pycom13g05930

Amino acid kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
OG0008655
Physical Location & Seq
Reverse (-)
3891907 .. 3894798
2892 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1017 bp
ATGGAGGAGACCAACACAAAAGATCTCCAAAGCGCTTCTGTCAGTCTCACGAAGCCGATTCGCTGCATCGTCAAACTCGGAGGTGCAGCAATTACTTGCAAGAACGAATTAGAGACAATAAATGAAGCAAATCTCAAGACGGTTTCGTCGCAGCTGAGGCAATCAATGGCTACGGGGTCGCCTTCTGGGGAGGTTCTTGGGATGGATTGGAGCAAGCAACCTGGAGAATCAGAAATTTCATCTGCCATACTTGATTTTGAACATCGGCCAGTTGCGGACCCCAGCCCCTTTATAGTTGTTCATGGAGCAGGTTCTTTTGGGCATTTTCAAGCTAGTAAATCGGGCGTTCATAAAGGTGGGTTGTACCAACCCCTTGTAAAGGCTGGTTTTGTTGCCACACGCATCTCCGTTACAAAGCTCAATCTTGAAATTGTTAGAGCGTTAGCCAGAGAGGGTATCCCTTCCATTGGAATGTCTCCATTTTCATGCGGATGGTCAACCCGTGAAAGAAATATAGCTTCAGCTGATTTGTCTGCAGTGGCCAAGGCTATTGAATCTGGTTTGGTACCTGTTTTGCATGGAGATGCTGTGCTCGATGAGTTACTGGACTGTACCATATTGAGTGGAGATGTCATCATTAGTCACCTTGCAGCGCACTTGAAGCCTGATTTTGTTGTTTTTCTCACTGATGTTTTTGGGGTTTATGACCGTCCACCGTCGGTACCAAATGCAGTACTCTTGAGAGAAATCGCTGTGGCTAAAGATGGGAGCTGGTCGATCGTGAGCCCAACACTTGAGAACATCAATAAGCAAGTTGAGACAAAAGCGGCAGCCCATGATACAACAGGCGGAATGCTGACCAAGATATCGGAAGCTGCGACGATTGCAAAACTCGGAATCGATGTGTACATTGTGAAGGCAGCAACAACCCATGCTTTGAGGGCATTGAGTGGAGAATTGAAAGGCAGCATTCCGGATGACTGGCTTGGAACCGCAATCCGGTTTTCGAATGAATGA

Protein Analysis

339

Amino Acids

35.8

Weight (kDa)

5.88

Isoelectric Point (pI)

