Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0010225

Physical Location & Seq

Genomic Coordinates Forward (+)

15899873 .. 15903272

Gene Structure 3400 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0184300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1359 bp

ATGTATCCGAGAGATGACGAGAGGTTTCCAAAACCTCCTACGTCAATTTTGGGTCAATTGGACTGTGTGGGAGAGCCGCAGCCGCAGCCGCTTCAGTGTCTGCAGGGGACTCCGGTGCCGCCGTTTCTGTCCAAGACGTTTGATTTGGTGGACGACCCATCGCTGGATTTGATCATATCGTGGGGTTCTACTGGAAGAAGCTTCGTGGTTTGGGACCCTGTGGAGTTTTCGAGGCTCATCTTGCCTCGGAATTTCAAGCACAGCAATTTCTCGAGCTTTGTCCGCCAGCTTAATACTTATGGTTTTCGCAAGATCGATACAGATAAGTGGGAGTTTGCAAATGAAGCTTTCCTGAGGGGCAAAAGACATTTGTTGAAGAACATCCAGAGGCGCAAGTCATCTCAGTCCTTGCAGATTGAGAGCTTTACTGGGCCTTCTGCTGAAGCAGGAAGGCCTGGACTCGAAGGTGAGATAGAGTCACTGAGGAACCAGAGGAGTCTGTTAATGCAGGAGGTCGTTGACTTGCAACAGCAGCAGCGAGGTACAGTTCACCATATGAAAGAAGTGAATGAGAGGCTGCAGTCTGCTGAGCAGAGACAGCAGCAGATGGTTTCTTTCTTGGCCAAGGTGCTTCAAAACCCAGCATTCTTAGCCAGGCTTCAACGGAAGAAAGAACAGAAAGGTATAGGCTCTTCCTCTGGGCAGAGGAAATTTGTTAAGGCGCGTGAACGTGAACCAGGTAGATCTGATTCTTATGTGGAAGGGCAAATTGTGAAGTACGAACCTGCTTGGAGAAACCATACCATGTCGTCTGCAGTCCCATATGTAAATCCAGTTCCTATTGAAAACTCTCCAGATCATGGTATGCCATTTCAATTTGAGAATATTGCATTTGATGGGTTAATGGTCTCGGATGAACTAGAAGTAACACCAGAGCAAGAGGGTGAAGGGGCATCAAGCATGGTAATTGAAGATCCACTTTCCAAAGGCAAGAGTGTTGTGACCCAACAACAAGAGGTTAATCCCGAGCCTTACATCTCCTTCCAGGAGGATTTGATGAAGGAGAGGAGTACTTTTGAGGAACTCTCATTTCCAGGGATTGAGAGCATGGTTAAACCAGATGATGTATGGAGTATGGGTTTTGATGCCAGTGCTGGTATGTCAAGTTCTAGCAGTGGGTTTTGGAGTAATCCGATCAACTGTGATATGCCAGAGATGGGAATCCCAGACGGATTGTTTGATATCTGGGACATAGGAGCACTGCAAGCAGCAGGAGGGTCTGGCATTGATAAGTGGCCAGCTGATGAATCTGCATTCGATGAGCGTGCAAGTCAAGATGAACTGCCAAAAGATGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000976 GO:0000981 GO:0001046 GO:0001047 GO:0001067 GO:0001228 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009416 GO:0009628 GO:0009648 GO:0009791 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010228 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0022414 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048518 GO:0048522 GO:0048573 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0061458 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0097659 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HLH

Protein Analysis

452

Amino Acids

50.91

Weight (kDa)

4.88

Isoelectric Point (pI)

60.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HSF_DNA-bind	PF00447	42 - 131	1.3e-28	HSF-type DNA-binding

