pycom17g06720

Phosphatidylinositol 4-kinase gamma 7-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
OG0001564
Physical Location & Seq
Forward (+)
4866778 .. 4867803
1026 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g06720.1

Sequence Viewer

Length: 1026 bp
ATGGCAGTTGCAACCTTCAAAGGACCTCTTAATGGTGAGTACCATGGGGATAAGAGGTTTGAGAGAAAAAATTCTGGCAAGAGACGTGTATTTGTGCAGACTGAAGCCGGTTCTGTTTTGGGTATAGAGCTAGATAGGAGTGACAATGCTCACACGGTGAAGAGGAAATTGCGGCTTGCACTGAACGTCCCAACTGATGAGAGTTCATTGGTATGTGGTGACATGGTGTTGAAGAATGATCTCAGCATTGTTAGAAATGATTCTCCGCTTCTTCTCACCAAGAACCTTATGCACAGAAGCTCGTCTACCCCTTGTCTCTCACCTACTGGGAAGGATCTTCAGCAGAGGGATCAGAGTGGTCCAATTGAGGTACTGGGATACTCAGATCAGTTTGCCAAAACAAAAAAACTGGTTCGTGATATTGTGAAGGCTATACGAAATAACATTGATCCTGTTCCTGTTCATAGCGGTCTTGGAGGTGCATATTACTTTAGAAATTGCGATGGTGAAAATATTGCCATTGTGAAACCGACGGATGAGGAACCGTATGCTCCAAACAACCCAAAAGGTTTTGTTGGGAAAGCTCTTGGACAACCAGGTCTCAAACGTTCTGTGCGGGTTGGGGAGACAGGTTTTAGAGAAGTTGCAGCATTCCTTCTTGATGACAACAATTTTGCTAACGTCCCTGCCACTGCTCTTGTGAAAATTACGCATTCAGTTTTTAATGTTAATGATGGAGTGAAGGGTAATATGCATCAAAATGGAAAGCAAGCAAGTAAGATTGCATCTTTGCAACAATTTGTTCCTCATGATTTTGACGCCAGTGATCACGGGACTTCTAGCTTCCCTGTTGCTGCTGTGCACAGAATAGGTATCCTAGATATCCGGATTCTTAACACGGACAGGCATGCCGGGAACCTTCTTGTTAGGAAGCTTGATGTTCCTGGGAAGTTTGGTCAGGTGGAGCTTGTACCCATTGATCATGGCCTCTGTCTGCCCGAAAGCTTGGAGCGATCCATACTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PI3_PI4_kinase

Protein Analysis

342

Amino Acids

37.27

Weight (kDa)

9.06

Isoelectric Point (pI)

