Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0005804

Physical Location & Seq

Genomic Coordinates Reverse (-)

11477289 .. 11479614

Gene Structure 2326 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2142 bp

ATGTTGTATCAATTCACCCGTGTTTCTCAACACGTCTCATGCTCTCGTCAGATGCTCCAATCTCAGAGACCGAAATCGTTCCCTGGACTTCCAGTCCTTCGCGTTTCATGTCTCAAATGGCTCTCTACCGCCGCCGCCGCCACCCAAAACCCAGAGGACAATCTCCGTACCTTCTTCACCGGCAGAATCAACCAAACCCAAACCGACTACGAGCTCGCATTGGTTTCAGCTTTAAAGTCCTGCTCTTCCCTCGCGGCCTCCTTCCAAGGCCAGCAAATCCACTCCCTTGTTCTGAAGTCAGGACTGGACTCCAACAATTTTATCAAGAACAGCCTGATTAACACGTACGCCAAATGCGGCTTCGTTGCCGACGCCGAGTCGCTGTTCGATTCTTGCTCTAAGTTGGACCCGGTGTCTTGTAATATTATGGTTGCCGGCTATGTGAAATCTGGTCGTTTGGAGAGTGCACGCCAGGTGTTTGAGAAAATGCCTGAGAAGGGATGTGTCTCATATACTACTATGATAATGGGTCTTGCCCAGAATCAGTGTTGGACCGAAGCCGCTGAGGTTTTCAGGGATATGAGGTCAGCGGGGGTGATCCCGAATGAGGTGACAATGGCGACTGTGATCTCAACTTACTCGCATTTGGGCGGTATTTGGAATAGTCGAATGCTTCATGCTCTGGTGATTAAGTTGCAGCTTGAGGGGTTTGTTCTCGTCTCTACGAATTTGCTGCACATGTATTGGGGTTGTTCGAGTGTATGCGATGCGAGAAGTTTGTTTAGTGAAATGCCTGAGAGGAATATAGTTTCGTGGAATGTCATGTTGAATGGGTATGCAAAAGCTGGGCTTATCGATTTGGCTAGAGAGTTGTTTGACAATATTCATGCAAAGGATGTGGTCTCATGGGGTACAATGATTGACGGGTATGTGCAAGTGGAGTGGTTGAGTGAAGCTTTGATGATGTATCGGGCCATGCTGCGTACTGGGCTAGGGCCGAATGATGTTATGCTTGTAGATTTGATTTCAGCTTGTGGGCGCTCTGAGGTGGTACATGAAGGTCAGCAACTTCATGGGACAATTGTAAAGGAAGGTTTTGACTGCTATGATTTTATACAGGCAACAATCATCAATTTTTATGCAGGCTGTGGCGACATGAACCTTGCTCGTCGTCAGTTTCGAAGGGGCATCAAGGAGCATGTTGCATCTTGGAATGCCCTGATTGCAGGATACATAAGAAATGGAATGATCGACCAGGCAATTGCCTTGTTTAATGAGATGCCTGAGAAAGATGTTTTTTCATGGAGTTCCATGATTTCTGGTTATGCACAGAGTGATCAACCTGAATTAGCTCTAGAACTCCTTCAAAGAATGGTAGCTACTGGGATCCAACCGAATGAAATTACGATGGTGAGTGTGTTATCTGGAATTGCTACATTAGGCACATTGGAAGAGGCAAGATGGGCACATGAATACATAATTGAAAACTCCATTCATCTCAATGACAATCTAAGTGCAGCACTCATTGATATGTATGCCAAGTGTGGGAGTATCAATACCGCCTTAGAGGTGTTCTATCAAATCCGAGATAAAACCTCAACAATCTCACCATGGAATGCCATCGTATGTGGGTTGGCCATGCACGGACATGCAAAGTTATCCCTTGAAATATTTTCAGACTTGCAAAAGCGTAATATCAAACTCAATTCAATCACATTCATCGGCGTCCTAAGTGCATGTTGCCATGCTGGCTTCGTGGAGGCTGGGGAGAGGTACTTTAAGAGCATGAAAAATGTTTACAACGTAGAACCAAATATCAAGCATTATGGTTGTATGGTGGATCTCCTTGGAAGAGCTGGCCGAGTAGGAGATGCTGAGAAAATGATAAGGAGCATGCCCATGAAGGCTGATGTAGTCATATGGGGCACGCTATTGGCGGCATGTAGAACACATGGGAATCTGGAAATAGGAGAAATGGCTGCAGAGAGTTTGACAAGGTTGCAACCATGTCATGGCCCAGTTAGAGTTCTCCTATCCAATTTATATGCAGATGCAGGGAAGTGGGAAAAAGCCTTTTCAGAGCGGCGAGCAATGCAGAGCCTAAAACTGGAGAGATCACCGGGGCACAGTGATGTTGTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016071 GO:0016556 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0046483 GO:0071704 GO:0080156 GO:0090304 GO:0090305 GO:0097159 GO:1900864 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

714

Amino Acids

79.18

Weight (kDa)

6.54

Isoelectric Point (pI)

44.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	136 - 168	2e-06	PPR repeat family
PPR	PF01535	138 - 168	1.4e-07	PPR repeat
PPR	PF01535	169 - 199	2.4e-06	PPR repeat
PPR_2	PF13041	169 - 213	1.3e-08	PPR repeat family
PPR	PF01535	270 - 296	5.3e-06	PPR repeat
PPR_2	PF13041	401 - 431	9e-08	PPR repeat family
PPR	PF01535	403 - 431	6.5e-08	PPR repeat
PPR_2	PF13041	430 - 478	2.4e-09	PPR repeat family
PPR	PF01535	433 - 462	2.2e-06	PPR repeat
PPR_2	PF13041	538 - 582	1.6e-06	PPR repeat family
E_motif	PF20431	651 - 711	1.8e-07	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005804)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G19020
fragaria_vesca	FvH4_4g14290 FvH4_4g14290 FvH4_4g14290 FvH4_4g14290 FvH4_4g14290 FvH4_4g14290 FvH4_4g14290
malus_domestica	MD13G1182300.v1.1 MD16G1182700.v1.1
prunus_persica	Prupe.1G150200_v2.0.a1
pyrus_communis	pycom13g15730
rosa_chinensis	RchiOBHm_Chr4g0418731 RchiOBHm_Chr4g0418821
rosa_laevigata	RLG00000007842
rosa_multiflora	Rmu_sc0000935.1_g000016 Rmu_sc0000935.1_g000030 Rmu_sc0006705.1_g000009 Rmu_sc0020345.1_g000005
rosa_roxburghii	Rroxscaffold_5G00361940 Rroxscaffold_5G00362000
rosa_rugosa	Rorug04G0154800 Rorug04G0154800
rosa_samantha	Rh4BG214200 Rh4CG228300 Rh4CG228600 Rh4DG215500
rosa_wichuraiana	Rw4G018430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	2012
AccBSI	CCGCTC	1 cut(s)	2083
AccII	CGCG	2 cut(s)	102, 254
AclWI	GGATC	4 cut(s)	592, 1381, 1394, 1848
