Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0001564

Physical Location & Seq

Genomic Coordinates Forward (+)

7382168 .. 7384042

Gene Structure 1875 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000006453

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1875 bp

ATGGCAGTGGCATTATTTAACAGCGCGCTTACCGGTGAGTATGGGAGCAAGAGGGTGGAAGGGAAGCAGCCTGCTGGTCGGAGAAGAGTTTATGTGCAAACTGAAACTGGATGTGTCCTCGGGATGGAATTAGATCGCGGTGACAATGCCCATACTGTGAAGAGGAGATTGCAGCTTGCTCTCAATGTTCCAACTGAAGAGAGCTCGTTGACATTTGGAGATATGGTGTTGAAGAATGATCTCAGTGCAGTTCGAAATGATTCCCCTCTTCTTCTTACACGTAACCTTATGCACAGAAGCTCATCAACTCCATGTTTATCACCTACTGGGAGGGATATGCAGCAGAGAGATTGGAGTGGTCCTATAGAGATATTAGGGAACTCAGATCAGTTTGCTCGAACAAAGCATGTGGTCAAGGACATTAAGAAGGCCATCAAGATGGGGGTTGATCCAATTCCTGTGCATAGTGGGCTTGGAGGTGCATACTATTTTAGGAATAGTAGAGGCGAAAGTGTTGCAATAGTGAAGCCAACTGATGAAGAACCTTTTGCCCCAAATAACCCAAAAGGTTTTGTTGGTAAAGCTCTGGGCCAACCAGGTTTGAAGCGTTCAGTGCGGGTTGGGGAAACTGGTTTCAGAGAAGTTGCAGCTTATCTGCTCGACAAAGATCACTCTGCAAATGTGCCTCCCACTGCCTTGGTGAAGATCACTCACTCAATCTTCAACATAAATGATGGGGTGAATGGGAACAAGCTGCAAAAGAAGAGGCTGGTTAGCAAGATTGCATCTTGCCAACAATACATACAACATGATTTTGATGCCAGTGATCATGGGACATCCAGCTTTCCAGTAGCAGCTGTGCATCGCATAGGGATTTTAGACATTAGGATTTTAAACACAGACAGGCATGCGGGGAACCTCTTAGTTAGGAAACTTGATGGTGTTGGGAGGTTTGGTCAAGTGGACCTCATTCCGATTGACCATGGCCTTTGCTTGCCAGAATGTTTGGAGGACCCGTACTTTGAGTGGATACATTGGCCTCAGGCTTCTATTCCATTCTCAGATGACGAGCTTGATTACATAGAAAAGCTTGATCCGGTTGAGGAATGTGAGATGCTGCGAAGGGAGCTTCCCATGATACGAGAGGCTTGTCTCAGGGTTTTGGTTCTCTGCACCATTTTTCTGAAGGAGTCTGCTGCTTATGGTCTCTGTCTTGCTGAAATAGGTGAGATGATGACTAGGGAATTTCGTAGTGGCGAGGAGGAGCCTAGTGAACTTGAGGTGATTTGCATGGAAGCAAGGAGGATGCTAGCGGAAAGGGAGGTGCCGTCCCCCAAGGCTGATGTGGGAGTTGAGGAGTTCCTATTTGATATAGATTGTGAGGACGCGGAATCAGACTTCAAATCTGCAGCAGAGGATTATGTGACCAGGACAGCTTTTCCATTTGGAAATGGGAGTGGACATGGTCGCTCTCCTCTCTCTAAACTGGAAGAAAGCATTGAGGAGGAAGAGGAAAGTGAAGGAGAAGAACAAGAGGTGTTAGCAAGTCTGCCACCTTGTGAACATATCCCATCAGTAGCAAAGCTTTCTATGTCGCTGAAGACTACAAGTTTGGGTGAGAAGAACCTCCTGAAATACGTGGGAGCAAAAACAGAAAATGGATACATGGCGAATACATCATCTGGACACAGGAGTGCGAATGAGCAACTTCCTGCAAGCATGAGCTTTGTGAAGCTGGCTGACATGAATGAGGATGATTGGACCTTGTTTCTAGATAAGTTTCAAGATCTGCTTTACCCAGCATTTGGAAAACGAAAGTCTGTTACTCTAGGTCAGAGGCAGAGACAGAGGCTTGGTACCTCTTGCCAGTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004430 GO:0005488 GO:0005515 GO:0006464 GO:0006468 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0019637 GO:0019899 GO:0019900 GO:0019901 GO:0030258 GO:0036211 GO:0043170 GO:0043412 GO:0043424 GO:0044237 GO:0044238 GO:0044255 GO:0044260 GO:0044267 GO:0046486 GO:0046488 GO:0046777 GO:0046834 GO:0046854 GO:0052742 GO:0071704 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PI3_PI4_kinase