38.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AA_kinase PF00696 21 - 305 2.4e-33 Amino acid kinase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 145
Acc36I ACCTGC 1 cut(s) 299
Acc65I GGTACC 2 cut(s) 565, 721
AccB1I GGYRCC 2 cut(s) 565, 721
AccIII TCCGGA 1 cut(s) 973
AciI CCGC 5 cut(s) 275, 489, 827, 849, 993
AcoI YGGCCR 2 cut(s) 266, 540
AcsI RAATTY 1 cut(s) 234
AcuI CTGAAG 1 cut(s) 504
AfaI GTAC 6 cut(s) 365, 567, 613, 723, 735, 908
AfeI AGCGCT 1 cut(s) 34
AfiI CCNNNNNNNGG 3 cut(s) 379, 467, 999
AgsI TTSAA 6 cut(s) 260, 329, 428, 554, 661, 961
AjnI CCWGG 1 cut(s) 220
AluBI AGCT 7 cut(s) 154, 332, 418, 518, 524, 771, 875
AluI AGCT 7 cut(s) 154, 332, 418, 518, 524, 771, 875
Alw21I GWGCWC 1 cut(s) 594
Alw26I GTCTC 5 cut(s) 2, 50, 107, 480, 812
Aor13HI TCCGGA 1 cut(s) 973
Aor51HI AGCGCT 1 cut(s) 34
AoxI GGCC 2 cut(s) 266, 540
ApeKI GCWGC 8 cut(s) 63, 86, 151, 650, 830, 875, 920, 966
ApoI RAATTY 1 cut(s) 234
Asp718I GGTACC 2 cut(s) 565, 721
AspLEI GCGC 2 cut(s) 35, 655
AspS9I GGNCC 1 cut(s) 277
AsuHPI GGTGA 1 cut(s) 635
AsuII TTCGAA 1 cut(s) 1007
AvaII GGWCC 1 cut(s) 277
BalI TGGCCA 1 cut(s) 542
BanI GGYRCC 2 cut(s) 565, 721
BanII GRGCYC 1 cut(s) 788
Bbv12I GWGCWC 1 cut(s) 594
BbvCI CCTCAGC 1 cut(s) 155
BbvI GCAGC 8 cut(s) 50, 98, 163, 662, 842, 862, 932, 978
BccI CCATC 3 cut(s) 196, 486, 758
BciT130I CCWGG 1 cut(s) 222
BciVI GTATCC 1 cut(s) 467
BcoDI GTCTC 5 cut(s) 2, 50, 107, 480, 812
BfaI CTAG 1 cut(s) 333
BfmI CTRYAG 1 cut(s) 534
BfoI RGCGCY 1 cut(s) 36
BfuAI ACCTGC 1 cut(s) 299
BfuI GTATCC 1 cut(s) 467
BglII AGATCT 1 cut(s) 22
BisI GCNGC 9 cut(s) 64, 87, 152, 651, 828, 831, 876, 921, 967
BlsI GCNGC 9 cut(s) 65, 88, 153, 652, 829, 832, 877, 922, 968
BmcAI AGTACT 1 cut(s) 735
Bme1390I CCNGG 1 cut(s) 222
Bme18I GGWCC 1 cut(s) 277
BmgT120I GGNCC 1 cut(s) 277
BmiI GGNNCC 4 cut(s) 279, 567, 723, 991
BmrFI CCNGG 1 cut(s) 222
BmsI GCATC 3 cut(s) 75, 411, 574
BpmI CTGGAG 1 cut(s) 243
Bpu10I CCTNAGC 1 cut(s) 155
Bpu14I TTCGAA 1 cut(s) 1007
BpuEI CTTGAG 3 cut(s) 119, 760, 815
Bsa29I ATCGAT 1 cut(s) 900
BsaI GGTCTC 1 cut(s) 2
BsaJI CCNNGG 1 cut(s) 543
BsaWI WCCGGW 2 cut(s) 973, 999
BsaXI ACNNNNNCTCC 2 cut(s) 573, 603
Bsc4I CCNNNNNNNGG 3 cut(s) 379, 467, 999
Bse1I ACTGG 3 cut(s) 269, 609, 986
BseAI TCCGGA 1 cut(s) 973
BseBI CCWGG 1 cut(s) 222
BseCI ATCGAT 1 cut(s) 900
BseDI CCNNGG 1 cut(s) 543