AcoI	YGGCCR	2 cut(s)	1635, 1858
AcsI	RAATTY	1 cut(s)	727
AcuI	CTGAAG	1 cut(s)	314
AcyI	GRCGYC	2 cut(s)	372, 1725
AdeI	CACNNNGTG	1 cut(s)	1334
AfaI	GTAC	6 cut(s)	169, 347, 913, 985, 1053, 1775
AfiI	CCNNNNNNNGG	5 cut(s)	497, 607, 1545, 2012, 2107
AflIII	ACRYGT	3 cut(s)	31, 342, 738
AgsI	TTSAA	5 cut(s)	829, 1367, 1484, 1667, 1710
AhdI	GACNNNNNGTC	3 cut(s)	92, 376, 412
AjiI	CACGTC	1 cut(s)	34
AjnI	CCWGG	3 cut(s)	82, 471, 1254
AjuI	GAANNNNNNNTTGG	2 cut(s)	344, 376
AluBI	AGCT	9 cut(s)	214, 230, 700, 845, 956, 1031, 1352, 1379, 1856
AluI	AGCT	9 cut(s)	214, 230, 700, 845, 956, 1031, 1352, 1379, 1856
Alw21I	GWGCWC	2 cut(s)	216, 469
Alw26I	GTCTC	6 cut(s)	40, 61, 116, 511, 724, 907
Alw44I	GTGCAC	1 cut(s)	465
AlwI	GGATC	4 cut(s)	592, 1381, 1394, 1848
AoxI	GGCC	7 cut(s)	255, 268, 972, 995, 1635, 1858, 2014
ApaLI	GTGCAC	1 cut(s)	465
ApeKI	GCWGC	5 cut(s)	697, 733, 979, 1517, 1979
ApoI	RAATTY	1 cut(s)	727
Asp700I	GAANNNNTTC	2 cut(s)	77, 1362
AspLEI	GCGC	1 cut(s)	1041
AspS9I	GGNCC	5 cut(s)	406, 552, 972, 995, 2015
AsuC2I	CCSGG	2 cut(s)	410, 2121
AsuHPI	GGTGA	8 cut(s)	7, 169, 607, 622, 697, 1423, 1599, 2109
AsuII	TTCGAA	1 cut(s)	1180
AvaII	GGWCC	2 cut(s)	406, 552
BaeGI	GKGCMC	4 cut(s)	469, 1468, 1928, 2127
BalI	TGGCCA	1 cut(s)	1637
BamHI	GGATCC	1 cut(s)	1386
BanII	GRGCYC	1 cut(s)	216
Bbv12I	GWGCWC	2 cut(s)	216, 469
BbvCI	CCTCAGC	1 cut(s)	564
BbvI	GCAGC	5 cut(s)	709, 720, 966, 1529, 1966
BccI	CCATC	3 cut(s)	1402, 1455, 1628
BcgI	CGANNNNNNTGC	2 cut(s)	715, 749
BciT130I	CCWGG	3 cut(s)	84, 473, 1256
BciVI	GTATCC	1 cut(s)	1223
BclI	TGATCA	1 cut(s)	1336
BcnI	CCSGG	2 cut(s)	410, 2121
BcoDI	GTCTC	6 cut(s)	40, 61, 116, 511, 724, 907
BfaI	CTAG	3 cut(s)	864, 992, 1355
BfmI	CTRYAG	1 cut(s)	1980
BfoI	RGCGCY	1 cut(s)	1042
BfuI	GTATCC	1 cut(s)	1223
BglI	GCCNNNNNGGC	1 cut(s)	1749
Bme1390I	CCNGG	5 cut(s)	84, 410, 473, 1256, 2121
Bme18I	GGWCC	2 cut(s)	406, 552
BmeRI	GACNNNNNGTC	3 cut(s)	92, 376, 412
BmgBI	CACGTC	1 cut(s)	34
BmgT120I	GGNCC	5 cut(s)	406, 552, 972, 995, 2015
BmiI	GGNNCC	2 cut(s)	408, 1388
BmrFI	CCNGG	5 cut(s)	84, 410, 473, 1256, 2121
