pycom14g05110
BHLH Family

Transcription factor bHLH130-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
Physical Location & Seq
Reverse (-)
4917855 .. 4919898
2044 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom14g05110.6

Sequence Viewer

Length: 948 bp
ATGGATTCAAATACCCACCAACCCAATTCTGGGATGCTCAGATTTCGCTCCGCCCCGGGCTCCCTCCTCGCCAATTTCGCCGACGGCGGCGATTCGGGCCTTCACAGTAAAAACCCAGTTGAGGGTTCTTTGGAGTCCGAGAGATTGTTCTCCAGATTCGCGAATTACAGCCATACCAACGACTCGGATTCTTGGCCGTCGAGTTTTCAAGAATTAGACGATAAATCCGTGGTGACGGCGACGAAGGCGGCTGTGCCGGCGAGCCGGGTGAGTTCACAGGGAGGGTATTCTGGGCTGCTGCCACCTCATTATCCGAGGCAGAGCTCGTTTAATGGCGGATATGGGTTGGCGGGTTCGGGTGCAATGGAGCATCATCACACTGCGGCCAACAAGTCACTTCATTCAACTTCAAATGTTGTCAGACAAAGTAGCTCCCCAGCCGGCCTTTTCTCCAACACCTCTGTTCAAAACGGTTTCCCATTCGGAACTTGGAACAACTCATCAAATTTTCCAGAGAATATTGGTGGCCTGAAAAGAGACCATCATGATGGGAAATTATTTTCTGTTGATCAGAGCGGGGAGCTTGAAAACCGGAATCATGTATTATCCCATCACCTCAGTTTACCAAAAACTTCAGCAGAAATGGCCATGGAAAAGTTCTTGCAACTTCAAGATTCTGTACCTTGCAAAGTTAGAGCAAAGCGAGGTTGTGCCACTCATCCTCGAAGCATTGCCGAAAGAGTGAGAAGAACACGGATCAGTGAACGAATGAGGAAACTACAAGAACTTGTCCCGAACATGGACAAGCAAACCAACACGGCAGACATGCTAGATTTGGCGGTTGATTATATTAAAGATCTTCAGAAACAGTTCAAGACGCTTAGCGATGTTCGAGCAAACTGCAAGTGTTTAAACATGCAGAAGCAGGTTTCGAATCGGACCGTTTGA

Protein Analysis

316

Amino Acids

34.67

Weight (kDa)

9.26

Isoelectric Point (pI)

