 76, 1117, 1849
CspCI	CAANNNNNGTGG	2 cut(s)	429, 464
CviQI	GTAC	4 cut(s)	26, 76, 1117, 1849
DdeI	CTNAG	7 cut(s)	6, 65, 281, 421, 1080, 1099, 1193
DraIII	CACNNNGTG	1 cut(s)	1917
EaeI	YGGCCR	1 cut(s)	1516
Eam1104I	CTCTTC	5 cut(s)	194, 312, 1554, 1572, 1670
EarI	CTCTTC	5 cut(s)	194, 312, 1554, 1572, 1670
Ecl136II	GAGCTC	1 cut(s)	1006
Eco130I	CCWWGG	5 cut(s)	79, 735, 1021, 1377, 1882
Eco24I	GRGCYC	1 cut(s)	1008
Eco47I	GGWCC	4 cut(s)	398, 1051, 1618, 1815
Eco47III	AGCGCT	1 cut(s)	647
Eco53kI	GAGCTC	1 cut(s)	1006
Eco57I	CTGAAG	4 cut(s)	1244, 1278, 1670, 1706
Eco81I	CCTNAGG	1 cut(s)	1080
Eco91I	GGTNACC	1 cut(s)	953
EcoICRI	GAGCTC	1 cut(s)	1006
EcoO109I	RGGNCCY	2 cut(s)	1051, 1618
EcoO65I	GGTNACC	1 cut(s)	953
EcoRII	CCWGG	3 cut(s)	634, 1475, 1705
EcoT14I	CCWWGG	5 cut(s)	79, 735, 1021, 1377, 1882
EcoT22I	ATGCAT	1 cut(s)	333
EcoT38I	GRGCYC	1 cut(s)	1008
ErhI	CCWWGG	5 cut(s)	79, 735, 1021, 1377, 1882
FaqI	GGGAC	4 cut(s)	212, 886, 1357, 1604
FauNDI	CATATG	2 cut(s)	1240, 1692
FbaI	TGATCA	1 cut(s)	865
Fnu4HI	GCNGC	8 cut(s)	107, 380, 687, 1157, 1236, 1458, 1519, 1760
FokI	GGATG	7 cut(s)	162, 175, 272, 862, 1000, 1357, 1820
FriOI	GRGCYC	1 cut(s)	1008
Fsp4HI	GCNGC	8 cut(s)	107, 380, 687, 1157, 1236, 1458, 1519, 1760
FspBI	CTAG	4 cut(s)	435, 1278, 1308, 1883
GlaI	GCGC	2 cut(s)	591, 647
GluI	GCNGC	8 cut(s)	107, 380, 687, 1157, 1236, 1458, 1519, 1760
GsuI	CTGGAG	2 cut(s)	1593, 1847
HaeII	RGCGCY	1 cut(s)	649
HaeIII	GGCC	4 cut(s)	470, 1026, 1078, 1518
HapII	CCGG	2 cut(s)	1037, 1853
HhaI	GCGC	2 cut(s)	592, 648
Hin6I	GCGC	2 cut(s)	590, 646
HinP1I	GCGC	2 cut(s)	590, 646
HincII	GTYRAC	2 cut(s)	249, 345
HindII	GTYRAC	2 cut(s)	249, 345
HindIII	AAGCTT	2 cut(s)	1127, 1634
HinfI	GANTC	8 cut(s)	299, 672, 793, 928, 1069, 1177, 1229, 1385
HpaII	CCGG	2 cut(s)	1037, 1853
HphI	GGTGA	6 cut(s)	475, 557, 751, 790, 1277, 1735
Hpy166II	GTNNAC	5 cut(s)	249, 345, 432, 781, 1313
Hpy188I	TCNGA	8 cut(s)	9, 282, 393, 424, 677, 1102, 1473, 1890
Hpy8I	GTNNAC	5 cut(s)	249, 345, 432, 781, 1313
Hpy99I	CGWCG	1 cut(s)	1918