Protein Analysis

625

Amino Acids

69.36

Weight (kDa)

5.4

Isoelectric Point (pI)

54.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PI3_PI4_kinase	PF00454	158 - 407	4.5e-44	Phosphatidylinositol 3- and 4-kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001564)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G13640 AT1G13640 AT1G26270 AT2G03890 AT2G03890
fragaria_vesca	FvH4_4g29190 FvH4_4g29190 FvH4_6g46200 FvH4_6g46200 FvH4_6g46200 FvH4_6g46200 FvH4_6g46200
malus_domestica	MD13G1055800.v1.1 MD16G1054900.v1.1 MD17G1066800.v1.1
prunus_persica	Prupe.1G295100_v2.0.a1 Prupe.3G247900_v2.0.a1 Prupe.3G247900_v2.0.a1 Prupe.3G247900_v2.0.a1 Prupe.3G247900_v2.0.a1 Prupe.3G247900_v2.0.a1 Prupe.3G247900_v2.0.a1 Prupe.3G247900_v2.0.a1 Prupe.3G247900_v2.0.a1 Prupe.3G247900_v2.0.a1 Prupe.3G247900_v2.0.a1 Prupe.3G247900_v2.0.a1
pyrus_communis	pycom13g04940 pycom16g04780 pycom17g06720
rosa_chinensis	RchiOBHm_Chr2g0164641 RchiOBHm_Chr4g0437261
rosa_laevigata	RLG00000006453 RLG00000021473
rosa_multiflora	Rmu_sc0004339.1_g000020 Rmu_ssc0000076.1_g000009
rosa_roxburghii	Rroxscaffold_2G00086410 Rroxscaffold_5G00378380
rosa_rugosa	Rorug02G0509500 Rorug04G0298800
rosa_samantha	Rh2AG577400 Rh2BG588600 Rh2CG559400 Rh2DG599200 Rh4AG353700 Rh4BG363500 Rh4CG377700 Rh4DG357600
rosa_wichuraiana	Rw2G047950 Rw4G031030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1856
AccB1I	GGYRCC	2 cut(s)	1324, 1856
AccB7I	CCANNNNNTGG	1 cut(s)	1805
AccII	CGCG	3 cut(s)	26, 138, 1388
AciI	CCGC	5 cut(s)	138, 616, 911, 1313, 1388
AclWI	GGATC	2 cut(s)	443, 1088
AcsI	RAATTY	1 cut(s)	1244
AcuI	CTGAAG	3 cut(s)	216, 1205, 1619
AdeI	CACNNNGTG	1 cut(s)	1559
AfaI	GTAC	2 cut(s)	1019, 1858
AfiI	CCNNNNNNNGG	2 cut(s)	124, 1805
AflIII	ACRYGT	1 cut(s)	278
AgeI	ACCGGT	1 cut(s)	32
AgsI	TTSAA	5 cut(s)	232, 604, 724, 1402, 1784
AjnI	CCWGG	2 cut(s)	595, 1427
AleI	CACNNNNGTG	1 cut(s)	1692
Alw21I	GWGCWC	1 cut(s)	206
Alw26I	GTCTC	3 cut(s)	1157, 1211, 1837
AlwI	GGATC	2 cut(s)	443, 1088
Ama87I	CYCGRG	1 cut(s)	119
AoxI	GGCC	4 cut(s)	429, 589, 985, 1037
ApeKI	GCWGC	9 cut(s)	67, 172, 340, 647, 754, 854, 1117, 1196, 1409
ApoI	RAATTY	1 cut(s)	1244
ArsI	GACNNNNNNTTYG	4 cut(s)	1004, 1036, 1594, 1626
AsiGI	ACCGGT	1 cut(s)	32
Asp700I	GAANNNNTTC	1 cut(s)	259