46.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010225)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 916
AccBSI CCGCTC 1 cut(s) 576
AccII CGCG 1 cut(s) 161
AciI CCGC 8 cut(s) 51, 87, 248, 336, 350, 383, 576, 839
AclWI GGATC 1 cut(s) 764
AcoI YGGCCR 3 cut(s) 194, 384, 645
AcsI RAATTY 1 cut(s) 505
AcuI CTGAAG 2 cut(s) 618, 845
AfaI GTAC 1 cut(s) 681
AfiI CCNNNNNNNGG 5 cut(s) 29, 30, 121, 122, 799
AgsI TTSAA 8 cut(s) 9, 209, 405, 411, 467, 587, 671, 874
AluBI AGCT 3 cut(s) 324, 432, 583
AluI AGCT 3 cut(s) 324, 432, 583
Alw21I GWGCWC 1 cut(s) 326
Alw26I GTCTC 1 cut(s) 531
AlwI GGATC 1 cut(s) 764
Ama87I CYCGRG 1 cut(s) 55
AoxI GGCC 6 cut(s) 97, 194, 384, 442, 526, 645
ApeKI GCWGC 2 cut(s) 295, 298
ApoI RAATTY 1 cut(s) 505
Asp700I GAANNNNTTC 1 cut(s) 869
AspS9I GGNCC 2 cut(s) 97, 939
AsuC2I CCSGG 3 cut(s) 56, 57, 266
AsuHPI GGTGA 3 cut(s) 244, 280, 605
AsuII TTCGAA 1 cut(s) 932
AvaI CYCGRG 1 cut(s) 55
AvaII GGWCC 1 cut(s) 939
BalI TGGCCA 1 cut(s) 647
BanII GRGCYC 2 cut(s) 62, 326
Bbv12I GWGCWC 1 cut(s) 326
BbvI GCAGC 2 cut(s) 282, 285
BccI CCATC 3 cut(s) 542, 549, 618
BceAI ACGGC 4 cut(s) 100, 181, 252, 834
BcgI CGANNNNNNTGC 2 cut(s) 882, 916
BclI TGATCA 1 cut(s) 568
BcnI CCSGG 3 cut(s) 56, 57, 266
BcoDI GTCTC 1 cut(s) 531
BfaI CTAG 1 cut(s) 830
BfuAI ACCTGC 1 cut(s) 916
BglII AGATCT 1 cut(s) 856
BisI GCNGC 5 cut(s) 88, 249, 296, 299, 384
BlpI GCTNAGC 1 cut(s) 881
BlsI GCNGC 5 cut(s) 89, 250, 297, 300, 385
Bme1390I CCNGG 3 cut(s) 56, 57, 266
Bme18I GGWCC 1 cut(s) 939
BmeT110I CYCGRG 1 cut(s) 55
BmgT120I GGNCC 2 cut(s) 97, 939
BmiI GGNNCC 1 cut(s) 61
BmrFI CCNGG 3 cut(s) 56, 57, 266
BmrI ACTGGG 1 cut(s) 110
BmsI GCATC 2 cut(s) 24, 379
BmuI ACTGGG 1 cut(s) 110
BpmI CTGGAG 1 cut(s) 136
Bpu1102I GCTNAGC 1 cut(s) 881
Bpu14I TTCGAA 1 cut(s) 932
BpuMI CCSGG 3 cut(s) 56, 57, 266
BsaI GGTCTC 1 cut(s) 531
BsaJI CCNNGG 5 cut(s) 54, 55, 228, 314, 648
BsaWI WCCGGW 1 cut(s) 591
Bsc4I CCNNNNNNNGG 5 cut(s) 29, 30, 121, 122, 799
Bse118I RCCGGY 2 cut(s) 256, 440
Bse1I ACTGG 1 cut(s) 116
Bse3DI GCAATG 2 cut(s) 369, 729
BseDI CCNNGG 5 cut(s) 54, 55, 228, 314, 648
BseGI GGATG 2 cut(s) 39, 718
BseLI CCNNNNNNNGG 5 cut(s) 29, 30, 121, 122, 799
BseMI GCAATG 2 cut(s) 369, 729
BseMII CTCAG 2 cut(s) 52, 631
BseNI ACTGG 1 cut(s) 116
BseRI GAGGAG 1 cut(s) 56
BseXI GCAGC 2 cut(s) 282, 285
BseYI CCCAGC 1 cut(s) 436
Bsh1236I CGCG 1 cut(s) 161
BshFI GGCC 6 cut(s) 99, 196, 386, 444, 528, 647
BsiHKAI GWGCWC 1 cut(s) 326
BsiHKCI CYCGRG 1 cut(s) 55
