Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G06850 AT3G06850 |
| fragaria_vesca | FvH4_4g18561 FvH4_4g18561 FvH4_4g18561 |
| malus_domestica | MD13G1165700.v1.1 |
| prunus_persica | Prupe.1G132500_v2.0.a1 |
| pyrus_communis | pycom13g14180 pycom16g14020 |
| rosa_chinensis | RchiOBHm_Chr4g0423151 |
| rosa_multiflora | Rmu_sc0000744.1_g000002 Rmu_sc0000744.1_g000004 Rmu_sc0008829.1_g000001 Rmu_sc0027756.1_g000002 |
| rosa_roxburghii | Rroxscaffold_5G00365320 |
| rosa_rugosa | Rorug04G0184700 Rorug04G0184800 Rorug04G0184800 |
| rosa_samantha | Rh4AG244200 Rh4BG249400 Rh4CG258500 Rh4DG244100 Rh4DG244200 |
| rosa_wichuraiana | Rw4G021040 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 352 |
| AcoI | YGGCCR | 1 cut(s) | 36 |
| AcsI | RAATTY | 2 cut(s) | 21, 490 |
| AcuI | CTGAAG | 1 cut(s) | 324 |
| AgsI | TTSAA | 3 cut(s) | 269, 410, 519 |
| AluBI | AGCT | 5 cut(s) | 109, 203, 308, 344, 484 |
| AluI | AGCT | 5 cut(s) | 109, 203, 308, 344, 484 |
| Alw26I | GTCTC | 1 cut(s) | 286 |
| Ama87I | CYCGRG | 1 cut(s) | 299 |
| AoxI | GGCC | 1 cut(s) | 36 |
| ApeKI | GCWGC | 2 cut(s) | 248, 425 |
| ApoI | RAATTY | 2 cut(s) | 21, 490 |
| AvaI | CYCGRG | 1 cut(s) | 299 |
| AxyI | CCTNAGG | 1 cut(s) | 383 |
| BbsI | GAAGAC | 1 cut(s) | 90 |
| BbvI | GCAGC | 2 cut(s) | 235, 412 |
| BccI | CCATC | 3 cut(s) | 28, 206, 348 |
| BceAI | ACGGC | 1 cut(s) | 23 |
| BcoDI | GTCTC | 1 cut(s) | 286 |
| BfaI | CTAG | 2 cut(s) | 98, 294 |
| BisI | GCNGC | 2 cut(s) | 249, 426 |
| BlsI | GCNGC | 2 cut(s) | 250, 427 |
| BmeT110I | CYCGRG | 1 cut(s) | 299 |
| BmiI | GGNNCC | 2 cut(s) | 57, 158 |
| BmsI | GCATC | 1 cut(s) | 460 |
| BpiI | GAAGAC | 1 cut(s) | 90 |
| BpuEI | CTTGAG | 1 cut(s) | 307 |
| Bse21I | CCTNAGG | 1 cut(s) | 383 |
| BseMII | CTCAG | 3 cut(s) | 65, 96, 374 |
| BseRI | GAGGAG | 1 cut(s) | 330 |
| BseXI | GCAGC | 2 cut(s) | 235, 412 |
| Bsh1236I | CGCG | 1 cut(s) | 352 |
| BshFI | GGCC | 1 cut(s) | 38 |
| BsiHKCI | CYCGRG | 1 cut(s) | 299 |
| BslFI | GGGAC | 1 cut(s) | 282 |
| BsmAI | GTCTC | 1 cut(s) | 286 |
| BsmFI | GGGAC | 1 cut(s) | 282 |
| BsnI | GGCC | 1 cut(s) | 38 |
| BsoBI | CYCGRG | 1 cut(s) | 299 |
| Bsp68I | TCGCGA | 1 cut(s) | 352 |
| BspANI | GGCC | 1 cut(s) | 38 |
| BspCNI | CTCAG | 3 cut(s) | 64, 97, 375 |
| BspFNI | CGCG | 1 cut(s) | 352 |
| BspLI | GGNNCC | 2 cut(s) | 57, 158 |
| Bst4CI | ACNGT | 2 cut(s) | 376, 406 |
| BstDEI | CTNAG | 4 cut(s) | 51, 90, 105, 383 |
| BstEII | GGTNACC | 1 cut(s) | 376 |
| BstFNI | CGCG | 1 cut(s) | 352 |
| BstMAI | GTCTC | 1 cut(s) | 286 |
| BstPI | GGTNACC | 1 cut(s) | 376 |
| BstUI | CGCG | 1 cut(s) | 352 |
| BstV1I | GCAGC | 2 cut(s) | 235, 412 |
| BstV2I | GAAGAC | 1 cut(s) | 90 |
| Bsu36I | CCTNAGG | 1 cut(s) | 383 |
| BsuRI | GGCC | 1 cut(s) | 38 |
| BtgZI | GCGATG | 1 cut(s) | 367 |
| BtuMI | TCGCGA | 1 cut(s) | 352 |