BseGI GGATG 3 cut(s) 207, 497, 982
BseLI CCNNNNNNNGG 3 cut(s) 379, 467, 999
BseMII CTCAG 1 cut(s) 146
BseNI ACTGG 3 cut(s) 269, 609, 986
BseRI GAGGAG 1 cut(s) 20
BseXI GCAGC 8 cut(s) 50, 98, 163, 662, 842, 862, 932, 978
BseYI CCCAGC 1 cut(s) 281
BsgI GTGCAG 1 cut(s) 105
Bsh1285I CGRYCG 1 cut(s) 780
BshFI GGCC 2 cut(s) 268, 542
BshNI GGYRCC 2 cut(s) 565, 721
BshVI ATCGAT 1 cut(s) 900
BsiEI CGRYCG 1 cut(s) 780
BsiHKAI GWGCWC 1 cut(s) 594
BsiSI CCGG 2 cut(s) 974, 1000
BslI CCNNNNNNNGG 3 cut(s) 379, 467, 999
BsmAI GTCTC 5 cut(s) 2, 50, 107, 480, 812
BsmI GAATGC 2 cut(s) 858, 969
BsnI GGCC 2 cut(s) 268, 542
Bso31I GGTCTC 1 cut(s) 2
Bsp119I TTCGAA 1 cut(s) 1007
Bsp1286I GDGCHC 2 cut(s) 594, 788
Bsp13I TCCGGA 1 cut(s) 973
Bsp1407I TGTACA 1 cut(s) 906
Bsp143I GATC 2 cut(s) 22, 777
BspACI CCGC 5 cut(s) 275, 489, 827, 849, 993
BspANI GGCC 2 cut(s) 268, 542
BspCNI CTCAG 1 cut(s) 147
BspDI ATCGAT 1 cut(s) 900
BspEI TCCGGA 1 cut(s) 973
BspLI GGNNCC 4 cut(s) 279, 567, 723, 991
BspMAI CTGCAG 1 cut(s) 538
BspMI ACCTGC 1 cut(s) 299
BspT104I TTCGAA 1 cut(s) 1007
BspT107I GGYRCC 2 cut(s) 565, 721
BspTNI GGTCTC 1 cut(s) 2
BsrGI TGTACA 1 cut(s) 906
BsrI ACTGG 3 cut(s) 269, 609, 986
BssECI CCNNGG 1 cut(s) 543
BssMI GATC 2 cut(s) 22, 777
BssT1I CCWWGG 1 cut(s) 543
Bst2UI CCWGG 1 cut(s) 222
Bst4CI ACNGT 4 cut(s) 142, 611, 710, 717
BstAUI TGTACA 1 cut(s) 906
BstBI TTCGAA 1 cut(s) 1007
BstC8I GCNNGC 1 cut(s) 215
BstDEI CTNAG 1 cut(s) 155
BstENI CCTNNNNNAGG 1 cut(s) 377
BstF5I GGATG 3 cut(s) 207, 497, 982
BstH2I RGCGCY 1 cut(s) 36
BstHHI GCGC 2 cut(s) 35, 655
BstKTI GATC 2 cut(s) 25, 780
BstMAI GTCTC 5 cut(s) 2, 50, 107, 480, 812
BstMBI GATC 2 cut(s) 22, 777
BstMCI CGRYCG 1 cut(s) 780
BstMWI GCNNNNNNNGC 4 cut(s) 157, 661, 884, 941
BstNI CCWGG 1 cut(s) 222
BstSCI CCNGG 1 cut(s) 220
BstSFI CTRYAG 1 cut(s) 534
BstV1I GCAGC 8 cut(s) 50, 98, 163, 662, 842, 862, 932, 978
BstX2I RGATCY 1 cut(s) 22
BstYI RGATCY 1 cut(s) 22
Bsu15I ATCGAT 1 cut(s) 900
BsuI GTATCC 1 cut(s) 467
BsuRI GGCC 2 cut(s) 268, 542
BsuTUI ATCGAT 1 cut(s) 900
BtsCI GGATG 3 cut(s) 207, 497, 982
BtsI GCAGTG 1 cut(s) 543
BtsIMutI CAGTG 2 cut(s) 543, 684
BveI ACCTGC 1 cut(s) 299
Cac8I GCNNGC 1 cut(s) 215
CfoI GCGC 2 cut(s) 35, 655
Cfr13I GGNCC 1 cut(s) 277
ClaI ATCGAT 1 cut(s) 900
Csp6I GTAC 6 cut(s) 364, 566, 612, 722, 734, 907
CviAII CATG 5 cut(s) 302, 486, 578, 836, 932