45.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PI3_PI4_kinase PF00454 172 - 338 1.2e-29 Phosphatidylinositol 3- and 4-kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 597
AccI GTMKAC 1 cut(s) 305
AccIII TCCGGA 1 cut(s) 885
AciI CCGC 4 cut(s) 172, 266, 468, 616
AclI AACGTT 1 cut(s) 607
AclWI GGATC 4 cut(s) 342, 357, 443, 1008
AcsI RAATTY 1 cut(s) 70
AcuI CTGAAG 2 cut(s) 123, 323
AcyI GRCGYC 1 cut(s) 819
AdeI CACNNNGTG 1 cut(s) 157
AfaI GTAC 3 cut(s) 41, 372, 972
AfiI CCNNNNNNNGG 1 cut(s) 32
AflIII ACRYGT 1 cut(s) 85
AgsI TTSAA 2 cut(s) 19, 232
AjiI CACGTC 1 cut(s) 86
AjnI CCWGG 2 cut(s) 595, 943
AluBI AGCT 7 cut(s) 130, 300, 584, 843, 934, 967, 1005
AluI AGCT 7 cut(s) 130, 300, 584, 843, 934, 967, 1005
Alw21I GWGCWC 1 cut(s) 864
Alw26I GTCTC 4 cut(s) 76, 320, 605, 620
Alw44I GTGCAC 1 cut(s) 860
AlwI GGATC 4 cut(s) 342, 357, 443, 1008
Aor13HI TCCGGA 1 cut(s) 885
AoxI GGCC 1 cut(s) 985
ApaLI GTGCAC 1 cut(s) 860
ApeKI GCWGC 2 cut(s) 647, 854
ApoI RAATTY 1 cut(s) 70
ArsI GACNNNNNNTTYG 2 cut(s) 656, 688
Asp700I GAANNNNTTC 2 cut(s) 70, 259
AspS9I GGNCC 2 cut(s) 23, 359
AsuC2I CCSGG 1 cut(s) 913
AsuHPI GGTGA 6 cut(s) 47, 169, 230, 268, 312, 518
AvaII GGWCC 2 cut(s) 23, 359
BaeGI GKGCMC 1 cut(s) 864
BarI GAAGNNNNNNTAC 2 cut(s) 289, 321
Bbv12I GWGCWC 1 cut(s) 864
BbvI GCAGC 2 cut(s) 659, 841
BccI CCATC 2 cut(s) 497, 728
BciT130I CCWGG 2 cut(s) 597, 945
BciVI GTATCC 2 cut(s) 371, 884
BclI TGATCA 2 cut(s) 826, 979
BcnI CCSGG 1 cut(s) 913
BcoDI GTCTC 4 cut(s) 76, 320, 605, 620
BfaI CTAG 3 cut(s) 131, 840, 878
BfuI GTATCC 2 cut(s) 371, 884
BisI GCNGC 3 cut(s) 173, 648, 855
BlsI GCNGC 3 cut(s) 174, 649, 856
Bme1390I CCNGG 3 cut(s) 597, 913, 945
Bme18I GGWCC 2 cut(s) 23, 359
BmgBI CACGTC 1 cut(s) 86
BmgT120I GGNCC 2 cut(s) 23, 359
BmiI GGNNCC 2 cut(s) 543, 917
BmrFI CCNGG 3 cut(s) 597, 913, 945
BmrI ACTGGG 2 cut(s) 336, 383
BmsI GCATC 2 cut(s) 763, 794
BmuI ACTGGG 2 cut(s) 336, 383
BpuMI CCSGG 1 cut(s) 913
BsaHI GRCGYC 1 cut(s) 819
BsaI GGTCTC 1 cut(s) 605
BsaJI CCNNGG 2 cut(s) 43, 944
BsaWI WCCGGW 1 cut(s) 885
Bsc4I CCNNNNNNNGG 1 cut(s) 32
Bse118I RCCGGY 1 cut(s) 107
Bse1I ACTGG 4 cut(s) 331, 378, 414, 822
BseAI TCCGGA 1 cut(s) 885
BseBI CCWGG 2 cut(s) 597, 945
BseDI CCNNGG 2 cut(s) 43, 944
BseGI GGATG 1 cut(s) 541
BseLI CCNNNNNNNGG 1 cut(s) 32
BseMII CTCAG 2 cut(s) 256, 396
BseNI ACTGG 4 cut(s) 331, 378, 414, 822