BsiSI CCGG 5 cut(s) 56, 257, 265, 441, 592
BslFI GGGAC 1 cut(s) 776
BslI CCNNNNNNNGG 5 cut(s) 29, 30, 121, 122, 799
BsmAI GTCTC 1 cut(s) 531
BsmFI GGGAC 1 cut(s) 776
BsnI GGCC 6 cut(s) 99, 196, 386, 444, 528, 647
Bso31I GGTCTC 1 cut(s) 531
BsoBI CYCGRG 1 cut(s) 55
Bsp119I TTCGAA 1 cut(s) 932
Bsp1286I GDGCHC 2 cut(s) 62, 326
Bsp143I GATC 3 cut(s) 568, 756, 856
Bsp1720I GCTNAGC 1 cut(s) 881
Bsp19I CCATGG 1 cut(s) 648
Bsp68I TCGCGA 1 cut(s) 161
BspACI CCGC 8 cut(s) 51, 87, 248, 336, 350, 383, 576, 839
BspANI GGCC 6 cut(s) 99, 196, 386, 444, 528, 647
BspCNI CTCAG 2 cut(s) 51, 630
BspFNI CGCG 1 cut(s) 161
BspHI TCATGA 1 cut(s) 544
BspLI GGNNCC 1 cut(s) 61
BspMI ACCTGC 1 cut(s) 916
BspPI GGATC 1 cut(s) 764
BspT104I TTCGAA 1 cut(s) 932
BspTNI GGTCTC 1 cut(s) 531
BsrBI CCGCTC 1 cut(s) 576
BsrDI GCAATG 2 cut(s) 369, 729
BsrFI RCCGGY 2 cut(s) 256, 440
BsrI ACTGG 1 cut(s) 116
BssAI RCCGGY 2 cut(s) 256, 440
BssECI CCNNGG 5 cut(s) 54, 55, 228, 314, 648
BssMI GATC 3 cut(s) 568, 756, 856
BssT1I CCWWGG 1 cut(s) 648
Bst4CI ACNGT 4 cut(s) 107, 473, 870, 943
BstBI TTCGAA 1 cut(s) 932
BstC8I GCNNGC 3 cut(s) 258, 262, 442
BstDEI CTNAG 3 cut(s) 38, 617, 881
BstDSI CCRYGG 2 cut(s) 228, 648
BstF5I GGATG 2 cut(s) 39, 718
BstFNI CGCG 1 cut(s) 161
BstKTI GATC 3 cut(s) 571, 759, 859
BstMAI GTCTC 1 cut(s) 531
BstMBI GATC 3 cut(s) 568, 756, 856
BstMWI GCNNNNNNNGC 5 cut(s) 77, 96, 245, 257, 644
BstNSI RCATGY 2 cut(s) 829, 919
BstSCI CCNGG 3 cut(s) 54, 55, 264
BstUI CGCG 1 cut(s) 161
BstV1I GCAGC 2 cut(s) 282, 285
BstX2I RGATCY 1 cut(s) 856
BstXI CCANNNNNNTGG 1 cut(s) 548
BstYI RGATCY 1 cut(s) 856
BsuRI GGCC 6 cut(s) 99, 196, 386, 444, 528, 647
BtgI CCRYGG 2 cut(s) 228, 648
BtgZI GCGATG 1 cut(s) 900
BtsCI GGATG 2 cut(s) 39, 718
BtsI GCAGTG 1 cut(s) 378
BtsIMutI CAGTG 2 cut(s) 378, 766
BtuMI TCGCGA 1 cut(s) 161
BveI ACCTGC 1 cut(s) 916
Cac8I GCNNGC 3 cut(s) 258, 262, 442
CciI TCATGA 1 cut(s) 544
Cfr10I RCCGGY 2 cut(s) 256, 440
Cfr13I GGNCC 2 cut(s) 97, 939
Cfr9I CCCGGG 1 cut(s) 55
CpoI CGGWCCG 1 cut(s) 939
CseI GACGC 1 cut(s) 886
Csp6I GTAC 1 cut(s) 680
CspI CGGWCCG 1 cut(s) 939
CviAII CATG 6 cut(s) 545, 599, 649, 799, 826, 916
CviQI GTAC 1 cut(s) 680
DdeI CTNAG 3 cut(s) 38, 617, 881
DpnI GATC 3 cut(s) 570, 758, 858
DpnII GATC 3 cut(s) 568, 756, 856
DraI TTTAAA 1 cut(s) 912
EaeI YGGCCR 3 cut(s) 194, 384, 645
EciI GGCGGA 2 cut(s) 40, 351
Ecl136II GAGCTC 1 cut(s) 324
Eco130I CCWWGG 1 cut(s) 648
Eco24I GRGCYC 2 cut(s) 62, 326