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010225)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G42280 AT2G42280 AT2G42280
fragaria_vesca	FvH4_6g22880 FvH4_6g22880
malus_domestica	MD12G1062600.v1.1 MD14G1063300.v1.1
prunus_persica	Prupe.7G071500_v2.0.a1
pyrus_communis	pycom12g05530 pycom14g05110
rosa_chinensis	RchiOBHm_Chr3g0480621
rosa_laevigata	RLG00000023464
rosa_multiflora	Rmu_sc0002752.1_g000005
rosa_roxburghii	Rroxscaffold_6G00401200
rosa_rugosa	Rorug03G0184300 Rorug03G0184400
rosa_samantha	Rh3AG236500 Rh3BG269400 Rh3CG266100 Rh3DG261900
rosa_wichuraiana	Rw3G021190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	793
AccB1I	GGYRCC	1 cut(s)	115
AccB7I	CCANNNNNTGG	1 cut(s)	860
AccII	CGCG	1 cut(s)	724
AciI	CCGC	5 cut(s)	77, 83, 89, 119, 283
AclWI	GGATC	1 cut(s)	968
AcoI	YGGCCR	2 cut(s)	621, 1295
AcsI	RAATTY	2 cut(s)	250, 710
AcuI	CTGAAG	2 cut(s)	77, 462
AfaI	GTAC	3 cut(s)	544, 779, 1072
AfiI	CCNNNNNNNGG	3 cut(s)	163, 860, 1217
AgsI	TTSAA	7 cut(s)	256, 376, 635, 662, 845, 875, 971
AjnI	CCWGG	5 cut(s)	454, 653, 736, 1044, 1093
AluBI	AGCT	6 cut(s)	201, 276, 289, 347, 423, 1301
AluI	AGCT	6 cut(s)	201, 276, 289, 347, 423, 1301
Alw21I	GWGCWC	1 cut(s)	1261
Alw26I	GTCTC	2 cut(s)	589, 913
AlwI	GGATC	1 cut(s)	968
AlwNI	CAGNNNCTG	1 cut(s)	100
Ama87I	CYCGRG	2 cut(s)	271, 1025
AoxI	GGCC	4 cut(s)	431, 452, 621, 1295
ApeKI	GCWGC	7 cut(s)	79, 85, 532, 535, 577, 601, 1268
ApoI	RAATTY	2 cut(s)	250, 710
ArsI	GACNNNNNNTTYG	4 cut(s)	127, 159, 1220, 1252
AspLEI	GCGC	2 cut(s)	393, 724
AspS9I	GGNCC	2 cut(s)	214, 431
AsuHPI	GGTGA	3 cut(s)	479, 542, 956
AvaI	CYCGRG	2 cut(s)	271, 1025
AvaII	GGWCC	1 cut(s)	214
AxyI	CCTNAGG	1 cut(s)	353
BalI	TGGCCA	2 cut(s)	623, 1297
BanI	GGYRCC	1 cut(s)	115
BarI	GAAGNNNNNNTAC	2 cut(s)	676, 708
Bbv12I	GWGCWC	1 cut(s)	1261
BbvI	GCAGC	7 cut(s)	91, 97, 544, 547, 564, 613, 1280
BccI	CCATC	4 cut(s)	166, 601, 890, 1210
BceAI	ACGGC	1 cut(s)	106
BcgI	CGANNNNNNTGC	2 cut(s)	1307, 1341
BciT130I	CCWGG	5 cut(s)	456, 655, 738, 1046, 1095
BciVI	GTATCC	1 cut(s)	15
BclI	TGATCA	1 cut(s)	171
BcoDI	GTCTC	2 cut(s)	589, 913
BfaI	CTAG	2 cut(s)	920, 1170
BfmI	CTRYAG	3 cut(s)	101, 578, 813
BfuAI	ACCTGC	1 cut(s)	793
BfuI	GTATCC	1 cut(s)	15
BglII	AGATCT	1 cut(s)	743
BlpI	GCTNAGC	1 cut(s)	588
BmcAI	AGTACT	1 cut(s)	1072
Bme1390I	CCNGG	5 cut(s)	456, 655, 738, 1046, 1095