BseSI GKGCMC 1 cut(s) 864
BseXI GCAGC 2 cut(s) 659, 841
BsgI GTGCAG 1 cut(s) 116
BshFI GGCC 1 cut(s) 987
BsiHKAI GWGCWC 1 cut(s) 864
BsiSI CCGG 3 cut(s) 108, 886, 912
BslFI GGGAC 3 cut(s) 173, 668, 847
BslI CCNNNNNNNGG 1 cut(s) 32
BsmAI GTCTC 4 cut(s) 76, 320, 605, 620
BsmBI CGTCTC 1 cut(s) 76
BsmFI GGGAC 3 cut(s) 173, 668, 847
BsmI GAATGC 2 cut(s) 650, 712
BsnI GGCC 1 cut(s) 987
Bso31I GGTCTC 1 cut(s) 605
Bsp1286I GDGCHC 1 cut(s) 864
Bsp13I TCCGGA 1 cut(s) 885
Bsp143I GATC 8 cut(s) 238, 334, 349, 385, 448, 826, 979, 1013
Bsp19I CCATGG 1 cut(s) 43
BspACI CCGC 4 cut(s) 172, 266, 468, 616
BspANI GGCC 1 cut(s) 987
BspCNI CTCAG 2 cut(s) 255, 395
BspEI TCCGGA 1 cut(s) 885
BspHI TCATGA 1 cut(s) 808
BspLI GGNNCC 2 cut(s) 543, 917
BspPI GGATC 4 cut(s) 342, 357, 443, 1008
BspTNI GGTCTC 1 cut(s) 605
BsrFI RCCGGY 1 cut(s) 107
BsrI ACTGG 4 cut(s) 331, 378, 414, 822
BssAI RCCGGY 1 cut(s) 107
BssECI CCNNGG 2 cut(s) 43, 944
BssMI GATC 8 cut(s) 238, 334, 349, 385, 448, 826, 979, 1013
BssNI GRCGYC 1 cut(s) 819
BssT1I CCWWGG 1 cut(s) 43
Bst2UI CCWGG 2 cut(s) 597, 945
Bst4CI ACNGT 2 cut(s) 157, 546
Bst6I CTCTTC 1 cut(s) 155
BstACI GRCGYC 1 cut(s) 819
BstC8I GCNNGC 3 cut(s) 177, 771, 909
BstDEI CTNAG 2 cut(s) 242, 382
BstDSI CCRYGG 1 cut(s) 43
BstF5I GGATG 1 cut(s) 541
BstKTI GATC 8 cut(s) 241, 337, 352, 388, 451, 829, 982, 1016
BstMAI GTCTC 4 cut(s) 76, 320, 605, 620
BstMBI GATC 8 cut(s) 238, 334, 349, 385, 448, 826, 979, 1013
BstNI CCWGG 2 cut(s) 597, 945
BstNSI RCATGY 1 cut(s) 911
BstSCI CCNGG 3 cut(s) 595, 911, 943
BstSLI GKGCMC 1 cut(s) 864
BstV1I GCAGC 2 cut(s) 659, 841
BstX2I RGATCY 1 cut(s) 334
BstYI RGATCY 1 cut(s) 334
BsuI GTATCC 2 cut(s) 371, 884
BsuRI GGCC 1 cut(s) 987
BtgI CCRYGG 1 cut(s) 43
BtgZI GCGATG 1 cut(s) 516
BtrI CACGTC 1 cut(s) 86
BtsCI GGATG 1 cut(s) 541
BtsI GCAGTG 1 cut(s) 690
BtsIMutI CAGTG 3 cut(s) 179, 690, 829
Cac8I GCNNGC 3 cut(s) 177, 771, 909
CciI TCATGA 1 cut(s) 808
Cfr10I RCCGGY 1 cut(s) 107
Cfr13I GGNCC 2 cut(s) 23, 359
CseI GACGC 1 cut(s) 827
CsiI ACCWGGT 1 cut(s) 595
Csp6I GTAC 3 cut(s) 40, 371, 971
CspCI CAANNNNNGTGG 2 cut(s) 679, 714
CviAII CATG 5 cut(s) 44, 223, 809, 908, 983
CviQI GTAC 3 cut(s) 40, 371, 971
DdeI CTNAG 2 cut(s) 242, 382
DpnI GATC 8 cut(s) 240, 336, 351, 387, 450, 828, 981, 1015
DpnII GATC 8 cut(s) 238, 334, 349, 385, 448, 826, 979, 1013
DraIII CACNNNGTG 1 cut(s) 157
