pycom13g13810

positive regulation of rRNA processing

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
OG0008733
Physical Location & Seq
Reverse (-)
9810474 .. 9812795
2322 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1437 bp
ATGAAGATGCTATTGTATTTTGTTCTGAAGTGTTCTGAGAACCAGTGGCTTTTTCTAAATTTCCACCGTTTTCAGGTGGTGCTTCTCCTGCTGCTGGCCGTGAGTAATGCCGTCAAAGTTGACGGAGAAGACGATGAGAAACCGTGTGATAATAAACTGACATTAGAGCCAAGGCCGCACAGTGTGTCCATCTTAGAATTTGGCGCTGTCGGAGATGGCAAGACATTGAACACTCTTGCCTTTCAGAATGCCATCTTCTATCTCAAGTCTTTCGCCGATAAGGGCGGTGCTCAGCTCTATGTGCCGCCGGGGAGGTGGCTTACCGGAAGCTTCAACCTCACCAGCCACCTCACACTGTTTTTGGAAAAGGATGCTGTCATTCTTGGATCTCAGGATCCGTCCCATTGGGAAATTGTTGAGCCTTTACCCTCGTACGGTCGAGGGATTGAACTCCCCGGGAGGAGATATCGTAGCTTGATAAATGGATATATGTTACATGATGTGGTCATAACAGGTGATAATGGAACCATCAATGGCCAGGGATCGATCTCTTGGTGGGATTGGTTTAGCTCCCAATCTCTGAACTACAGCCGCCCGCATCTTGTGGAATTCGTTATGTCTAAATACGTGGTGGTTTCGAACCTCACATTTATAAATGCTCCCGCTTACAACATCCATCCAGTTTATTGCAGTAATGTACATGTTCTCAACATATCTGTATCTGCTCCTCCGGACTCCCCTCATACTGTCGGAATAGTCCCAGATTCTTCTGATACTGTGTGCATAGAAGATTGCATCATTGGCATGGGGTATGATGCCATTGCCCTCAAGAGTGGTTGGGATGAGTACGGTATTGCCTATGGAAGACCGACCACAAATGTACACATCCGGCATGTCACCTTACAATCAGCTGCTGGTTCTTCTCTTGCCTTTGGTAGTGAGATGTCCGGTGGCATTTCTAACGTACTTGTTGAGCAGGTCCGCCTCCACAACTCCTTTAGCGGCATTCAGTTCCGAACAACAAAGGGTAGAGGCGGTTACATCACAGACATCATCATATCAGATGTAGAAGTAGAAAACATCTACATGGCATTTGGTGCCTCTGGCCAGTTTGGTTCTCATCCTGATGACAGATATGATCCTAACGCTCTCCCTGTTTTGGATCACATCACATTGCAAGACGTTGTTGGCACAAACATCACCATTGCCGGACGCTTCACTGGCATCGAAGAATCACCATTCACTTCTTTCTTTCTATCCAACATCTCCTTATCATTAAATTCTGCTTCTCCCACTACTTGGGATTGTTCGTATGTTTCCGGCTCTTCTGAGTCTGTCTTTCCAGAACCATGTTCCGACCTCAATACCTCGTATTCAAATCCTTCCTCCGCCCACATTTCGCTGCTCACCGTGAATGGAAAAGCCGCGGTCTTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000462 GO:0000785 GO:0000792 GO:0001650 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005694 GO:0005730 GO:0006139 GO:0006355 GO:0006356 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0006950 GO:0007154 GO:0008150 GO:0008152 GO:0009267 GO:0009605 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0009991 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016070 GO:0016072 GO:0019219 GO:0019222 GO:0022613 GO:0030490 GO:0030515 GO:0030684 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031667 GO:0031668 GO:0031669 GO:0031974 GO:0031981 GO:0032040 GO:0032991 GO:0033553 GO:0033554 GO:0034455 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042274 GO:0042594 