Asp718I	GGTACC	1 cut(s)	1856
AspLEI	GCGC	2 cut(s)	26, 28
AspS9I	GGNCC	5 cut(s)	359, 589, 964, 1012, 1761
AsuHPI	GGTGA	8 cut(s)	47, 152, 312, 712, 751, 1238, 1294, 1628
AsuII	TTCGAA	1 cut(s)	253
AsuNHI	GCTAGC	1 cut(s)	1309
AvaI	CYCGRG	1 cut(s)	119
AvaII	GGWCC	4 cut(s)	359, 964, 1012, 1761
AxyI	CCTNAGG	1 cut(s)	1041
BanI	GGYRCC	2 cut(s)	1324, 1856
BanII	GRGCYC	1 cut(s)	206
BbsI	GAAGAC	1 cut(s)	1607
Bbv12I	GWGCWC	1 cut(s)	206
BbvI	GCAGC	9 cut(s)	79, 184, 352, 659, 741, 866, 1104, 1183, 1421
BccI	CCATC	6 cut(s)	118, 433, 440, 728, 932, 1579
BceAI	ACGGC	1 cut(s)	1312
BcgI	CGANNNNNNTGC	2 cut(s)	497, 531
BciT130I	CCWGG	2 cut(s)	597, 1429
BciVI	GTATCC	2 cut(s)	1023, 1655
BclI	TGATCA	1 cut(s)	826
BcoDI	GTCTC	3 cut(s)	1157, 1211, 1837
BfaI	CTAG	5 cut(s)	1239, 1269, 1310, 1772, 1829
BfmI	CTRYAG	2 cut(s)	363, 1407
BfuI	GTATCC	2 cut(s)	1023, 1655
BglII	AGATCT	1 cut(s)	1786
BisI	GCNGC	9 cut(s)	68, 173, 341, 648, 755, 855, 1118, 1197, 1410
BlsI	GCNGC	9 cut(s)	69, 174, 342, 649, 756, 856, 1119, 1198, 1411
Bme1390I	CCNGG	2 cut(s)	597, 1429
Bme18I	GGWCC	4 cut(s)	359, 964, 1012, 1761
BmeT110I	CYCGRG	1 cut(s)	119
BmgT120I	GGNCC	5 cut(s)	359, 589, 964, 1012, 1761
BmiI	GGNNCC	5 cut(s)	917, 1014, 1266, 1326, 1858
BmrFI	CCNGG	2 cut(s)	597, 1429
BmrI	ACTGGG	1 cut(s)	336
BmsI	GCATC	5 cut(s)	794, 808, 871, 1104, 1296
BmtI	GCTAGC	1 cut(s)	1313
BmuI	ACTGGG	1 cut(s)	336
BpiI	GAAGAC	1 cut(s)	1607
Bpu14I	TTCGAA	1 cut(s)	253
BpuEI	CTTGAG	1 cut(s)	1298
BsaAI	YACGTR	2 cut(s)	281, 1639
BsaI	GGTCTC	1 cut(s)	1211
BsaJI	CCNNGG	4 cut(s)	118, 696, 982, 1335
BsaWI	WCCGGW	2 cut(s)	32, 1096
BsaXI	ACNNNNNCTCC	8 cut(s)	210, 240, 940, 970, 1001, 1031, 1313, 1343
Bsc4I	CCNNNNNNNGG	2 cut(s)	124, 1805
Bse118I	RCCGGY	1 cut(s)	32
Bse1I	ACTGG	7 cut(s)	112, 331, 634, 822, 848, 1491, 1867
Bse21I	CCTNAGG	1 cut(s)	1041
BseBI	CCWGG	2 cut(s)	597, 1429
BseDI	CCNNGG	4 cut(s)	118, 696, 982, 1335
BseGI	GGATG	5 cut(s)	116, 129, 836, 1311, 1759
BseLI	CCNNNNNNNGG	2 cut(s)	124, 1805
BseMII	CTCAG	5 cut(s)	256, 396, 1055, 1074, 1168
BseNI	ACTGG	7 cut(s)	112, 331, 634, 822, 848, 1491, 1867
BsePI	GCGCGC	1 cut(s)	24
BseRI	GAGGAG	6 cut(s)	178, 1274, 1277, 1370, 1464, 1517
BseXI	GCAGC	9 cut(s)	79, 184, 352, 659, 741, 866, 1104, 1183, 1421
BseYI	CCCAGC	1 cut(s)	1798