BmrI	ACTGGG	3 cut(s)	996, 1392, 2012
BmsI	GCATC	7 cut(s)	42, 757, 1197, 1214, 1269, 1861, 2041
BmuI	ACTGGG	3 cut(s)	996, 1392, 2012
BpmI	CTGGAG	1 cut(s)	2129
Bpu10I	CCTNAGC	1 cut(s)	564
Bpu14I	TTCGAA	1 cut(s)	1180
BpuEI	CTTGAG	1 cut(s)	722
BpuMI	CCSGG	2 cut(s)	410, 2121
Bsa29I	ATCGAT	1 cut(s)	855
BsaAI	YACGTR	1 cut(s)	345
BsaHI	GRCGYC	2 cut(s)	372, 1725
BsaI	GGTCTC	2 cut(s)	61, 907
BsaJI	CCNNGG	5 cut(s)	82, 265, 1610, 1846, 2120
Bsc4I	CCNNNNNNNGG	5 cut(s)	497, 607, 1545, 2012, 2107
Bse118I	RCCGGY	2 cut(s)	179, 434
Bse1I	ACTGG	6 cut(s)	92, 309, 991, 1387, 2018, 2112
Bse3DI	GCAATG	1 cut(s)	2097
BseBI	CCWGG	3 cut(s)	84, 473, 1256
BseCI	ATCGAT	1 cut(s)	855
BseDI	CCNNGG	5 cut(s)	82, 265, 1610, 1846, 2120
BseGI	GGATG	2 cut(s)	506, 901
BseLI	CCNNNNNNNGG	5 cut(s)	497, 607, 1545, 2012, 2107
BseMI	GCAATG	1 cut(s)	2097
BseMII	CTCAG	7 cut(s)	77, 483, 555, 786, 1035, 1275, 1866
BseNI	ACTGG	6 cut(s)	92, 309, 991, 1387, 2018, 2112
BseSI	GKGCMC	4 cut(s)	469, 1468, 1928, 2127
BseXI	GCAGC	5 cut(s)	709, 720, 966, 1529, 1966
BseYI	CCCAGC	2 cut(s)	845, 1763
BsgI	GTGCAG	2 cut(s)	719, 1536
Bsh1236I	CGCG	2 cut(s)	102, 254
BshFI	GGCC	7 cut(s)	257, 270, 974, 997, 1637, 1860, 2016
BshVI	ATCGAT	1 cut(s)	855
BsiHKAI	GWGCWC	2 cut(s)	216, 469
BsiSI	CCGG	4 cut(s)	180, 410, 435, 2120
BsiWI	CGTACG	1 cut(s)	345
BslFI	GGGAC	1 cut(s)	1090
BslI	CCNNNNNNNGG	5 cut(s)	497, 607, 1545, 2012, 2107
BsmAI	GTCTC	6 cut(s)	40, 61, 116, 511, 724, 907
BsmBI	CGTCTC	2 cut(s)	40, 724
BsmFI	GGGAC	1 cut(s)	1090
BsmI	GAATGC	3 cut(s)	675, 1219, 1621
BsnI	GGCC	7 cut(s)	257, 270, 974, 997, 1637, 1860, 2016
Bso31I	GGTCTC	2 cut(s)	61, 907
Bsp119I	TTCGAA	1 cut(s)	1180
Bsp1286I	GDGCHC	5 cut(s)	216, 469, 1468, 1928, 2127
Bsp143I	GATC	7 cut(s)	597, 627, 1248, 1336, 1386, 1840, 2114
Bsp19I	CCATGG	1 cut(s)	1610
BspANI	GGCC	7 cut(s)	257, 270, 974, 997, 1637, 1860, 2016
BspCNI	CTCAG	7 cut(s)	76, 484, 556, 787, 1036, 1276, 1867
BspDI	ATCGAT	1 cut(s)	855
BspFNI	CGCG	2 cut(s)	102, 254
BspLI	GGNNCC	2 cut(s)	408, 1388
BspMAI	CTGCAG	1 cut(s)	1984
BspPI	GGATC	4 cut(s)	592, 1381, 1394, 1848