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044087 GO:0044089 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0045893 GO:0045935 GO:0045943 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0071496 GO:0071704 GO:0071840 GO:0080090 GO:0090069 GO:0090070 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1902680 GO:1903506 GO:1903508 GO:1990904 GO:2000112 GO:2000232 GO:2000234 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko00280 ko00630 ko00640 ko01100 ko01120 ko01130 ko01200 ko03008 map00280 map00630 map00640 map01100 map01120 map01130 map01200 map03008
Pfam Domains
Protein Families
Utp12 WD40

Protein Analysis

479

Amino Acids

52.27

Weight (kDa)

5.17

Isoelectric Point (pI)

45.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_28 PF00295 160 - 440 8.9e-27 Glycosyl hydrolases family 28
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 653
Acc36I ACCTGC 1 cut(s) 967
AccB1I GGYRCC 1 cut(s) 1097
AccB7I CCANNNNNTGG 1 cut(s) 1299
AccII CGCG 1 cut(s) 1427
AccIII TCCGGA 1 cut(s) 730
AclWI GGATC 6 cut(s) 389, 394, 402, 550, 1133, 1170
AcoI YGGCCR 3 cut(s) 96, 535, 1105
AcsI RAATTY 4 cut(s) 58, 197, 608, 1279
AcuI CTGAAG 1 cut(s) 47
AdeI CACNNNGTG 1 cut(s) 184
AfaI GTAC 5 cut(s) 434, 699, 848, 882, 966
AfiI CCNNNNNNNGG 5 cut(s) 73, 94, 434, 1159, 1299
AflIII ACRYGT 1 cut(s) 700
AgsI TTSAA 4 cut(s) 229, 334, 449, 1377
AjnI CCWGG 1 cut(s) 537
AluBI AGCT 5 cut(s) 295, 330, 474, 570, 911
AluI AGCT 5 cut(s) 295, 330, 474, 570, 911
Alw21I GWGCWC 1 cut(s) 292
AlwI GGATC 6 cut(s) 389, 394, 402, 550, 1133, 1170
AlwNI CAGNNNCTG 1 cut(s) 914
Ama87I CYCGRG 1 cut(s) 455
Aor13HI TCCGGA 1 cut(s) 730
AoxI GGCC 4 cut(s) 96, 173, 535, 1105
ApeKI GCWGC 3 cut(s) 91, 911, 1402
ApoI RAATTY 4 cut(s) 58, 197, 608, 1279
AspLEI GCGC 1 cut(s) 206
AspS9I GGNCC 1 cut(s) 979
AsuC2I CCSGG 3 cut(s) 309, 456, 457
AsuHPI GGTGA 6 cut(s) 331, 527, 889, 1192, 1227, 1399
AsuII TTCGAA 1 cut(s) 638
AvaI CYCGRG 1 cut(s) 455
AvaII GGWCC 1 cut(s) 979
BalI TGGCCA 2 cut(s) 537, 1107
BamHI GGATCC 1 cut(s) 394
BanI GGYRCC 1 cut(s) 1097
BbsI GAAGAC 2 cut(s) 135, 871
Bbv12I GWGCWC 1 cut(s) 292
BbvI GCAGC 3 cut(s) 78, 898, 1389
BccI CCATC 5 cut(s) 197, 209, 260, 536, 684
BceAI ACGGC 2 cut(s) 83, 95
BciT130I CCWGG 1 cut(s) 539
BcnI CCSGG 3 cut(s) 309, 456, 457
BfmI CTRYAG 1 cut(s) 586
BfoI RGCGCY 1 cut(s) 207
BfuAI ACCTGC 1 cut(s) 967
BisI GCNGC 8 cut(s) 92, 176, 305, 592, 912, 1003, 1403, 1425
BlpI GCTNAGC 1 cut(s) 291