BsgI	GTGCAG	2 cut(s)	267, 1156
Bsh1236I	CGCG	3 cut(s)	26, 138, 1388
BshFI	GGCC	4 cut(s)	431, 591, 987, 1039
BshNI	GGYRCC	2 cut(s)	1324, 1856
BshTI	ACCGGT	1 cut(s)	32
BsiHKAI	GWGCWC	1 cut(s)	206
BsiHKCI	CYCGRG	1 cut(s)	119
BsiSI	CCGG	2 cut(s)	33, 1097
BslFI	GGGAC	2 cut(s)	847, 1315
BslI	CCNNNNNNNGG	2 cut(s)	124, 1805
BsmAI	GTCTC	3 cut(s)	1157, 1211, 1837
BsmFI	GGGAC	2 cut(s)	847, 1315
BsnI	GGCC	4 cut(s)	431, 591, 987, 1039
Bso31I	GGTCTC	1 cut(s)	1211
BsoBI	CYCGRG	1 cut(s)	119
Bsp119I	TTCGAA	1 cut(s)	253
Bsp1286I	GDGCHC	1 cut(s)	206
Bsp143I	GATC	9 cut(s)	133, 238, 385, 448, 667, 705, 826, 1093, 1786
Bsp19I	CCATGG	1 cut(s)	982
BspACI	CCGC	5 cut(s)	138, 616, 911, 1313, 1388
BspANI	GGCC	4 cut(s)	431, 591, 987, 1039
BspCNI	CTCAG	5 cut(s)	255, 395, 1054, 1073, 1167
BspFNI	CGCG	3 cut(s)	26, 138, 1388
BspLI	GGNNCC	5 cut(s)	917, 1014, 1266, 1326, 1858
BspMAI	CTGCAG	1 cut(s)	1411
BspOI	GCTAGC	1 cut(s)	1313
BspPI	GGATC	2 cut(s)	443, 1088
BspT104I	TTCGAA	1 cut(s)	253
BspT107I	GGYRCC	2 cut(s)	1324, 1856
BspTNI	GGTCTC	1 cut(s)	1211
BsrFI	RCCGGY	1 cut(s)	32
BsrI	ACTGG	7 cut(s)	112, 331, 634, 822, 848, 1491, 1867
BssAI	RCCGGY	1 cut(s)	32
BssECI	CCNNGG	4 cut(s)	118, 696, 982, 1335
BssHII	GCGCGC	1 cut(s)	24
BssMI	GATC	9 cut(s)	133, 238, 385, 448, 667, 705, 826, 1093, 1786
BssT1I	CCWWGG	3 cut(s)	696, 982, 1335
Bst2UI	CCWGG	2 cut(s)	597, 1429
Bst4CI	ACNGT	1 cut(s)	157
Bst6I	CTCTTC	6 cut(s)	79, 155, 192, 273, 758, 1503
BstBAI	YACGTR	2 cut(s)	281, 1639
BstBI	TTCGAA	1 cut(s)	253
BstC8I	GCNNGC	8 cut(s)	26, 72, 177, 909, 995, 1311, 1717, 1737
BstDEI	CTNAG	6 cut(s)	242, 382, 922, 1041, 1060, 1154
BstDSI	CCRYGG	1 cut(s)	982
BstF5I	GGATG	5 cut(s)	116, 129, 836, 1311, 1759
BstFNI	CGCG	3 cut(s)	26, 138, 1388
BstHHI	GCGC	2 cut(s)	26, 28
BstKTI	GATC	9 cut(s)	136, 241, 388, 451, 670, 708, 829, 1096, 1789
BstMAI	GTCTC	3 cut(s)	1157, 1211, 1837
BstMBI	GATC	9 cut(s)	133, 238, 385, 448, 667, 705, 826, 1093, 1786
BstMWI	GCNNNNNNNGC	3 cut(s)	469, 613, 1126
BstNI	CCWGG	2 cut(s)	597, 1429
BstNSI	RCATGY	2 cut(s)	410, 911
BstSCI	CCNGG	2 cut(s)	595, 1427
BstSFI	CTRYAG	2 cut(s)	363, 1407
BstUI	CGCG	3 cut(s)	26, 138, 1388
BstV1I	GCAGC	9 cut(s)	79, 184, 352, 659, 741, 866, 1104, 1183, 1421
BstV2I	GAAGAC	1 cut(s)	1607
BstX2I	RGATCY	1 cut(s)	1786