Bme18I	GGWCC	1 cut(s)	214
BmeT110I	CYCGRG	2 cut(s)	271, 1025
BmgT120I	GGNCC	2 cut(s)	214, 431
BmiI	GGNNCC	4 cut(s)	117, 215, 216, 488
BmrFI	CCNGG	5 cut(s)	456, 655, 738, 1046, 1095
BmrI	ACTGGG	1 cut(s)	438
BmsI	GCATC	2 cut(s)	962, 1135
BmuI	ACTGGG	1 cut(s)	438
BplI	GAGNNNNNCTC	2 cut(s)	1070, 1102
BpmI	CTGGAG	1 cut(s)	837
Bpu1102I	GCTNAGC	1 cut(s)	588
Bsa29I	ATCGAT	1 cut(s)	315
BsaBI	GATNNNNATC	1 cut(s)	1220
BsaI	GGTCTC	1 cut(s)	913
BsaJI	CCNNGG	3 cut(s)	245, 624, 1094
BsaWI	WCCGGW	1 cut(s)	112
BsaXI	ACNNNNNCTCC	2 cut(s)	1123, 1153
Bsc4I	CCNNNNNNNGG	3 cut(s)	163, 860, 1217
Bse1I	ACTGG	4 cut(s)	196, 433, 833, 1149
Bse21I	CCTNAGG	1 cut(s)	353
Bse8I	GATNNNNATC	1 cut(s)	1220
BseBI	CCWGG	5 cut(s)	456, 655, 738, 1046, 1095
BseCI	ATCGAT	1 cut(s)	315
BseDI	CCNNGG	3 cut(s)	245, 624, 1094
BseGI	GGATG	2 cut(s)	381, 919
BseJI	GATNNNNATC	1 cut(s)	1220
BseLI	CCNNNNNNNGG	3 cut(s)	163, 860, 1217
BseMII	CTCAG	4 cut(s)	344, 416, 473, 579
BseNI	ACTGG	4 cut(s)	196, 433, 833, 1149
BseRI	GAGGAG	2 cut(s)	508, 1081
BseXI	GCAGC	7 cut(s)	91, 97, 544, 547, 564, 613, 1280
BseYI	CCCAGC	1 cut(s)	640
Bsh1236I	CGCG	1 cut(s)	724
BshFI	GGCC	4 cut(s)	433, 454, 623, 1297
BshNI	GGYRCC	1 cut(s)	115
BshVI	ATCGAT	1 cut(s)	315
BsiHKAI	GWGCWC	1 cut(s)	1261
BsiHKCI	CYCGRG	2 cut(s)	271, 1025
BsiSI	CCGG	1 cut(s)	113
BslFI	GGGAC	4 cut(s)	121, 227, 803, 1262
BslI	CCNNNNNNNGG	3 cut(s)	163, 860, 1217
BsmAI	GTCTC	2 cut(s)	589, 913
BsmFI	GGGAC	4 cut(s)	121, 227, 803, 1262
BsmI	GAATGC	2 cut(s)	644, 1313
BsnI	GGCC	4 cut(s)	433, 454, 623, 1297
Bso31I	GGTCTC	1 cut(s)	913
BsoBI	CYCGRG	2 cut(s)	271, 1025
Bsp1286I	GDGCHC	1 cut(s)	1261
Bsp143I	GATC	6 cut(s)	171, 312, 743, 856, 973, 1194
Bsp1720I	GCTNAGC	1 cut(s)	588
BspACI	CCGC	5 cut(s)	77, 83, 89, 119, 283
BspANI	GGCC	4 cut(s)	433, 454, 623, 1297
BspCNI	CTCAG	4 cut(s)	345, 415, 474, 580
BspDI	ATCGAT	1 cut(s)	315
BspFNI	CGCG	1 cut(s)	724
BspLI	GGNNCC	4 cut(s)	117, 215, 216, 488
BspMAI	CTGCAG	3 cut(s)	105, 582, 817
BspMI	ACCTGC	1 cut(s)	793
BspPI	GGATC	1 cut(s)	968
BspQI	GCTCTTC	1 cut(s)	697
BspT107I	GGYRCC	1 cut(s)	115
BspTNI	GGTCTC	1 cut(s)	913
BsrI	ACTGG	4 cut(s)	196, 433, 833, 1149
BssECI	CCNNGG	3 cut(s)	245, 624, 1094
BssMI	GATC	6 cut(s)	171, 312, 743, 856, 973, 1194
BssT1I	CCWWGG	1 cut(s)	624
Bst2UI	CCWGG	5 cut(s)	456, 655, 738, 1046, 1095
Bst4CI	ACNGT	3 cut(s)	65, 547, 1202