BlsI GCNGC 8 cut(s) 93, 177, 306, 593, 913, 1004, 1404, 1426
Bme1390I CCNGG 4 cut(s) 309, 456, 457, 539
Bme18I GGWCC 1 cut(s) 979
BmeT110I CYCGRG 1 cut(s) 455
BmgT120I GGNCC 1 cut(s) 979
BmiI GGNNCC 3 cut(s) 396, 526, 1099
BmrFI CCNGG 4 cut(s) 309, 456, 457, 539
BmsI GCATC 5 cut(s) 361, 607, 804, 805, 1233
BpiI GAAGAC 2 cut(s) 135, 871
Bpu1102I GCTNAGC 1 cut(s) 291
Bpu14I TTCGAA 1 cut(s) 638
BpuEI CTTGAG 2 cut(s) 248, 812
BpuMI CCSGG 3 cut(s) 309, 456, 457
Bsa29I ATCGAT 1 cut(s) 545
BsaAI YACGTR 1 cut(s) 628
BsaJI CCNNGG 6 cut(s) 170, 308, 454, 455, 538, 1425
BsaWI WCCGGW 3 cut(s) 323, 730, 947
BsaXI ACNNNNNCTCC 2 cut(s) 454, 484
Bsc4I CCNNNNNNNGG 5 cut(s) 73, 94, 434, 1159, 1299
Bse1I ACTGG 4 cut(s) 43, 680, 1108, 1225
Bse3DI GCAATG 3 cut(s) 819, 1172, 1203
BseAI TCCGGA 1 cut(s) 730
BseBI CCWGG 1 cut(s) 539
BseCI ATCGAT 1 cut(s) 545
BseDI CCNNGG 6 cut(s) 170, 308, 454, 455, 538, 1425
BseGI GGATG 6 cut(s) 376, 672, 676, 847, 885, 1120
BseLI CCNNNNNNNGG 5 cut(s) 73, 94, 434, 1159, 1299
BseMI GCAATG 3 cut(s) 819, 1172, 1203
BseMII CTCAG 4 cut(s) 27, 305, 404, 1320
BseNI ACTGG 4 cut(s) 43, 680, 1108, 1225
BseRI GAGGAG 2 cut(s) 475, 717
BseXI GCAGC 3 cut(s) 78, 898, 1389
Bsh1236I CGCG 1 cut(s) 1427
Bsh1285I CGRYCG 1 cut(s) 439
BshFI GGCC 4 cut(s) 98, 175, 537, 1107
BshNI GGYRCC 1 cut(s) 1097
BshVI ATCGAT 1 cut(s) 545
BsiEI CGRYCG 1 cut(s) 439
BsiHKAI GWGCWC 1 cut(s) 292
BsiHKCI CYCGRG 1 cut(s) 455
BsiSI CCGG 8 cut(s) 308, 324, 456, 731, 889, 948, 1209, 1320
BsiWI CGTACG 1 cut(s) 432
BslFI GGGAC 2 cut(s) 385, 743
BslI CCNNNNNNNGG 5 cut(s) 73, 94, 434, 1159, 1299
BsmFI GGGAC 2 cut(s) 385, 743
BsmI GAATGC 2 cut(s) 253, 1005
BsnI GGCC 4 cut(s) 98, 175, 537, 1107
BsoBI CYCGRG 1 cut(s) 455
Bsp119I TTCGAA 1 cut(s) 638
Bsp1286I GDGCHC 1 cut(s) 292
Bsp13I TCCGGA 1 cut(s) 730
Bsp1407I TGTACA 2 cut(s) 697, 880
Bsp143I GATC 6 cut(s) 386, 394, 542, 546, 1138, 1162
Bsp1720I GCTNAGC 1 cut(s) 291
BspANI GGCC 4 cut(s) 98, 175, 537, 1107
BspCNI CTCAG 4 cut(s) 28, 304, 403, 1321
BspDI ATCGAT 1 cut(s) 545
BspEI TCCGGA 1 cut(s) 730
BspFNI CGCG 1 cut(s) 1427
BspLI GGNNCC 3 cut(s) 396, 526, 1099
BspMI ACCTGC 1 cut(s) 967
BspPI GGATC 6 cut(s) 389, 394, 402, 550, 1133, 1170
BspQI GCTCTTC 1 cut(s) 1330
BspT104I TTCGAA 1 cut(s) 638
BspT107I GGYRCC 1 cut(s) 1097
BsrDI GCAATG 3 cut(s) 819, 1172, 1203
BsrGI TGTACA 2 cut(s) 697, 880
BsrI ACTGG 4 cut(s) 43, 680, 1108, 1225
BssECI CCNNGG 6 cut(s) 170, 308, 454, 455, 538, 1425
BssMI GATC 6 cut(s) 386, 394, 542, 546, 1138, 1162