Eco31I GGTCTC 1 cut(s) 531
Eco47I GGWCC 1 cut(s) 939
Eco53kI GAGCTC 1 cut(s) 324
Eco57I CTGAAG 2 cut(s) 618, 845
Eco88I CYCGRG 1 cut(s) 55
EcoICRI GAGCTC 1 cut(s) 324
EcoT14I CCWWGG 1 cut(s) 648
EcoT38I GRGCYC 2 cut(s) 62, 326
ErhI CCWWGG 1 cut(s) 648
FaeI CATG 6 cut(s) 548, 602, 652, 802, 829, 919
FaiI YATR 9 cut(s) 174, 342, 546, 600, 650, 800, 827, 849, 917
FaqI GGGAC 1 cut(s) 776
FatI CATG 6 cut(s) 544, 598, 648, 798, 825, 915
FauI CCCGC 2 cut(s) 343, 569
FbaI TGATCA 1 cut(s) 568
Fnu4HI GCNGC 5 cut(s) 88, 249, 296, 299, 384
FokI GGATG 2 cut(s) 46, 705
FriOI GRGCYC 2 cut(s) 62, 326
Fsp4HI GCNGC 5 cut(s) 88, 249, 296, 299, 384
FspBI CTAG 1 cut(s) 830
GluI GCNGC 5 cut(s) 88, 249, 296, 299, 384
GsaI CCCAGC 1 cut(s) 440
GsuI CTGGAG 1 cut(s) 136
HaeIII GGCC 6 cut(s) 99, 196, 386, 444, 528, 647
HapII CCGG 5 cut(s) 56, 257, 265, 441, 592
HgaI GACGC 1 cut(s) 886
Hin1II CATG 6 cut(s) 548, 602, 652, 802, 829, 919
HinfI GANTC 9 cut(s) 5, 92, 134, 156, 182, 188, 595, 674, 934
HpaII CCGG 5 cut(s) 56, 257, 265, 441, 592
HphI GGTGA 3 cut(s) 244, 280, 605
Hpy166II GTNNAC 3 cut(s) 275, 623, 764
Hpy188I TCNGA 9 cut(s) 41, 139, 187, 315, 422, 485, 573, 864, 939
Hpy188III TCNNGA 8 cut(s) 153, 160, 209, 512, 545, 671, 793, 874
Hpy8I GTNNAC 3 cut(s) 275, 623, 764
Hpy99I CGWCG 3 cut(s) 86, 202, 244
HpyAV CCTTC 2 cut(s) 110, 238
HpyCH4III ACNGT 4 cut(s) 107, 473, 870, 943
HpyCH4V TGCA 5 cut(s) 362, 664, 687, 903, 919
HpyF10VI GCNNNNNNNGC 5 cut(s) 77, 96, 245, 257, 644
HpyF3I CTNAG 3 cut(s) 38, 617, 881
Hsp92II CATG 6 cut(s) 548, 602, 652, 802, 829, 919
KroI GCCGGC 2 cut(s) 256, 440
KroNI GCCGGC 2 cut(s) 258, 442
Ksp22I TGATCA 1 cut(s) 568
Kzo9I GATC 3 cut(s) 568, 756, 856
LmnI GCTCC 5 cut(s) 53, 65, 367, 437, 580
Lsp1109I GCAGC 2 cut(s) 282, 285
LweI GCATC 2 cut(s) 24, 379
MaeI CTAG 1 cut(s) 830
MaeIII GTNAC 2 cut(s) 232, 393
MalI GATC 3 cut(s) 570, 758, 858
MbiI CCGCTC 1 cut(s) 576
MboI GATC 3 cut(s) 568, 756, 856
MboII GAAGA 2 cut(s) 759, 851
MflI RGATCY 1 cut(s) 856
MhlI GDGCHC 2 cut(s) 62, 326
MlsI TGGCCA 1 cut(s) 647
MluCI AATT 6 cut(s) 25, 73, 163, 212, 505, 554
MluNI TGGCCA 1 cut(s) 647
MlyI GAGTC 2 cut(s) 143, 176
MmeI TCCRAC 1 cut(s) 477
Mox20I TGGCCA 1 cut(s) 647
MroNI GCCGGC 2 cut(s) 256, 440
MroXI GAANNNNTTC 1 cut(s) 869
MscI TGGCCA 1 cut(s) 647
MseI TTAA 3 cut(s) 330, 852, 911
MslI CAYNNNNRTG 1 cut(s) 546
Msp20I TGGCCA 1 cut(s) 647
MspI CCGG 5 cut(s) 56, 257, 265, 441, 592
MspR9I CCNGG 3 cut(s) 56, 57, 266
MssI GTTTAAAC 1 cut(s) 912