CviQI GTAC 6 cut(s) 364, 566, 612, 722, 734, 907
DdeI CTNAG 1 cut(s) 155
DpnI GATC 2 cut(s) 24, 779
DpnII GATC 2 cut(s) 22, 777
DrdI GACNNNNNNGTC 1 cut(s) 145
DseDI GACNNNNNNGTC 1 cut(s) 145
EaeI YGGCCR 2 cut(s) 266, 540
EciI GGCGGA 1 cut(s) 864
Eco130I CCWWGG 1 cut(s) 543
Eco24I GRGCYC 1 cut(s) 788
Eco31I GGTCTC 1 cut(s) 2
Eco32I GATATC 1 cut(s) 867
Eco47I GGWCC 1 cut(s) 277
Eco47III AGCGCT 1 cut(s) 34
Eco57I CTGAAG 1 cut(s) 504
EcoNI CCTNNNNNAGG 1 cut(s) 377
EcoRII CCWGG 1 cut(s) 220
EcoRV GATATC 1 cut(s) 867
EcoT14I CCWWGG 1 cut(s) 543
EcoT38I GRGCYC 1 cut(s) 788
ErhI CCWWGG 1 cut(s) 543
FaeI CATG 5 cut(s) 305, 489, 581, 839, 935
FatI CATG 5 cut(s) 301, 485, 577, 835, 931
Fnu4HI GCNGC 9 cut(s) 64, 87, 152, 651, 828, 831, 876, 921, 967
FokI GGATG 3 cut(s) 214, 504, 989
FriOI GRGCYC 1 cut(s) 788
Fsp4HI GCNGC 9 cut(s) 64, 87, 152, 651, 828, 831, 876, 921, 967
FspBI CTAG 1 cut(s) 333
GlaI GCGC 2 cut(s) 34, 654
GluI GCNGC 9 cut(s) 64, 87, 152, 651, 828, 831, 876, 921, 967
GsaI CCCAGC 1 cut(s) 285
GsuI CTGGAG 1 cut(s) 243
HaeII RGCGCY 1 cut(s) 36
HaeIII GGCC 2 cut(s) 268, 542
HapII CCGG 2 cut(s) 974, 1000
HhaI GCGC 2 cut(s) 35, 655
Hin1II CATG 5 cut(s) 305, 489, 581, 839, 935
Hin6I GCGC 2 cut(s) 33, 653
HinP1I GCGC 2 cut(s) 33, 653
HincII GTYRAC 1 cut(s) 498
HindII GTYRAC 1 cut(s) 498
HinfI GANTC 4 cut(s) 58, 227, 554, 897
HpaII CCGG 2 cut(s) 974, 1000
HphI GGTGA 1 cut(s) 635
Hpy166II GTNNAC 3 cut(s) 498, 713, 907
Hpy188I TCNGA 4 cut(s) 80, 232, 871, 896
Hpy188III TCNNGA 6 cut(s) 49, 136, 425, 739, 781, 974
Hpy8I GTNNAC 3 cut(s) 498, 713, 907
Hpy99I CGWCG 3 cut(s) 151, 721, 883
HpyAV CCTTC 3 cut(s) 192, 471, 910
HpyCH4III ACNGT 4 cut(s) 142, 611, 710, 717
HpyCH4V TGCA 8 cut(s) 66, 86, 99, 536, 577, 650, 731, 887
HpyF10VI GCNNNNNNNGC 4 cut(s) 157, 661, 884, 941
HpyF3I CTNAG 1 cut(s) 155
Hsp92II CATG 5 cut(s) 305, 489, 581, 839, 935
HspAI GCGC 2 cut(s) 33, 653
Kpn2I TCCGGA 1 cut(s) 973
KpnI GGTACC 2 cut(s) 569, 725
Kzo9I GATC 2 cut(s) 22, 777
LmnI GCTCC 3 cut(s) 210, 305, 768
Lsp1109I GCAGC 8 cut(s) 50, 98, 163, 662, 842, 862, 932, 978
LweI GCATC 3 cut(s) 75, 411, 574
MaeI CTAG 1 cut(s) 333
MaeIII GTNAC 3 cut(s) 409, 600, 641
MalI GATC 2 cut(s) 24, 779
MboI GATC 2 cut(s) 22, 777
MflI RGATCY 1 cut(s) 22
MhlI GDGCHC 2 cut(s) 594, 788
MlsI TGGCCA 1 cut(s) 542
MluCI AATT 5 cut(s) 90, 107, 234, 429, 956
MluNI TGGCCA 1 cut(s) 542