Bst6I	CTCTTC	1 cut(s)	697
BstC8I	GCNNGC	4 cut(s)	287, 1266, 1299, 1326
BstDEI	CTNAG	5 cut(s)	353, 402, 482, 588, 649
BstF5I	GGATG	2 cut(s)	381, 919
BstFNI	CGCG	1 cut(s)	724
BstHHI	GCGC	2 cut(s)	393, 724
BstKTI	GATC	6 cut(s)	174, 315, 746, 859, 976, 1197
BstMAI	GTCTC	2 cut(s)	589, 913
BstMBI	GATC	6 cut(s)	171, 312, 743, 856, 973, 1194
BstNI	CCWGG	5 cut(s)	456, 655, 738, 1046, 1095
BstSCI	CCNGG	5 cut(s)	454, 653, 736, 1044, 1093
BstSFI	CTRYAG	3 cut(s)	101, 578, 813
BstUI	CGCG	1 cut(s)	724
BstV1I	GCAGC	7 cut(s)	91, 97, 544, 547, 564, 613, 1280
BstX2I	RGATCY	2 cut(s)	743, 973
BstYI	RGATCY	2 cut(s)	743, 973
Bsu15I	ATCGAT	1 cut(s)	315
Bsu36I	CCTNAGG	1 cut(s)	353
BsuI	GTATCC	1 cut(s)	15
BsuRI	GGCC	4 cut(s)	433, 454, 623, 1297
BsuTUI	ATCGAT	1 cut(s)	315
BtgZI	GCGATG	1 cut(s)	144
BtsCI	GGATG	2 cut(s)	381, 919
BtsI	GCAGTG	2 cut(s)	1180, 1259
BtsIMutI	CAGTG	5 cut(s)	101, 479, 1156, 1180, 1259
BveI	ACCTGC	1 cut(s)	793
Cac8I	GCNNGC	4 cut(s)	287, 1266, 1299, 1326
CaiI	CAGNNNCTG	1 cut(s)	100
CfoI	GCGC	2 cut(s)	393, 724
Cfr13I	GGNCC	2 cut(s)	214, 431
ClaI	ATCGAT	1 cut(s)	315
CsiI	ACCWGGT	1 cut(s)	736
Csp6I	GTAC	3 cut(s)	543, 778, 1071
CviAII	CATG	4 cut(s)	805, 860, 961, 1108
CviQI	GTAC	3 cut(s)	543, 778, 1071
DdeI	CTNAG	5 cut(s)	353, 402, 482, 588, 649
DpnI	GATC	6 cut(s)	173, 314, 745, 858, 975, 1196
DpnII	GATC	6 cut(s)	171, 312, 743, 856, 973, 1194
EaeI	YGGCCR	2 cut(s)	621, 1295
Eam1104I	CTCTTC	1 cut(s)	697
EarI	CTCTTC	1 cut(s)	697
EciI	GGCGGA	1 cut(s)	272
Eco130I	CCWWGG	1 cut(s)	624
Eco147I	AGGCCT	1 cut(s)	454
Eco31I	GGTCTC	1 cut(s)	913
Eco32I	GATATC	1 cut(s)	1243
Eco47I	GGWCC	1 cut(s)	214
Eco57I	CTGAAG	2 cut(s)	77, 462
Eco81I	CCTNAGG	1 cut(s)	353
Eco88I	CYCGRG	2 cut(s)	271, 1025
EcoO109I	RGGNCCY	1 cut(s)	214
EcoRII	CCWGG	5 cut(s)	454, 653, 736, 1044, 1093
EcoRV	GATATC	1 cut(s)	1243
EcoT14I	CCWWGG	1 cut(s)	624
ErhI	CCWWGG	1 cut(s)	624
FaeI	CATG	4 cut(s)	808, 863, 964, 1111
FalI	AAGNNNNNCTT	2 cut(s)	963, 995
FaqI	GGGAC	4 cut(s)	121, 227, 803, 1262
FatI	CATG	4 cut(s)	804, 859, 960, 1107
FauNDI	CATATG	2 cut(s)	555, 823
FbaI	TGATCA	1 cut(s)	171
FokI	GGATG	2 cut(s)	368, 926
FspBI	CTAG	2 cut(s)	920, 1170
GlaI	GCGC	2 cut(s)	392, 723
GsaI	CCCAGC	1 cut(s)	644
GsuI	CTGGAG	1 cut(s)	837
HaeIII	GGCC	4 cut(s)	433, 454, 623, 1297
HapII	CCGG	1 cut(s)	113
HhaI	GCGC	2 cut(s)	393, 724