BstXI	CCANNNNNNTGG	2 cut(s)	439, 697
BstYI	RGATCY	1 cut(s)	1786
Bsu36I	CCTNAGG	1 cut(s)	1041
BsuI	GTATCC	2 cut(s)	1023, 1655
BsuRI	GGCC	4 cut(s)	431, 591, 987, 1039
BtgI	CCRYGG	1 cut(s)	982
BtgZI	GCGATG	1 cut(s)	848
BtsCI	GGATG	5 cut(s)	116, 129, 836, 1311, 1759
BtsI	GCAGTG	2 cut(s)	12, 690
BtsIMutI	CAGTG	5 cut(s)	12, 250, 618, 690, 829
Cac8I	GCNNGC	8 cut(s)	26, 72, 177, 909, 995, 1311, 1717, 1737
CfoI	GCGC	2 cut(s)	26, 28
Cfr10I	RCCGGY	1 cut(s)	32
Cfr13I	GGNCC	5 cut(s)	359, 589, 964, 1012, 1761
CseI	GACGC	1 cut(s)	1394
CsiI	ACCWGGT	1 cut(s)	595
Csp6I	GTAC	2 cut(s)	1018, 1857
CspAI	ACCGGT	1 cut(s)	32
CspCI	CAANNNNNGTGG	2 cut(s)	390, 425
CviQI	GTAC	2 cut(s)	1018, 1857
DdeI	CTNAG	6 cut(s)	242, 382, 922, 1041, 1060, 1154
DpnI	GATC	9 cut(s)	135, 240, 387, 450, 669, 707, 828, 1095, 1788
DpnII	GATC	9 cut(s)	133, 238, 385, 448, 667, 705, 826, 1093, 1786
DraI	TTTAAA	1 cut(s)	894
DraIII	CACNNNGTG	1 cut(s)	1559
Eam1104I	CTCTTC	6 cut(s)	79, 155, 192, 273, 758, 1503
EarI	CTCTTC	6 cut(s)	79, 155, 192, 273, 758, 1503
Ecl136II	GAGCTC	1 cut(s)	204
Eco130I	CCWWGG	3 cut(s)	696, 982, 1335
Eco24I	GRGCYC	1 cut(s)	206
Eco31I	GGTCTC	1 cut(s)	1211
Eco47I	GGWCC	4 cut(s)	359, 964, 1012, 1761
Eco53kI	GAGCTC	1 cut(s)	204
Eco57I	CTGAAG	3 cut(s)	216, 1205, 1619
Eco81I	CCTNAGG	1 cut(s)	1041
Eco88I	CYCGRG	1 cut(s)	119
EcoICRI	GAGCTC	1 cut(s)	204
EcoO109I	RGGNCCY	1 cut(s)	1012
EcoRII	CCWGG	2 cut(s)	595, 1427
EcoT14I	CCWWGG	3 cut(s)	696, 982, 1335
EcoT38I	GRGCYC	1 cut(s)	206
ErhI	CCWWGG	3 cut(s)	696, 982, 1335
FalI	AAGNNNNNCTT	2 cut(s)	1776, 1808
FaqI	GGGAC	2 cut(s)	847, 1315
FauI	CCCGC	2 cut(s)	609, 904
FbaI	TGATCA	1 cut(s)	826
Fnu4HI	GCNGC	9 cut(s)	68, 173, 341, 648, 755, 855, 1118, 1197, 1410
FokI	GGATG	5 cut(s)	123, 136, 823, 1318, 1766
FriOI	GRGCYC	1 cut(s)	206
Fsp4HI	GCNGC	9 cut(s)	68, 173, 341, 648, 755, 855, 1118, 1197, 1410
FspBI	CTAG	5 cut(s)	1239, 1269, 1310, 1772, 1829
GlaI	GCGC	2 cut(s)	25, 27
GluI	GCNGC	9 cut(s)	68, 173, 341, 648, 755, 855, 1118, 1197, 1410
GsaI	CCCAGC	1 cut(s)	1802
HaeIII	GGCC	4 cut(s)	431, 591, 987, 1039
HapII	CCGG	2 cut(s)	33, 1097
HgaI	GACGC	1 cut(s)	1394
HhaI	GCGC	2 cut(s)	26, 28
Hin6I	GCGC	2 cut(s)	24, 26
HinP1I	GCGC	2 cut(s)	24, 26
HincII	GTYRAC	1 cut(s)	210
HindII	GTYRAC	1 cut(s)	210