BspQI	GCTCTTC	2 cut(s)	250, 1846
BspT104I	TTCGAA	1 cut(s)	1180
BspTNI	GGTCTC	2 cut(s)	61, 907
BsrBI	CCGCTC	1 cut(s)	2083
BsrDI	GCAATG	1 cut(s)	2097
BsrFI	RCCGGY	2 cut(s)	179, 434
BsrI	ACTGG	6 cut(s)	92, 309, 991, 1387, 2018, 2112
BssAI	RCCGGY	2 cut(s)	179, 434
BssECI	CCNNGG	5 cut(s)	82, 265, 1610, 1846, 2120
BssMI	GATC	7 cut(s)	597, 627, 1248, 1336, 1386, 1840, 2114
BssNI	GRCGYC	2 cut(s)	372, 1725
BssT1I	CCWWGG	3 cut(s)	265, 1610, 1846
Bst2UI	CCWGG	3 cut(s)	84, 473, 1256
Bst4CI	ACNGT	2 cut(s)	625, 2129
Bst6I	CTCTTC	3 cut(s)	250, 1446, 1846
BstACI	GRCGYC	2 cut(s)	372, 1725
BstBAI	YACGTR	1 cut(s)	345
BstBI	TTCGAA	1 cut(s)	1180
BstDSI	CCRYGG	1 cut(s)	1610
BstF5I	GGATG	2 cut(s)	506, 901
BstFNI	CGCG	2 cut(s)	102, 254
BstH2I	RGCGCY	1 cut(s)	1042
BstHHI	GCGC	1 cut(s)	1041
BstKTI	GATC	7 cut(s)	600, 630, 1251, 1339, 1389, 1843, 2117
BstMAI	GTCTC	6 cut(s)	40, 61, 116, 511, 724, 907
BstMBI	GATC	7 cut(s)	597, 627, 1248, 1336, 1386, 1840, 2114
BstMWI	GCNNNNNNNGC	6 cut(s)	137, 988, 1223, 1463, 1749, 2092
BstNI	CCWGG	3 cut(s)	84, 473, 1256
BstNSI	RCATGY	6 cut(s)	742, 1202, 1652, 1740, 1897, 1944
BstSCI	CCNGG	5 cut(s)	82, 408, 471, 1254, 2119
BstSFI	CTRYAG	1 cut(s)	1980
BstSLI	GKGCMC	4 cut(s)	469, 1468, 1928, 2127
BstUI	CGCG	2 cut(s)	102, 254
BstV1I	GCAGC	5 cut(s)	709, 720, 966, 1529, 1966
BstX2I	RGATCY	2 cut(s)	1386, 1840
BstYI	RGATCY	2 cut(s)	1386, 1840
Bsu15I	ATCGAT	1 cut(s)	855
BsuI	GTATCC	1 cut(s)	1223
BsuRI	GGCC	7 cut(s)	257, 270, 974, 997, 1637, 1860, 2016
BsuTUI	ATCGAT	1 cut(s)	855
BtgI	CCRYGG	1 cut(s)	1610
BtgZI	GCGATG	1 cut(s)	780
BtrI	CACGTC	1 cut(s)	34
BtsCI	GGATG	2 cut(s)	506, 901
BtsIMutI	CAGTG	2 cut(s)	551, 2134
CfoI	GCGC	1 cut(s)	1041
Cfr10I	RCCGGY	2 cut(s)	179, 434
Cfr13I	GGNCC	5 cut(s)	406, 552, 972, 995, 2015
ClaI	ATCGAT	1 cut(s)	855
CseI	GACGC	2 cut(s)	380, 1714
Csp6I	GTAC	6 cut(s)	168, 346, 912, 984, 1052, 1774
CspCI	CAANNNNNGTGG	4 cut(s)	879, 914, 923, 958
CviQI	GTAC	6 cut(s)	168, 346, 912, 984, 1052, 1774
DpnI	GATC	7 cut(s)	599, 629, 1250, 1338, 1388, 1842, 2116
DpnII	GATC	7 cut(s)	597, 627, 1248, 1336, 1386, 1840, 2114