DrdI GACNNNNNNGTC 1 cut(s) 597
DseDI GACNNNNNNGTC 1 cut(s) 597
Eam1104I CTCTTC 1 cut(s) 155
EarI CTCTTC 1 cut(s) 155
Eco130I CCWWGG 1 cut(s) 43
Eco31I GGTCTC 1 cut(s) 605
Eco32I GATATC 1 cut(s) 883
Eco47I GGWCC 2 cut(s) 23, 359
Eco57I CTGAAG 2 cut(s) 123, 323
EcoO109I RGGNCCY 1 cut(s) 23
EcoRII CCWGG 2 cut(s) 595, 943
EcoRV GATATC 1 cut(s) 883
EcoT14I CCWWGG 1 cut(s) 43
EcoT22I ATGCAT 1 cut(s) 756
ErhI CCWWGG 1 cut(s) 43
Esp3I CGTCTC 1 cut(s) 76
FaeI CATG 5 cut(s) 47, 226, 812, 911, 986
FalI AAGNNNNNCTT 2 cut(s) 12, 44
FaqI GGGAC 3 cut(s) 173, 668, 847
FatI CATG 5 cut(s) 43, 222, 808, 907, 982
FauI CCCGC 1 cut(s) 609
FbaI TGATCA 2 cut(s) 826, 979
FblI GTMKAC 1 cut(s) 305
Fnu4HI GCNGC 3 cut(s) 173, 648, 855
FokI GGATG 1 cut(s) 548
Fsp4HI GCNGC 3 cut(s) 173, 648, 855
FspBI CTAG 3 cut(s) 131, 840, 878
GluI GCNGC 3 cut(s) 173, 648, 855
HaeIII GGCC 1 cut(s) 987
HapII CCGG 3 cut(s) 108, 886, 912
HgaI GACGC 1 cut(s) 827
Hin1I GRCGYC 1 cut(s) 819
Hin1II CATG 5 cut(s) 47, 226, 812, 911, 986
HindIII AAGCTT 2 cut(s) 932, 1003
HinfI GANTC 2 cut(s) 260, 889
HpaII CCGG 3 cut(s) 108, 886, 912
HphI GGTGA 6 cut(s) 47, 169, 230, 268, 312, 518
Hpy166II GTNNAC 2 cut(s) 306, 862
Hpy188I TCNGA 2 cut(s) 354, 385
Hpy188III TCNNGA 4 cut(s) 416, 659, 809, 886
Hpy8I GTNNAC 2 cut(s) 306, 862
Hpy99I CGWCG 1 cut(s) 535
HpyAV CCTTC 6 cut(s) 25, 325, 421, 665, 736, 929
HpyCH4III ACNGT 2 cut(s) 157, 546
HpyCH4IV ACGT 4 cut(s) 85, 186, 607, 681
HpyF3I CTNAG 2 cut(s) 242, 382
HpySE526I ACGT 4 cut(s) 85, 186, 607, 681
Hsp92I GRCGYC 1 cut(s) 819
Hsp92II CATG 5 cut(s) 47, 226, 812, 911, 986
Kpn2I TCCGGA 1 cut(s) 885
Ksp22I TGATCA 2 cut(s) 826, 979
Kzo9I GATC 8 cut(s) 238, 334, 349, 385, 448, 826, 979, 1013
LmnI GCTCC 3 cut(s) 556, 964, 1009
Lsp1109I GCAGC 2 cut(s) 659, 841
LweI GCATC 2 cut(s) 763, 794
MabI ACCWGGT 1 cut(s) 595
MaeI CTAG 3 cut(s) 131, 840, 878
MaeII ACGT 4 cut(s) 85, 186, 607, 681
MaeIII GTNAC 2 cut(s) 140, 218
MalI GATC 8 cut(s) 240, 336, 351, 387, 450, 828, 981, 1015
MboI GATC 8 cut(s) 238, 334, 349, 385, 448, 826, 979, 1013
MboII GAAGA 4 cut(s) 172, 244, 263, 329
MfeI CAATTG 1 cut(s) 363
MflI RGATCY 1 cut(s) 334
MhlI GDGCHC 1 cut(s) 864
MluCI AATT 7 cut(s) 70, 167, 363, 496, 670, 705, 797
MnlI CCTC 9 cut(s) 36, 48, 156, 339, 361, 470, 532, 816, 998
Mph1103I ATGCAT 1 cut(s) 756
MroI TCCGGA 1 cut(s) 885
MroXI GAANNNNTTC 2 cut(s) 70, 259