BssT1I CCWWGG 1 cut(s) 170
Bst2UI CCWGG 1 cut(s) 539
Bst4CI ACNGT 9 cut(s) 68, 144, 182, 357, 437, 748, 778, 851, 1411
Bst6I CTCTTC 1 cut(s) 1330
BstAPI GCANNNNNTGC 1 cut(s) 1097
BstAUI TGTACA 2 cut(s) 697, 880
BstBAI YACGTR 1 cut(s) 628
BstBI TTCGAA 1 cut(s) 638
BstC8I GCNNGC 2 cut(s) 96, 596
BstDEI CTNAG 5 cut(s) 36, 193, 291, 390, 1329
BstDSI CCRYGG 1 cut(s) 1425
BstF5I GGATG 6 cut(s) 376, 672, 676, 847, 885, 1120
BstFNI CGCG 1 cut(s) 1427
BstH2I RGCGCY 1 cut(s) 207
BstHHI GCGC 1 cut(s) 206
BstKTI GATC 6 cut(s) 389, 397, 545, 549, 1141, 1165
BstMBI GATC 6 cut(s) 386, 394, 542, 546, 1138, 1162
BstMCI CGRYCG 1 cut(s) 439
BstMWI GCNNNNNNNGC 6 cut(s) 88, 175, 301, 801, 1097, 1221
BstNI CCWGG 1 cut(s) 539
BstNSI RCATGY 2 cut(s) 704, 896
BstSCI CCNGG 4 cut(s) 307, 454, 455, 537
BstSFI CTRYAG 1 cut(s) 586
BstUI CGCG 1 cut(s) 1427
BstV1I GCAGC 3 cut(s) 78, 898, 1389
BstV2I GAAGAC 2 cut(s) 135, 871
BstX2I RGATCY 2 cut(s) 386, 394
BstYI RGATCY 2 cut(s) 386, 394
Bsu15I ATCGAT 1 cut(s) 545
BsuRI GGCC 4 cut(s) 98, 175, 537, 1107
BsuTUI ATCGAT 1 cut(s) 545
BtgI CCRYGG 1 cut(s) 1425
BtsCI GGATG 6 cut(s) 376, 672, 676, 847, 885, 1120
BtsIMutI CAGTG 4 cut(s) 50, 187, 353, 1218
BveI ACCTGC 1 cut(s) 967
Cac8I GCNNGC 2 cut(s) 96, 596
CaiI CAGNNNCTG 1 cut(s) 914
CfoI GCGC 1 cut(s) 206
Cfr13I GGNCC 1 cut(s) 979
Cfr42I CCGCGG 1 cut(s) 1428
Cfr9I CCCGGG 1 cut(s) 455
ClaI ATCGAT 1 cut(s) 545
CseI GACGC 1 cut(s) 1221
Csp6I GTAC 5 cut(s) 433, 698, 847, 881, 965
CviAII CATG 6 cut(s) 497, 701, 805, 893, 1087, 1350
CviQI GTAC 5 cut(s) 433, 698, 847, 881, 965
DdeI CTNAG 5 cut(s) 36, 193, 291, 390, 1329
DpnI GATC 6 cut(s) 388, 396, 544, 548, 1140, 1164
DpnII GATC 6 cut(s) 386, 394, 542, 546, 1138, 1162
DraIII CACNNNGTG 1 cut(s) 184
EaeI YGGCCR 3 cut(s) 96, 535, 1105
Eam1104I CTCTTC 1 cut(s) 1330
EarI CTCTTC 1 cut(s) 1330
EciI GGCGGA 2 cut(s) 971, 1378
Eco130I CCWWGG 1 cut(s) 170
Eco32I GATATC 1 cut(s) 467
Eco47I GGWCC 1 cut(s) 979
Eco57I CTGAAG 1 cut(s) 47
Eco88I CYCGRG 1 cut(s) 455
EcoRI GAATTC 1 cut(s) 608
EcoRII CCWGG 1 cut(s) 537
EcoRV GATATC 1 cut(s) 467
EcoT14I CCWWGG 1 cut(s) 170
ErhI CCWWGG 1 cut(s) 170
FaeI CATG 6 cut(s) 500, 704, 808, 896, 1090, 1353
FaqI GGGAC 2 cut(s) 385, 743
FatI CATG 6 cut(s) 496, 700, 804, 892, 1086, 1349
FauI CCCGC 2 cut(s) 603, 670
Fnu4HI GCNGC 8 cut(s) 92, 176, 305, 592, 912, 1003, 1403, 1425
FokI GGATG 6 cut(s) 383, 659, 663, 854, 872, 1107