HpyAV	CCTTC	5 cut(s)	363, 460, 1155, 1219, 1456
HpyCH4III	ACNGT	4 cut(s)	196, 980, 1421, 1660
HpyCH4IV	ACGT	1 cut(s)	1913
HpyF10VI	GCNNNNNNNGC	4 cut(s)	652, 1135, 1165, 1917
HpyF3I	CTNAG	7 cut(s)	6, 65, 281, 421, 1080, 1099, 1193
HpySE526I	ACGT	1 cut(s)	1913
HspAI	GCGC	2 cut(s)	590, 646
Ksp22I	TGATCA	1 cut(s)	865
LguI	GCTCTTC	2 cut(s)	1572, 1670
LmnI	GCTCC	2 cut(s)	1003, 1165
Lsp1109I	GCAGC	7 cut(s)	118, 391, 698, 1143, 1222, 1469, 1771
LweI	GCATC	6 cut(s)	833, 847, 910, 1143, 1490, 1557
MabI	ACCWGGT	1 cut(s)	634
MaeI	CTAG	4 cut(s)	435, 1278, 1308, 1883
MaeII	ACGT	1 cut(s)	1913
MaeIII	GTNAC	4 cut(s)	889, 953, 1644, 1876
MbiI	CCGCTC	2 cut(s)	64, 1521
MfeI	CAATTG	1 cut(s)	1014
MflI	RGATCY	1 cut(s)	373
MhlI	GDGCHC	2 cut(s)	1008, 1743
MluCI	AATT	5 cut(s)	836, 1014, 1283, 1323, 1451
MlyI	GAGTC	3 cut(s)	293, 787, 1238
Mph1103I	ATGCAT	1 cut(s)	333
MseI	TTAA	2 cut(s)	762, 933
MslI	CAYNNNNRTG	2 cut(s)	476, 1746
MspI	CCGG	2 cut(s)	1037, 1853
MspR9I	CCNGG	4 cut(s)	636, 1477, 1707, 1853
MunI	CAATTG	1 cut(s)	1014
MvaI	CCWGG	3 cut(s)	636, 1477, 1707
MwoI	GCNNNNNNNGC	4 cut(s)	652, 1135, 1165, 1917
NciI	CCSGG	1 cut(s)	1853
NcoI	CCATGG	2 cut(s)	79, 1021
NdeI	CATATG	2 cut(s)	1240, 1692
NlaIV	GGNNCC	5 cut(s)	323, 1053, 1305, 1620, 1699
NmuCI	GTSAC	1 cut(s)	1644
NsiI	ATGCAT	1 cut(s)	333
NspI	RCATGY	1 cut(s)	950
NspV	TTCGAA	1 cut(s)	1288
OliI	CACNNNNGTG	1 cut(s)	1746
PaeI	GCATGC	1 cut(s)	950
PciSI	GCTCTTC	2 cut(s)	1572, 1670
PfeI	GAWTC	5 cut(s)	672, 928, 1069, 1177, 1385
PflFI	GACNNNGTC	1 cut(s)	980
PflMI	CCANNNNNTGG	1 cut(s)	236
PkrI	GCNGC	8 cut(s)	108, 381, 688, 1158, 1237, 1459, 1520, 1761
PleI	GAGTC	3 cut(s)	293, 787, 1237
PpsI	GAGTC	3 cut(s)	293, 787, 1237
PpuMI	RGGWCCY	2 cut(s)	1051, 1618
Psp124BI	GAGCTC	1 cut(s)	1008
Psp5II	RGGWCCY	2 cut(s)	1051, 1618
Psp6I	CCWGG	3 cut(s)	634, 1475, 1705
PspEI	GGTNACC	1 cut(s)	953
PspGI	CCWGG	3 cut(s)	634, 1475, 1705
PspN4I	GGNNCC	5 cut(s)	323, 1053, 1305, 1620, 1699
PspPI	GGNCC	4 cut(s)	398, 1051, 1618, 1815
PspPPI	RGGWCCY	2 cut(s)	1051, 1618