Hin1II	CATG	4 cut(s)	808, 863, 964, 1111
Hin6I	GCGC	2 cut(s)	391, 722
HinP1I	GCGC	2 cut(s)	391, 722
HincII	GTYRAC	1 cut(s)	520
HindII	GTYRAC	1 cut(s)	520
HindIII	AAGCTT	2 cut(s)	199, 345
HinfI	GANTC	7 cut(s)	109, 459, 476, 496, 749, 1221, 1307
HpaII	CCGG	1 cut(s)	113
HphI	GGTGA	3 cut(s)	479, 542, 956
Hpy166II	GTNNAC	5 cut(s)	151, 520, 550, 728, 734
Hpy188I	TCNGA	5 cut(s)	9, 249, 748, 913, 1194
Hpy188III	TCNNGA	6 cut(s)	271, 352, 385, 854, 1025, 1334
Hpy8I	GTNNAC	5 cut(s)	151, 520, 550, 728, 734
HpyAV	CCTTC	7 cut(s)	444, 444, 458, 755, 941, 1051, 1054
HpyCH4III	ACNGT	3 cut(s)	65, 547, 1202
HpyCH4IV	ACGT	3 cut(s)	41, 137, 730
HpyF3I	CTNAG	5 cut(s)	353, 402, 482, 588, 649
HpySE526I	ACGT	3 cut(s)	41, 137, 730
Hsp92II	CATG	4 cut(s)	808, 863, 964, 1111
HspAI	GCGC	2 cut(s)	391, 722
KflI	GGGWCCC	1 cut(s)	214
Ksp22I	TGATCA	1 cut(s)	171
Kzo9I	GATC	6 cut(s)	171, 312, 743, 856, 973, 1194
LguI	GCTCTTC	1 cut(s)	697
LmnI	GCTCC	1 cut(s)	1256
Lsp1109I	GCAGC	7 cut(s)	91, 97, 544, 547, 564, 613, 1280
LweI	GCATC	2 cut(s)	962, 1135
MabI	ACCWGGT	1 cut(s)	736
MaeI	CTAG	2 cut(s)	920, 1170
MaeII	ACGT	3 cut(s)	41, 137, 730
MaeIII	GTNAC	3 cut(s)	477, 925, 1000
MalI	GATC	6 cut(s)	173, 314, 745, 858, 975, 1196
MboI	GATC	6 cut(s)	171, 312, 743, 856, 973, 1194
MboII	GAAGA	5 cut(s)	207, 388, 679, 684, 983
MfeI	CAATTG	1 cut(s)	56
MflI	RGATCY	2 cut(s)	743, 973
MhlI	GDGCHC	1 cut(s)	1261
MlsI	TGGCCA	2 cut(s)	623, 1297
MluCI	AATT	8 cut(s)	45, 56, 250, 265, 710, 768, 875, 966
MluNI	TGGCCA	2 cut(s)	623, 1297
MlyI	GAGTC	4 cut(s)	103, 453, 485, 505
Mox20I	TGGCCA	2 cut(s)	623, 1297
MscI	TGGCCA	2 cut(s)	623, 1297
MseI	TTAA	6 cut(s)	291, 503, 717, 902, 1020, 1113
Msp20I	TGGCCA	2 cut(s)	623, 1297
MspA1I	CMGCKG	1 cut(s)	1301
MspI	CCGG	1 cut(s)	113
MspR9I	CCNGG	5 cut(s)	456, 655, 738, 1046, 1095
MunI	CAATTG	1 cut(s)	56
Mva1269I	GAATGC	2 cut(s)	644, 1313
MvaI	CCWGG	5 cut(s)	456, 655, 738, 1046, 1095
MvnI	CGCG	1 cut(s)	724
NdeI	CATATG	2 cut(s)	555, 823
NdeII	GATC	6 cut(s)	171, 312, 743, 856, 973, 1194
NlaIII	CATG	4 cut(s)	808, 863, 964, 1111
NlaIV	GGNNCC	4 cut(s)	117, 215, 216, 488
NmuCI	GTSAC	2 cut(s)	477, 1000
PaeR7I	CTCGAG	1 cut(s)	271
PceI	AGGCCT	1 cut(s)	454
PciSI	GCTCTTC	1 cut(s)	697
PctI	GAATGC	2 cut(s)	644, 1313
PfeI	GAWTC	3 cut(s)	749, 1221, 1307
PflMI	CCANNNNNTGG	1 cut(s)	860
PfoI	TCCNGGA	1 cut(s)	1044
PleI	GAGTC	4 cut(s)	103, 453, 484, 504