MseI TTAA 4 cut(s) 30, 723, 729, 894
MslI CAYNNNNRTG 2 cut(s) 211, 759
MspI CCGG 3 cut(s) 108, 886, 912
MspR9I CCNGG 3 cut(s) 597, 913, 945
MunI CAATTG 1 cut(s) 363
Mva1269I GAATGC 2 cut(s) 650, 712
MvaI CCWGG 2 cut(s) 597, 945
NciI CCSGG 1 cut(s) 913
NcoI CCATGG 1 cut(s) 43
NdeII GATC 8 cut(s) 238, 334, 349, 385, 448, 826, 979, 1013
NlaIII CATG 5 cut(s) 47, 226, 812, 911, 986
NlaIV GGNNCC 2 cut(s) 543, 917
NmuCI GTSAC 2 cut(s) 140, 218
NsiI ATGCAT 1 cut(s) 756
NspI RCATGY 1 cut(s) 911
PaeI GCATGC 1 cut(s) 911
PagI TCATGA 1 cut(s) 808
PctI GAATGC 2 cut(s) 650, 712
PdmI GAANNNNTTC 2 cut(s) 70, 259
PfeI GAWTC 2 cut(s) 260, 889
PkrI GCNGC 3 cut(s) 174, 649, 856
PpuMI RGGWCCY 1 cut(s) 23
Psp1406I AACGTT 1 cut(s) 607
Psp5II RGGWCCY 1 cut(s) 23
Psp6I CCWGG 2 cut(s) 595, 943
PspGI CCWGG 2 cut(s) 595, 943
PspN4I GGNNCC 2 cut(s) 543, 917
PspPI GGNCC 2 cut(s) 23, 359
PspPPI RGGWCCY 1 cut(s) 23
PsuI RGATCY 1 cut(s) 334
RsaI GTAC 3 cut(s) 41, 372, 972
RsaNI GTAC 3 cut(s) 40, 371, 971
RseI CAYNNNNRTG 2 cut(s) 211, 759
SaqAI TTAA 4 cut(s) 30, 723, 729, 894
SatI GCNGC 3 cut(s) 173, 648, 855
Sau3AI GATC 8 cut(s) 238, 334, 349, 385, 448, 826, 979, 1013
Sau96I GGNCC 2 cut(s) 23, 359
ScrFI CCNGG 3 cut(s) 597, 913, 945
SduI GDGCHC 1 cut(s) 864
SexAI ACCWGGT 1 cut(s) 595
SfaNI GCATC 2 cut(s) 763, 794
SinI GGWCC 2 cut(s) 23, 359
SmiMI CAYNNNNRTG 2 cut(s) 211, 759
SphI GCATGC 1 cut(s) 911
Sse9I AATT 7 cut(s) 70, 167, 363, 496, 670, 705, 797
SsiI CCGC 4 cut(s) 172, 266, 468, 616
SspI AATATT 1 cut(s) 514
SspMI CTAG 3 cut(s) 131, 840, 878
StyD4I CCNGG 3 cut(s) 595, 911, 943
StyI CCWWGG 1 cut(s) 43
TaaI ACNGT 2 cut(s) 157, 546
TaiI ACGT 4 cut(s) 88, 189, 610, 684
TasI AATT 7 cut(s) 70, 167, 363, 496, 670, 705, 797
TauI GCSGC 1 cut(s) 175
TfiI GAWTC 2 cut(s) 260, 889
Tru1I TTAA 4 cut(s) 30, 723, 729, 894
Tru9I TTAA 4 cut(s) 30, 723, 729, 894
TscAI CASTG 3 cut(s) 186, 697, 829
TseFI GTSAC 2 cut(s) 140, 218
TseI GCWGC 2 cut(s) 647, 854
Tsp45I GTSAC 2 cut(s) 140, 218
TspDTI ATGAA 2 cut(s) 195, 452
TspGWI ACGGA 2 cut(s) 548, 914
TspRI CASTG 3 cut(s) 186, 697, 829
VneI GTGCAC 1 cut(s) 860
VpaK11BI GGWCC 2 cut(s) 23, 359
XapI RAATTY 1 cut(s) 70
XceI RCATGY 1 cut(s) 911
XmiI GTMKAC 1 cut(s) 305
XmnI GAANNNNTTC 2 cut(s) 70, 259
XspI CTAG 3 cut(s) 131, 840, 878
Zsp2I ATGCAT 1 cut(s) 756
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.