PstI	CTGCAG	1 cut(s)	381
PstNI	CAGNNNCTG	1 cut(s)	13
PsuI	RGATCY	1 cut(s)	373
PsyI	GACNNNGTC	1 cut(s)	980
RsaI	GTAC	4 cut(s)	27, 77, 1118, 1850
RsaNI	GTAC	4 cut(s)	26, 76, 1117, 1849
RseI	CAYNNNNRTG	2 cut(s)	476, 1746
SacI	GAGCTC	1 cut(s)	1008
SapI	GCTCTTC	2 cut(s)	1572, 1670
SaqAI	TTAA	2 cut(s)	762, 933
SatI	GCNGC	8 cut(s)	107, 380, 687, 1157, 1236, 1458, 1519, 1760
Sau96I	GGNCC	4 cut(s)	398, 1051, 1618, 1815
SchI	GAGTC	3 cut(s)	293, 787, 1238
ScrFI	CCNGG	4 cut(s)	636, 1477, 1707, 1853
SduI	GDGCHC	2 cut(s)	1008, 1743
SexAI	ACCWGGT	1 cut(s)	634
SfaNI	GCATC	6 cut(s)	833, 847, 910, 1143, 1490, 1557
SfcI	CTRYAG	2 cut(s)	377, 402
SfuI	TTCGAA	1 cut(s)	1288
SinI	GGWCC	4 cut(s)	398, 1051, 1618, 1815
SmiMI	CAYNNNNRTG	2 cut(s)	476, 1746
SmlI	CTYRAG	3 cut(s)	1112, 1139, 1316
SmoI	CTYRAG	3 cut(s)	1112, 1139, 1316
SphI	GCATGC	1 cut(s)	950
Sse9I	AATT	5 cut(s)	836, 1014, 1283, 1323, 1451
SsiI	CCGC	3 cut(s)	62, 1136, 1519
SspMI	CTAG	4 cut(s)	435, 1278, 1308, 1883
SstI	GAGCTC	1 cut(s)	1008
StyD4I	CCNGG	4 cut(s)	634, 1475, 1705, 1851
StyI	CCWWGG	5 cut(s)	79, 735, 1021, 1377, 1882
TaaI	ACNGT	4 cut(s)	196, 980, 1421, 1660
TaiI	ACGT	1 cut(s)	1916
TaqI	TCGA	5 cut(s)	490, 557, 1180, 1288, 1551
TasI	AATT	5 cut(s)	836, 1014, 1283, 1323, 1451
TatI	WGTACW	2 cut(s)	25, 1116
TauI	GCSGC	1 cut(s)	1521
TfiI	GAWTC	5 cut(s)	672, 928, 1069, 1177, 1385
Tru1I	TTAA	2 cut(s)	762, 933
Tru9I	TTAA	2 cut(s)	762, 933
TscAI	CASTG	8 cut(s)	48, 73, 118, 184, 736, 868, 943, 1653
TseFI	GTSAC	1 cut(s)	1644
TseI	GCWGC	7 cut(s)	106, 379, 686, 1156, 1235, 1457, 1759
Tsp45I	GTSAC	1 cut(s)	1644
TspDTI	ATGAA	4 cut(s)	491, 591, 1061, 1584
TspGWI	ACGGA	1 cut(s)	1728
TspRI	CASTG	8 cut(s)	48, 73, 118, 184, 736, 868, 943, 1653
Tth111I	GACNNNGTC	1 cut(s)	980
Van91I	CCANNNNNTGG	1 cut(s)	236
VpaK11BI	GGWCC	4 cut(s)	398, 1051, 1618, 1815
XapI	RAATTY	2 cut(s)	1283, 1451
XceI	RCATGY	1 cut(s)	950
XmaJI	CCTAGG	1 cut(s)	1882
XspI	CTAG	4 cut(s)	435, 1278, 1308, 1883
Zsp2I	ATGCAT	1 cut(s)	333

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.