HindIII	AAGCTT	2 cut(s)	1088, 1583
HinfI	GANTC	3 cut(s)	260, 1190, 1391
HpaII	CCGG	2 cut(s)	33, 1097
HphI	GGTGA	8 cut(s)	47, 152, 312, 712, 751, 1238, 1294, 1628
Hpy166II	GTNNAC	5 cut(s)	210, 964, 1274, 1460, 1562
Hpy188I	TCNGA	8 cut(s)	81, 385, 638, 975, 1063, 1185, 1396, 1836
Hpy188III	TCNNGA	6 cut(s)	121, 436, 1630, 1683, 1772, 1784
Hpy8I	GTNNAC	5 cut(s)	210, 964, 1274, 1460, 1562
HpyAV	CCTTC	5 cut(s)	53, 421, 1116, 1180, 1514
HpyCH4III	ACNGT	1 cut(s)	157
HpyCH4IV	ACGT	2 cut(s)	280, 1638
HpyF10VI	GCNNNNNNNGC	3 cut(s)	469, 613, 1126
HpyF3I	CTNAG	6 cut(s)	242, 382, 922, 1041, 1060, 1154
HpySE526I	ACGT	2 cut(s)	280, 1638
HspAI	GCGC	2 cut(s)	24, 26
KpnI	GGTACC	1 cut(s)	1860
Ksp22I	TGATCA	1 cut(s)	826
Kzo9I	GATC	9 cut(s)	133, 238, 385, 448, 667, 705, 826, 1093, 1786
LmnI	GCTCC	4 cut(s)	45, 1126, 1264, 1643
Lsp1109I	GCAGC	9 cut(s)	79, 184, 352, 659, 741, 866, 1104, 1183, 1421
LweI	GCATC	5 cut(s)	794, 808, 871, 1104, 1296
MabI	ACCWGGT	1 cut(s)	595
MaeI	CTAG	5 cut(s)	1239, 1269, 1310, 1772, 1829
MaeII	ACGT	2 cut(s)	280, 1638
MaeIII	GTNAC	4 cut(s)	140, 281, 1423, 1822
MalI	GATC	9 cut(s)	135, 240, 387, 450, 669, 707, 828, 1095, 1788
MboI	GATC	9 cut(s)	133, 238, 385, 448, 667, 705, 826, 1093, 1786
MflI	RGATCY	1 cut(s)	1786
MhlI	GDGCHC	1 cut(s)	206
MluCI	AATT	3 cut(s)	128, 453, 1244
MlyI	GAGTC	1 cut(s)	1199
MmeI	TCCRAC	2 cut(s)	59, 215
MroXI	GAANNNNTTC	1 cut(s)	259
MseI	TTAA	3 cut(s)	18, 423, 893
MslI	CAYNNNNRTG	2 cut(s)	437, 1692
MspA1I	CMGCKG	1 cut(s)	857
MspI	CCGG	2 cut(s)	33, 1097
MspR9I	CCNGG	2 cut(s)	597, 1429
MvaI	CCWGG	2 cut(s)	597, 1429
MvnI	CGCG	3 cut(s)	26, 138, 1388
MwoI	GCNNNNNNNGC	3 cut(s)	469, 613, 1126
NcoI	CCATGG	1 cut(s)	982
NdeII	GATC	9 cut(s)	133, 238, 385, 448, 667, 705, 826, 1093, 1786
NheI	GCTAGC	1 cut(s)	1309
NlaIV	GGNNCC	5 cut(s)	917, 1014, 1266, 1326, 1858
NmuCI	GTSAC	2 cut(s)	140, 1423
NspI	RCATGY	2 cut(s)	410, 911
NspV	TTCGAA	1 cut(s)	253
OliI	CACNNNNGTG	1 cut(s)	1692
PaeI	GCATGC	1 cut(s)	911
PauI	GCGCGC	1 cut(s)	24
PdmI	GAANNNNTTC	1 cut(s)	259
PfeI	GAWTC	2 cut(s)	260, 1391
PflFI	GACNNNGTC	1 cut(s)	1464
PflMI	CCANNNNNTGG	1 cut(s)	1805
PinAI	ACCGGT	1 cut(s)	32
PkrI	GCNGC	9 cut(s)	69, 174, 342, 649, 756, 856, 1119, 1198, 1411
PleI	GAGTC	1 cut(s)	1198
PpsI	GAGTC	1 cut(s)	1198