DraI	TTTAAA	1 cut(s)	234
DraIII	CACNNNGTG	1 cut(s)	1334
DriI	GACNNNNNGTC	3 cut(s)	92, 376, 412
EaeI	YGGCCR	2 cut(s)	1635, 1858
Eam1104I	CTCTTC	3 cut(s)	250, 1446, 1846
Eam1105I	GACNNNNNGTC	3 cut(s)	92, 376, 412
EarI	CTCTTC	3 cut(s)	250, 1446, 1846
Ecl136II	GAGCTC	1 cut(s)	214
Eco130I	CCWWGG	3 cut(s)	265, 1610, 1846
Eco24I	GRGCYC	1 cut(s)	216
Eco31I	GGTCTC	2 cut(s)	61, 907
Eco47I	GGWCC	2 cut(s)	406, 552
Eco53kI	GAGCTC	1 cut(s)	214
Eco57I	CTGAAG	1 cut(s)	314
EcoICRI	GAGCTC	1 cut(s)	214
EcoRII	CCWGG	3 cut(s)	82, 471, 1254
EcoT14I	CCWWGG	3 cut(s)	265, 1610, 1846
EcoT38I	GRGCYC	1 cut(s)	216
ErhI	CCWWGG	3 cut(s)	265, 1610, 1846
Esp3I	CGTCTC	2 cut(s)	40, 724
FalI	AAGNNNNNCTT	2 cut(s)	834, 866
FaqI	GGGAC	1 cut(s)	1090
FauI	CCCGC	1 cut(s)	583
FauNDI	CATATG	1 cut(s)	1919
FbaI	TGATCA	1 cut(s)	1336
FokI	GGATG	2 cut(s)	513, 908
FriOI	GRGCYC	1 cut(s)	216
FspBI	CTAG	3 cut(s)	864, 992, 1355
GlaI	GCGC	1 cut(s)	1040
GsaI	CCCAGC	2 cut(s)	849, 1767
GsuI	CTGGAG	1 cut(s)	2129
HaeII	RGCGCY	1 cut(s)	1042
HaeIII	GGCC	7 cut(s)	257, 270, 974, 997, 1637, 1860, 2016
HapII	CCGG	4 cut(s)	180, 410, 435, 2120
HgaI	GACGC	2 cut(s)	380, 1714
HhaI	GCGC	1 cut(s)	1041
Hin1I	GRCGYC	2 cut(s)	372, 1725
Hin6I	GCGC	1 cut(s)	1039
HinP1I	GCGC	1 cut(s)	1039
HindIII	AAGCTT	1 cut(s)	954
HinfI	GANTC	6 cut(s)	186, 308, 377, 389, 541, 1957
HpaII	CCGG	4 cut(s)	180, 410, 435, 2120
HphI	GGTGA	8 cut(s)	7, 169, 607, 622, 697, 1423, 1599, 2109
Hpy166II	GTNNAC	2 cut(s)	467, 1798
Hpy188I	TCNGA	7 cut(s)	51, 66, 294, 1045, 1586, 1678, 2080
Hpy188III	TCNNGA	6 cut(s)	300, 325, 601, 1355, 1425, 1961
Hpy8I	GTNNAC	2 cut(s)	467, 1798
Hpy99I	CGWCG	2 cut(s)	374, 1173
HpyAV	CCTTC	9 cut(s)	107, 181, 271, 490, 1052, 1085, 1176, 1373, 1897
HpyCH4III	ACNGT	2 cut(s)	625, 2129
HpyCH4IV	ACGT	3 cut(s)	33, 344, 1803
HpyF10VI	GCNNNNNNNGC	6 cut(s)	137, 988, 1223, 1463, 1749, 2092
HpySE526I	ACGT	3 cut(s)	33, 344, 1803
Hsp92I	GRCGYC	2 cut(s)	372, 1725
HspAI	GCGC	1 cut(s)	1039
KroI	GCCGGC	1 cut(s)	434
KroNI	GCCGGC	1 cut(s)	436
Ksp22I	TGATCA	1 cut(s)	1336
Kzo9I	GATC	7 cut(s)	597, 627, 1248, 1336, 1386, 1840, 2114