| CviAII | CATG | 1 cut(s) | 421 |
| CviJI | RGCY | 7 cut(s) | 38, 109, 203, 308, 344, 425, 484 |
| CviKI_1 | RGCY | 7 cut(s) | 38, 109, 203, 308, 344, 425, 484 |
| DdeI | CTNAG | 4 cut(s) | 51, 90, 105, 383 |
| DraI | TTTAAA | 1 cut(s) | 30 |
| EaeI | YGGCCR | 1 cut(s) | 36 |
| Eco57I | CTGAAG | 1 cut(s) | 324 |
| Eco81I | CCTNAGG | 1 cut(s) | 383 |
| Eco88I | CYCGRG | 1 cut(s) | 299 |
| Eco91I | GGTNACC | 1 cut(s) | 376 |
| EcoO65I | GGTNACC | 1 cut(s) | 376 |
| FaeI | CATG | 1 cut(s) | 424 |
| FaqI | GGGAC | 1 cut(s) | 282 |
| FatI | CATG | 1 cut(s) | 420 |
| Fnu4HI | GCNGC | 2 cut(s) | 249, 426 |
| Fsp4HI | GCNGC | 2 cut(s) | 249, 426 |
| FspBI | CTAG | 2 cut(s) | 98, 294 |
| GluI | GCNGC | 2 cut(s) | 249, 426 |
| HaeIII | GGCC | 1 cut(s) | 38 |
| Hin1II | CATG | 1 cut(s) | 424 |
| HindIII | AAGCTT | 1 cut(s) | 306 |
| HinfI | GANTC | 5 cut(s) | 47, 101, 261, 347, 515 |
| Hpy188I | TCNGA | 2 cut(s) | 106, 156 |
| Hpy188III | TCNNGA | 2 cut(s) | 299, 351 |
| HpyAV | CCTTC | 3 cut(s) | 250, 285, 548 |
| HpyCH4III | ACNGT | 2 cut(s) | 376, 406 |
| HpyCH4V | TGCA | 3 cut(s) | 164, 428, 473 |
| HpyF3I | CTNAG | 4 cut(s) | 51, 90, 105, 383 |
| Hsp92II | CATG | 1 cut(s) | 424 |
| LmnI | GCTCC | 2 cut(s) | 200, 481 |
| LpnPI | CCDG | 5 cut(s) | 38, 162, 189, 266, 395 |
| Lsp1109I | GCAGC | 2 cut(s) | 235, 412 |
| LweI | GCATC | 1 cut(s) | 460 |
| MaeI | CTAG | 2 cut(s) | 98, 294 |
| MaeIII | GTNAC | 2 cut(s) | 326, 376 |
| MboII | GAAGA | 4 cut(s) | 95, 242, 332, 411 |
| MluCI | AATT | 4 cut(s) | 21, 170, 358, 490 |
| MnlI | CCTC | 5 cut(s) | 37, 156, 308, 378, 448 |
| MseI | TTAA | 2 cut(s) | 29, 224 |
| MspA1I | CMGCKG | 1 cut(s) | 344 |
| MvnI | CGCG | 1 cut(s) | 352 |
| NlaIII | CATG | 1 cut(s) | 424 |
| NlaIV | GGNNCC | 2 cut(s) | 57, 158 |
| NruI | TCGCGA | 1 cut(s) | 352 |
| PfeI | GAWTC | 5 cut(s) | 47, 101, 261, 347, 515 |
| PkrI | GCNGC | 2 cut(s) | 250, 427 |
| PspEI | GGTNACC | 1 cut(s) | 376 |
| PspN4I | GGNNCC | 2 cut(s) | 57, 158 |
| PvuII | CAGCTG | 1 cut(s) | 344 |
| RruI | TCGCGA | 1 cut(s) | 352 |
| SaqAI | TTAA | 2 cut(s) | 29, 224 |
| SatI | GCNGC | 2 cut(s) | 249, 426 |
| SetI | ASST | 9 cut(s) | 57, 111, 130, 148, 162, 205, 310, 346, 486 |
| SfaNI | GCATC | 1 cut(s) | 460 |
| SmlI | CTYRAG | 1 cut(s) | 286 |
| SmoI | CTYRAG | 1 cut(s) | 286 |
| Sse9I | AATT | 4 cut(s) | 21, 170, 358, 490 |
| SspMI | CTAG | 2 cut(s) | 98, 294 |
| TaaI | ACNGT | 2 cut(s) | 376, 406 |
| TaqI | TCGA | 1 cut(s) | 140 |
| TasI | AATT | 4 cut(s) | 21, 170, 358, 490 |
| TfiI | GAWTC | 5 cut(s) | 47, 101, 261, 347, 515 |
| Tru1I | TTAA | 2 cut(s) | 29, 224 |
| Tru9I | TTAA | 2 cut(s) | 29, 224 |
| TseI | GCWGC | 2 cut(s) | 248, 425 |
| TspDTI | ATGAA | 3 cut(s) | 17, 204, 434 |
| XapI | RAATTY | 2 cut(s) | 21, 490 |
| XspI | CTAG | 2 cut(s) | 98, 294 |