Fsp4HI GCNGC 8 cut(s) 92, 176, 305, 592, 912, 1003, 1403, 1425
GlaI GCGC 1 cut(s) 205
GluI GCNGC 8 cut(s) 92, 176, 305, 592, 912, 1003, 1403, 1425
HaeII RGCGCY 1 cut(s) 207
HaeIII GGCC 4 cut(s) 98, 175, 537, 1107
HapII CCGG 8 cut(s) 308, 324, 456, 731, 889, 948, 1209, 1320
HgaI GACGC 1 cut(s) 1221
HhaI GCGC 1 cut(s) 206
Hin1II CATG 6 cut(s) 500, 704, 808, 896, 1090, 1353
Hin6I GCGC 1 cut(s) 204
HinP1I GCGC 1 cut(s) 204
HincII GTYRAC 1 cut(s) 121
HindII GTYRAC 1 cut(s) 121
HindIII AAGCTT 1 cut(s) 328
HinfI GANTC 4 cut(s) 734, 764, 1232, 1331
HpaII CCGG 8 cut(s) 308, 324, 456, 731, 889, 948, 1209, 1320
HphI GGTGA 6 cut(s) 331, 527, 889, 1192, 1227, 1399
Hpy166II GTNNAC 2 cut(s) 121, 883
Hpy188III TCNNGA 5 cut(s) 392, 731, 829, 1124, 1343
Hpy8I GTNNAC 2 cut(s) 121, 883
HpyAV CCTTC 1 cut(s) 1392
HpyCH4III ACNGT 9 cut(s) 68, 144, 182, 357, 437, 748, 778, 851, 1411
HpyCH4IV ACGT 3 cut(s) 627, 963, 1182
HpyCH4V TGCA 4 cut(s) 690, 783, 795, 1177
HpyF10VI GCNNNNNNNGC 6 cut(s) 88, 175, 301, 801, 1097, 1221
HpyF3I CTNAG 5 cut(s) 36, 193, 291, 390, 1329
HpySE526I ACGT 3 cut(s) 627, 963, 1182
Hsp92II CATG 6 cut(s) 500, 704, 808, 896, 1090, 1353
HspAI GCGC 1 cut(s) 204
Kpn2I TCCGGA 1 cut(s) 730
KspI CCGCGG 1 cut(s) 1428
Kzo9I GATC 6 cut(s) 386, 394, 542, 546, 1138, 1162
LguI GCTCTTC 1 cut(s) 1330
LmnI GCTCC 3 cut(s) 575, 664, 730
Lsp1109I GCAGC 3 cut(s) 78, 898, 1389
LweI GCATC 5 cut(s) 361, 607, 804, 805, 1233
MaeII ACGT 3 cut(s) 627, 963, 1182
MaeIII GTNAC 3 cut(s) 492, 895, 1037
MalI GATC 6 cut(s) 388, 396, 544, 548, 1140, 1164
MboI GATC 6 cut(s) 386, 394, 542, 546, 1138, 1162
MboII GAAGA 9 cut(s) 16, 140, 247, 759, 800, 876, 912, 1241, 1317
MflI RGATCY 2 cut(s) 386, 394
MhlI GDGCHC 1 cut(s) 292
MlsI TGGCCA 2 cut(s) 537, 1107
MluCI AATT 5 cut(s) 58, 197, 411, 608, 1279
MluNI TGGCCA 2 cut(s) 537, 1107
MlyI GAGTC 2 cut(s) 728, 1340
MmeI TCCRAC 4 cut(s) 190, 730, 1284, 1380
Mox20I TGGCCA 2 cut(s) 537, 1107
MroI TCCGGA 1 cut(s) 730
MscI TGGCCA 2 cut(s) 537, 1107
MseI TTAA 1 cut(s) 1277
MslI CAYNNNNRTG 3 cut(s) 803, 1085, 1125
Msp20I TGGCCA 2 cut(s) 537, 1107
MspA1I CMGCKG 2 cut(s) 911, 1427
MspI CCGG 8 cut(s) 308, 324, 456, 731, 889, 948, 1209, 1320
MspR9I CCNGG 4 cut(s) 309, 456, 457, 539
Mva1269I GAATGC 2 cut(s) 253, 1005
MvaI CCWGG 1 cut(s) 539
MvnI CGCG 1 cut(s) 1427
MwoI GCNNNNNNNGC 6 cut(s) 88, 175, 301, 801, 1097, 1221
NciI CCSGG 3 cut(s) 309, 456, 457
NdeII GATC 6 cut(s) 386, 394, 542, 546, 1138, 1162
NlaIII CATG 6 cut(s) 500, 704, 808, 896, 1090, 1353