LguI	GCTCTTC	2 cut(s)	250, 1846
LmnI	GCTCC	3 cut(s)	60, 1195, 1890
Lsp1109I	GCAGC	5 cut(s)	709, 720, 966, 1529, 1966
LweI	GCATC	7 cut(s)	42, 757, 1197, 1214, 1269, 1861, 2041
MaeI	CTAG	3 cut(s)	864, 992, 1355
MaeII	ACGT	3 cut(s)	33, 344, 1803
MaeIII	GTNAC	1 cut(s)	610
MalI	GATC	7 cut(s)	599, 629, 1250, 1338, 1388, 1842, 2116
MbiI	CCGCTC	1 cut(s)	2083
MboI	GATC	7 cut(s)	597, 627, 1248, 1336, 1386, 1840, 2114
MboII	GAAGA	4 cut(s)	166, 237, 1463, 1863
MfeI	CAATTG	2 cut(s)	1080, 1260
MflI	RGATCY	2 cut(s)	1386, 1840
MhlI	GDGCHC	5 cut(s)	216, 469, 1468, 1928, 2127
MlsI	TGGCCA	1 cut(s)	1637
MluNI	TGGCCA	1 cut(s)	1637
MlyI	GAGTC	2 cut(s)	302, 386
MmeI	TCCRAC	4 cut(s)	336, 384, 530, 1414
Mox20I	TGGCCA	1 cut(s)	1637
MroNI	GCCGGC	1 cut(s)	434
MroXI	GAANNNNTTC	2 cut(s)	77, 1362
MscI	TGGCCA	1 cut(s)	1637
MseI	TTAA	5 cut(s)	233, 339, 690, 1272, 1779
MslI	CAYNNNNRTG	5 cut(s)	1500, 1529, 1647, 1898, 2130
Msp20I	TGGCCA	1 cut(s)	1637
MspA1I	CMGCKG	2 cut(s)	563, 590
MspI	CCGG	4 cut(s)	180, 410, 435, 2120
MspR9I	CCNGG	5 cut(s)	84, 410, 473, 1256, 2121
MunI	CAATTG	2 cut(s)	1080, 1260
Mva1269I	GAATGC	3 cut(s)	675, 1219, 1621
MvaI	CCWGG	3 cut(s)	84, 473, 1256
MvnI	CGCG	2 cut(s)	102, 254
MwoI	GCNNNNNNNGC	6 cut(s)	137, 988, 1223, 1463, 1749, 2092
NaeI	GCCGGC	1 cut(s)	436
NciI	CCSGG	2 cut(s)	410, 2121
NcoI	CCATGG	1 cut(s)	1610
NdeI	CATATG	1 cut(s)	1919
NdeII	GATC	7 cut(s)	597, 627, 1248, 1336, 1386, 1840, 2114
NgoMIV	GCCGGC	1 cut(s)	434
NlaIV	GGNNCC	2 cut(s)	408, 1388
NmeAIII	GCCGAG	2 cut(s)	400, 1886
NmuCI	GTSAC	1 cut(s)	610
NspI	RCATGY	6 cut(s)	742, 1202, 1652, 1740, 1897, 1944
NspV	TTCGAA	1 cut(s)	1180
PaeI	GCATGC	1 cut(s)	1897
PciI	ACATGT	1 cut(s)	738
PciSI	GCTCTTC	2 cut(s)	250, 1846
PcsI	WCGNNNNNNNCGW	1 cut(s)	1177
PctI	GAATGC	3 cut(s)	675, 1219, 1621
PdiI	GCCGGC	1 cut(s)	436
PdmI	GAANNNNTTC	2 cut(s)	77, 1362
PfeI	GAWTC	4 cut(s)	186, 389, 541, 1957
Pfl23II	CGTACG	1 cut(s)	345
PflMI	CCANNNNNTGG	1 cut(s)	2012
PleI	GAGTC	2 cut(s)	302, 385
PpsI	GAGTC	2 cut(s)	302, 385
Ppu21I	YACGTR	1 cut(s)	345
PscI	ACATGT	1 cut(s)	738
Psp124BI	GAGCTC	1 cut(s)	216