MvnI CGCG 1 cut(s) 161
MwoI GCNNNNNNNGC 5 cut(s) 77, 96, 245, 257, 644
NaeI GCCGGC 2 cut(s) 258, 442
NciI CCSGG 3 cut(s) 56, 57, 266
NcoI CCATGG 1 cut(s) 648
NdeII GATC 3 cut(s) 568, 756, 856
NgoMIV GCCGGC 2 cut(s) 256, 440
NlaIII CATG 6 cut(s) 548, 602, 652, 802, 829, 919
NlaIV GGNNCC 1 cut(s) 61
NmuCI GTSAC 2 cut(s) 232, 393
NruI TCGCGA 1 cut(s) 161
NspI RCATGY 2 cut(s) 829, 919
NspV TTCGAA 1 cut(s) 932
PagI TCATGA 1 cut(s) 544
PcsI WCGNNNNNNNCGW 1 cut(s) 225
PdiI GCCGGC 2 cut(s) 258, 442
PdmI GAANNNNTTC 1 cut(s) 869
PfeI GAWTC 7 cut(s) 5, 92, 156, 188, 595, 674, 934
PkrI GCNGC 5 cut(s) 89, 250, 297, 300, 385
PleI GAGTC 2 cut(s) 142, 176
PmeI GTTTAAAC 1 cut(s) 912
PpsI GAGTC 2 cut(s) 142, 176
Psp124BI GAGCTC 1 cut(s) 326
PspFI CCCAGC 1 cut(s) 436
PspN4I GGNNCC 1 cut(s) 61
PspPI GGNCC 2 cut(s) 97, 939
PsuI RGATCY 1 cut(s) 856
RruI TCGCGA 1 cut(s) 161
RsaI GTAC 1 cut(s) 681
RsaNI GTAC 1 cut(s) 680
RseI CAYNNNNRTG 1 cut(s) 546
Rsr2I CGGWCCG 1 cut(s) 939
RsrII CGGWCCG 1 cut(s) 939
SacI GAGCTC 1 cut(s) 326
SaqAI TTAA 3 cut(s) 330, 852, 911
SatI GCNGC 5 cut(s) 88, 249, 296, 299, 384
Sau3AI GATC 3 cut(s) 568, 756, 856
Sau96I GGNCC 2 cut(s) 97, 939
SchI GAGTC 2 cut(s) 143, 176
ScrFI CCNGG 3 cut(s) 56, 57, 266
SduI GDGCHC 2 cut(s) 62, 326
SetI ASST 9 cut(s) 307, 326, 434, 461, 585, 618, 685, 709, 930
SfaNI GCATC 2 cut(s) 24, 379
SfuI TTCGAA 1 cut(s) 932
SinI GGWCC 1 cut(s) 939
SmaI CCCGGG 1 cut(s) 57
SmiMI CAYNNNNRTG 1 cut(s) 546
Sse9I AATT 6 cut(s) 25, 73, 163, 212, 505, 554
SsiI CCGC 8 cut(s) 51, 87, 248, 336, 350, 383, 576, 839
SspI AATATT 1 cut(s) 520
SspMI CTAG 1 cut(s) 830
SstI GAGCTC 1 cut(s) 326
StyD4I CCNGG 3 cut(s) 54, 55, 264
StyI CCWWGG 1 cut(s) 648
TaaI ACNGT 4 cut(s) 107, 473, 870, 943
TaqI TCGA 4 cut(s) 200, 724, 892, 932
TasI AATT 6 cut(s) 25, 73, 163, 212, 505, 554
TauI GCSGC 3 cut(s) 90, 251, 386
TfiI GAWTC 7 cut(s) 5, 92, 156, 188, 595, 674, 934
Tru1I TTAA 3 cut(s) 330, 852, 911
Tru9I TTAA 3 cut(s) 330, 852, 911
TscAI CASTG 2 cut(s) 385, 766
TseFI GTSAC 2 cut(s) 232, 393
TseI GCWGC 2 cut(s) 295, 298
Tsp45I GTSAC 2 cut(s) 232, 393
TspDTI ATGAA 1 cut(s) 389
TspGWI ACGGA 2 cut(s) 217, 769
TspMI CCCGGG 1 cut(s) 55
TspRI CASTG 2 cut(s) 385, 766
VpaK11BI GGWCC 1 cut(s) 939
XapI RAATTY 1 cut(s) 505
XceI RCATGY 2 cut(s) 829, 919
XcmI CCANNNNNNNNNTGG 2 cut(s) 26, 486
XmaI CCCGGG 1 cut(s) 55
XmnI GAANNNNTTC 1 cut(s) 869
XspI CTAG 1 cut(s) 830
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.