PpsI	GAGTC	4 cut(s)	103, 453, 484, 504
PpuMI	RGGWCCY	1 cut(s)	214
Psp5II	RGGWCCY	1 cut(s)	214
Psp6I	CCWGG	5 cut(s)	454, 653, 736, 1044, 1093
PspFI	CCCAGC	1 cut(s)	640
PspGI	CCWGG	5 cut(s)	454, 653, 736, 1044, 1093
PspN4I	GGNNCC	4 cut(s)	117, 215, 216, 488
PspPI	GGNCC	2 cut(s)	214, 431
PspPPI	RGGWCCY	1 cut(s)	214
PsrI	GAACNNNNNNTAC	4 cut(s)	819, 851, 1150, 1182
PstI	CTGCAG	3 cut(s)	105, 582, 817
PstNI	CAGNNNCTG	1 cut(s)	100
PsuI	RGATCY	2 cut(s)	743, 973
PvuII	CAGCTG	1 cut(s)	1301
RsaI	GTAC	3 cut(s)	544, 779, 1072
RsaNI	GTAC	3 cut(s)	543, 778, 1071
SapI	GCTCTTC	1 cut(s)	697
SaqAI	TTAA	6 cut(s)	291, 503, 717, 902, 1020, 1113
Sau3AI	GATC	6 cut(s)	171, 312, 743, 856, 973, 1194
Sau96I	GGNCC	2 cut(s)	214, 431
ScaI	AGTACT	1 cut(s)	1072
SchI	GAGTC	4 cut(s)	103, 453, 485, 505
ScrFI	CCNGG	5 cut(s)	456, 655, 738, 1046, 1095
SduI	GDGCHC	1 cut(s)	1261
SexAI	ACCWGGT	1 cut(s)	736
SfaNI	GCATC	2 cut(s)	962, 1135
SfcI	CTRYAG	3 cut(s)	101, 578, 813
Sfr274I	CTCGAG	1 cut(s)	271
SinI	GGWCC	1 cut(s)	214
SlaI	CTCGAG	1 cut(s)	271
SmlI	CTYRAG	1 cut(s)	271
SmoI	CTYRAG	1 cut(s)	271
Sse9I	AATT	8 cut(s)	45, 56, 250, 265, 710, 768, 875, 966
SseBI	AGGCCT	1 cut(s)	454
SsiI	CCGC	5 cut(s)	77, 83, 89, 119, 283
SspI	AATATT	1 cut(s)	886
SspMI	CTAG	2 cut(s)	920, 1170
StuI	AGGCCT	1 cut(s)	454
StyD4I	CCNGG	5 cut(s)	454, 653, 736, 1044, 1093
StyI	CCWWGG	1 cut(s)	624
TaaI	ACNGT	3 cut(s)	65, 547, 1202
TaiI	ACGT	3 cut(s)	44, 140, 733
TaqI	TCGA	5 cut(s)	230, 272, 315, 462, 1317
TasI	AATT	8 cut(s)	45, 56, 250, 265, 710, 768, 875, 966
TatI	WGTACW	1 cut(s)	1070
TauI	GCSGC	4 cut(s)	79, 85, 91, 121
TfiI	GAWTC	3 cut(s)	749, 1221, 1307
Tru1I	TTAA	6 cut(s)	291, 503, 717, 902, 1020, 1113
Tru9I	TTAA	6 cut(s)	291, 503, 717, 902, 1020, 1113
TscAI	CASTG	5 cut(s)	101, 486, 1156, 1180, 1266
TseFI	GTSAC	2 cut(s)	477, 1000
TseI	GCWGC	7 cut(s)	79, 85, 532, 535, 577, 601, 1268
Tsp45I	GTSAC	2 cut(s)	477, 1000
TspDTI	ATGAA	6 cut(s)	357, 572, 930, 1073, 1320, 1353
TspGWI	ACGGA	2 cut(s)	679, 1245
TspRI	CASTG	5 cut(s)	101, 486, 1156, 1180, 1266
Van91I	CCANNNNNTGG	1 cut(s)	860
VpaK11BI	GGWCC	1 cut(s)	214
XapI	RAATTY	2 cut(s)	250, 710
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1125
XhoI	CTCGAG	1 cut(s)	271
XspI	CTAG	2 cut(s)	920, 1170
ZrmI	AGTACT	1 cut(s)	1072

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.