Ppu21I	YACGTR	2 cut(s)	281, 1639
PpuMI	RGGWCCY	1 cut(s)	1012
Psp124BI	GAGCTC	1 cut(s)	206
Psp5II	RGGWCCY	1 cut(s)	1012
Psp6I	CCWGG	2 cut(s)	595, 1427
PspFI	CCCAGC	1 cut(s)	1798
PspGI	CCWGG	2 cut(s)	595, 1427
PspN4I	GGNNCC	5 cut(s)	917, 1014, 1266, 1326, 1858
PspPI	GGNCC	5 cut(s)	359, 589, 964, 1012, 1761
PspPPI	RGGWCCY	1 cut(s)	1012
PstI	CTGCAG	1 cut(s)	1411
PsuI	RGATCY	1 cut(s)	1786
PsyI	GACNNNGTC	1 cut(s)	1464
PteI	GCGCGC	1 cut(s)	24
PvuII	CAGCTG	1 cut(s)	857
RsaI	GTAC	2 cut(s)	1019, 1858
RsaNI	GTAC	2 cut(s)	1018, 1857
RseI	CAYNNNNRTG	2 cut(s)	437, 1692
SacI	GAGCTC	1 cut(s)	206
SaqAI	TTAA	3 cut(s)	18, 423, 893
SatI	GCNGC	9 cut(s)	68, 173, 341, 648, 755, 855, 1118, 1197, 1410
Sau3AI	GATC	9 cut(s)	133, 238, 385, 448, 667, 705, 826, 1093, 1786
Sau96I	GGNCC	5 cut(s)	359, 589, 964, 1012, 1761
SchI	GAGTC	1 cut(s)	1199
ScrFI	CCNGG	2 cut(s)	597, 1429
SduI	GDGCHC	1 cut(s)	206
SexAI	ACCWGGT	1 cut(s)	595
SfaNI	GCATC	5 cut(s)	794, 808, 871, 1104, 1296
SfcI	CTRYAG	2 cut(s)	363, 1407
SfuI	TTCGAA	1 cut(s)	253
SinI	GGWCC	4 cut(s)	359, 964, 1012, 1761
SmiMI	CAYNNNNRTG	2 cut(s)	437, 1692
SmlI	CTYRAG	1 cut(s)	1277
SmoI	CTYRAG	1 cut(s)	1277
SphI	GCATGC	1 cut(s)	911
Sse9I	AATT	3 cut(s)	128, 453, 1244
SsiI	CCGC	5 cut(s)	138, 616, 911, 1313, 1388
SspMI	CTAG	5 cut(s)	1239, 1269, 1310, 1772, 1829
SstI	GAGCTC	1 cut(s)	206
StyD4I	CCNGG	2 cut(s)	595, 1427
StyI	CCWWGG	3 cut(s)	696, 982, 1335
TaaI	ACNGT	1 cut(s)	157
TaiI	ACGT	2 cut(s)	283, 1641
TaqI	TCGA	3 cut(s)	253, 397, 660
TasI	AATT	3 cut(s)	128, 453, 1244
TfiI	GAWTC	2 cut(s)	260, 1391
Tru1I	TTAA	3 cut(s)	18, 423, 893
Tru9I	TTAA	3 cut(s)	18, 423, 893
TscAI	CASTG	5 cut(s)	12, 250, 618, 697, 829
TseFI	GTSAC	2 cut(s)	140, 1423
TseI	GCWGC	9 cut(s)	67, 172, 340, 647, 754, 854, 1117, 1196, 1409
Tsp45I	GTSAC	2 cut(s)	140, 1423
TspDTI	ATGAA	2 cut(s)	552, 1760
TspRI	CASTG	5 cut(s)	12, 250, 618, 697, 829
Tth111I	GACNNNGTC	1 cut(s)	1464
Van91I	CCANNNNNTGG	1 cut(s)	1805
VpaK11BI	GGWCC	4 cut(s)	359, 964, 1012, 1761
XapI	RAATTY	1 cut(s)	1244
XbaI	TCTAGA	1 cut(s)	1771
XceI	RCATGY	2 cut(s)	410, 911
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1342
XmnI	GAANNNNTTC	1 cut(s)	259
XspI	CTAG	5 cut(s)	1239, 1269, 1310, 1772, 1829

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.