Psp6I	CCWGG	3 cut(s)	82, 471, 1254
PspFI	CCCAGC	2 cut(s)	845, 1763
PspGI	CCWGG	3 cut(s)	82, 471, 1254
PspLI	CGTACG	1 cut(s)	345
PspN4I	GGNNCC	2 cut(s)	408, 1388
PspPI	GGNCC	5 cut(s)	406, 552, 972, 995, 2015
PstI	CTGCAG	1 cut(s)	1984
PsuI	RGATCY	2 cut(s)	1386, 1840
RsaI	GTAC	6 cut(s)	169, 347, 913, 985, 1053, 1775
RsaNI	GTAC	6 cut(s)	168, 346, 912, 984, 1052, 1774
RseI	CAYNNNNRTG	5 cut(s)	1500, 1529, 1647, 1898, 2130
SacI	GAGCTC	1 cut(s)	216
SapI	GCTCTTC	2 cut(s)	250, 1846
SaqAI	TTAA	5 cut(s)	233, 339, 690, 1272, 1779
Sau3AI	GATC	7 cut(s)	597, 627, 1248, 1336, 1386, 1840, 2114
Sau96I	GGNCC	5 cut(s)	406, 552, 972, 995, 2015
SchI	GAGTC	2 cut(s)	302, 386
ScrFI	CCNGG	5 cut(s)	84, 410, 473, 1256, 2121
SduI	GDGCHC	5 cut(s)	216, 469, 1468, 1928, 2127
SfaNI	GCATC	7 cut(s)	42, 757, 1197, 1214, 1269, 1861, 2041
SfcI	CTRYAG	1 cut(s)	1980
SfuI	TTCGAA	1 cut(s)	1180
SinI	GGWCC	2 cut(s)	406, 552
SmiMI	CAYNNNNRTG	5 cut(s)	1500, 1529, 1647, 1898, 2130
SmlI	CTYRAG	1 cut(s)	701
SmoI	CTYRAG	1 cut(s)	701
SphI	GCATGC	1 cut(s)	1897
SspI	AATATT	3 cut(s)	424, 883, 1671
SspMI	CTAG	3 cut(s)	864, 992, 1355
SstI	GAGCTC	1 cut(s)	216
StyD4I	CCNGG	5 cut(s)	82, 408, 471, 1254, 2119
StyI	CCWWGG	3 cut(s)	265, 1610, 1846
TaaI	ACNGT	2 cut(s)	625, 2129
TaiI	ACGT	3 cut(s)	36, 347, 1806
TaqI	TCGA	6 cut(s)	387, 667, 755, 855, 1180, 1251
TaqII	GACCGA	2 cut(s)	85, 569
TauI	GCSGC	8 cut(s)	134, 137, 140, 257, 360, 563, 1940, 2086
TfiI	GAWTC	4 cut(s)	186, 389, 541, 1957
Tru1I	TTAA	5 cut(s)	233, 339, 690, 1272, 1779
Tru9I	TTAA	5 cut(s)	233, 339, 690, 1272, 1779
TscAI	CASTG	2 cut(s)	551, 2134
TseFI	GTSAC	1 cut(s)	610
TseI	GCWGC	5 cut(s)	697, 733, 979, 1517, 1979
Tsp45I	GTSAC	1 cut(s)	610
TspGWI	ACGGA	2 cut(s)	155, 1659
TspRI	CASTG	2 cut(s)	551, 2134
Van91I	CCANNNNNTGG	1 cut(s)	2012
VneI	GTGCAC	1 cut(s)	465
VpaK11BI	GGWCC	2 cut(s)	406, 552
XapI	RAATTY	1 cut(s)	727
XbaI	TCTAGA	1 cut(s)	1354
XceI	RCATGY	6 cut(s)	742, 1202, 1652, 1740, 1897, 1944
XmnI	GAANNNNTTC	2 cut(s)	77, 1362
XspI	CTAG	3 cut(s)	864, 992, 1355

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.