MnlI CCTC 5 cut(s) 74, 150, 184, 445, 933
Mox20I TGGCCA 1 cut(s) 542
MroI TCCGGA 1 cut(s) 973
MscI TGGCCA 1 cut(s) 542
MslI CAYNNNNRTG 5 cut(s) 354, 470, 484, 490, 582
Msp20I TGGCCA 1 cut(s) 542
MspA1I CMGCKG 2 cut(s) 154, 524
MspI CCGG 2 cut(s) 974, 1000
MspR9I CCNGG 1 cut(s) 222
Mva1269I GAATGC 2 cut(s) 858, 969
MvaI CCWGG 1 cut(s) 222
MwoI GCNNNNNNNGC 4 cut(s) 157, 661, 884, 941
NdeII GATC 2 cut(s) 22, 777
NlaIII CATG 5 cut(s) 305, 489, 581, 839, 935
NlaIV GGNNCC 4 cut(s) 279, 567, 723, 991
NmuCI GTSAC 1 cut(s) 641
NspV TTCGAA 1 cut(s) 1007
PcsI WCGNNNNNNNCGW 1 cut(s) 875
PctI GAATGC 2 cut(s) 858, 969
PfeI GAWTC 4 cut(s) 58, 227, 554, 897
PkrI GCNGC 9 cut(s) 65, 88, 153, 652, 829, 832, 877, 922, 968
Ple19I CGATCG 1 cut(s) 780
Psp6I CCWGG 1 cut(s) 220
PspFI CCCAGC 1 cut(s) 281
PspGI CCWGG 1 cut(s) 220
PspN4I GGNNCC 4 cut(s) 279, 567, 723, 991
PspPI GGNCC 1 cut(s) 277
PstI CTGCAG 1 cut(s) 538
PsuI RGATCY 1 cut(s) 22
PvuI CGATCG 1 cut(s) 780
PvuII CAGCTG 2 cut(s) 154, 524
RsaI GTAC 6 cut(s) 365, 567, 613, 723, 735, 908
RsaNI GTAC 6 cut(s) 364, 566, 612, 722, 734, 907
RseI CAYNNNNRTG 5 cut(s) 354, 470, 484, 490, 582
SatI GCNGC 9 cut(s) 64, 87, 152, 651, 828, 831, 876, 921, 967
Sau3AI GATC 2 cut(s) 22, 777
Sau96I GGNCC 1 cut(s) 277
ScaI AGTACT 1 cut(s) 735
ScrFI CCNGG 1 cut(s) 222
SduI GDGCHC 2 cut(s) 594, 788
SfaNI GCATC 3 cut(s) 75, 411, 574
SfcI CTRYAG 1 cut(s) 534
SfuI TTCGAA 1 cut(s) 1007
SinI GGWCC 1 cut(s) 277
SmiMI CAYNNNNRTG 5 cut(s) 354, 470, 484, 490, 582
SmlI CTYRAG 3 cut(s) 134, 739, 794
SmoI CTYRAG 3 cut(s) 134, 739, 794
Sse9I AATT 5 cut(s) 90, 107, 234, 429, 956
SsiI CCGC 5 cut(s) 275, 489, 827, 849, 993
SspMI CTAG 1 cut(s) 333
StyD4I CCNGG 1 cut(s) 220
StyI CCWWGG 1 cut(s) 543
TaaI ACNGT 4 cut(s) 142, 611, 710, 717
TaqI TCGA 4 cut(s) 594, 776, 900, 1007
TasI AATT 5 cut(s) 90, 107, 234, 429, 956
TatI WGTACW 2 cut(s) 733, 906
TauI GCSGC 1 cut(s) 830
TfiI GAWTC 4 cut(s) 58, 227, 554, 897
TscAI CASTG 2 cut(s) 543, 691
TseFI GTSAC 1 cut(s) 641
TseI GCWGC 8 cut(s) 63, 86, 151, 650, 830, 875, 920, 966
Tsp45I GTSAC 1 cut(s) 641
TspDTI ATGAA 5 cut(s) 138, 228, 290, 338, 474
TspGWI ACGGA 1 cut(s) 397
TspRI CASTG 2 cut(s) 543, 691
VpaK11BI GGWCC 1 cut(s) 277
XagI CCTNNNNNAGG 1 cut(s) 377
XapI RAATTY 1 cut(s) 234
XspI CTAG 1 cut(s) 333
ZrmI AGTACT 1 cut(s) 735
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.