NlaIV GGNNCC 3 cut(s) 396, 526, 1099
NmuCI GTSAC 1 cut(s) 895
NspI RCATGY 2 cut(s) 704, 896
NspV TTCGAA 1 cut(s) 638
PciI ACATGT 1 cut(s) 700
PciSI GCTCTTC 1 cut(s) 1330
PcsI WCGNNNNNNNCGW 1 cut(s) 129
PctI GAATGC 2 cut(s) 253, 1005
PfeI GAWTC 2 cut(s) 764, 1232
Pfl23II CGTACG 1 cut(s) 432
PflMI CCANNNNNTGG 1 cut(s) 1299
PkrI GCNGC 8 cut(s) 93, 177, 306, 593, 913, 1004, 1404, 1426
PleI GAGTC 2 cut(s) 728, 1339
PpsI GAGTC 2 cut(s) 728, 1339
Ppu21I YACGTR 1 cut(s) 628
PscI ACATGT 1 cut(s) 700
PsiI TTATAA 1 cut(s) 653
Psp6I CCWGG 1 cut(s) 537
PspGI CCWGG 1 cut(s) 537
PspLI CGTACG 1 cut(s) 432
PspN4I GGNNCC 3 cut(s) 396, 526, 1099
PspPI GGNCC 1 cut(s) 979
PstNI CAGNNNCTG 1 cut(s) 914
PsuI RGATCY 2 cut(s) 386, 394
PvuII CAGCTG 1 cut(s) 911
RsaI GTAC 5 cut(s) 434, 699, 848, 882, 966
RsaNI GTAC 5 cut(s) 433, 698, 847, 881, 965
RseI CAYNNNNRTG 3 cut(s) 803, 1085, 1125
SacII CCGCGG 1 cut(s) 1428
SapI GCTCTTC 1 cut(s) 1330
SaqAI TTAA 1 cut(s) 1277
SatI GCNGC 8 cut(s) 92, 176, 305, 592, 912, 1003, 1403, 1425
Sau3AI GATC 6 cut(s) 386, 394, 542, 546, 1138, 1162
Sau96I GGNCC 1 cut(s) 979
SchI GAGTC 2 cut(s) 728, 1340
ScrFI CCNGG 4 cut(s) 309, 456, 457, 539
SduI GDGCHC 1 cut(s) 292
SfaNI GCATC 5 cut(s) 361, 607, 804, 805, 1233
SfcI CTRYAG 1 cut(s) 586
Sfr303I CCGCGG 1 cut(s) 1428
SfuI TTCGAA 1 cut(s) 638
SgrBI CCGCGG 1 cut(s) 1428
SinI GGWCC 1 cut(s) 979
SmaI CCCGGG 1 cut(s) 457
SmiMI CAYNNNNRTG 3 cut(s) 803, 1085, 1125
SmlI CTYRAG 2 cut(s) 263, 827
SmoI CTYRAG 2 cut(s) 263, 827
Sse9I AATT 5 cut(s) 58, 197, 411, 608, 1279
StyD4I CCNGG 4 cut(s) 307, 454, 455, 537
StyI CCWWGG 1 cut(s) 170
TaaI ACNGT 9 cut(s) 68, 144, 182, 357, 437, 748, 778, 851, 1411
TaiI ACGT 3 cut(s) 630, 966, 1185
TaqI TCGA 4 cut(s) 439, 545, 638, 1227
TaqII GACCGA 1 cut(s) 883
TasI AATT 5 cut(s) 58, 197, 411, 608, 1279
TatI WGTACW 2 cut(s) 697, 880
TauI GCSGC 5 cut(s) 178, 307, 594, 1005, 1427
TfiI GAWTC 2 cut(s) 764, 1232
Tru1I TTAA 1 cut(s) 1277
Tru9I TTAA 1 cut(s) 1277
TscAI CASTG 4 cut(s) 50, 187, 360, 1225
TseFI GTSAC 1 cut(s) 895
TseI GCWGC 3 cut(s) 91, 911, 1402
Tsp45I GTSAC 1 cut(s) 895
TspDTI ATGAA 1 cut(s) 17
TspGWI ACGGA 2 cut(s) 138, 387
TspMI CCCGGG 1 cut(s) 455
TspRI CASTG 4 cut(s) 50, 187, 360, 1225
Van91I CCANNNNNTGG 1 cut(s) 1299
VpaK11BI GGWCC 1 cut(s) 979
XapI RAATTY 4 cut(s) 58, 197, 608, 1279
XceI RCATGY 2 cut(s) 704, 896
XmaI CCCGGG 1 cut(s) 455
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.